The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	27282	70036	4104288	tRNA,transposase	Synechococcus_phage(50.0%)	41	NA	NA
WP_010929577.1|27282_28233_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_019247164.1|29141_30359_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|32214_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|34625_35576_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|37012_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41318_42212_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_010929588.1|43663_44614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|45200_45749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45720_45957_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46084_46978_+	AEC family transporter	NA	NA	NA	NA	NA
WP_010929590.1|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|50141_51092_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|51134_52391_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|54362_54953_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|54977_55667_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|57497_58448_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|59248_60475_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_047122776.1|60474_60888_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|61077_62019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248755.1|62442_63417_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929599.1|63473_64055_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010929600.1|64067_64370_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|64488_65547_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|65581_66853_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|67482_68664_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929584.1|69085_70036_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	77634	136108	4104288	tRNA,transposase	Planktothrix_phage(22.22%)	54	NA	NA
WP_005012067.1|77634_78585_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|78659_79604_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929608.1|79600_81475_-	O-antigen biosynthesis protein WlbL	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
WP_003807102.1|82822_83527_-	O-antigen biosynthesis protein WlbI	NA	NA	NA	NA	NA
WP_010929609.1|83523_84696_-	O-antigen biosynthesis protein WlbH	NA	NA	NA	NA	NA
WP_010929610.1|84891_85485_-	O-antigen biosynthesis protein WlbG	NA	NA	NA	NA	NA
WP_010929611.1|85481_86714_-	O-antigen biosynthesis protein WlbF	NA	NA	NA	NA	NA
WP_010929612.1|86731_87991_-	O-antigen biosynthesis protein WlbE	NA	NA	NA	NA	NA
WP_010929613.1|88014_89103_-	O-antigen biosynthesis protein WlbD	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
WP_010929614.1|89110_90211_-	O-antigen biosynthesis protein WlbC	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
WP_003807114.1|90214_90790_-	O-antigen biosynthesis protein WlbB	NA	NA	NA	NA	NA
WP_003807115.1|90793_91846_-	O-antigen biosynthesis protein WlbA	NA	NA	NA	NA	NA
WP_010929615.1|91976_92984_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
WP_010929616.1|92985_94272_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_003807124.1|94288_94444_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929617.1|94468_95272_-	type III pantothenate kinase	NA	NA	NA	NA	NA
WP_010929618.1|95268_96135_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_010929619.1|96209_97340_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003807131.1|97339_98179_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
WP_010929620.1|99111_99714_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010929621.1|99743_100397_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003807138.1|100529_101786_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
WP_010929622.1|101833_102733_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_003818417.1|102808_103084_+	YbeD family protein	NA	NA	NA	NA	NA
WP_010929623.1|103091_103754_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_003807146.1|103815_104817_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_003807148.1|104831_105380_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
WP_010929624.1|105437_106334_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_010929625.1|106330_107392_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
WP_010929626.1|107427_108378_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|109277_110471_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|110552_111182_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|111243_111927_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|111936_113619_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|113906_114254_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|114344_114662_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|114944_115961_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|116036_116837_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|116833_117709_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|117719_119012_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|119054_120095_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|120200_121022_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|121122_122073_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905488.1|122171_123077_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
WP_003815918.1|123073_123907_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010929637.1|124743_125754_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_019247800.1|125750_126140_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929638.1|127033_128287_+	amidase	NA	NA	NA	NA	NA
WP_010929639.1|128377_130078_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_010929640.1|130504_131152_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853393.1|131150_132590_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_003815905.1|132682_132985_+	bacterioferritin-associated ferredoxin	NA	NA	NA	NA	NA
WP_010929512.1|133012_133891_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|135157_136108_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	164893	225404	4104288	tRNA,transposase,protease	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	51	NA	NA
WP_005015810.1|164893_165844_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|167287_168190_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|168167_168797_-	LemA family protein	NA	NA	NA	NA	NA
WP_010929660.1|169079_170510_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.8	5.8e-44
WP_010929661.1|170543_171173_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|171221_172829_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|172853_173537_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|173618_174095_-	bacterioferritin	NA	NA	NA	NA	NA
WP_010929591.1|174301_175252_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929664.1|176367_176895_+	META domain-containing protein	NA	NA	NA	NA	NA
WP_010929665.1|176986_177802_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_003808370.1|177862_178597_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010929666.1|178634_180713_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|180962_181235_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446322.1|181336_182422_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|182425_184330_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_014486044.1|184326_188001_+	translocation/assembly module TamB domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|188061_188625_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|188632_189055_-	VOC family protein	NA	NA	NA	NA	NA
WP_010929671.1|189082_189502_-	VOC family protein	NA	NA	NA	NA	NA
WP_076879599.1|189530_190004_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	31.1	2.2e-11
WP_003808391.1|190103_190601_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|190755_193026_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_010929672.1|193074_194307_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929591.1|194405_195356_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929673.1|195458_196094_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.8e-83
WP_019248671.1|196090_196984_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|197378_198479_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|198560_198935_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|198994_201859_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|202003_202744_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|202813_204025_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|204053_205022_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931070.1|205635_206586_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|206742_207066_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_023853200.1|207170_208211_-	cyclase family protein	NA	NA	NA	NA	NA
WP_010929697.1|208216_208996_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|209041_209338_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|209363_209639_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|209695_210340_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|210339_211026_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010929695.1|211155_212007_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|212057_212783_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|212814_214164_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|214275_215208_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033455792.1|215665_218461_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_010929690.1|219054_221997_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|222068_222788_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|222826_223375_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|223529_224429_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|224453_225404_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	233336	286924	4104288	tRNA,transposase,protease	Bacillus_phage(25.0%)	48	NA	NA
WP_005012067.1|233336_234287_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|234373_235324_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|235320_236271_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929700.1|236369_237167_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003814363.1|238116_238527_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_003814358.1|239548_240292_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814356.1|240335_241379_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814355.1|241549_243652_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814351.1|245062_246019_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929701.1|246037_246529_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_010929702.1|246525_247881_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929703.1|247881_248580_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929704.1|248576_249278_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_003814339.1|249530_250580_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_003814337.1|250685_251627_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|251623_253513_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814332.1|253599_254238_+	VTT domain-containing protein	NA	NA	NA	NA	NA
WP_019247543.1|254380_255766_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|255696_256233_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|256384_257776_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|257792_258773_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|258908_259892_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|259956_260856_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|260962_262717_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|262724_263849_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|263862_264843_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|265573_266524_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929712.1|267083_267629_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929713.1|267712_269332_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|269347_270502_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|270515_270641_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|270637_272389_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|272385_274065_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929716.1|274127_274676_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
WP_010929717.1|275818_276097_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|277140_278091_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_173651708.1|278108_278255_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929718.1|278368_278530_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_010929719.1|278537_278678_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815821.1|279196_279646_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_003815819.1|279655_280267_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_019247426.1|280425_281280_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|281299_282682_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|282746_283388_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|283527_283986_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|284010_284787_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|284840_285977_+	trypsin-like peptidase domain-containing protein	NA	W5SAB9	Pithovirus	31.2	1.2e-07
WP_005015810.1|285973_286924_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	390857	448366	4104288	transposase	Orpheovirus(14.29%)	50	NA	NA
WP_005012067.1|390857_391808_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927231.1|391944_392862_+	reductase	NA	NA	NA	NA	NA
WP_003815842.1|392858_393107_+	glutaredoxin family protein	NA	NA	NA	NA	NA
WP_003815840.1|393103_394309_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486045.1|394381_395377_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486046.1|395399_396620_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486047.1|396616_397261_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248476.1|398991_399801_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486048.1|400105_401059_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	5.6e-59
WP_014486049.1|401157_402141_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486050.1|402067_402769_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486051.1|402817_403588_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_019247259.1|403584_404763_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486052.1|404930_406637_-	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA	NA
WP_014486053.1|406633_407530_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486054.1|407570_409160_-	rhodanese homology domain-containing protein	NA	NA	NA	NA	NA
WP_003807867.1|409209_410202_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807865.1|410270_410870_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486055.1|411330_412311_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929577.1|412386_413337_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122777.1|413425_414340_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929782.1|414336_414996_+	LysE family translocator	NA	NA	NA	NA	NA
WP_003814709.1|415085_416009_+	alpha/beta fold hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
WP_010929783.1|416014_416470_-	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA	NA
WP_010929784.1|416466_417570_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
WP_157734656.1|417528_417798_+	GtrA family protein	NA	NA	NA	NA	NA
WP_010927086.1|417757_419377_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_003814720.1|419373_420432_-	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
WP_033446199.1|420561_421056_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_022997984.1|421148_422126_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929785.1|422321_423527_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_010929786.1|423523_425035_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_003814726.1|425050_426364_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_003814728.1|426554_426734_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814730.1|427143_427878_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
WP_010929577.1|430322_431273_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247421.1|431404_431803_-	GTP-binding protein	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
WP_003814701.1|432213_432684_-	universal stress protein	NA	NA	NA	NA	NA
WP_003820700.1|432772_433117_-	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
WP_010929788.1|433216_434617_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010929789.1|436405_436924_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
WP_003814694.1|437034_437790_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
WP_003814691.1|437985_439218_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929791.1|439210_439996_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_003814685.1|440062_441034_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814681.1|441044_442022_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247419.1|442147_443320_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929793.1|443346_444375_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003814674.1|444440_445634_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|447415_448366_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	589383	650575	4104288	transposase,protease	uncultured_Mediterranean_phage(40.0%)	56	NA	NA
WP_005013747.1|589383_590334_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023998122.1|590830_591700_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_010931496.1|591696_592518_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_019247235.1|592718_593210_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_019247236.1|593228_594302_+	CHAD domain-containing protein	NA	NA	NA	NA	NA
WP_023853086.1|594348_595452_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_003808577.1|595527_596148_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_003808574.1|596168_596678_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.1	1.2e-28
WP_003808570.1|596732_596984_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.4	1.6e-18
WP_010931494.1|597047_598181_+	benzoate/H(+) symporter BenE family transporter	NA	NA	NA	NA	NA
WP_003808567.1|598188_598575_-	MOSC N-terminal beta barrel domain-containing protein	NA	NA	NA	NA	NA
WP_010931493.1|598571_601091_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003808563.1|601519_601858_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003808562.1|601854_602361_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010931492.1|602422_603223_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931491.1|603333_604275_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931490.1|604368_605904_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931489.1|607583_609434_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.2	1.6e-17
WP_003808549.1|609437_610271_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931488.1|610270_611212_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931487.1|611463_612435_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931486.1|612576_614865_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003808542.1|615171_616080_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010931485.1|616134_617100_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_062810229.1|617174_618836_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010931483.1|618907_619618_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_154698388.1|619584_619749_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|619766_620717_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814152.1|621415_621799_+	membrane protein	NA	NA	NA	NA	NA
WP_010927005.1|621856_622459_+	DUF2946 family protein	NA	NA	NA	NA	NA
WP_003820995.1|622476_622878_-	DoxX family protein	NA	NA	NA	NA	NA
WP_003814158.1|623011_623905_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931481.1|623901_624483_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_003814165.1|625277_626012_+	arginyltransferase	NA	NA	NA	NA	NA
WP_010931480.1|626052_627102_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_003814172.1|627249_627828_-	TIGR01841 family phasin	NA	NA	NA	NA	NA
WP_010931479.1|628214_629192_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
WP_010931478.1|629285_633680_-	dermonecrotic toxin	NA	NA	NA	NA	NA
WP_003814178.1|633880_634729_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931477.1|634887_635700_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
WP_005015810.1|635755_636706_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931453.1|636804_637605_-	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_003814185.1|637666_638050_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_010931454.1|638061_639495_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
WP_003814188.1|639701_640031_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_010931455.1|640033_640783_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010931456.1|640965_641886_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_003814195.1|641932_642145_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931457.1|642167_642590_+	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_010931458.1|642606_643707_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931459.1|643803_645321_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_003814203.1|645396_646236_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_003814205.1|646257_647139_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814206.1|647220_648315_-	porin	NA	NA	NA	NA	NA
WP_076879617.1|648608_649559_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166340.1|649633_650575_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	655899	702090	4104288	tRNA,terminase,transposase,tail	uncultured_Caudovirales_phage(18.18%)	51	NA	NA
WP_023995141.1|655899_656925_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814221.1|656965_657205_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931464.1|657274_658864_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_010931465.1|658863_659412_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_003814226.1|659492_660065_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010927008.1|660083_660995_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814230.1|661068_662037_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931466.1|662159_663233_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_010931467.1|663237_665058_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010930800.1|665134_666085_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446132.1|666173_666509_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_003819076.1|666642_667293_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_010931468.1|667314_668733_-	amidase	NA	NA	NA	NA	NA
WP_019248554.1|668802_669558_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247734.1|669526_670285_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931471.1|670295_671177_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931472.1|671193_671901_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931473.1|671903_672662_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931474.1|672871_674614_+	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010925795.1|674606_675131_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931475.1|675170_675965_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248926.1|676132_677206_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|677304_678255_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247378.1|678506_678713_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931451.1|678784_679396_-	S24 family peptidase	NA	NA	NA	NA	NA
WP_023853179.1|679950_680202_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_161633094.1|680194_680884_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853183.1|680901_681123_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|681140_682091_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247942.1|682730_683216_+|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_010931447.1|683202_684480_+|terminase	terminase large subunit	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_010931446.1|684482_685901_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931445.1|685929_686985_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931444.1|686990_687233_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931443.1|687355_687958_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_005012808.1|688386_689337_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931442.1|690011_690263_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|690325_690808_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_010931440.1|690809_691010_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931439.1|691009_691405_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931438.1|691401_691800_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931437.1|691796_692219_+	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931436.1|692226_692727_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931435.1|692981_693500_+|tail	phage tail protein	tail	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_003813412.1|693509_693839_+|tail	phage tail assembly chaperone	tail	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931434.1|693856_694147_+	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_010931433.1|694172_696785_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931432.1|696794_697154_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931431.1|697221_697755_+	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931430.1|697751_698141_+	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931429.1|698133_702090_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
>prophage 8
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	708256	762186	4104288	tRNA,transposase	Planktothrix_phage(50.0%)	46	NA	NA
WP_003814636.1|708256_709987_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_010931419.1|710039_710468_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814641.1|710470_711151_+	protein TolQ	NA	NA	NA	NA	NA
WP_003814643.1|711150_711609_+	protein TolR	NA	NA	NA	NA	NA
WP_010931418.1|711645_712620_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_010931417.1|712636_713953_+	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_003814650.1|713984_714482_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_003814652.1|714568_715258_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_010931416.1|715257_716307_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814657.1|716303_717098_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_019247923.1|717266_717617_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247922.1|717592_718150_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012808.1|719279_720230_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929184.1|722367_723597_+	spore maturation protein	NA	NA	NA	NA	NA
WP_003814419.1|723599_725042_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_010931414.1|725146_726292_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_010931413.1|726323_727121_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931412.1|727145_728705_-	chaperone SurA	NA	NA	NA	NA	NA
WP_010931411.1|728701_731074_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931410.1|731183_732287_+	phosphotransferase	NA	NA	NA	NA	NA
WP_010931409.1|732286_732979_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_003814436.1|733122_733824_+	membrane protein	NA	NA	NA	NA	NA
WP_003814437.1|733808_734186_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_005012067.1|734917_735868_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814441.1|736027_736900_-	oxaloacetate decarboxylase	NA	NA	NA	NA	NA
WP_003814443.1|737240_737459_+	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
WP_019247242.1|737498_738878_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010929976.1|738919_740317_-	amidase family protein	NA	NA	NA	NA	NA
WP_010927038.1|740356_742009_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
WP_010929977.1|742012_742897_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929978.1|742896_743838_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929979.1|743916_745536_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929980.1|745702_746518_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814459.1|746585_747155_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|747155_748106_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814461.1|748760_749858_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_003814462.1|749891_751157_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929591.1|751314_752265_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929982.1|752508_753099_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929983.1|753114_755559_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_003814467.1|755678_756650_-	FecR family protein	NA	NA	NA	NA	NA
WP_023852739.1|756781_757306_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_005012067.1|757265_758216_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929984.1|758437_760633_-	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_010929985.1|760705_761134_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012808.1|761235_762186_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	853064	902328	4104288	transposase,holin	Vibrio_phage(33.33%)	40	NA	NA
WP_010929591.1|853064_854015_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247352.1|854032_854587_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813949.1|854588_855023_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003813951.1|855019_855454_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003813952.1|855437_856241_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_003813954.1|856257_857073_-	metallophosphoesterase	NA	NA	NA	NA	NA
WP_019248500.1|857069_857885_-	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_010930033.1|858031_858733_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813960.1|858760_860719_-|holin	choline BCCT transporter BetT	holin	A0A2I7QNT1	Vibrio_phage	30.3	8.0e-28
WP_005013747.1|860801_861752_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930032.1|861972_862641_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_010930031.1|862764_863871_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010930030.1|863883_866997_+	MexW/MexI family multidrug efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.5	4.5e-57
WP_010930029.1|866993_868487_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010926969.1|868501_869173_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_003813974.1|869216_869711_-	azurin	NA	NA	NA	NA	NA
WP_010930027.1|869851_870499_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_023853163.1|870602_872651_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010930025.1|872647_874660_+	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010930024.1|874685_876020_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_003813981.1|876128_877121_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813982.1|877187_879272_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_010930023.1|879296_880268_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930022.1|880396_881428_-	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_010930021.1|881431_882583_-	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_076879542.1|882753_883677_+	transcriptional regulator LrhA	NA	NA	NA	NA	NA
WP_003813987.1|883754_884579_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_023994644.1|884775_885792_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003813988.1|885988_886972_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930019.1|888570_889959_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003813991.1|889989_890979_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813992.1|891089_892322_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003813993.1|892603_893404_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930018.1|893426_895658_-|holin	choline BCCT transporter BetT	holin	NA	NA	NA	NA
WP_010930017.1|896445_896892_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_003813996.1|896913_897660_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_003813997.1|897803_898781_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930016.1|899414_900026_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
WP_003813999.1|900019_901237_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_005013747.1|901377_902328_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	911940	976880	4104288	transposase	Bacillus_phage(18.18%)	58	NA	NA
WP_005012067.1|911940_912891_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930051.1|912887_914720_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_010930052.1|915118_915778_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_023852837.1|915871_916018_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809770.1|916126_916294_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930054.1|916305_916986_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_010930055.1|917267_917984_+	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930056.1|917998_919300_-	phospholipase A	NA	NA	NA	NA	NA
WP_029444137.1|921444_924333_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930057.1|924556_925909_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_004568140.1|925937_926459_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_003819989.1|926455_927910_+	carboxylase	NA	NA	NA	NA	NA
WP_023852826.1|927944_928193_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247557.1|928298_929174_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010930060.1|929199_930255_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930061.1|930267_931059_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930062.1|931091_932462_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_005012067.1|933638_934589_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930064.1|934641_934863_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810832.1|935022_935235_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|935354_936473_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810839.1|936978_937230_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930066.1|937342_938293_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810840.1|938289_938673_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_023852913.1|938727_940542_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_010930068.1|940691_941519_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_010930069.1|941564_942545_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003810850.1|942541_942754_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810851.1|942750_943932_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_019248496.1|944095_944830_+	metallophosphoesterase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_010930071.1|944831_947444_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_003810859.1|947579_949493_-	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930072.1|950108_950519_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810865.1|950616_951702_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_005012067.1|951800_952751_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930088.1|952747_953722_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003821497.1|953846_954758_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
WP_004566317.1|955034_955427_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
WP_005012808.1|955556_956507_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930090.1|956536_956719_-	type II toxin-antitoxin system HicA family toxin	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
WP_010930091.1|957491_958673_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930092.1|958888_959566_-	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_010930093.1|959562_960288_-	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	NA	NA	NA	NA
WP_010930094.1|960413_960995_-	OmpA family protein	NA	NA	NA	NA	NA
WP_010930095.1|961365_964047_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
WP_010930096.1|964046_965180_+	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	44.0	6.4e-78
WP_010930097.1|965172_966258_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_010930098.1|966344_967244_+	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010930099.1|967240_968569_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_010930100.1|968583_969255_+	(d)CMP kinase	NA	NA	NA	NA	NA
WP_010930101.1|969442_971158_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_010930102.1|971159_971519_+	integration host factor subunit beta	NA	NA	NA	NA	NA
WP_010930103.1|971710_972025_+	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
WP_010930104.1|972067_973288_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
WP_010930105.1|973284_974226_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
WP_003821513.1|974222_975212_+	ADP-glyceromanno-heptose 6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
WP_033446303.1|975246_975831_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|975929_976880_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	996280	1059416	4104288	transposase	Enterococcus_phage(16.67%)	54	NA	NA
WP_005012067.1|996280_997231_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|997335_998385_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_010929632.1|998522_999539_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010926548.1|1001047_1001620_-	chorismate lyase	NA	NA	NA	NA	NA
WP_010930119.1|1001679_1002411_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_029443805.1|1002462_1003380_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930121.1|1004187_1007367_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_014486063.1|1007363_1008746_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930123.1|1008815_1009067_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_010930124.1|1009212_1009827_-	SCO family protein	NA	NA	NA	NA	NA
WP_019248379.1|1010013_1012128_-	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_003811948.1|1012203_1013055_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_010930126.1|1013051_1013678_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003817147.1|1013674_1015429_-	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930127.1|1015721_1018427_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_014905654.1|1018439_1020086_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930129.1|1020098_1021889_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_003817151.1|1022110_1023286_-	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010929584.1|1023328_1024279_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930130.1|1024377_1025118_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_010930131.1|1025312_1027349_+	transketolase	NA	NA	NA	NA	NA
WP_010930132.1|1027366_1028377_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010930133.1|1028494_1029688_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_010930134.1|1029717_1030491_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010930135.1|1030487_1031678_-	acetate kinase	NA	NA	NA	NA	NA
WP_003809454.1|1031703_1032642_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_010930136.1|1032638_1034987_-	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
WP_010930137.1|1035141_1035783_-	glutathione transferase	NA	NA	NA	NA	NA
WP_023853531.1|1035886_1037020_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994624.1|1037112_1037265_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930138.1|1037296_1037845_-	DinB family protein	NA	NA	NA	NA	NA
WP_003819814.1|1037863_1038349_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930139.1|1038526_1039465_+	DnaJ domain-containing protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
WP_003809467.1|1039467_1039785_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247197.1|1039830_1040775_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010930141.1|1042455_1043106_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_003809479.1|1043159_1043495_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930142.1|1043491_1044352_+	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
WP_003819817.1|1044368_1044650_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003809486.1|1044723_1044987_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_005012067.1|1045230_1046181_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811933.1|1046479_1047217_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_010930143.1|1047652_1047976_+	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811929.1|1048010_1048571_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_003811927.1|1048691_1049567_+	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003817154.1|1049579_1050527_+	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_019247393.1|1050628_1050922_+	response regulator	NA	NA	NA	NA	NA
WP_010930144.1|1050948_1053006_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_003811919.1|1053020_1053521_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930145.1|1053594_1055301_+	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_010930146.1|1056164_1057217_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_003811911.1|1057269_1057659_+	chemotaxis response regulator CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_003817162.1|1057667_1058300_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_010931363.1|1058399_1059416_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	1065400	1125463	4104288	tRNA,transposase,holin,protease	uncultured_Mediterranean_phage(37.5%)	50	NA	NA
WP_015041211.1|1065400_1066828_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010931363.1|1067765_1068782_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003809411.1|1069114_1070050_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
WP_010930154.1|1070099_1071980_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_003809416.1|1072046_1072391_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
WP_010930155.1|1072535_1073672_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_023853534.1|1073668_1074742_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_003809423.1|1074899_1076336_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_010930157.1|1076426_1077068_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023853536.1|1077403_1078420_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_005012808.1|1080462_1081413_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930160.1|1082615_1084037_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_003809431.1|1084300_1085017_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809432.1|1085101_1085419_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003819794.1|1085459_1085873_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_010930161.1|1085874_1086234_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853525.1|1086276_1087821_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930163.1|1087904_1088735_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_010930164.1|1088769_1089924_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930165.1|1089966_1090839_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486065.1|1090955_1093244_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003809441.1|1094450_1094915_+	barstar family protein	NA	NA	NA	NA	NA
WP_005013747.1|1094941_1095892_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154698393.1|1095909_1096047_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930167.1|1096259_1097036_-	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_003809638.1|1097080_1097938_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930169.1|1097959_1098976_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_014486066.1|1099110_1100151_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930171.1|1100345_1102427_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_010930172.1|1102662_1104156_+	exopolyphosphatase	NA	NA	NA	NA	NA
WP_003809629.1|1104386_1105181_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003819875.1|1105401_1106760_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_010930173.1|1106756_1107599_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_010930174.1|1107617_1109504_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_162096758.1|1109445_1109697_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930175.1|1109741_1110374_-	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_003809618.1|1110392_1110995_+	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|1111146_1112097_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_161633091.1|1112677_1113385_+	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_003812707.1|1113743_1114730_-	homoserine kinase	NA	NA	NA	NA	NA
WP_010930178.1|1114869_1115883_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_005012067.1|1115879_1116830_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_155120815.1|1116847_1116988_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003812703.1|1116942_1117401_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|1117437_1118751_-	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_010930180.1|1118768_1119140_+	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_019248549.1|1119136_1120600_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930182.1|1120740_1121469_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010930183.1|1121450_1124300_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010929591.1|1124512_1125463_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	1156529	1218701	4104288	tRNA,transposase	Erysipelothrix_phage(33.33%)	50	NA	NA
WP_010930198.1|1156529_1157480_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248935.1|1157578_1158202_-	serotype 2 fimbrial subunit	NA	NA	NA	NA	NA
WP_010930200.1|1158376_1160659_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930201.1|1160813_1163510_-	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930202.1|1163635_1164124_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813631.1|1166534_1169405_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930204.1|1169450_1170665_+	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813626.1|1170894_1172322_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_023853245.1|1172419_1173511_+	cell division protein ZapE	NA	NA	NA	NA	NA
WP_010930206.1|1173523_1174282_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003813621.1|1174369_1175272_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|1175268_1176219_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930207.1|1176348_1177332_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813618.1|1177386_1178109_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930211.1|1179587_1180943_+|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930212.1|1181023_1183399_-	RNA-binding transcriptional accessory protein Tex	NA	NA	NA	NA	NA
WP_010930213.1|1183563_1185639_+	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	30.0	2.4e-75
WP_003813594.1|1185700_1186501_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_010930214.1|1186602_1187565_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_019247742.1|1187552_1188308_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
WP_010930216.1|1188415_1190053_+	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA	NA
WP_003813586.1|1190120_1190858_+	acetoacetyl-CoA reductase	NA	NA	NA	NA	NA
WP_003813585.1|1190960_1191536_+	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA	NA
WP_010930217.1|1191708_1192245_+	iron transporter	NA	NA	NA	NA	NA
WP_003813580.1|1192247_1192592_+	cupredoxin domain-containing protein	NA	NA	NA	NA	NA
WP_010930218.1|1192607_1193453_+	FTR1 family protein	NA	NA	NA	NA	NA
WP_003821443.1|1193491_1194871_+	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_003813574.1|1194948_1195830_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_010929956.1|1195928_1196879_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811632.1|1196875_1197286_-	VOC family protein	NA	NA	NA	NA	NA
WP_010930219.1|1197393_1198248_-	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_003811636.1|1198240_1199203_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930220.1|1199248_1200373_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	28.3	1.5e-31
WP_019247966.1|1200478_1201357_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930222.1|1201481_1202261_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930223.1|1202414_1203836_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930224.1|1204270_1205968_+	sodium:solute symporter family protein	NA	NA	NA	NA	NA
WP_010930225.1|1206194_1207136_-	LD-carboxypeptidase	NA	NA	NA	NA	NA
WP_010930226.1|1207462_1208209_+	aldolase	NA	NA	NA	NA	NA
WP_033446252.1|1208216_1209143_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930228.1|1209264_1210182_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003811660.1|1210221_1211175_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811662.1|1211199_1211778_+	amino acid synthesis family protein	NA	NA	NA	NA	NA
WP_010930229.1|1213451_1214060_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930230.1|1214137_1214491_-	NirD/YgiW/YdeI family stress tolerance protein	NA	NA	NA	NA	NA
WP_010930231.1|1214574_1215564_-	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_023852977.1|1215560_1215749_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076879566.1|1215766_1216717_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|1216803_1217754_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931070.1|1217750_1218701_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	1269629	1326840	4104288	transposase	Klosneuvirus(16.67%)	49	NA	NA
WP_010931070.1|1269629_1270580_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931041.1|1274326_1274938_-	DUF2239 family protein	NA	NA	NA	NA	NA
WP_003812368.1|1275160_1276621_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.3	1.6e-97
WP_010931040.1|1276717_1278310_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	33.3	1.0e-17
WP_019247974.1|1278663_1278921_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003816876.1|1278922_1280263_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010931038.1|1280358_1281048_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247976.1|1281060_1282491_+	MFS transporter	NA	NA	NA	NA	NA
WP_014905903.1|1284215_1285037_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931036.1|1285047_1286619_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931035.1|1286647_1287625_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931034.1|1287651_1288455_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.2	2.7e-30
WP_010931033.1|1288451_1289246_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003816890.1|1289253_1290489_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_010931032.1|1290481_1290916_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|1291665_1292616_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931031.1|1293237_1294965_-	sulfate permease	NA	NA	NA	NA	NA
WP_010931030.1|1295076_1296435_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_023853289.1|1296491_1296710_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1296727_1297678_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931029.1|1297718_1298789_+	FUSC family protein	NA	NA	NA	NA	NA
WP_010931028.1|1298811_1299690_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931027.1|1299861_1300833_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931026.1|1300995_1301838_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931025.1|1301999_1302680_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931024.1|1302673_1303843_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931023.1|1303839_1304871_+	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
WP_010931022.1|1304914_1306156_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931021.1|1306190_1307723_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931020.1|1307803_1308427_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_010931019.1|1308457_1309069_+	LysE family translocator	NA	NA	NA	NA	NA
WP_010931018.1|1309104_1309575_+	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_019248147.1|1310006_1311011_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931017.1|1311047_1312562_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931016.1|1312565_1313525_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931015.1|1313553_1314357_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931014.1|1314358_1315993_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
WP_010931013.1|1316076_1317138_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_004567322.1|1317336_1317606_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931012.1|1317609_1318134_+	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
WP_010929591.1|1318549_1319500_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931011.1|1319496_1320531_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_003816758.1|1320639_1321278_+	DedA family protein	NA	NA	NA	NA	NA
WP_019247724.1|1321572_1321800_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003820420.1|1321922_1322636_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_005013747.1|1322880_1323831_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931009.1|1323934_1324216_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931008.1|1324330_1325779_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_005012808.1|1325889_1326840_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	1417073	1469226	4104288	tRNA,transposase	Salmonella_phage(25.0%)	46	NA	NA
WP_005013747.1|1417073_1418024_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023999730.1|1418041_1418194_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814065.1|1418190_1418544_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814063.1|1418556_1418919_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814061.1|1418960_1419386_-	DUF1841 family protein	NA	NA	NA	NA	NA
WP_003814059.1|1419588_1420845_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
WP_003814057.1|1421043_1422024_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015028.1|1422173_1423415_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1423513_1424464_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814052.1|1424472_1425168_-	two-component system response regulator KdpE	NA	NA	NA	NA	NA
WP_003814050.1|1427989_1428589_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_010930950.1|1428599_1430765_-	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
WP_010930949.1|1430788_1432573_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_017685545.1|1432572_1432662_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_003814042.1|1433356_1433629_+	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
WP_003814040.1|1433628_1435695_+	cation acetate symporter	NA	NA	NA	NA	NA
WP_010929577.1|1435691_1436642_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1436740_1437691_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015014.1|1437806_1438139_-	multidrug transporter	NA	NA	NA	NA	NA
WP_010929073.1|1438135_1438822_-	Smr/MutS family protein	NA	NA	NA	NA	NA
WP_010930948.1|1438808_1439768_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
WP_003814032.1|1439809_1442170_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
WP_010930946.1|1442169_1442802_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_010930945.1|1442903_1444244_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
WP_010930944.1|1444290_1445646_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
WP_170954289.1|1445771_1446416_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814024.1|1446360_1446678_-	virulence factor	NA	NA	NA	NA	NA
WP_003814023.1|1446950_1447466_-	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
WP_003814022.1|1447559_1447721_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814021.1|1447736_1448492_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_019247690.1|1448830_1449037_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814020.1|1449044_1449704_-	NAAT family transporter	NA	NA	NA	NA	NA
WP_010930941.1|1449998_1452203_-	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA	NA
WP_010930940.1|1452313_1453537_-	alcaligin siderophore export MFS transporter Bcr	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
WP_003814017.1|1453659_1454634_-	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA	NA
WP_005013753.1|1454701_1455895_-	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA	NA
WP_003814016.1|1455909_1456710_-	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA	NA
WP_010930939.1|1456706_1458563_-	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA	NA
WP_003814014.1|1458559_1459165_-	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA	NA
WP_003814013.1|1459183_1460569_-	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_003814012.1|1461294_1462521_+	cation:proton antiporter	NA	NA	NA	NA	NA
WP_003814011.1|1462609_1463392_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|1463490_1464441_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814010.1|1464467_1465241_+	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_003814009.1|1465252_1466494_+	MFS transporter	NA	NA	NA	NA	NA
WP_076879548.1|1468275_1469226_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	1513151	1573063	4104288	tRNA,transposase	Streptococcus_virus(12.5%)	53	NA	NA
WP_010930416.1|1513151_1513640_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_019248504.1|1513757_1514336_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010930418.1|1514441_1514810_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|1514908_1515859_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994932.1|1515865_1516978_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_010930419.1|1517664_1518867_+	MFS transporter	NA	NA	NA	NA	NA
WP_004568212.1|1518902_1519049_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930420.1|1519070_1521731_+	PD-(D/E)XK nuclease family protein	NA	NA	NA	NA	NA
WP_010930421.1|1521743_1525148_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_023995689.1|1525815_1528041_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
WP_010930423.1|1528087_1528414_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_010930424.1|1528464_1529073_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_005013747.1|1529171_1530122_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852714.1|1530220_1531171_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930425.1|1531240_1532005_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930426.1|1532001_1532601_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930427.1|1532704_1533556_-	neutral zinc metallopeptidase	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
WP_010928449.1|1533615_1534242_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_005012067.1|1534238_1535189_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019249265.1|1535287_1536400_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_019248041.1|1536389_1537391_-	imelysin family protein	NA	NA	NA	NA	NA
WP_019247498.1|1537496_1539008_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_023853587.1|1539004_1540309_-	imelysin	NA	NA	NA	NA	NA
WP_010930431.1|1540420_1540981_-	membrane protein	NA	NA	NA	NA	NA
WP_010930432.1|1541248_1541803_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
WP_010930433.1|1542258_1542474_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_033446228.1|1542728_1545326_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
WP_010930435.1|1545322_1546510_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_062826574.1|1546778_1547003_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930436.1|1547168_1547783_+	serotype 3 fimbrial subunit	NA	NA	NA	NA	NA
WP_010930437.1|1547871_1548999_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_033446216.1|1549010_1549916_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_005012067.1|1550808_1551759_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930439.1|1551940_1552693_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_003811112.1|1552761_1553421_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_003811113.1|1553417_1554146_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
WP_010930440.1|1554158_1556438_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
WP_010930441.1|1556462_1556666_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_010930442.1|1556707_1557340_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	2.4e-13
WP_010930443.1|1557475_1558393_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_010930444.1|1558389_1559103_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_003811135.1|1559340_1560111_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003811137.1|1560115_1560715_-	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
WP_003811138.1|1560959_1562450_+	AMP nucleosidase	NA	NA	NA	NA	NA
WP_010926696.1|1562508_1562793_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930445.1|1562930_1563086_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811148.1|1563358_1564285_-	YicC family protein	NA	NA	NA	NA	NA
WP_003811149.1|1564421_1565162_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_010930446.1|1565328_1566705_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003811152.1|1566886_1567792_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930448.1|1569443_1571246_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010930449.1|1571372_1572014_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_005012808.1|1572112_1573063_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	1618235	1673826	4104288	transposase	Brazilian_cedratvirus(25.0%)	47	NA	NA
WP_005013747.1|1618235_1619186_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930486.1|1619244_1620018_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486074.1|1620010_1621567_+	LTA synthase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1621563_1622514_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810741.1|1623840_1624443_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810743.1|1624682_1625384_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003816696.1|1625377_1626160_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_005012808.1|1626344_1627295_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930483.1|1627393_1628131_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010926609.1|1628320_1629079_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930482.1|1629125_1630115_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930481.1|1630292_1631261_-	transporter	NA	NA	NA	NA	NA
WP_010930480.1|1632800_1633769_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930479.1|1633777_1634719_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|1635192_1636203_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930477.1|1636193_1637708_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930476.1|1637704_1639051_+	BatD family protein	NA	NA	NA	NA	NA
WP_010930475.1|1639053_1640088_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_023852967.1|1640137_1641763_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_005012067.1|1642315_1643266_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930487.1|1643370_1644318_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247865.1|1644371_1646186_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010930489.1|1646178_1646853_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023995112.1|1646982_1650057_+	autotransporter SphB2	NA	NA	NA	NA	NA
WP_019247905.1|1650070_1650370_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930492.1|1650684_1651308_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_010930493.1|1651551_1652421_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010930494.1|1652398_1653343_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247909.1|1653428_1654355_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247910.1|1654467_1655247_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930497.1|1655237_1656434_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010930498.1|1656464_1657415_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_010930499.1|1657636_1658326_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930500.1|1658390_1659146_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930501.1|1659197_1660190_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930502.1|1660199_1661153_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811538.1|1661268_1662231_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249376.1|1663632_1664061_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1664057_1665008_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_170954298.1|1665301_1666039_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_010930504.1|1666462_1667650_-	MFS transporter	NA	NA	NA	NA	NA
WP_019249653.1|1667653_1668034_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930506.1|1669753_1670725_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930507.1|1670738_1671452_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930508.1|1671456_1672374_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811452.1|1672480_1672777_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929588.1|1672875_1673826_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	1832642	1891912	4104288	tRNA,transposase,protease	Klosneuvirus(40.0%)	51	NA	NA
WP_005013747.1|1832642_1833593_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930573.1|1833717_1834527_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929577.1|1834727_1835678_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930574.1|1836951_1838169_+	four-carbon acid sugar kinase family protein	NA	NA	NA	NA	NA
WP_003818670.1|1839225_1840128_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930576.1|1840204_1841077_+	MOSC N-terminal beta barrel domain-containing protein	NA	NA	NA	NA	NA
WP_003818672.1|1841207_1841576_+	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_010930577.1|1841633_1842680_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_010930578.1|1842875_1844132_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_003810623.1|1844136_1845474_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_003818676.1|1845623_1846580_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247555.1|1846682_1847615_-	acyclic terpene utilization AtuA family protein	NA	NA	NA	NA	NA
WP_019247554.1|1847730_1848051_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247553.1|1848043_1848403_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930581.1|1848450_1850025_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810637.1|1850077_1851022_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930582.1|1851039_1851870_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930583.1|1851862_1853497_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	8.2e-18
WP_010930584.1|1853493_1854849_+	amidase	NA	NA	NA	NA	NA
WP_010930585.1|1855755_1857333_+	lipoprotein	NA	NA	NA	NA	NA
WP_010930586.1|1857336_1858611_+	type 4b pilus protein PilO2	NA	NA	NA	NA	NA
WP_010930587.1|1858708_1859083_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930588.1|1860798_1861932_+	general secretion pathway protein	NA	NA	NA	NA	NA
WP_003810661.1|1861969_1862575_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_010930589.1|1862571_1863390_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930590.1|1863461_1866086_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
WP_004568544.1|1866072_1866327_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930591.1|1866393_1866975_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926757.1|1867278_1867539_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_014905757.1|1867704_1868328_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_003816734.1|1868327_1869101_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_010930593.1|1869097_1870306_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010930594.1|1870331_1870805_-	RidA family protein	NA	NA	NA	NA	NA
WP_010930048.1|1870878_1871829_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879566.1|1871927_1872878_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930796.1|1872976_1874326_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_023852900.1|1875091_1875847_+	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930794.1|1875939_1878822_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_003810689.1|1879144_1879570_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_004568542.1|1879597_1880746_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810693.1|1880742_1881249_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930793.1|1881255_1882551_+	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_023995843.1|1882609_1883896_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930791.1|1883897_1884536_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_003810701.1|1884538_1885699_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_003810703.1|1885725_1887081_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_010930790.1|1887084_1888155_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810707.1|1888293_1888530_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930789.1|1888617_1889724_+	GTPase HflX	NA	NA	NA	NA	NA
WP_010930788.1|1889689_1890994_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930787.1|1891012_1891912_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
>prophage 19
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	1902152	1945426	4104288	transposase	Staphylococcus_phage(25.0%)	45	NA	NA
WP_005013747.1|1902152_1903103_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1903201_1904152_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930782.1|1904351_1905437_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_003810400.1|1905452_1906214_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_170954295.1|1906210_1907170_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.6	1.7e-23
WP_010930780.1|1907232_1907733_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930779.1|1907765_1908509_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_010930778.1|1908604_1908844_-	membrane protein	NA	NA	NA	NA	NA
WP_010930777.1|1908857_1909010_-	lipoprotein	NA	NA	NA	NA	NA
WP_010930776.1|1909095_1910586_-	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA	NA
WP_010930775.1|1910677_1911616_-	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA	NA
WP_003818560.1|1911612_1911789_-	cytochrome oxidase	NA	NA	NA	NA	NA
WP_003810383.1|1911791_1912454_-	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA	NA
WP_003810379.1|1914075_1914219_-	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
WP_010930774.1|1914215_1915190_-	membrane protein	NA	NA	NA	NA	NA
WP_162268682.1|1915084_1915339_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1915356_1916307_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930773.1|1916303_1917578_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_010930772.1|1917681_1918875_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930771.1|1918871_1919525_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930770.1|1919521_1920958_+	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930769.1|1920945_1921305_+	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_162268681.1|1922119_1922260_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1922277_1923228_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930768.1|1923224_1925090_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930767.1|1925347_1926868_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_003816959.1|1926955_1927606_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930766.1|1928554_1929850_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_010930765.1|1929871_1930756_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930764.1|1930854_1931730_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_003816964.1|1931719_1932076_-	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930763.1|1932206_1933181_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|1933310_1933490_-	DUF3008 family protein	NA	NA	NA	NA	NA
WP_029443822.1|1933587_1934112_+	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_010930761.1|1934122_1934959_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816971.1|1935071_1935443_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930760.1|1935439_1935991_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816975.1|1936006_1937698_-	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_003816977.1|1937746_1938427_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014905663.1|1938674_1939139_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|1939308_1940238_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_019247659.1|1940250_1940898_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023997035.1|1940971_1942789_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_005012067.1|1942872_1943823_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|1944475_1945426_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	1975199	2039568	4104288	transposase	Vibrio_phage(20.0%)	51	NA	NA
WP_005013747.1|1975199_1976150_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015810.1|1976371_1977322_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852887.1|1977420_1978386_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930740.1|1978523_1979423_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930739.1|1982017_1983505_+	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_014486081.1|1983515_1984712_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_003816680.1|1984784_1986104_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010930737.1|1986100_1986976_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930736.1|1987006_1988155_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930735.1|1988172_1988487_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_062810228.1|1988508_1989231_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003816690.1|1989230_1990049_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816691.1|1990053_1990581_-	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_010930733.1|1990586_1991843_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_010930732.1|1992201_1993341_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930731.1|1993418_1994291_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930730.1|1995161_1996112_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930729.1|1996071_1996707_-	membrane protein	NA	NA	NA	NA	NA
WP_010930728.1|1997066_1998389_-	isocitrate lyase	NA	NA	NA	NA	NA
WP_010930727.1|1998707_1999529_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	4.1e-42
WP_003810356.1|2000953_2001526_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930726.1|2001565_2003395_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_010930725.1|2003357_2004416_-	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930724.1|2004453_2004915_-	holo-ACP synthase	NA	NA	NA	NA	NA
WP_003810344.1|2004999_2005746_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_019247651.1|2007236_2010467_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_019248531.1|2010533_2011865_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010930721.1|2012117_2012492_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|2012594_2013773_-	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_003810329.1|2013783_2014374_-	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_003818535.1|2014484_2015291_+	TOBE domain-containing protein	NA	NA	NA	NA	NA
WP_010930719.1|2015316_2016111_-	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_010930718.1|2017111_2018086_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003818533.1|2018244_2018757_-	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_003818532.1|2018913_2019885_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930717.1|2021629_2022436_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930716.1|2022432_2023734_-	malonyl-CoA decarboxylase family protein	NA	NA	NA	NA	NA
WP_010930715.1|2023684_2024449_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930714.1|2024562_2025333_-	spermidine synthase	NA	NA	NA	NA	NA
WP_010930713.1|2025417_2026605_-	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_003818524.1|2026677_2027052_-	tautomerase family protein	NA	NA	NA	NA	NA
WP_003810308.1|2027152_2028415_-	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003810306.1|2028411_2029269_-	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003818523.1|2029441_2030443_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|2030894_2031845_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930712.1|2033360_2034560_+	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_003810297.1|2034928_2035165_+	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_010930711.1|2035228_2035396_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_010930710.1|2035509_2037315_-	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.2e-19
WP_062826579.1|2037568_2038519_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931070.1|2038617_2039568_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	2171097	2220750	4104288	tRNA,transposase	Synechococcus_phage(15.38%)	43	NA	NA
WP_005012067.1|2171097_2172048_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879626.1|2172146_2174141_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
WP_010930543.1|2174200_2175166_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_010930542.1|2175155_2178017_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_010930541.1|2178019_2178526_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930540.1|2178630_2179839_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_033446178.1|2179840_2180779_-	membrane protein	NA	NA	NA	NA	NA
WP_010930538.1|2180940_2181414_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|2181410_2182361_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566334.1|2182471_2182912_-	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_010930537.1|2183040_2184270_-	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_004566336.1|2184308_2185130_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_029443743.1|2185183_2186335_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930535.1|2186426_2186915_-	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
WP_019247811.1|2189465_2192015_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930533.1|2192085_2194659_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_003813568.1|2194924_2195125_+	CsbD family protein	NA	NA	NA	NA	NA
WP_003813570.1|2195156_2195318_+	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_003813572.1|2195375_2195714_+	BON domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2195862_2196813_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247882.1|2197587_2198256_+	arylesterase	NA	NA	NA	NA	NA
WP_019247881.1|2198237_2200253_-	SurA N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_004568486.1|2200435_2201185_+	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
WP_003816518.1|2201197_2202061_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_003816520.1|2202064_2203480_-	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
WP_010930530.1|2203613_2204342_-	redoxin family protein	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
WP_003811035.1|2204480_2204681_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_003816523.1|2204856_2205255_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003816525.1|2205278_2206679_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
WP_010930529.1|2206797_2207550_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930528.1|2207838_2208438_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248494.1|2208542_2209322_-	3'-5' exonuclease	NA	NA	NA	NA	NA
WP_003811022.1|2209318_2210203_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
WP_019247478.1|2210220_2211000_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.8e-32
WP_010930526.1|2210984_2211743_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
WP_003811015.1|2211868_2212516_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_010929632.1|2212783_2213800_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930524.1|2213897_2214938_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
WP_003811011.1|2215072_2216365_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
WP_003811007.1|2217724_2218108_+	thioredoxin family protein	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
WP_010930523.1|2218125_2218713_-	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
WP_005012067.1|2218750_2219701_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930048.1|2219799_2220750_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	2477057	2535301	4104288	tRNA,transposase	Planktothrix_phage(28.57%)	54	NA	NA
WP_005012067.1|2477057_2478008_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930388.1|2478487_2479144_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
WP_010930387.1|2479158_2480826_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930386.1|2480828_2481458_-	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_014486072.1|2481669_2482764_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930384.1|2482908_2483721_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_023853502.1|2483724_2485428_-	FimV N-terminal domain protein	NA	NA	NA	NA	NA
WP_010930382.1|2485478_2486609_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930381.1|2486795_2487872_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_010930380.1|2487953_2488604_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_010930379.1|2488618_2490022_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_004567445.1|2490305_2491124_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930378.1|2491120_2491825_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.0	2.6e-13
WP_010930377.1|2492724_2493840_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_004567447.1|2493873_2494248_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930376.1|2494270_2495428_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA	NA
WP_003812666.1|2495440_2495674_-	lipoprotein	NA	NA	NA	NA	NA
WP_019247523.1|2496308_2499278_-	formate dehydrogenase subunit alpha	NA	NA	NA	NA	NA
WP_023853518.1|2499292_2499502_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248667.1|2499653_2500283_-	molecular chaperone TorD family protein	NA	NA	NA	NA	NA
WP_010930373.1|2500279_2502370_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_010930372.1|2502393_2503074_-	DUF3306 domain-containing protein	NA	NA	NA	NA	NA
WP_003820494.1|2503070_2503631_-	DUF3305 domain-containing protein	NA	NA	NA	NA	NA
WP_004567450.1|2503637_2504735_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010930371.1|2504887_2505481_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA	NA
WP_010930370.1|2505477_2506770_+	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_003812685.1|2506783_2507326_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
WP_010930369.1|2507335_2508172_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003820487.1|2508205_2509267_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	42.8	2.9e-80
WP_019247210.1|2509308_2510361_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_019247209.1|2510376_2510679_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|2510820_2511771_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268680.1|2511788_2511953_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930368.1|2511949_2513644_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003809599.1|2513640_2514726_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
WP_010930367.1|2514773_2515673_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003809593.1|2515683_2516328_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_010930366.1|2517349_2520592_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_023852833.1|2520602_2521757_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.4	3.3e-53
WP_010930364.1|2521983_2522946_+	transaldolase	NA	H6WFR1	Cyanophage	29.2	7.5e-11
WP_076879624.1|2523044_2523995_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930363.1|2524093_2525044_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930362.1|2525053_2525743_-	VIT family protein	NA	NA	NA	NA	NA
WP_003811741.1|2525802_2526240_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003811743.1|2526285_2527179_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811746.1|2527226_2528399_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811748.1|2528395_2529550_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003811750.1|2529746_2530097_-	RnfH family protein	NA	NA	NA	NA	NA
WP_003811752.1|2530086_2530521_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_010930800.1|2530537_2531488_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811754.1|2531635_2532103_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_010930360.1|2532083_2533241_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811759.1|2533306_2534233_-	paraslipin	NA	NA	NA	NA	NA
WP_005012067.1|2534350_2535301_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	2577579	2644079	4104288	transposase	uncultured_Caudovirales_phage(40.0%)	56	NA	NA
WP_005012067.1|2577579_2578530_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811850.1|2578899_2579472_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
WP_003811852.1|2579474_2580485_+	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
WP_010930335.1|2580477_2580978_+	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
WP_003811855.1|2580988_2581330_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA	NA
WP_015041547.1|2581341_2582133_+	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA	NA
WP_003811859.1|2582149_2582419_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA	NA
WP_010930333.1|2582441_2583230_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA	NA
WP_010929632.1|2583276_2584293_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_014486070.1|2584509_2585952_-	PAS domain-containing protein	NA	A0A1B0V854	Salmonella_phage	41.8	1.0e-35
WP_010930332.1|2586130_2587750_-	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.3	1.5e-08
WP_010930331.1|2587870_2589691_-	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.6	6.4e-11
WP_010930330.1|2589769_2591302_-	flagellar hook-associated protein FlgL	NA	NA	NA	NA	NA
WP_010930329.1|2591335_2592982_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
WP_010930328.1|2593051_2594074_-	flagellar assembly peptidoglycan hydrolase FlgJ	NA	A0A088F6W1	Sulfitobacter_phage	31.4	1.9e-12
WP_010930327.1|2594091_2595225_-	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA	NA
WP_010930326.1|2595227_2595917_-	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA	NA
WP_010930325.1|2595916_2596702_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
WP_003817181.1|2596745_2597510_-	flagellar basal body rod protein FlgF	NA	NA	NA	NA	NA
WP_003817180.1|2597548_2598970_-	flagellar hook-basal body complex protein	NA	NA	NA	NA	NA
WP_010930324.1|2599035_2599740_-	flagellar basal body rod modification protein FlgD	NA	NA	NA	NA	NA
WP_003817176.1|2599787_2600207_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
WP_010930323.1|2600219_2600627_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
WP_010930322.1|2600810_2601521_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
WP_003817172.1|2601647_2601938_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
WP_003817170.1|2601955_2602438_+	flagellar protein FlgN	NA	NA	NA	NA	NA
WP_010930321.1|2606943_2608098_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA	NA
WP_010931363.1|2608403_2609420_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930319.1|2609666_2610455_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003812020.1|2610521_2611202_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812022.1|2611198_2611969_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	9.8e-30
WP_010930208.1|2612067_2613018_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811401.1|2613073_2613991_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_003811400.1|2614001_2615180_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	NA	NA	NA	NA
WP_010930318.1|2615199_2616195_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811396.1|2617783_2618392_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_003811393.1|2618379_2619420_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_003811391.1|2619437_2620400_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811389.1|2620396_2621590_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930317.1|2621586_2622384_-	citryl-CoA lyase	NA	NA	NA	NA	NA
WP_014486069.1|2622409_2623396_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930316.1|2623414_2625454_-	acetate--CoA ligase family protein	NA	NA	NA	NA	NA
WP_010930315.1|2625655_2626336_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930314.1|2626349_2627261_-	CoA ester lyase	NA	NA	NA	NA	NA
WP_003811381.1|2627257_2627836_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930313.1|2627974_2628880_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930312.1|2628887_2632307_+	TM0106 family RecB-like putative nuclease	NA	NA	NA	NA	NA
WP_010930311.1|2632294_2634895_-	BP1344/BB2830 family autotransporter	NA	NA	NA	NA	NA
WP_003811375.1|2635850_2636483_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003811372.1|2636876_2637635_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_003811370.1|2637631_2638834_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010930208.1|2639021_2639972_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930310.1|2640879_2642025_+	DUF3182 family protein	NA	NA	NA	NA	NA
WP_019247449.1|2642011_2642767_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003811361.1|2642883_2643063_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930208.1|2643128_2644079_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	2807684	2870128	4104288	transposase	Diachasmimorpha_longicaudata_entomopoxvirus(20.0%)	55	NA	NA
WP_023853639.1|2807684_2808635_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931071.1|2808963_2809569_+	fimbrial major subunit FimX	NA	NA	NA	NA	NA
WP_010931072.1|2809622_2810936_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
WP_003813284.1|2811010_2811481_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_010931073.1|2811480_2812269_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
WP_010931074.1|2812279_2813932_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
WP_010929591.1|2814019_2814970_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931075.1|2816131_2816638_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
WP_003813293.1|2816634_2817399_-	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA	NA
WP_010931076.1|2817414_2817699_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
WP_003813298.1|2817763_2818753_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
WP_010931077.1|2818924_2819854_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
WP_003813302.1|2819825_2820512_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
WP_003813303.1|2820545_2821091_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
WP_003813306.1|2821135_2822401_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003813309.1|2822397_2823300_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_019247679.1|2824481_2825426_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931079.1|2825520_2827038_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931080.1|2827079_2828708_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_003811986.1|2828815_2829697_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931081.1|2832809_2833184_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
WP_003812004.1|2833208_2833547_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931082.1|2833590_2835225_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
WP_010931083.1|2835263_2836610_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_003812010.1|2836717_2838139_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_010931084.1|2838208_2838793_-	nitroreductase	NA	NA	NA	NA	NA
WP_005012067.1|2838895_2839846_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931085.1|2839980_2841087_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010931086.1|2841097_2842195_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_010931087.1|2842339_2843545_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_010931088.1|2843551_2844073_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
WP_010931089.1|2844069_2844561_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
WP_003819740.1|2844557_2844809_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_003819741.1|2844789_2845275_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_010931090.1|2845410_2848872_+	DUF748 domain-containing protein	NA	NA	NA	NA	NA
WP_010931091.1|2848889_2849774_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_010931092.1|2849783_2850215_-	lipoprotein	NA	NA	NA	NA	NA
WP_003809348.1|2850461_2850965_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
WP_010931094.1|2851042_2852443_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931095.1|2852517_2853393_-	membrane protein	NA	NA	NA	NA	NA
WP_023853546.1|2853389_2854397_-	biotin synthase BioB	NA	NA	NA	NA	NA
WP_010931097.1|2854864_2855170_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003819753.1|2855260_2855851_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930525.1|2856041_2857058_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010931098.1|2857249_2859586_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
WP_003812014.1|2859668_2860103_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_010931070.1|2860201_2861152_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931099.1|2861148_2861943_-	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_010931100.1|2861974_2862679_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931101.1|2862753_2863554_-	SURF1 family protein	NA	NA	NA	NA	NA
WP_003809276.1|2863550_2863958_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_003819722.1|2863954_2864596_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_010931102.1|2864588_2866589_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010931103.1|2867849_2869181_+	MFS transporter	NA	NA	NA	NA	NA
WP_005012067.1|2869177_2870128_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	2884606	2925965	4104288	transposase,protease	uncultured_Mediterranean_phage(40.0%)	31	NA	NA
WP_010930800.1|2884606_2885557_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154698391.1|2885574_2885733_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931110.1|2885887_2889709_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010931111.1|2889865_2890534_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_014905522.1|2890538_2892212_-	MCE family protein	NA	NA	NA	NA	NA
WP_003820402.1|2892230_2893550_-	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_010931114.1|2893554_2895870_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_010931115.1|2895925_2898094_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_010931116.1|2898090_2903280_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_003820400.1|2903369_2903684_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_003812875.1|2903911_2904157_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820399.1|2904251_2904770_+	DUF192 domain-containing protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_010931117.1|2904869_2906075_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_019247560.1|2906190_2907588_-	chloride channel protein	NA	NA	NA	NA	NA
WP_010931119.1|2907704_2908283_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_010931120.1|2908355_2909747_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_005012067.1|2909914_2910865_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812889.1|2911145_2911766_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_010931122.1|2911762_2912176_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_010931123.1|2912172_2913216_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_003812895.1|2913271_2913460_+	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931124.1|2913469_2914234_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_010931125.1|2914324_2914981_+	adenylate kinase	NA	NA	NA	NA	NA
WP_010931126.1|2915072_2915831_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931127.1|2915856_2917458_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931128.1|2917658_2918663_+	FecR domain-containing protein	NA	NA	NA	NA	NA
WP_003812908.1|2918763_2919027_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931129.1|2919144_2919921_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_005012067.1|2920511_2921462_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|2923845_2924958_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012808.1|2925014_2925965_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	2956351	3010582	4104288	transposase	Planktothrix_phage(16.67%)	50	NA	NA
WP_005012067.1|2956351_2957302_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268686.1|2957319_2957469_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023852715.1|2957422_2958319_-	inositol monophosphatase	NA	NA	NA	NA	NA
WP_003814547.1|2960596_2962822_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_003814544.1|2962986_2964075_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_019247918.1|2964031_2964685_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931144.1|2964732_2965530_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930176.1|2966061_2967012_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247277.1|2967086_2968241_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|2968297_2969248_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814535.1|2969346_2969652_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003820797.1|2969680_2970115_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_010931147.1|2970116_2971361_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820799.1|2971357_2972068_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_033446288.1|2972082_2972994_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931149.1|2973356_2973761_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247890.1|2973757_2974216_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_019247891.1|2974222_2975131_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010931150.1|2975127_2975994_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_003814524.1|2975980_2976808_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003820806.1|2976818_2977946_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_023852748.1|2979023_2980262_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931152.1|2980303_2981566_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010931153.1|2981572_2982325_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_019248355.1|2982376_2982562_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820813.1|2982837_2983302_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_003820814.1|2983333_2983993_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_010931154.1|2984137_2986246_+	AsmA family protein	NA	NA	NA	NA	NA
WP_023852714.1|2986242_2987193_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931155.1|2987296_2987917_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931156.1|2988008_2988761_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019248356.1|2989895_2991020_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247402.1|2991065_2991434_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2991675_2992626_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247492.1|2993661_2994204_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023998107.1|2994401_2994572_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2994589_2995540_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997028.1|2995536_2996502_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815281.1|2996571_2997408_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_010931158.1|2997920_2999030_+	porin	NA	NA	NA	NA	NA
WP_005012067.1|2999091_3000042_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931159.1|3000234_3001017_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931160.1|3001030_3001780_-	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	26.4	1.2e-11
WP_010931161.1|3001807_3003154_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931162.1|3003179_3004109_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003819549.1|3004224_3005130_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931163.1|3005147_3006347_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_010931164.1|3006419_3007112_-	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	29.9	4.7e-07
WP_010931165.1|3007160_3009587_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.8	1.2e-86
WP_023853143.1|3009631_3010582_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	3379988	3433729	4104288	transposase	Staphylococcus_phage(33.33%)	48	NA	NA
WP_023995489.1|3379988_3380939_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931336.1|3381343_3381988_-	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_019247677.1|3382012_3382597_-	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_014905506.1|3382697_3383315_-	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_010931337.1|3383317_3385033_-	urease subunit alpha	NA	NA	NA	NA	NA
WP_010931338.1|3385029_3385338_-	urease subunit beta	NA	NA	NA	NA	NA
WP_003814828.1|3385354_3385972_-	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_010931340.1|3386016_3386319_-	urease subunit gamma	NA	NA	NA	NA	NA
WP_003814832.1|3386419_3387274_-	urease accessory protein UreD	NA	NA	NA	NA	NA
WP_124740609.1|3387461_3387686_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929281.1|3387855_3388128_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010929282.1|3388545_3388953_-	GFA family protein	NA	NA	NA	NA	NA
WP_010931341.1|3389322_3390117_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010927102.1|3390217_3391453_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003814852.1|3391521_3392538_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931342.1|3392549_3393926_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814856.1|3393922_3395119_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814858.1|3395115_3396654_-	SpoVR family protein	NA	NA	NA	NA	NA
WP_010931343.1|3396650_3397910_-	YeaH/YhbH family protein	NA	NA	NA	NA	NA
WP_005012067.1|3399850_3400801_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931344.1|3401567_3402662_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247312.1|3402654_3403989_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_003808193.1|3403942_3404626_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_024000003.1|3404651_3405815_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_004566224.1|3405811_3406813_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931346.1|3406812_3407685_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931347.1|3407681_3408431_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931348.1|3408427_3409219_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931349.1|3409215_3410355_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_047122778.1|3410630_3411416_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486103.1|3411449_3412232_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010931351.1|3412235_3412625_+	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_010931352.1|3413764_3414628_+	MaoC family dehydratase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931353.1|3414663_3415752_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|3415748_3416699_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247959.1|3417052_3420031_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003818344.1|3420957_3421836_+	fatty acid desaturase	NA	NA	NA	NA	NA
WP_005013747.1|3423784_3424735_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931354.1|3424731_3425199_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_010931355.1|3425241_3426012_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010927090.1|3426032_3426833_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931356.1|3426843_3428253_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_003814739.1|3428347_3429133_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931561.1|3429372_3430389_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814742.1|3430496_3430889_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931357.1|3431026_3431707_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_023994844.1|3431711_3432683_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930179.1|3432778_3433729_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 29
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	3439884	3499182	4104288	tRNA,transposase	Acinetobacter_phage(27.27%)	48	NA	NA
WP_003820957.1|3439884_3441648_+|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931362.1|3441759_3442638_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003814250.1|3442750_3443566_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_003814252.1|3443569_3443821_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_010929632.1|3443905_3444922_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814254.1|3445252_3445474_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_019247693.1|3447834_3448752_-	DMT family transporter	NA	NA	NA	NA	NA
WP_019247692.1|3449249_3450458_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931365.1|3450537_3452109_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814275.1|3452226_3453162_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_003814277.1|3453350_3454295_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814283.1|3454862_3460580_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_010931367.1|3460585_3461713_+	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814287.1|3461768_3462395_+	aminotransferase class IV	NA	NA	NA	NA	NA
WP_010931363.1|3462666_3463683_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010927020.1|3463778_3464489_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931368.1|3464485_3465475_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931369.1|3465570_3467202_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931370.1|3467204_3467942_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247745.1|3468097_3468970_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_003814298.1|3469238_3470459_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814300.1|3470455_3471115_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814302.1|3471186_3471819_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010931372.1|3471848_3472367_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_010931373.1|3472377_3473487_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814312.1|3473533_3474388_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931374.1|3474389_3475292_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3476514_3477465_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997720.1|3479219_3480209_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247413.1|3480205_3480364_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931375.1|3480384_3481173_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_003817833.1|3481169_3482201_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_003815390.1|3482219_3482783_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_010931376.1|3482838_3484359_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_010931377.1|3484622_3485327_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_003815384.1|3485334_3486072_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_003815381.1|3486177_3486552_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815379.1|3486594_3487884_+	murein transglycosylase A	NA	NA	NA	NA	NA
WP_010931378.1|3487880_3489050_+	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_010931379.1|3489046_3489886_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931380.1|3489945_3490881_+	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_005012067.1|3490893_3491844_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931381.1|3491942_3492905_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_003817821.1|3492936_3493296_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931382.1|3493420_3494323_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_010931383.1|3494324_3496097_-	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_003815367.1|3496131_3496908_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_023852617.1|3498231_3499182_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 30
NZ_CP010260	Bordetella pertussis strain I521 chromosome, complete genome	4104288	3514120	3572193	4104288	tRNA,transposase	Planktothrix_phage(12.5%)	47	NA	NA
WP_005012808.1|3514120_3515071_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931392.1|3515199_3516333_-	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931393.1|3516376_3517282_-	hydrolase	NA	NA	NA	NA	NA
WP_023852622.1|3517284_3518985_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
WP_010931394.1|3518981_3519902_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003817805.1|3519909_3520887_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931395.1|3520945_3521980_-	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_003815317.1|3523954_3524191_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023995266.1|3524317_3525181_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_003815315.1|3525269_3526091_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003815313.1|3526170_3526908_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931397.1|3526904_3527897_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_003817794.1|3528010_3528673_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931399.1|3528717_3529866_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010931400.1|3532189_3533140_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486105.1|3533480_3534431_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3534529_3535480_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443756.1|3535776_3536274_+	cupredoxin family protein	NA	NA	NA	NA	NA
WP_010931403.1|3536316_3538092_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_010931404.1|3538099_3538966_+	copper resistance protein B	NA	NA	NA	NA	NA
WP_019249391.1|3538972_3539707_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931406.1|3540876_3541671_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815296.1|3541960_3542551_+	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931407.1|3542584_3543913_-	amidase	NA	NA	NA	NA	NA
WP_010931408.1|3543987_3545133_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014905478.1|3545244_3546243_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446233.1|3546205_3546640_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_010929974.1|3548156_3549041_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929973.1|3549037_3550243_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929972.1|3550239_3551100_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_003807038.1|3551212_3553003_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_003807035.1|3553043_3553709_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	6.7e-11
WP_010929971.1|3553709_3554018_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929970.1|3554183_3555470_-	putative Na+/H+ antiporter	NA	NA	NA	NA	NA
WP_010929969.1|3556903_3557854_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929968.1|3559805_3561020_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_003815171.1|3561125_3562115_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_003815172.1|3562111_3562720_+	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_010929967.1|3562732_3563362_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815175.1|3563358_3563979_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_003815177.1|3564010_3564802_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_010929966.1|3565653_3566109_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_010929965.1|3566127_3567054_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929964.1|3567107_3568394_-	cytochrome c	NA	NA	NA	NA	NA
WP_003815183.1|3569324_3570197_+	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929963.1|3570193_3571144_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_005012067.1|3571242_3572193_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
