The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP010251	Bordetella pertussis strain I468 chromosome, complete genome	4106401	27282	70036	4106401	transposase,tRNA	Synechococcus_phage(50.0%)	41	NA	NA
WP_010930363.1|27282_28233_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_019247164.1|29141_30359_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|32214_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|34625_35576_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|37012_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41318_42212_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_010929588.1|43663_44614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|45200_45749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45720_45957_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46084_46978_+	AEC family transporter	NA	NA	NA	NA	NA
WP_010929590.1|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|50141_51092_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|51134_52391_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|54362_54953_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|54977_55667_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929584.1|57497_58448_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|59248_60475_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_047122776.1|60474_60888_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|61077_62019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248755.1|62442_63417_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929599.1|63473_64055_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010929600.1|64067_64370_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|64488_65547_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|65581_66853_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|67482_68664_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929584.1|69085_70036_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP010251	Bordetella pertussis strain I468 chromosome, complete genome	4106401	77634	136108	4106401	transposase,tRNA	Planktothrix_phage(22.22%)	54	NA	NA
WP_005012067.1|77634_78585_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|78659_79604_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929608.1|79600_81475_-	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
WP_003807102.1|82822_83527_-	DUF2837 family protein	NA	NA	NA	NA	NA
WP_003807104.1|83523_84630_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929610.1|84891_85485_-	sugar transferase	NA	NA	NA	NA	NA
WP_023853419.1|85481_86669_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA	NA
WP_010929612.1|86731_87991_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929613.1|88014_89103_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
WP_010929614.1|89110_90211_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
WP_003807114.1|90214_90790_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_003807115.1|90793_91846_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_010929615.1|91976_92984_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
WP_010929616.1|92985_94272_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_003807124.1|94288_94444_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929617.1|94468_95272_-	type III pantothenate kinase	NA	NA	NA	NA	NA
WP_010929618.1|95268_96135_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_010929619.1|96209_97340_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003807131.1|97339_98179_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
WP_010929620.1|99111_99714_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010929621.1|99743_100397_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003807138.1|100529_101786_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
WP_010929622.1|101833_102733_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_003818417.1|102808_103084_+	YbeD family protein	NA	NA	NA	NA	NA
WP_010929623.1|103091_103754_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_003807146.1|103815_104817_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_003807148.1|104831_105380_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
WP_010929624.1|105437_106334_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_010929625.1|106330_107392_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
WP_077069213.1|107427_108378_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|109277_110471_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|110552_111182_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|111243_111927_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|111936_113619_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|113906_114254_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|114344_114662_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|114944_115961_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|116036_116837_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|116833_117709_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|117719_119012_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|119054_120095_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|120200_121022_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|121122_122073_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905488.1|122171_123077_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
WP_003815918.1|123073_123907_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010929637.1|124743_125754_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_019247800.1|125750_126140_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929638.1|127033_128287_+	amidase	NA	NA	NA	NA	NA
WP_010929639.1|128377_130078_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_010929640.1|130504_131152_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853393.1|131150_132590_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_003815905.1|132682_132985_+	bacterioferritin-associated ferredoxin	NA	NA	NA	NA	NA
WP_010929512.1|133012_133891_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|135157_136108_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP010251	Bordetella pertussis strain I468 chromosome, complete genome	4106401	164893	225404	4106401	transposase,tRNA,protease	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	51	NA	NA
WP_005015810.1|164893_165844_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|167287_168190_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|168167_168797_-	LemA family protein	NA	NA	NA	NA	NA
WP_010929660.1|169079_170510_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.8	5.8e-44
WP_010929661.1|170543_171173_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|171221_172829_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|172853_173537_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|173618_174095_-	bacterioferritin	NA	NA	NA	NA	NA
WP_010929591.1|174301_175252_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929664.1|176367_176895_+	META domain-containing protein	NA	NA	NA	NA	NA
WP_010929665.1|176986_177802_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_003808370.1|177862_178597_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010929666.1|178634_180713_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|180962_181235_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446322.1|181336_182422_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|182425_184330_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_014486044.1|184326_188001_+	translocation/assembly module TamB domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|188061_188625_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|188632_189055_-	VOC family protein	NA	NA	NA	NA	NA
WP_010929671.1|189082_189502_-	VOC family protein	NA	NA	NA	NA	NA
WP_076879599.1|189530_190004_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	31.1	2.2e-11
WP_003808391.1|190103_190601_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|190755_193026_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_010929672.1|193074_194307_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929591.1|194405_195356_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929673.1|195458_196094_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.8e-83
WP_019248671.1|196090_196984_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|197378_198479_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|198560_198935_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|198994_201859_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|202003_202744_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|202813_204025_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|204053_205022_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931070.1|205635_206586_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|206742_207066_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_023853200.1|207170_208211_-	cyclase family protein	NA	NA	NA	NA	NA
WP_010929697.1|208216_208996_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|209041_209338_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|209363_209639_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|209695_210340_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|210339_211026_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010929695.1|211155_212007_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|212057_212783_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|212814_214164_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|214275_215208_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033455792.1|215665_218461_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_010929690.1|219054_221997_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|222068_222788_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|222826_223375_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|223529_224429_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|224453_225404_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP010251	Bordetella pertussis strain I468 chromosome, complete genome	4106401	233336	286924	4106401	transposase,tRNA,protease	Bacillus_phage(25.0%)	48	NA	NA
WP_005012067.1|233336_234287_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|234373_235324_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|235320_236271_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929700.1|236369_237167_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003814363.1|238116_238527_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_003814358.1|239548_240292_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814356.1|240335_241379_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814355.1|241549_243652_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814351.1|245062_246019_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929701.1|246037_246529_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_010929702.1|246525_247881_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929703.1|247881_248580_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929704.1|248576_249278_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_003814339.1|249530_250580_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_003814337.1|250685_251627_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|251623_253513_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814332.1|253599_254238_+	VTT domain-containing protein	NA	NA	NA	NA	NA
WP_019247543.1|254380_255766_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|255696_256233_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|256384_257776_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|257792_258773_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|258908_259892_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|259956_260856_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|260962_262717_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|262724_263849_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|263862_264843_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929591.1|265573_266524_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929712.1|267083_267629_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929713.1|267712_269332_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|269347_270502_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|270515_270641_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|270637_272389_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|272385_274065_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929716.1|274127_274676_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
WP_010929717.1|275818_276097_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|277140_278091_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_173651708.1|278108_278255_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929718.1|278368_278530_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_010929719.1|278537_278678_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815821.1|279196_279646_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_003815819.1|279655_280267_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_019247426.1|280425_281280_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|281299_282682_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|282746_283388_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|283527_283986_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|284010_284787_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|284840_285977_+	trypsin-like peptidase domain-containing protein	NA	W5SAB9	Pithovirus	31.2	1.2e-07
WP_005015810.1|285973_286924_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP010251	Bordetella pertussis strain I468 chromosome, complete genome	4106401	390857	448366	4106401	transposase	Orpheovirus(14.29%)	50	NA	NA
WP_005012067.1|390857_391808_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927231.1|391944_392862_+	reductase	NA	NA	NA	NA	NA
WP_003815842.1|392858_393107_+	glutaredoxin family protein	NA	NA	NA	NA	NA
WP_003815840.1|393103_394309_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486045.1|394381_395377_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486046.1|395399_396620_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486047.1|396616_397261_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248476.1|398991_399801_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486048.1|400105_401059_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	5.6e-59
WP_014486049.1|401157_402141_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486050.1|402067_402769_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486051.1|402817_403588_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_019247259.1|403584_404763_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486052.1|404930_406637_-	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA	NA
WP_014486053.1|406633_407530_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486054.1|407570_409160_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_003807867.1|409209_410202_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807865.1|410270_410870_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486055.1|411330_412311_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929577.1|412386_413337_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122777.1|413425_414340_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929782.1|414336_414996_+	LysE family translocator	NA	NA	NA	NA	NA
WP_003814709.1|415085_416009_+	alpha/beta fold hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
WP_010929783.1|416014_416470_-	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA	NA
WP_010929784.1|416466_417570_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
WP_157734656.1|417528_417798_+	GtrA family protein	NA	NA	NA	NA	NA
WP_010927086.1|417757_419377_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_003814720.1|419373_420432_-	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
WP_033446199.1|420561_421056_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_022997984.1|421148_422126_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929785.1|422321_423527_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_010929786.1|423523_425035_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_003814726.1|425050_426364_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_003814728.1|426554_426734_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814730.1|427143_427878_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
WP_010929577.1|430322_431273_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247421.1|431404_431803_-	GTP-binding protein	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
WP_003814701.1|432213_432684_-	universal stress protein	NA	NA	NA	NA	NA
WP_003820700.1|432772_433117_-	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
WP_010929788.1|433216_434617_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010929789.1|436405_436924_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
WP_003814694.1|437034_437790_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
WP_003814691.1|437985_439218_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929791.1|439210_439996_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_003814685.1|440062_441034_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814681.1|441044_442022_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247419.1|442147_443320_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929793.1|443346_444375_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003814674.1|444440_445634_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|447415_448366_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP010251	Bordetella pertussis strain I468 chromosome, complete genome	4106401	590420	651611	4106401	transposase,protease	uncultured_Mediterranean_phage(40.0%)	56	NA	NA
WP_005013747.1|590420_591371_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023998122.1|591867_592737_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_010931496.1|592733_593555_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_019247235.1|593754_594246_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_019247236.1|594264_595338_+	CHAD domain-containing protein	NA	NA	NA	NA	NA
WP_023853086.1|595384_596488_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_003808577.1|596563_597184_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_003808574.1|597204_597714_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.1	1.2e-28
WP_003808570.1|597768_598020_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.4	1.6e-18
WP_010931494.1|598083_599217_+	benzoate/H(+) symporter BenE family transporter	NA	NA	NA	NA	NA
WP_003808567.1|599224_599611_-	MOSC N-terminal beta barrel domain-containing protein	NA	NA	NA	NA	NA
WP_010931493.1|599607_602127_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003808563.1|602555_602894_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003808562.1|602890_603397_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010931492.1|603458_604259_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931491.1|604369_605311_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931490.1|605404_606940_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931489.1|608619_610470_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.2	1.6e-17
WP_003808549.1|610473_611307_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931488.1|611306_612248_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931487.1|612499_613471_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931486.1|613612_615901_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003808542.1|616207_617116_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010931485.1|617170_618136_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931484.1|618210_619872_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010931483.1|619943_620654_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_154698388.1|620620_620785_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|620802_621753_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814152.1|622451_622835_+	membrane protein	NA	NA	NA	NA	NA
WP_010927005.1|622892_623495_+	DUF2946 family protein	NA	NA	NA	NA	NA
WP_003820995.1|623512_623914_-	DoxX family protein	NA	NA	NA	NA	NA
WP_003814158.1|624047_624941_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931481.1|624937_625519_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_003814165.1|626313_627048_+	arginyltransferase	NA	NA	NA	NA	NA
WP_010931480.1|627088_628138_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_003814172.1|628285_628864_-	TIGR01841 family phasin	NA	NA	NA	NA	NA
WP_010931479.1|629250_630228_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
WP_010931478.1|630321_634716_-	dermonecrotic toxin	NA	NA	NA	NA	NA
WP_003814178.1|634916_635765_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931477.1|635923_636736_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
WP_005015810.1|636791_637742_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931453.1|637840_638641_-	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_003814185.1|638702_639086_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_010931454.1|639097_640531_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
WP_003814188.1|640737_641067_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_010931455.1|641069_641819_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010931456.1|642001_642922_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_003814195.1|642968_643181_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931457.1|643203_643626_+	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_010931458.1|643642_644743_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931459.1|644839_646357_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_003814203.1|646432_647272_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_003814205.1|647293_648175_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814206.1|648256_649351_-	porin	NA	NA	NA	NA	NA
WP_076879617.1|649644_650595_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166340.1|650669_651611_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP010251	Bordetella pertussis strain I468 chromosome, complete genome	4106401	656935	703126	4106401	transposase,tRNA,terminase,tail	uncultured_Caudovirales_phage(18.18%)	51	NA	NA
WP_023995141.1|656935_657961_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814221.1|658001_658241_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931464.1|658310_659900_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_010931465.1|659899_660448_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_003814226.1|660528_661101_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010927008.1|661119_662031_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814230.1|662104_663073_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931466.1|663195_664269_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_010931467.1|664273_666094_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010930800.1|666170_667121_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446132.1|667209_667545_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_003819076.1|667678_668329_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_010931468.1|668350_669769_-	amidase	NA	NA	NA	NA	NA
WP_019248554.1|669838_670594_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247734.1|670562_671321_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931471.1|671331_672213_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931472.1|672229_672937_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931473.1|672939_673698_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931474.1|673907_675650_+	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010925795.1|675642_676167_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931475.1|676206_677001_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248926.1|677168_678242_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|678340_679291_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247378.1|679542_679749_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931451.1|679820_680432_-	S24 family peptidase	NA	NA	NA	NA	NA
WP_023853179.1|680986_681238_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_161633094.1|681230_681920_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853183.1|681937_682159_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|682176_683127_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247942.1|683766_684252_+|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_010931447.1|684238_685516_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_010931446.1|685518_686937_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931445.1|686965_688021_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931444.1|688026_688269_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931443.1|688391_688994_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_005012808.1|689422_690373_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931442.1|691047_691299_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|691361_691844_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_162096760.1|691857_692046_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931439.1|692045_692441_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931438.1|692437_692836_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931437.1|692832_693255_+	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931436.1|693262_693763_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931435.1|694017_694536_+|tail	phage tail protein	tail	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_003813412.1|694545_694875_+|tail	phage tail assembly chaperone	tail	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931434.1|694892_695183_+	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_010931433.1|695208_697821_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931432.1|697830_698190_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931431.1|698257_698791_+	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931430.1|698787_699177_+	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931429.1|699169_703126_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
>prophage 8
NZ_CP010251	Bordetella pertussis strain I468 chromosome, complete genome	4106401	709292	763222	4106401	transposase,tRNA	Planktothrix_phage(50.0%)	46	NA	NA
WP_003814636.1|709292_711023_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_010931419.1|711075_711504_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814641.1|711506_712187_+	protein TolQ	NA	NA	NA	NA	NA
WP_003814643.1|712186_712645_+	protein TolR	NA	NA	NA	NA	NA
WP_010931418.1|712681_713656_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_010931417.1|713672_714989_+	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_003814650.1|715020_715518_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_003814652.1|715604_716294_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_010931416.1|716293_717343_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814657.1|717339_718134_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_019247923.1|718302_718653_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247922.1|718628_719186_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012808.1|720315_721266_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929184.1|723403_724633_+	spore maturation protein	NA	NA	NA	NA	NA
WP_003814419.1|724635_726078_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_010931414.1|726182_727328_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_010931413.1|727359_728157_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931412.1|728181_729741_-	chaperone SurA	NA	NA	NA	NA	NA
WP_010931411.1|729737_732110_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931410.1|732219_733323_+	phosphotransferase	NA	NA	NA	NA	NA
WP_010931409.1|733322_734015_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_003814436.1|734158_734860_+	membrane protein	NA	NA	NA	NA	NA
WP_003814437.1|734844_735222_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_005012067.1|735953_736904_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814441.1|737063_737936_-	oxaloacetate decarboxylase	NA	NA	NA	NA	NA
WP_003814443.1|738276_738495_+	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
WP_019247242.1|738534_739914_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010929976.1|739955_741353_-	amidase family protein	NA	NA	NA	NA	NA
WP_010927038.1|741392_743045_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
WP_010929977.1|743048_743933_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929978.1|743932_744874_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929979.1|744952_746572_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929980.1|746738_747554_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814459.1|747621_748191_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|748191_749142_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814461.1|749796_750894_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_003814462.1|750927_752193_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929591.1|752350_753301_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929982.1|753544_754135_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929983.1|754150_756595_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_003814467.1|756714_757686_-	FecR family protein	NA	NA	NA	NA	NA
WP_023852739.1|757817_758342_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_005012067.1|758301_759252_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929984.1|759473_761669_-	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_010929985.1|761741_762170_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012808.1|762271_763222_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP010251	Bordetella pertussis strain I468 chromosome, complete genome	4106401	854100	903364	4106401	transposase,holin	Vibrio_phage(33.33%)	40	NA	NA
WP_010929591.1|854100_855051_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247352.1|855068_855623_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813949.1|855624_856059_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003813951.1|856055_856490_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003813952.1|856473_857277_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_003813954.1|857293_858109_-	metallophosphoesterase	NA	NA	NA	NA	NA
WP_019248500.1|858105_858921_-	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_010930033.1|859067_859769_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813960.1|859796_861755_-|holin	choline BCCT transporter BetT	holin	A0A2I7QNT1	Vibrio_phage	30.3	8.0e-28
WP_005013747.1|861837_862788_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930032.1|863008_863677_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_010930031.1|863800_864907_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010930030.1|864919_868033_+	MexW/MexI family multidrug efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.5	4.5e-57
WP_010930029.1|868029_869523_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010926969.1|869537_870209_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_003813974.1|870252_870747_-	azurin	NA	NA	NA	NA	NA
WP_010930027.1|870887_871535_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_023853163.1|871638_873687_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010930025.1|873683_875696_+	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010930024.1|875721_877056_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_003813981.1|877164_878157_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813982.1|878223_880308_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_010930023.1|880332_881304_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930022.1|881432_882464_-	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_010930021.1|882467_883619_-	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_076879542.1|883789_884713_+	transcriptional regulator LrhA	NA	NA	NA	NA	NA
WP_003813987.1|884790_885615_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_023994644.1|885811_886828_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003813988.1|887024_888008_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930019.1|889606_890995_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003813991.1|891025_892015_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813992.1|892125_893358_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003813993.1|893639_894440_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930018.1|894462_896694_-|holin	choline BCCT transporter BetT	holin	NA	NA	NA	NA
WP_010930017.1|897481_897928_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_003813996.1|897949_898696_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_003813997.1|898839_899817_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930016.1|900450_901062_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
WP_003813999.1|901055_902273_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_005013747.1|902413_903364_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP010251	Bordetella pertussis strain I468 chromosome, complete genome	4106401	912976	1048286	4106401	transposase	Bacillus_phage(11.11%)	115	NA	NA
WP_005012067.1|912976_913927_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930051.1|913923_915756_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_010930052.1|916154_916814_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_023852837.1|916907_917054_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809770.1|917162_917330_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930054.1|917341_918022_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_010930055.1|918303_919020_+	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930056.1|919034_920336_-	phospholipase A	NA	NA	NA	NA	NA
WP_029444137.1|922480_925369_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930057.1|925592_926945_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_004568140.1|926973_927495_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_003819989.1|927491_928946_+	carboxylase	NA	NA	NA	NA	NA
WP_023852826.1|928980_929229_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247557.1|929334_930210_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010930060.1|930235_931291_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930061.1|931303_932095_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930062.1|932127_933498_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_005012067.1|934674_935625_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930064.1|935677_935899_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810832.1|936058_936271_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|936390_937509_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810839.1|938014_938266_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930066.1|938378_939329_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810840.1|939325_939709_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_023852913.1|939763_941578_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_010930068.1|941727_942555_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_010930069.1|942600_943581_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003810850.1|943577_943790_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810851.1|943786_944968_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_019248496.1|945131_945866_+	metallophosphoesterase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_010930071.1|945867_948480_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_003810859.1|948615_950529_-	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930072.1|951144_951555_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810865.1|951652_952738_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_005012067.1|952836_953787_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930088.1|953783_954758_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003821497.1|954882_955794_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
WP_004566317.1|956070_956463_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
WP_005012808.1|956592_957543_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930090.1|957572_957755_-	type II toxin-antitoxin system HicA family toxin	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
WP_010930091.1|958527_959709_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930092.1|959924_960602_-	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_010930093.1|960598_961324_-	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	NA	NA	NA	NA
WP_010930094.1|961449_962031_-	OmpA family protein	NA	NA	NA	NA	NA
WP_010930095.1|962401_965083_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
WP_010930096.1|965082_966216_+	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	44.0	6.4e-78
WP_010930097.1|966208_967294_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_010930098.1|967380_968280_+	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010930099.1|968276_969605_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_010930100.1|969619_970291_+	(d)CMP kinase	NA	NA	NA	NA	NA
WP_010930101.1|970478_972194_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_010930102.1|972195_972555_+	integration host factor subunit beta	NA	NA	NA	NA	NA
WP_010930103.1|972746_973061_+	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
WP_010930104.1|973103_974324_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
WP_010930105.1|974320_975262_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
WP_003821513.1|975258_976248_+	ADP-glyceromanno-heptose 6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
WP_033446303.1|976282_976867_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929577.1|976965_977916_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|978014_978965_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486062.1|979045_979957_+	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
WP_010930108.1|980017_981163_-	lytic murein transglycosylase B	NA	NA	NA	NA	NA
WP_003821521.1|981182_982097_+	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
WP_010930110.1|982168_982918_+	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_010930111.1|982917_983847_+	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
WP_003821527.1|984090_985917_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003813333.1|985999_986641_+	peroxiredoxin	NA	NA	NA	NA	NA
WP_170954292.1|986863_987865_+	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930112.1|989701_990766_+	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
WP_010930113.1|991563_992472_+	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_023852693.1|993964_995239_+	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
WP_023852686.1|995392_995773_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014905652.1|995780_996653_-	EamA family transporter	NA	NA	NA	NA	NA
WP_003813315.1|996958_997339_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_003813314.1|997549_998275_+	CoA pyrophosphatase	NA	NA	NA	NA	NA
WP_005012067.1|998370_999321_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|999425_1000475_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_010929632.1|1000612_1001629_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010926548.1|1003137_1003710_-	chorismate lyase	NA	NA	NA	NA	NA
WP_010930119.1|1003769_1004501_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_029443805.1|1004552_1005470_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930121.1|1006277_1009457_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_062826578.1|1009453_1010836_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930123.1|1010905_1011157_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_010930124.1|1011302_1011917_-	SCO family protein	NA	NA	NA	NA	NA
WP_019248379.1|1012103_1014218_-	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_003811948.1|1014293_1015145_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_010930126.1|1015141_1015768_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003817147.1|1015764_1017519_-	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930127.1|1017811_1020517_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_010930128.1|1020529_1022191_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930129.1|1022203_1023994_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_003817151.1|1024215_1025391_-	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010929584.1|1025433_1026384_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930130.1|1026482_1027223_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_010930131.1|1027417_1029454_+	transketolase	NA	NA	NA	NA	NA
WP_010930132.1|1029471_1030482_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010930133.1|1030599_1031793_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_010930134.1|1031822_1032596_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010930135.1|1032592_1033783_-	acetate kinase	NA	NA	NA	NA	NA
WP_003809454.1|1033808_1034747_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_010930136.1|1034743_1037092_-	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
WP_010930137.1|1037246_1037888_-	glutathione transferase	NA	NA	NA	NA	NA
WP_023853531.1|1037991_1039125_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994624.1|1039217_1039370_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930138.1|1039401_1039950_-	DinB family protein	NA	NA	NA	NA	NA
WP_003819814.1|1039968_1040454_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930139.1|1040631_1041570_+	DnaJ domain-containing protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
WP_003809467.1|1041572_1041890_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247197.1|1041935_1042880_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010930141.1|1044560_1045211_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_003809479.1|1045264_1045600_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930142.1|1045596_1046457_+	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
WP_003819817.1|1046473_1046755_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003809486.1|1046828_1047092_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_005012067.1|1047335_1048286_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP010251	Bordetella pertussis strain I468 chromosome, complete genome	4106401	1060504	1117886	4106401	transposase,tRNA,holin	uncultured_Mediterranean_phage(37.5%)	47	NA	NA
WP_010931363.1|1060504_1061521_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930148.1|1062309_1063359_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_014486064.1|1063355_1064999_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_010930149.1|1064995_1065883_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003809396.1|1066023_1066497_-	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930151.1|1066486_1067509_-	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_015041211.1|1067505_1068933_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010931363.1|1069870_1070887_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003809411.1|1071219_1072155_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
WP_010930154.1|1072204_1074085_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_003809416.1|1074151_1074496_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
WP_010930155.1|1074640_1075777_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_023853534.1|1075773_1076847_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_003809423.1|1077004_1078441_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_010930157.1|1078531_1079173_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023853536.1|1079508_1080525_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930160.1|1083671_1085093_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_003809431.1|1085356_1086073_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809432.1|1086157_1086475_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003819794.1|1086515_1086929_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_010930161.1|1086930_1087290_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853525.1|1087332_1088877_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930163.1|1088960_1089791_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_010930164.1|1089825_1090980_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930165.1|1091022_1091895_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486065.1|1092011_1094300_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003809441.1|1095506_1095971_+	barstar family protein	NA	NA	NA	NA	NA
WP_005013747.1|1095997_1096948_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154698393.1|1096965_1097103_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930167.1|1097315_1098092_-	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_003809638.1|1098136_1098994_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930169.1|1099015_1100032_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_014486066.1|1100166_1101207_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930171.1|1101401_1103483_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_010930172.1|1103718_1105212_+	exopolyphosphatase	NA	NA	NA	NA	NA
WP_003809629.1|1105442_1106237_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003819875.1|1106457_1107816_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_010930173.1|1107812_1108655_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_010930174.1|1108673_1110560_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_162096758.1|1110501_1110753_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930175.1|1110797_1111430_-	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_003809618.1|1111448_1112051_+	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|1112202_1113153_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_161633091.1|1113733_1114441_+	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_003812707.1|1114799_1115786_-	homoserine kinase	NA	NA	NA	NA	NA
WP_010930178.1|1115925_1116939_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_005012067.1|1116935_1117886_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP010251	Bordetella pertussis strain I468 chromosome, complete genome	4106401	1317955	1386442	4106401	transposase	Planktothrix_phage(33.33%)	56	NA	NA
WP_005012808.1|1317955_1318906_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930283.1|1319674_1320313_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_019247793.1|1321202_1321649_+	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_010930284.1|1321730_1322432_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.4	1.3e-17
WP_003811277.1|1322432_1323200_-	high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.2e-14
WP_010930285.1|1323196_1324435_-	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA	NA
WP_003811272.1|1324434_1325361_-	high-affinity branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA	NA
WP_010930286.1|1325463_1326579_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005015810.1|1326594_1327545_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930287.1|1327898_1328480_-	queuosine precursor transporter	NA	A0A2I7SAW6	Vibrio_phage	37.3	9.4e-17
WP_003811267.1|1328476_1329310_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
WP_010930288.1|1329520_1330834_+	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA	NA
WP_003811262.1|1331010_1331892_+	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA	NA
WP_003811259.1|1331911_1332763_+	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA	NA
WP_010930289.1|1332815_1333904_+	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	31.2	2.2e-19
WP_010930290.1|1334014_1335142_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003811244.1|1335376_1335988_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_005012808.1|1336086_1337037_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811293.1|1337258_1337636_-	DUF423 domain-containing protein	NA	NA	NA	NA	NA
WP_003811295.1|1337783_1338281_+	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_010930291.1|1338277_1338805_+	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_003811298.1|1338938_1339754_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930292.1|1339766_1340948_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_003811301.1|1340995_1341889_-	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
WP_010930293.1|1342015_1342486_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930294.1|1342611_1343439_-	DUF3298 domain-containing protein	NA	NA	NA	NA	NA
WP_010930295.1|1344530_1344995_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930296.1|1345006_1345708_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_003811310.1|1345817_1346318_-	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	38.4	4.7e-25
WP_010930297.1|1346400_1347579_-	DUF1501 domain-containing protein	NA	NA	NA	NA	NA
WP_003811313.1|1349206_1349542_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_010930298.1|1349729_1351178_+	CoA transferase	NA	NA	NA	NA	NA
WP_023852799.1|1351235_1351580_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	58.4	3.0e-31
WP_003811316.1|1351686_1352226_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_005012067.1|1352318_1353269_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268679.1|1353286_1353526_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247530.1|1354007_1354439_-	YXWGXW repeat-containing protein	NA	NA	NA	NA	NA
WP_010930300.1|1354620_1355025_-	DoxX family protein	NA	NA	NA	NA	NA
WP_010930301.1|1356261_1356585_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247533.1|1356587_1357475_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003811322.1|1357507_1357933_-	universal stress protein	NA	NA	NA	NA	NA
WP_019247534.1|1358004_1358358_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811324.1|1358597_1359104_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930302.1|1359142_1360474_-	transcriptional regulator PtsJ	NA	NA	NA	NA	NA
WP_003811326.1|1360533_1361349_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010930303.1|1361345_1362200_+	pyridoxine/pyridoxal/pyridoxamine kinase	NA	NA	NA	NA	NA
WP_010930304.1|1365262_1367806_-	malto-oligosyltrehalose synthase	NA	NA	NA	NA	NA
WP_010930305.1|1369172_1370927_-	malto-oligosyltrehalose trehalohydrolase	NA	NA	NA	NA	NA
WP_010930306.1|1370923_1373044_-	glycogen debranching protein GlgX	NA	NA	NA	NA	NA
WP_010930307.1|1373048_1375244_-	1,4-alpha-glucan branching protein GlgB	NA	NA	NA	NA	NA
WP_010930308.1|1375240_1378582_-	maltose alpha-D-glucosyltransferase	NA	NA	NA	NA	NA
WP_010930208.1|1381384_1382335_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811361.1|1382400_1382580_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247449.1|1382696_1383452_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010930310.1|1383438_1384584_-	DUF3182 family protein	NA	NA	NA	NA	NA
WP_010930208.1|1385491_1386442_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP010251	Bordetella pertussis strain I468 chromosome, complete genome	4106401	1446933	1502421	4106401	transposase,protease	Mollivirus(16.67%)	56	NA	NA
WP_005012067.1|1446933_1447884_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811846.1|1449085_1449532_-	flagellar export protein FliJ	NA	NA	NA	NA	NA
WP_019247562.1|1449524_1451000_-	flagellar protein export ATPase FliI	NA	NA	NA	NA	NA
WP_010930338.1|1450996_1451752_-	flagellar assembly protein FliH	NA	NA	NA	NA	NA
WP_003817203.1|1451744_1452755_-	flagellar motor switch protein FliG	NA	NA	NA	NA	NA
WP_010930339.1|1452744_1454421_-	flagellar M-ring protein FliF	NA	NA	NA	NA	NA
WP_010930340.1|1454733_1455066_+	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA	NA
WP_010930341.1|1455079_1455475_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930342.1|1455484_1455811_-	EscU/YscU/HrcU family type III secretion system export apparatus switch protein	NA	NA	NA	NA	NA
WP_019247563.1|1455807_1456134_-	flagellar hook-length control protein FliK	NA	NA	NA	NA	NA
WP_023994685.1|1456060_1457083_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930343.1|1457079_1457430_-	flagellar protein FliT	NA	NA	NA	NA	NA
WP_010930344.1|1457477_1457906_-	flagellar export chaperone FliS	NA	NA	NA	NA	NA
WP_010930345.1|1457913_1459287_-	flagellar filament capping protein FliD	NA	NA	NA	NA	NA
WP_003817216.1|1459427_1459805_-	flagellar protein FlaG	NA	NA	NA	NA	NA
WP_010930346.1|1460067_1461375_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_023852965.1|1461435_1462266_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_003811815.1|1462262_1462751_+	CvpA family protein	NA	NA	NA	NA	NA
WP_003811814.1|1462792_1464313_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	43.7	4.8e-97
WP_003811812.1|1464356_1464833_-	disulfide bond formation protein B	NA	NA	NA	NA	NA
WP_010930348.1|1465636_1468234_-	[protein-PII] uridylyltransferase	NA	NA	NA	NA	NA
WP_003811806.1|1468263_1469085_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_003811803.1|1469811_1470561_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_010926570.1|1470744_1471623_+	elongation factor Ts	NA	NA	NA	NA	NA
WP_010930349.1|1471720_1472437_+	UMP kinase	NA	NA	NA	NA	NA
WP_003811796.1|1472451_1473012_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_010930350.1|1473178_1473943_+	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	36.1	1.7e-18
WP_010930351.1|1473962_1474820_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003811788.1|1474816_1476016_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_010930352.1|1476055_1477390_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_010930353.1|1477442_1479779_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_003811782.1|1479904_1480468_+	OmpH family outer membrane protein	NA	NA	NA	NA	NA
WP_010930354.1|1480476_1481568_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_003811776.1|1481639_1482095_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_010930355.1|1482095_1482890_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_010930356.1|1482886_1484068_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_003811770.1|1484054_1484660_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	40.2	8.8e-26
WP_003811768.1|1484656_1485430_+	RNA methyltransferase	NA	NA	NA	NA	NA
WP_010930357.1|1485441_1486269_-	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_010930358.1|1486430_1488794_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	35.9	2.2e-165
WP_010930359.1|1488861_1489581_-	glutamine amidotransferase	NA	NA	NA	NA	NA
WP_003811761.1|1489704_1490130_+	NfeD family protein	NA	NA	NA	NA	NA
WP_005012067.1|1490164_1491115_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811759.1|1491232_1492159_+	paraslipin	NA	NA	NA	NA	NA
WP_010930360.1|1492224_1493382_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811754.1|1493362_1493830_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_010930800.1|1493977_1494928_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811752.1|1494944_1495379_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_003811750.1|1495368_1495719_+	RnfH family protein	NA	NA	NA	NA	NA
WP_003811748.1|1495915_1497070_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003811746.1|1497066_1498239_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811743.1|1498286_1499180_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811741.1|1499225_1499663_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010930362.1|1499722_1500412_+	VIT family protein	NA	NA	NA	NA	NA
WP_010929577.1|1500421_1501372_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879624.1|1501470_1502421_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP010251	Bordetella pertussis strain I468 chromosome, complete genome	4106401	1597118	1665204	4106401	transposase,tRNA	Streptococcus_virus(11.11%)	59	NA	NA
WP_010930416.1|1597118_1597607_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_019248504.1|1597724_1598303_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010930418.1|1598408_1598777_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|1598875_1599826_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994932.1|1599832_1600945_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_010930419.1|1601631_1602834_+	MFS transporter	NA	NA	NA	NA	NA
WP_004568212.1|1602869_1603016_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930420.1|1603037_1605698_+	PD-(D/E)XK nuclease family protein	NA	NA	NA	NA	NA
WP_010930421.1|1605710_1609115_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_023995689.1|1609782_1612008_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
WP_010930423.1|1612054_1612381_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_010930424.1|1612431_1613040_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_005013747.1|1613138_1614089_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930425.1|1614158_1614923_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930426.1|1614919_1615519_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930427.1|1615622_1616474_-	neutral zinc metallopeptidase	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
WP_010928449.1|1616533_1617160_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_005012067.1|1617156_1618107_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019249265.1|1618205_1619318_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_019248041.1|1619307_1620309_-	imelysin family protein	NA	NA	NA	NA	NA
WP_019247498.1|1620414_1621926_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_023853587.1|1621922_1623227_-	imelysin	NA	NA	NA	NA	NA
WP_010930431.1|1623338_1623899_-	membrane protein	NA	NA	NA	NA	NA
WP_010930432.1|1624166_1624721_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
WP_010930433.1|1625176_1625392_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_033446228.1|1625646_1628244_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
WP_010930435.1|1628240_1629428_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010930436.1|1630086_1630701_+	serotype 3 fimbrial subunit	NA	NA	NA	NA	NA
WP_010930437.1|1630789_1631917_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_033446216.1|1631928_1632834_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_005012067.1|1633726_1634677_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930439.1|1634858_1635611_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_003811112.1|1635679_1636339_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_003811113.1|1636335_1637064_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
WP_010930440.1|1637076_1639356_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
WP_010930441.1|1639380_1639584_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_010930442.1|1639625_1640258_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	2.4e-13
WP_010930443.1|1640393_1641311_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_010930444.1|1641307_1642021_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_003811135.1|1642258_1643029_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003811137.1|1643033_1643633_-	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
WP_003811138.1|1643877_1645368_+	AMP nucleosidase	NA	NA	NA	NA	NA
WP_010926696.1|1645426_1645711_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930445.1|1645848_1646004_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811148.1|1646276_1647203_-	YicC family protein	NA	NA	NA	NA	NA
WP_003811149.1|1647339_1648080_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_010930446.1|1648246_1649623_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003811152.1|1649804_1650710_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930448.1|1652361_1654164_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010930449.1|1654290_1654932_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_005012808.1|1655030_1655981_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930450.1|1656002_1657223_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_003811164.1|1657408_1658821_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_003811167.1|1658884_1659952_+	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_010930451.1|1659951_1661439_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_010930452.1|1661448_1662393_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811176.1|1662552_1663251_+	pirin family protein	NA	NA	NA	NA	NA
WP_010930453.1|1663328_1664234_+	pirin family protein	NA	NA	NA	NA	NA
WP_005012067.1|1664253_1665204_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP010251	Bordetella pertussis strain I468 chromosome, complete genome	4106401	1701153	1756744	4106401	transposase	Brazilian_cedratvirus(25.0%)	47	NA	NA
WP_005013747.1|1701153_1702104_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930486.1|1702162_1702936_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486074.1|1702928_1704485_+	LTA synthase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1704481_1705432_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810741.1|1706758_1707361_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810743.1|1707600_1708302_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003816696.1|1708295_1709078_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_005012808.1|1709262_1710213_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930483.1|1710311_1711049_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010926609.1|1711238_1711997_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930482.1|1712043_1713033_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930481.1|1713210_1714179_-	transporter	NA	NA	NA	NA	NA
WP_010930480.1|1715718_1716687_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930479.1|1716695_1717637_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|1718110_1719121_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930477.1|1719111_1720626_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930476.1|1720622_1721969_+	BatD family protein	NA	NA	NA	NA	NA
WP_010930475.1|1721971_1723006_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_023852967.1|1723055_1724681_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_005012067.1|1725233_1726184_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930487.1|1726288_1727236_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247865.1|1727289_1729104_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010930489.1|1729096_1729771_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023995112.1|1729900_1732975_+	autotransporter SphB2	NA	NA	NA	NA	NA
WP_019247905.1|1732988_1733288_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930492.1|1733602_1734226_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_010930493.1|1734469_1735339_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010930494.1|1735316_1736261_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247909.1|1736346_1737273_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247910.1|1737385_1738165_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930497.1|1738155_1739352_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010930498.1|1739382_1740333_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_010930499.1|1740554_1741244_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930500.1|1741308_1742064_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930501.1|1742115_1743108_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930502.1|1743117_1744071_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811538.1|1744186_1745149_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249376.1|1746550_1746979_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931070.1|1746975_1747926_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_170954298.1|1748219_1748957_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_010930504.1|1749380_1750568_-	MFS transporter	NA	NA	NA	NA	NA
WP_019249653.1|1750571_1750952_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930506.1|1752671_1753643_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930507.1|1753656_1754370_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930508.1|1754374_1755292_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811452.1|1755398_1755695_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929588.1|1755793_1756744_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP010251	Bordetella pertussis strain I468 chromosome, complete genome	4106401	1989508	2059160	4106401	transposase,tRNA	Staphylococcus_phage(16.67%)	55	NA	NA
WP_003818515.1|1989508_1992166_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	39.0	3.3e-173
WP_010930709.1|1992243_1993446_-	MFS transporter	NA	NA	NA	NA	NA
WP_003810260.1|1993442_1993955_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247822.1|1994077_1994515_-	HU family DNA-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|1994791_1995742_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_062826579.1|1995840_1996791_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930710.1|1997044_1998850_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.2e-19
WP_010930711.1|1998963_1999131_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_003810297.1|1999194_1999431_-	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_010930712.1|1999799_2000999_-	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_010929591.1|2002514_2003465_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818523.1|2003916_2004918_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810306.1|2005090_2005948_+	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003810308.1|2005944_2007207_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003818524.1|2007307_2007682_+	tautomerase family protein	NA	NA	NA	NA	NA
WP_010930713.1|2007754_2008942_+	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_010930714.1|2009026_2009797_+	spermidine synthase	NA	NA	NA	NA	NA
WP_010930715.1|2009910_2010675_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930716.1|2010625_2011927_+	malonyl-CoA decarboxylase family protein	NA	NA	NA	NA	NA
WP_010930717.1|2011923_2012730_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003818532.1|2014474_2015446_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818533.1|2015602_2016115_+	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_010930718.1|2016273_2017248_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930719.1|2018248_2019043_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_003818535.1|2019068_2019875_-	TOBE domain-containing protein	NA	NA	NA	NA	NA
WP_003810329.1|2019985_2020576_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|2020586_2021765_+	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_010930721.1|2021867_2022242_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_019248531.1|2022494_2023826_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_019247651.1|2023892_2027123_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_003810344.1|2028613_2029360_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_010930724.1|2029444_2029906_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_010930725.1|2029943_2031002_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930726.1|2030964_2032794_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_003810356.1|2032833_2033406_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930727.1|2034830_2035652_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	4.1e-42
WP_010930728.1|2035970_2037293_+	isocitrate lyase	NA	NA	NA	NA	NA
WP_010930729.1|2037652_2038288_+	membrane protein	NA	NA	NA	NA	NA
WP_010930730.1|2038247_2039198_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930731.1|2040068_2040941_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930732.1|2041018_2042158_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930733.1|2042516_2043773_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_003816691.1|2043778_2044306_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_003816690.1|2044310_2045129_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816687.1|2045128_2045851_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930735.1|2045872_2046187_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930736.1|2046204_2047353_+	CoA transferase	NA	NA	NA	NA	NA
WP_010930737.1|2047383_2048259_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816680.1|2048255_2049575_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_014486081.1|2049647_2050844_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_010930739.1|2050854_2052342_-	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_010930740.1|2054936_2055836_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852887.1|2055973_2056939_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005015810.1|2057037_2057988_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2058209_2059160_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP010251	Bordetella pertussis strain I468 chromosome, complete genome	4106401	2070656	2120052	4106401	transposase	Erysipelothrix_phage(16.67%)	45	NA	NA
WP_005013747.1|2070656_2071607_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812172.1|2072744_2073041_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247707.1|2073215_2074568_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
WP_010930153.1|2074710_2075727_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930748.1|2077706_2078720_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_010930749.1|2078806_2079712_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812179.1|2079868_2080213_+	exported protein	NA	NA	NA	NA	NA
WP_010930750.1|2080370_2080829_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_010930751.1|2080842_2083059_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_003812183.1|2083055_2084117_+	XdhC family protein	NA	NA	NA	NA	NA
WP_010930752.1|2084145_2085120_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930753.1|2085071_2085890_-	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
WP_003812191.1|2085902_2086511_-	LON peptidase substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930754.1|2086685_2087081_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930755.1|2087099_2088539_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
WP_003812199.1|2088567_2088915_+	GFA family protein	NA	NA	NA	NA	NA
WP_010929577.1|2088933_2089884_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2090536_2091487_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997035.1|2091570_2093388_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_019247659.1|2093461_2094109_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|2094121_2095051_-	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_014905663.1|2095220_2095685_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816977.1|2095932_2096613_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003816975.1|2096661_2098353_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_010930760.1|2098368_2098920_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816971.1|2098916_2099288_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930761.1|2099400_2100237_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_029443822.1|2100247_2100772_-	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|2100869_2101049_+	DUF3008 family protein	NA	NA	NA	NA	NA
WP_010930763.1|2101178_2102153_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003816964.1|2102283_2102640_+	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930764.1|2102629_2103505_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_010930765.1|2103603_2104488_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930766.1|2104509_2105805_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_003816959.1|2106753_2107404_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930767.1|2107491_2109012_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930768.1|2109269_2111135_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2112180_2113131_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268681.1|2113148_2113289_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930769.1|2114103_2114463_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_010930770.1|2114450_2115887_-	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930771.1|2115883_2116537_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930772.1|2116533_2117727_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930773.1|2117830_2119105_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_005012067.1|2119101_2120052_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP010251	Bordetella pertussis strain I468 chromosome, complete genome	4106401	2131256	2199632	4106401	transposase,tRNA,protease	Klosneuvirus(22.22%)	58	NA	NA
WP_005013747.1|2131256_2132207_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122784.1|2132166_2132580_-	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
WP_003816708.1|2132864_2133164_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930783.1|2133573_2135856_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.2e-36
WP_010930784.1|2136541_2138572_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
WP_006218592.1|2138591_2138804_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_003810720.1|2139081_2139621_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023852902.1|2139734_2141030_-	adenylosuccinate synthase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
WP_010930786.1|2141106_2142264_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_010930787.1|2142447_2143347_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_010930788.1|2143365_2144670_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930789.1|2144635_2145742_-	GTPase HflX	NA	NA	NA	NA	NA
WP_003810707.1|2145829_2146066_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930790.1|2146204_2147275_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810703.1|2147278_2148634_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_003810701.1|2148660_2149821_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_010930791.1|2149823_2150462_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_023995843.1|2150463_2151750_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930793.1|2151808_2153104_-	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_003810693.1|2153110_2153617_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_004568542.1|2153613_2154762_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810689.1|2154789_2155215_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_010930794.1|2155537_2158420_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_023852900.1|2158512_2159268_-	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930796.1|2160033_2161383_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_076879566.1|2161481_2162432_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930048.1|2162530_2163481_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930594.1|2163554_2164028_+	RidA family protein	NA	NA	NA	NA	NA
WP_010930593.1|2164053_2165262_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_003816734.1|2165258_2166032_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_014905757.1|2166031_2166655_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_010926757.1|2166820_2167081_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_010930591.1|2167384_2167966_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004568544.1|2168032_2168287_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930590.1|2168273_2170898_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
WP_010930589.1|2170969_2171788_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810661.1|2171784_2172390_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_010930588.1|2172427_2173561_-	general secretion pathway protein	NA	NA	NA	NA	NA
WP_010930587.1|2175276_2175651_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930586.1|2175748_2177023_-	type 4b pilus protein PilO2	NA	NA	NA	NA	NA
WP_010930585.1|2177026_2178604_-	lipoprotein	NA	NA	NA	NA	NA
WP_010930584.1|2179510_2180866_-	amidase	NA	NA	NA	NA	NA
WP_010930583.1|2180862_2182497_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	8.2e-18
WP_010930582.1|2182489_2183320_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003810637.1|2183337_2184282_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930581.1|2184334_2185909_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247553.1|2185956_2186316_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247554.1|2186308_2186629_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247555.1|2186744_2187677_+	acyclic terpene utilization AtuA family protein	NA	NA	NA	NA	NA
WP_003818676.1|2187779_2188736_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810623.1|2188885_2190223_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010930578.1|2190227_2191484_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_010930577.1|2191679_2192726_-	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_003818672.1|2192783_2193152_-	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_010930576.1|2193282_2194155_-	MOSC N-terminal beta barrel domain-containing protein	NA	NA	NA	NA	NA
WP_003818670.1|2194231_2195134_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930574.1|2196190_2197408_-	four-carbon acid sugar kinase family protein	NA	NA	NA	NA	NA
WP_010929577.1|2198681_2199632_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP010251	Bordetella pertussis strain I468 chromosome, complete genome	4106401	2214910	2279731	4106401	transposase,tRNA,protease	Lake_Baikal_phage(20.0%)	54	NA	NA
WP_005012067.1|2214910_2215861_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247934.1|2216431_2216644_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247935.1|2216661_2217393_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812478.1|2217427_2218069_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010930565.1|2218061_2218730_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010930564.1|2220942_2221719_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930563.1|2221740_2222898_-	thiolase	NA	NA	NA	NA	NA
WP_003812491.1|2222894_2223326_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_015063637.1|2223322_2224126_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930561.1|2224139_2224541_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010930560.1|2224607_2225579_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930559.1|2225644_2226868_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247936.1|2227095_2228046_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930557.1|2228169_2230623_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
WP_010930556.1|2230811_2232116_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
WP_003812508.1|2232220_2232874_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
WP_010930555.1|2232876_2234187_-	trigger factor	NA	NA	NA	NA	NA
WP_010930554.1|2234383_2234944_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
WP_010930553.1|2235055_2235256_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
WP_003812519.1|2235601_2236168_-	DUF924 family protein	NA	NA	NA	NA	NA
WP_010930551.1|2236251_2236455_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
WP_003812524.1|2236761_2237082_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812526.1|2237123_2237405_-	membrane protein	NA	NA	NA	NA	NA
WP_010930550.1|2237479_2238736_-	autotransporter Phg	NA	NA	NA	NA	NA
WP_010930549.1|2239118_2239448_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003812536.1|2241018_2241840_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
WP_010930548.1|2241839_2242979_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
WP_019247938.1|2242985_2243882_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_010930546.1|2243878_2245804_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
WP_010926400.1|2246163_2248776_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_003812546.1|2248828_2251129_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
WP_003812548.1|2251125_2252334_-	fatty acid desaturase	NA	NA	NA	NA	NA
WP_010930545.1|2252595_2252970_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2252966_2253917_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930544.1|2254015_2255317_-	RsmB/NOP family class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA	NA
WP_010930543.1|2256069_2257035_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_010930542.1|2257024_2259886_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_010930541.1|2259888_2260395_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930540.1|2260499_2261708_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_033446178.1|2261709_2262648_-	membrane protein	NA	NA	NA	NA	NA
WP_010930538.1|2262809_2263283_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|2263279_2264230_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566334.1|2264340_2264781_-	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_010930537.1|2264909_2266139_-	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_004566336.1|2266177_2266999_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_029443743.1|2267052_2268204_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930535.1|2268295_2268784_-	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
WP_019247811.1|2271334_2273884_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930533.1|2273954_2276528_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_003813568.1|2276793_2276994_+	CsbD family protein	NA	NA	NA	NA	NA
WP_003813570.1|2277025_2277187_+	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_003813572.1|2277244_2277583_+	BON domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2277731_2278682_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2278780_2279731_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP010251	Bordetella pertussis strain I468 chromosome, complete genome	4106401	2351456	2415034	4106401	transposase,protease	uncultured_Caudovirales_phage(11.11%)	49	NA	NA
WP_010931070.1|2351456_2352407_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809615.1|2352708_2353185_-	transcription elongation factor GreA	NA	NA	NA	NA	NA
WP_019247142.1|2353808_2355446_+	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	30.2	8.8e-12
WP_003809610.1|2355476_2356790_-	pyrimidine permease	NA	Q9KX94	Enterobacteria_phage	67.1	2.1e-149
WP_004568205.1|2356923_2357241_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023852827.1|2357341_2358664_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|2358660_2359611_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2359709_2360660_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930836.1|2361189_2362212_-	putative 2-aminoethylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003820286.1|2362240_2363071_-	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA	NA
WP_029443740.1|2363087_2364785_-	putative 2-aminoethylphosphonate ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930838.1|2364849_2365926_-	putative 2-aminoethylphosphonate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.8	1.2e-28
WP_010930839.1|2366085_2366949_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930840.1|2366979_2367549_+	phosphohydrolase	NA	NA	NA	NA	NA
WP_010930841.1|2367565_2368417_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_003813142.1|2369474_2370356_+|protease	protease HtpX	protease	NA	NA	NA	NA
WP_010930842.1|2370430_2371420_-	quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930843.1|2371482_2372433_-	DMT family transporter	NA	NA	NA	NA	NA
WP_003813147.1|2372495_2373353_+	DMT family transporter	NA	NA	NA	NA	NA
WP_003813149.1|2373412_2373901_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930844.1|2375473_2376664_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010930845.1|2376660_2378247_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010930846.1|2378265_2379333_-	tartrate dehydrogenase	NA	NA	NA	NA	NA
WP_010930847.1|2379437_2380982_-	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	25.4	3.1e-14
WP_010930848.1|2381401_2382976_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930849.1|2383083_2384100_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003813165.1|2384096_2384936_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930850.1|2384940_2386578_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	3.6e-21
WP_005013747.1|2386574_2387525_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268683.1|2387542_2387686_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930851.1|2387667_2388942_+	4-aminobutyrate--2-oxoglutarate transaminase	NA	A0A1V0SKB7	Klosneuvirus	27.9	1.6e-24
WP_010930852.1|2388971_2389262_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_047122810.1|2389334_2390348_+	histone deacetylase family protein	NA	A0A2K9L4C2	Tupanvirus	35.2	1.7e-42
WP_010930854.1|2390367_2391630_+	Zn-dependent hydrolase	NA	NA	NA	NA	NA
WP_010930855.1|2391632_2392556_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010930856.1|2392552_2394046_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930857.1|2394056_2394989_-	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
WP_076879554.1|2395170_2396496_+	aspartate aminotransferase family protein	NA	A0A1C9EHH3	Mycobacterium_phage	22.5	1.8e-07
WP_023853659.1|2396530_2397874_-	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
WP_010930860.1|2397946_2399545_-	DUF853 domain-containing protein	NA	A0A248XCZ8	Klebsiella_phage	44.9	1.8e-78
WP_010930861.1|2399621_2400353_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010930862.1|2400420_2401761_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_010930863.1|2401776_2402688_+	oxygen-dependent coproporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_010930864.1|2402678_2403272_+	nicotinate (nicotinamide) nucleotide adenylyltransferase	NA	NA	NA	NA	NA
WP_003813196.1|2403333_2403720_+	ribosome silencing factor	NA	NA	NA	NA	NA
WP_003813199.1|2403731_2404202_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_010930865.1|2404213_2404837_+	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_010930866.1|2404857_2407605_-	autotransporter Vag8	NA	NA	NA	NA	NA
WP_005012808.1|2414083_2415034_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP010251	Bordetella pertussis strain I468 chromosome, complete genome	4106401	2687020	2727689	4106401	transposase,tRNA	Salmonella_phage(33.33%)	42	NA	NA
WP_005012067.1|2687020_2687971_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004567479.1|2688081_2688264_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931004.1|2688363_2688960_-	lipoprotein	NA	NA	NA	NA	NA
WP_010931005.1|2689143_2690235_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003812822.1|2690734_2691145_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931006.1|2691203_2691545_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	42.2	2.8e-13
WP_010931007.1|2691550_2693968_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_010926359.1|2693980_2695003_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.6	1.0e-26
WP_003812832.1|2695077_2695437_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_003812834.1|2695452_2695650_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_010929584.1|2695985_2696936_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816756.1|2697130_2697580_+	dUTP diphosphatase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
WP_005012808.1|2697576_2698527_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931008.1|2698637_2700086_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931009.1|2700200_2700482_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2700585_2701536_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820420.1|2701780_2702494_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_019247724.1|2702616_2702844_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003816758.1|2703138_2703777_-	DedA family protein	NA	NA	NA	NA	NA
WP_010931011.1|2703885_2704920_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_010929591.1|2704916_2705867_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931012.1|2706282_2706807_-	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
WP_004567322.1|2706810_2707080_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931013.1|2707278_2708340_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010931014.1|2708423_2710058_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
WP_010931015.1|2710059_2710863_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931016.1|2710891_2711851_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931017.1|2711854_2713369_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248147.1|2713405_2714410_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931018.1|2714841_2715312_-	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_010931019.1|2715347_2715959_-	LysE family translocator	NA	NA	NA	NA	NA
WP_010931020.1|2715989_2716613_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_010931021.1|2716693_2718226_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931022.1|2718260_2719502_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931023.1|2719545_2720577_-	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
WP_010931024.1|2720573_2721743_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931025.1|2721736_2722417_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931026.1|2722578_2723421_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931027.1|2723583_2724555_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931028.1|2724726_2725605_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931029.1|2725627_2726698_-	FUSC family protein	NA	NA	NA	NA	NA
WP_005013747.1|2726738_2727689_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP010251	Bordetella pertussis strain I468 chromosome, complete genome	4106401	2783154	2856024	4106401	transposase,tRNA	Moraxella_phage(16.67%)	58	NA	NA
WP_003810909.1|2783154_2783571_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931061.1|2783681_2784314_+	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
WP_010931062.1|2784342_2784786_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_003810897.1|2784807_2785899_-	TRAP transporter substrate-binding protein DctP	NA	NA	NA	NA	NA
WP_010931063.1|2785953_2786754_-	aldolase	NA	NA	NA	NA	NA
WP_010931064.1|2786889_2787510_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931065.1|2787649_2788123_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2789262_2790213_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931066.1|2790209_2797871_-	hemagglutinin repeat-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_010931067.1|2798111_2802158_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_003816847.1|2802470_2803052_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931068.1|2803048_2804347_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010931069.1|2804426_2805455_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010931070.1|2805715_2806666_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|2806662_2807613_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931071.1|2807929_2808535_+	fimbrial major subunit FimX	NA	NA	NA	NA	NA
WP_010931072.1|2808588_2809902_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
WP_003813284.1|2809976_2810447_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_010931073.1|2810446_2811235_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
WP_010931074.1|2811245_2812898_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
WP_010929591.1|2812985_2813936_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931075.1|2815097_2815604_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
WP_003813293.1|2815600_2816365_-	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA	NA
WP_010931076.1|2816380_2816665_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
WP_003813298.1|2816729_2817719_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
WP_010931077.1|2817890_2818820_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
WP_003813302.1|2818791_2819478_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
WP_003813303.1|2819511_2820057_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
WP_003813306.1|2820101_2821367_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003813309.1|2821363_2822266_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_019247679.1|2823447_2824392_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931079.1|2824486_2826004_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931080.1|2826045_2827674_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_003811986.1|2827781_2828663_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931081.1|2831775_2832150_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
WP_003812004.1|2832174_2832513_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931082.1|2832556_2834191_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
WP_010931083.1|2834229_2835576_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_003812010.1|2835683_2837105_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_010931084.1|2837174_2837759_-	nitroreductase	NA	NA	NA	NA	NA
WP_005012067.1|2837861_2838812_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931085.1|2838946_2840053_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010931086.1|2840063_2841161_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_010931087.1|2841305_2842511_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_010931088.1|2842517_2843039_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
WP_010931089.1|2843035_2843527_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
WP_003819740.1|2843523_2843775_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_003819741.1|2843755_2844241_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_010931090.1|2844376_2847838_+	DUF748 domain-containing protein	NA	NA	NA	NA	NA
WP_010931091.1|2847855_2848740_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_010931092.1|2848749_2849181_-	lipoprotein	NA	NA	NA	NA	NA
WP_003809348.1|2849427_2849931_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
WP_010931094.1|2850008_2851409_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931095.1|2851483_2852359_-	membrane protein	NA	NA	NA	NA	NA
WP_023853546.1|2852355_2853363_-	biotin synthase BioB	NA	NA	NA	NA	NA
WP_010931097.1|2853830_2854136_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003819753.1|2854226_2854817_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930525.1|2855007_2856024_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP010251	Bordetella pertussis strain I468 chromosome, complete genome	4106401	2859167	2925978	4106401	transposase,protease	uncultured_Mediterranean_phage(28.57%)	50	NA	NA
WP_023995489.1|2859167_2860118_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2860216_2861167_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931099.1|2861163_2861958_-	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_010931100.1|2861989_2862694_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931101.1|2862768_2863569_-	SURF1 family protein	NA	NA	NA	NA	NA
WP_003809276.1|2863565_2863973_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_003819722.1|2863969_2864611_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_010931102.1|2864603_2866604_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010931103.1|2867864_2869196_+	MFS transporter	NA	NA	NA	NA	NA
WP_005012067.1|2869192_2870143_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931105.1|2871849_2872116_-	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_003812839.1|2872823_2873162_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931107.1|2877715_2878318_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931108.1|2878414_2879704_+	MFS transporter	NA	NA	NA	NA	NA
WP_003812846.1|2879761_2880493_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931109.1|2880489_2881293_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812851.1|2881289_2882378_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|2882374_2883304_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812857.1|2883452_2884598_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930800.1|2884619_2885570_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154698391.1|2885587_2885746_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931110.1|2885900_2889722_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010931111.1|2889878_2890547_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_014905522.1|2890551_2892225_-	MCE family protein	NA	NA	NA	NA	NA
WP_003820402.1|2892243_2893563_-	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_010931114.1|2893567_2895883_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_010931115.1|2895938_2898107_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_010931116.1|2898103_2903293_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_003820400.1|2903382_2903697_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_003812875.1|2903924_2904170_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820399.1|2904264_2904783_+	DUF192 domain-containing protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_010931117.1|2904882_2906088_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_019247560.1|2906203_2907601_-	chloride channel protein	NA	NA	NA	NA	NA
WP_010931119.1|2907717_2908296_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_010931120.1|2908368_2909760_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_005012067.1|2909927_2910878_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812889.1|2911158_2911779_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_010931122.1|2911775_2912189_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_010931123.1|2912185_2913229_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_003812895.1|2913284_2913473_+	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931124.1|2913482_2914247_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_010931125.1|2914337_2914994_+	adenylate kinase	NA	NA	NA	NA	NA
WP_010931126.1|2915085_2915844_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931127.1|2915869_2917471_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931128.1|2917671_2918676_+	FecR domain-containing protein	NA	NA	NA	NA	NA
WP_003812908.1|2918776_2919040_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931129.1|2919157_2919934_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_005012067.1|2920524_2921475_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|2923858_2924971_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_010929584.1|2925027_2925978_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP010251	Bordetella pertussis strain I468 chromosome, complete genome	4106401	2956364	2995553	4106401	transposase	Planktothrix_phage(50.0%)	36	NA	NA
WP_005012067.1|2956364_2957315_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268686.1|2957332_2957482_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023852715.1|2957435_2958332_-	inositol monophosphatase	NA	NA	NA	NA	NA
WP_003814547.1|2960609_2962835_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_003814544.1|2962999_2964088_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_019247918.1|2964044_2964698_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931144.1|2964745_2965543_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930176.1|2966074_2967025_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247277.1|2967099_2968254_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|2968310_2969261_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814535.1|2969359_2969665_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003820797.1|2969693_2970128_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_010931147.1|2970129_2971374_-	aconitase X catalytic domain-containing protein	NA	NA	NA	NA	NA
WP_003820799.1|2971370_2972081_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_033446288.1|2972095_2973007_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931149.1|2973369_2973774_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247890.1|2973770_2974229_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_019247891.1|2974235_2975144_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010931150.1|2975140_2976007_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_003814524.1|2975993_2976821_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003820806.1|2976831_2977959_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_010931152.1|2980316_2981579_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010931153.1|2981585_2982338_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_019248355.1|2982389_2982575_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820813.1|2982850_2983315_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_003820814.1|2983346_2984006_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_010931154.1|2984150_2986259_+	AsmA family protein	NA	NA	NA	NA	NA
WP_023852714.1|2986255_2987206_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931155.1|2987309_2987930_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931156.1|2988021_2988774_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019248356.1|2989908_2991033_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247402.1|2991078_2991447_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2991688_2992639_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247492.1|2993674_2994217_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023998107.1|2994414_2994585_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|2994602_2995553_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP010251	Bordetella pertussis strain I468 chromosome, complete genome	4106401	3381049	3434790	4106401	transposase	Staphylococcus_phage(33.33%)	48	NA	NA
WP_077069052.1|3381049_3382000_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931336.1|3382404_3383049_-	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_019247677.1|3383073_3383658_-	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_014905506.1|3383758_3384376_-	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_010931337.1|3384378_3386094_-	urease subunit alpha	NA	NA	NA	NA	NA
WP_010931338.1|3386090_3386399_-	urease subunit beta	NA	NA	NA	NA	NA
WP_003814828.1|3386415_3387033_-	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_010931340.1|3387077_3387380_-	urease subunit gamma	NA	NA	NA	NA	NA
WP_003814832.1|3387480_3388335_-	urease accessory protein UreD	NA	NA	NA	NA	NA
WP_124740609.1|3388522_3388747_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929281.1|3388916_3389189_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010929282.1|3389606_3390014_-	GFA family protein	NA	NA	NA	NA	NA
WP_010931341.1|3390383_3391178_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010927102.1|3391278_3392514_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003814852.1|3392582_3393599_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931342.1|3393610_3394987_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814856.1|3394983_3396180_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814858.1|3396176_3397715_-	SpoVR family protein	NA	NA	NA	NA	NA
WP_010931343.1|3397711_3398971_-	YeaH/YhbH family protein	NA	NA	NA	NA	NA
WP_005012067.1|3400911_3401862_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931344.1|3402628_3403723_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247312.1|3403715_3405050_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_003808193.1|3405003_3405687_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003808195.1|3405712_3406876_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_004566224.1|3406872_3407874_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931346.1|3407873_3408746_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931347.1|3408742_3409492_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931348.1|3409488_3410280_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931349.1|3410276_3411416_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_047122778.1|3411691_3412477_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486103.1|3412510_3413293_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010931351.1|3413296_3413686_+	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_010931352.1|3414825_3415689_+	MaoC family dehydratase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931353.1|3415724_3416813_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|3416809_3417760_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247959.1|3418113_3421092_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003818344.1|3422018_3422897_+	fatty acid desaturase	NA	NA	NA	NA	NA
WP_005013747.1|3424845_3425796_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931354.1|3425792_3426260_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_010931355.1|3426302_3427073_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010927090.1|3427093_3427894_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931356.1|3427904_3429314_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_003814739.1|3429408_3430194_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931561.1|3430433_3431450_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814742.1|3431557_3431950_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931357.1|3432087_3432768_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_023994844.1|3432772_3433744_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930179.1|3433839_3434790_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 27
NZ_CP010251	Bordetella pertussis strain I468 chromosome, complete genome	4106401	3440945	3500246	4106401	transposase,tRNA	Acinetobacter_phage(27.27%)	48	NA	NA
WP_003820957.1|3440945_3442709_+|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931362.1|3442820_3443699_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003814250.1|3443811_3444627_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_003814252.1|3444630_3444882_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_010929632.1|3444966_3445983_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814254.1|3446313_3446535_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_019247693.1|3448895_3449813_-	DMT family transporter	NA	NA	NA	NA	NA
WP_019247692.1|3450310_3451519_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931365.1|3451598_3453170_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814275.1|3453287_3454223_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_003814277.1|3454411_3455356_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814283.1|3455923_3461641_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_010931367.1|3461646_3462774_+	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814287.1|3462829_3463456_+	aminotransferase class IV	NA	NA	NA	NA	NA
WP_010931363.1|3463727_3464744_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010927020.1|3464839_3465550_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931368.1|3465546_3466536_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931369.1|3466631_3468263_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931370.1|3468265_3469003_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247745.1|3469158_3470031_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_003814298.1|3470299_3471520_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814300.1|3471516_3472176_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814302.1|3472247_3472880_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010931372.1|3472909_3473428_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_010931373.1|3473438_3474548_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814312.1|3474594_3475449_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931374.1|3475450_3476353_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929969.1|3477575_3478526_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997720.1|3480283_3481273_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247413.1|3481269_3481428_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931375.1|3481448_3482237_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_003817833.1|3482233_3483265_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_003815390.1|3483283_3483847_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_010931376.1|3483902_3485423_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_010931377.1|3485686_3486391_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_003815384.1|3486398_3487136_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_003815381.1|3487241_3487616_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815379.1|3487658_3488948_+	murein transglycosylase A	NA	NA	NA	NA	NA
WP_010931378.1|3488944_3490114_+	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_010931379.1|3490110_3490950_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931380.1|3491009_3491945_+	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_005012067.1|3491957_3492908_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931381.1|3493006_3493969_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_003817821.1|3494000_3494360_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931382.1|3494484_3495387_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_010931383.1|3495388_3497161_-	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_003815367.1|3497195_3497972_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_023852617.1|3499295_3500246_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP010251	Bordetella pertussis strain I468 chromosome, complete genome	4106401	3515184	3573257	4106401	transposase,tRNA	Planktothrix_phage(12.5%)	47	NA	NA
WP_005012808.1|3515184_3516135_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931392.1|3516263_3517397_-	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931393.1|3517440_3518346_-	hydrolase	NA	NA	NA	NA	NA
WP_023852622.1|3518348_3520049_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
WP_010931394.1|3520045_3520966_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003817805.1|3520973_3521951_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931395.1|3522009_3523044_-	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_003815317.1|3525018_3525255_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931396.1|3525381_3526245_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_003815315.1|3526333_3527155_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003815313.1|3527234_3527972_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931397.1|3527968_3528961_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_003817794.1|3529074_3529737_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931399.1|3529781_3530930_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010931400.1|3533253_3534204_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486105.1|3534544_3535495_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3535593_3536544_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443756.1|3536840_3537338_+	cupredoxin family protein	NA	NA	NA	NA	NA
WP_010931403.1|3537380_3539156_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_010931404.1|3539163_3540030_+	copper resistance protein B	NA	NA	NA	NA	NA
WP_019249391.1|3540036_3540771_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931406.1|3541940_3542735_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815296.1|3543024_3543615_+	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931407.1|3543648_3544977_-	amidase	NA	NA	NA	NA	NA
WP_010931408.1|3545051_3546197_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014905478.1|3546308_3547307_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446233.1|3547269_3547704_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_010929974.1|3549220_3550105_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929973.1|3550101_3551307_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929972.1|3551303_3552164_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_003807038.1|3552276_3554067_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_003807035.1|3554107_3554773_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	6.7e-11
WP_010929971.1|3554773_3555082_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929970.1|3555247_3556534_-	putative Na+/H+ antiporter	NA	NA	NA	NA	NA
WP_010929969.1|3557967_3558918_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929968.1|3560869_3562084_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_003815171.1|3562189_3563179_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_003815172.1|3563175_3563784_+	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_010929967.1|3563796_3564426_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815175.1|3564422_3565043_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_003815177.1|3565074_3565866_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_010929966.1|3566717_3567173_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_010929965.1|3567191_3568118_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929964.1|3568171_3569458_-	cytochrome c	NA	NA	NA	NA	NA
WP_003815183.1|3570388_3571261_+	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929963.1|3571257_3572208_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_005012067.1|3572306_3573257_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
