The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	27282	71085	4106394	transposase,tRNA	Synechococcus_phage(50.0%)	41	NA	NA
WP_010930363.1|27282_28233_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_019247164.1|29141_30359_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|32214_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|34625_35576_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|37012_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41318_42212_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_010929588.1|43663_44614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|45200_45749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45720_45957_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46084_46978_+	AEC family transporter	NA	NA	NA	NA	NA
WP_010929590.1|49196_50444_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|50440_51055_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|51190_52141_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|52183_53440_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|54671_55406_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|55411_56002_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|56026_56716_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|56712_57474_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|57553_58453_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|58546_59497_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|60297_61524_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_047122776.1|61523_61937_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|62126_63068_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248755.1|63491_64466_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929599.1|64522_65104_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010929600.1|65116_65419_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|65537_66596_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|66630_67902_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|68531_69713_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|70134_71085_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	78683	137157	4106394	transposase,tRNA	Planktothrix_phage(22.22%)	54	NA	NA
WP_005012067.1|78683_79634_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|79708_80653_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929608.1|80649_82524_-	O-antigen biosynthesis protein WlbL	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
WP_003807102.1|83871_84576_-	O-antigen biosynthesis protein WlbI	NA	NA	NA	NA	NA
WP_010929609.1|84572_85745_-	O-antigen biosynthesis protein WlbH	NA	NA	NA	NA	NA
WP_010929610.1|85940_86534_-	O-antigen biosynthesis protein WlbG	NA	NA	NA	NA	NA
WP_010929611.1|86530_87763_-	O-antigen biosynthesis protein WlbF	NA	NA	NA	NA	NA
WP_010929612.1|87780_89040_-	O-antigen biosynthesis protein WlbE	NA	NA	NA	NA	NA
WP_010929613.1|89063_90152_-	O-antigen biosynthesis protein WlbD	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
WP_010929614.1|90159_91260_-	O-antigen biosynthesis protein WlbC	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
WP_003807114.1|91263_91839_-	O-antigen biosynthesis protein WlbB	NA	NA	NA	NA	NA
WP_003807115.1|91842_92895_-	O-antigen biosynthesis protein WlbA	NA	NA	NA	NA	NA
WP_010929615.1|93025_94033_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
WP_010929616.1|94034_95321_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_003807124.1|95337_95493_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929617.1|95517_96321_-	type III pantothenate kinase	NA	NA	NA	NA	NA
WP_010929618.1|96317_97184_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_010929619.1|97258_98389_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003807131.1|98388_99228_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
WP_010929620.1|100160_100763_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010929621.1|100792_101446_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003807138.1|101578_102835_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
WP_010929622.1|102882_103782_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_003818417.1|103857_104133_+	YbeD family protein	NA	NA	NA	NA	NA
WP_010929623.1|104140_104803_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_003807146.1|104864_105866_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_003807148.1|105880_106429_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
WP_010929624.1|106486_107383_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_010929625.1|107379_108441_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
WP_010929626.1|108476_109427_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|110326_111520_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|111601_112231_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|112292_112976_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|112985_114668_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|114955_115303_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|115393_115711_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|115993_117010_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|117085_117886_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|117882_118758_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|118768_120061_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|120103_121144_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|121249_122071_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|122171_123122_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905488.1|123220_124126_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
WP_003815918.1|124122_124956_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010929637.1|125792_126803_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_019247800.1|126799_127189_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929638.1|128082_129336_+	amidase	NA	NA	NA	NA	NA
WP_010929639.1|129426_131127_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_010929640.1|131553_132201_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853393.1|132199_133639_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_003815905.1|133731_134034_+	bacterioferritin-associated ferredoxin	NA	NA	NA	NA	NA
WP_010929512.1|134061_134940_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929591.1|136206_137157_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	165942	226453	4106394	transposase,protease,tRNA	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	51	NA	NA
WP_005015810.1|165942_166893_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|168336_169239_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|169216_169846_-	LemA family protein	NA	NA	NA	NA	NA
WP_010929660.1|170128_171559_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.8	5.8e-44
WP_010929661.1|171592_172222_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|172270_173878_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|173902_174586_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|174667_175144_-	bacterioferritin	NA	NA	NA	NA	NA
WP_005012067.1|175350_176301_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929664.1|177416_177944_+	META domain-containing protein	NA	NA	NA	NA	NA
WP_010929665.1|178035_178851_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_003808370.1|178911_179646_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010929666.1|179683_181762_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|182011_182284_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446322.1|182385_183471_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|183474_185379_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_014486044.1|185375_189050_+	translocation/assembly module TamB domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|189110_189674_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|189681_190104_-	VOC family protein	NA	NA	NA	NA	NA
WP_010929671.1|190131_190551_-	VOC family protein	NA	NA	NA	NA	NA
WP_076879599.1|190579_191053_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	31.1	2.2e-11
WP_003808391.1|191152_191650_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|191804_194075_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_010929672.1|194123_195356_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929591.1|195454_196405_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929673.1|196507_197143_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.8e-83
WP_019248671.1|197139_198033_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|198427_199528_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|199609_199984_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|200043_202908_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|203052_203793_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|203862_205074_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|205102_206071_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931070.1|206684_207635_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|207791_208115_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_023853200.1|208219_209260_-	cyclase family protein	NA	NA	NA	NA	NA
WP_010929697.1|209265_210045_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|210090_210387_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|210412_210688_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|210744_211389_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|211388_212075_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010929695.1|212204_213056_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|213106_213832_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|213863_215213_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|215324_216257_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033446404.1|216714_219510_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_010929690.1|220103_223046_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|223117_223837_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|223875_224424_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|224578_225478_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|225502_226453_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	234385	287973	4106394	transposase,protease,tRNA	Bacillus_phage(25.0%)	47	NA	NA
WP_005012067.1|234385_235336_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|235422_236373_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|236369_237320_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929700.1|237418_238216_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003814363.1|239165_239576_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_003814358.1|240597_241341_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814356.1|241384_242428_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814355.1|242598_244701_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814351.1|246111_247068_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929701.1|247086_247578_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_010929702.1|247574_248930_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929703.1|248930_249629_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929704.1|249625_250327_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_003814339.1|250579_251629_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_003814337.1|251734_252676_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|252672_254562_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814332.1|254648_255287_+	VTT domain-containing protein	NA	NA	NA	NA	NA
WP_019247543.1|255429_256815_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|256745_257282_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|257433_258825_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|258841_259822_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|259957_260941_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|261005_261905_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|262011_263766_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|263773_264898_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|264911_265892_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|266622_267573_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929712.1|268132_268678_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929713.1|268761_270381_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|270396_271551_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|271564_271690_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|271686_273438_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|273434_275114_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929716.1|275176_275725_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
WP_010929717.1|276867_277146_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|278189_279140_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929718.1|279417_279579_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_010929719.1|279586_279727_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815821.1|280245_280695_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_003815819.1|280704_281316_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_019247426.1|281474_282329_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|282348_283731_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|283795_284437_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|284576_285035_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|285059_285836_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|285889_287026_+	trypsin-like peptidase domain-containing protein	NA	W5SAB9	Pithovirus	31.2	1.2e-07
WP_005015810.1|287022_287973_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	469550	586396	4106394	transposase,tRNA	Acinetobacter_phage(22.22%)	101	NA	NA
WP_010929956.1|469550_470501_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929957.1|471223_472498_+|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_003807618.1|472584_473667_+	peptide chain release factor 1	NA	A0A0S4KWG0	Pseudomonas_phage	40.7	3.3e-07
WP_010929958.1|473677_474490_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_010929959.1|474526_474853_+	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA	NA
WP_003807624.1|474857_475418_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA	NA
WP_003819054.1|475658_476651_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929960.1|476669_477665_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_023853194.1|477680_479057_+	FAD binding domain-containing protein	NA	A0A0P0IVM8	Acinetobacter_phage	37.3	2.4e-18
WP_010929962.1|479049_481431_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_019247263.1|481447_481837_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_020699695.1|481963_482194_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|482298_483249_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929963.1|483347_484298_-	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_003815183.1|484294_485167_-	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929964.1|486097_487384_+	cytochrome c	NA	NA	NA	NA	NA
WP_010929965.1|487437_488364_-	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929966.1|488382_488838_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_003815177.1|489689_490481_-	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_003815175.1|490512_491133_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_010929967.1|491129_491759_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815172.1|491771_492380_-	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_003815171.1|492376_493366_-	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_010929968.1|493471_494686_+	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|496637_497588_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929970.1|499021_500308_+	putative Na+/H+ antiporter	NA	NA	NA	NA	NA
WP_010929971.1|500473_500782_+	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_003807035.1|500782_501448_+	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	6.7e-11
WP_003807038.1|501488_503279_+|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_010929972.1|503391_504252_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_010929973.1|504248_505454_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929974.1|505450_506335_-	DMT family transporter	NA	NA	NA	NA	NA
WP_033446233.1|507851_508286_-	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_014905478.1|508248_509247_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931408.1|509358_510504_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931407.1|510578_511907_+	amidase	NA	NA	NA	NA	NA
WP_003815296.1|511940_512531_-	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931406.1|512820_513615_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019249391.1|514784_515519_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931404.1|515525_516392_-	copper resistance protein B	NA	NA	NA	NA	NA
WP_010931403.1|516399_518175_-	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_029443756.1|518217_518715_-	cupredoxin family protein	NA	NA	NA	NA	NA
WP_005013747.1|519011_519962_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486105.1|520060_521011_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931400.1|521351_522302_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931399.1|524625_525774_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003817794.1|525818_526481_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931397.1|526594_527587_+	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_003815313.1|527583_528321_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003815315.1|528400_529222_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931396.1|529310_530174_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_003815317.1|530300_530537_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931395.1|532511_533546_+	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_003817805.1|533604_534582_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931394.1|534589_535510_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_023852622.1|535506_537207_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
WP_010931393.1|537209_538115_+	hydrolase	NA	NA	NA	NA	NA
WP_010931392.1|538158_539292_+	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_005012808.1|539420_540371_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931391.1|540469_542539_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	37.3	2.6e-101
WP_019247688.1|542581_544684_-	primosomal protein N'	NA	NA	NA	NA	NA
WP_010931389.1|544990_546067_-	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_010931388.1|546142_547027_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815341.1|547209_547632_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA	NA
WP_010931387.1|547641_549042_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
WP_003817813.1|549084_549990_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
WP_010931386.1|550088_551630_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
WP_003815348.1|551664_552204_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA	NA
WP_010931385.1|552216_552687_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
WP_003815363.1|552824_553067_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA	NA
WP_003815364.1|553183_554065_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
WP_003815365.1|554137_554458_-	ATP synthase subunit I	NA	NA	NA	NA	NA
WP_023852617.1|555309_556260_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815367.1|557583_558360_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931383.1|558394_560167_+	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931382.1|560168_561071_-	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_003817821.1|561195_561555_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931381.1|561586_562549_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_005012067.1|562647_563598_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931380.1|563610_564546_-	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_010931379.1|564605_565445_-	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931378.1|565441_566611_-	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_003815379.1|566607_567897_-	murein transglycosylase A	NA	NA	NA	NA	NA
WP_003815381.1|567939_568314_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815384.1|568419_569157_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_010931377.1|569164_569869_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_010931376.1|570132_571653_+	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_003815390.1|571708_572272_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_003817833.1|572290_573322_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_010931375.1|573318_574107_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_019247413.1|574127_574286_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023997720.1|574282_575272_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|577028_577979_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931374.1|579201_580104_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814312.1|580105_580960_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931373.1|581006_582116_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931372.1|582126_582645_-	flavin reductase family protein	NA	NA	NA	NA	NA
WP_003814302.1|582674_583307_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_003814300.1|583378_584038_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814298.1|584034_585255_-	MFS transporter	NA	NA	NA	NA	NA
WP_019247745.1|585523_586396_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
>prophage 6
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	590810	654643	4106394	transposase,tRNA	Pandoravirus(12.5%)	47	NA	NA
WP_010931363.1|590810_591827_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814287.1|592098_592725_-	aminotransferase class IV	NA	NA	NA	NA	NA
WP_010931367.1|592780_593908_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814283.1|593913_599631_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_003814277.1|600198_601143_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814275.1|601331_602267_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_010931365.1|602384_603956_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247692.1|604035_605244_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_019247693.1|605741_606659_+	DMT family transporter	NA	NA	NA	NA	NA
WP_003814254.1|609019_609241_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_010929632.1|609571_610588_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814252.1|610672_610924_-	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_003814250.1|610927_611743_-	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_010931362.1|611855_612734_-	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003820957.1|612845_614609_-|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931361.1|614724_616065_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010927010.1|617134_618559_-	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_003814239.1|618558_619260_-	response regulator	NA	W8CYM9	Bacillus_phage	36.6	5.6e-32
WP_010930179.1|620764_621715_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994844.1|621810_622782_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931357.1|622786_623467_-	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_003814742.1|623604_623997_+	OsmC family protein	NA	NA	NA	NA	NA
WP_010931561.1|624104_625121_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814739.1|625360_626146_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931356.1|626240_627650_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|627660_628461_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931355.1|628481_629252_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010931354.1|629294_629762_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_005013747.1|629758_630709_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818344.1|632657_633536_-	fatty acid desaturase	NA	NA	NA	NA	NA
WP_019247959.1|634462_637441_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931070.1|637794_638745_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931353.1|638741_639830_-	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931352.1|639865_640729_-	MaoC family dehydratase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931351.1|641868_642258_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_014486103.1|642261_643044_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_047122778.1|643077_643863_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931349.1|644138_645278_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931348.1|645274_646066_+	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931347.1|646062_646812_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931346.1|646808_647681_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_004566224.1|647680_648682_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003808195.1|648678_649842_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003808193.1|649867_650551_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247312.1|650504_651839_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931344.1|651831_652926_+	CoA transferase	NA	NA	NA	NA	NA
WP_005012067.1|653692_654643_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	673554	750863	4106394	transposase,protease,integrase,tRNA	Bacillus_phage(20.0%)	57	720691:720709	740579:740597
WP_023995489.1|673554_674505_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931335.1|674603_676079_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931334.1|677666_678554_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931333.1|678556_679498_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931332.1|679543_681109_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931331.1|682886_684212_-	aspartate aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931330.1|684394_685852_+	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	21.1	7.6e-15
WP_003816386.1|685815_686313_-	dihydrofolate reductase	NA	A0A140HLG8	Bacillus_phage	38.9	3.0e-24
WP_010931328.1|686343_687315_-	thymidylate synthase	NA	J7KKN7	Erwinia_phage	33.3	4.8e-50
WP_003808444.1|687367_687805_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931327.1|687928_688597_+	2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase	NA	NA	NA	NA	NA
WP_003808448.1|689325_690429_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_171024626.1|690531_691809_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	NA	NA	NA	NA	NA
WP_010930472.1|691820_692846_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	NA	A0A2K9L4U8	Tupanvirus	44.2	4.7e-72
WP_010931325.1|692847_694218_+	polysaccharide biosynthesis C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931324.1|694218_695355_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010931323.1|695401_697327_+	asparagine synthase (glutamine-hydrolyzing)	NA	A0A2K9R7N5	Dishui_lake_phycodnavirus	29.0	1.0e-27
WP_010931322.1|697323_698445_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010931321.1|698441_699596_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_010931320.1|699592_700723_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_003808462.1|700730_702296_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_010931319.1|702302_703685_-	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	31.6	6.2e-51
WP_003808465.1|703963_704575_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931317.1|704666_706082_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_003818936.1|706099_706810_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010931316.1|706806_708129_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_010931315.1|708208_710170_+	sulfatase-like hydrolase/transferase	NA	NA	NA	NA	NA
WP_003818932.1|710295_711609_-	fumarylacetoacetase	NA	NA	NA	NA	NA
WP_003818930.1|711717_713016_-	homogentisate 1,2-dioxygenase	NA	NA	NA	NA	NA
WP_010931314.1|713198_714107_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003808487.1|714116_714326_-	DUF2783 domain-containing protein	NA	NA	NA	NA	NA
WP_003808489.1|714337_716017_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931313.1|716118_717072_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010925978.1|717162_717990_-	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	NA	NA	NA	NA
WP_010931312.1|717988_719875_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_003818921.1|719871_720471_+	lipoprotein localization protein LolB	NA	NA	NA	NA	NA
WP_010931311.1|720519_721419_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
720691:720709	attL	CTGCCTGGCGTGGCCGAGT	NA	NA	NA	NA
WP_010931310.1|721627_722578_+	ribose-phosphate pyrophosphokinase	NA	A0A2K9L8D8	Tupanvirus	35.5	7.3e-43
WP_029443719.1|722700_723315_+	50S ribosomal protein L25/general stress protein Ctc	NA	NA	NA	NA	NA
WP_010931308.1|723443_724040_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931307.1|724036_724819_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_010931306.1|724891_725983_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_010931305.1|726262_727390_+|integrase	site-specific integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	33.6	1.4e-48
WP_010931304.1|727731_728778_+	Fic family protein	NA	NA	NA	NA	NA
WP_010931303.1|728925_732045_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA	NA
WP_010931302.1|732046_734998_+	restriction endonuclease subunit M	NA	G8I4P9	Mycobacterium_phage	25.1	2.9e-21
WP_010931301.1|735013_736225_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_005013747.1|736408_737359_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077274087.1|737375_737870_+	DUF4276 family protein	NA	NA	NA	NA	NA
WP_019247740.1|737873_738131_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248455.1|738674_739586_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_029443992.1|739667_739952_+	ATP-dependent helicase	NA	A0A1V0SIN4	Klosneuvirus	34.1	6.8e-05
WP_005012067.1|740735_741686_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
740579:740597	attR	ACTCGGCCACGCCAGGCAG	NA	NA	NA	NA
WP_019247178.1|742104_744669_-	autotransporter domain-containing protein	NA	NA	NA	NA	NA
WP_019247179.1|744713_746567_-	autotransporter-associated beta strand repeat-containing protein	NA	NA	NA	NA	NA
WP_014905963.1|746899_748471_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|749912_750863_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	868033	931868	4106394	transposase,protease,tRNA	Pseudomonas_phage(30.0%)	56	NA	NA
WP_005012067.1|868033_868984_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931247.1|869082_869946_-	shikimate dehydrogenase	NA	NA	NA	NA	NA
WP_010931246.1|869942_870842_-	TonB family protein	NA	NA	NA	NA	NA
WP_014486102.1|870879_872763_-	RNB domain-containing ribonuclease	NA	NA	NA	NA	NA
WP_010931244.1|872834_873428_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003814955.1|873438_874809_-	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	NA	NA	NA	NA	NA
WP_023853327.1|874891_875440_+	TlpA family protein disulfide reductase	NA	NA	NA	NA	NA
WP_003814953.1|875518_875953_+	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA	NA
WP_003814952.1|876042_876492_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_003814951.1|876501_877848_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_010931242.1|878813_879911_+	DUF3426 domain-containing protein	NA	NA	NA	NA	NA
WP_010931241.1|879922_880864_+	carbohydrate kinase family protein	NA	NA	NA	NA	NA
WP_010931240.1|881036_881540_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_003814943.1|881820_882060_+	acyl carrier protein	NA	NA	NA	NA	NA
WP_003814941.1|882085_883213_+	D-alanyl-lipoteichoic acid biosynthesis protein DltD	NA	NA	NA	NA	NA
WP_010931239.1|883342_884470_+	membrane-bound O-acyltransferase	NA	A0A125RNP0	Pseudomonas_phage	30.8	3.7e-25
WP_010931238.1|884480_885944_+	D-alanine--poly(phosphoribitol) ligase	NA	A0A2K9L3I8	Tupanvirus	25.1	7.3e-26
WP_010931237.1|885951_886527_-	YggT family protein	NA	NA	NA	NA	NA
WP_010931236.1|886665_887193_-	histone H1-like DNA-binding protein	NA	NA	NA	NA	NA
WP_003814929.1|887510_888707_-	ribonucleotide-diphosphate reductase subunit beta	NA	A0A2H4P762	Pseudomonas_phage	28.9	1.0e-33
WP_010931235.1|888728_891656_-	ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4P767	Pseudomonas_phage	43.9	3.4e-171
WP_019247415.1|891961_895024_-	indolepyruvate ferredoxin oxidoreductase family protein	NA	NA	NA	NA	NA
WP_192855352.1|895046_895613_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814925.1|895585_896038_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_023998238.1|896239_896749_+	lipoprotein	NA	NA	NA	NA	NA
WP_010931233.1|896817_898005_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814917.1|898008_899454_-|tRNA	glutamate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010931231.1|899550_902010_+	bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|902006_902957_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931230.1|903055_903730_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931229.1|904026_905523_+	membrane protein	NA	NA	NA	NA	NA
WP_003820592.1|905639_907028_+	ATP-dependent RNA helicase DbpA	NA	A0A0N9Q9J4	Chrysochromulina_ericina_virus	33.5	4.6e-54
WP_003820593.1|907133_907523_+	VOC family protein	NA	NA	NA	NA	NA
WP_003820594.1|907534_908227_-	cysteine hydrolase	NA	NA	NA	NA	NA
WP_010931228.1|908241_909078_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931227.1|909080_909890_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	37.9	2.6e-33
WP_010931226.1|911146_911821_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_023853313.1|911834_912386_-	ribosome-associated protein	NA	NA	NA	NA	NA
WP_004567741.1|912444_913809_+|protease	metalloprotease PmbA	protease	NA	NA	NA	NA
WP_004567739.1|914150_915248_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010927106.1|915543_915972_+	50S ribosomal protein L13	NA	NA	NA	NA	NA
WP_010931224.1|915981_916374_+	30S ribosomal protein S9	NA	NA	NA	NA	NA
WP_003820599.1|916562_917627_+	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA	NA
WP_010931223.1|917663_918410_+	membrane protein	NA	NA	NA	NA	NA
WP_003814883.1|918497_918869_+	iron-sulfur cluster insertion protein ErpA	NA	A0A2H4N7M3	Lake_Baikal_phage	56.9	4.7e-30
WP_010931222.1|918938_920075_-	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA	NA
WP_010931221.1|920080_921496_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A8ATH6	Listeria_phage	46.9	1.9e-18
WP_005012067.1|921587_922538_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|922636_923587_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814877.1|923854_925084_+|tRNA	tyrosine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003820605.1|925119_925776_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA	NA
WP_003814873.1|925996_927244_+	serine hydroxymethyltransferase	NA	A0A219YCZ0	Aeromonas_phage	52.7	1.1e-99
WP_003814871.1|927401_927884_+	transcriptional repressor NrdR	NA	NA	NA	NA	NA
WP_023853315.1|928878_929442_-	isochorismatase family protein	NA	NA	NA	NA	NA
WP_047122802.1|929647_930772_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	33.3	3.8e-38
WP_005015810.1|930917_931868_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	996798	1056451	4106394	transposase,tRNA	Bacillus_virus(25.0%)	57	NA	NA
WP_003813026.1|996798_997914_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_003813022.1|998014_998833_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_010931185.1|998930_999542_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_010931184.1|999701_1001078_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	47.5	2.2e-109
WP_003813017.1|1001140_1001599_+	cytochrome c	NA	NA	NA	NA	NA
WP_003813013.1|1001683_1002379_-	cytochrome b/b6 domain-containing protein	NA	NA	NA	NA	NA
WP_003813010.1|1002440_1002722_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931182.1|1003284_1004037_+	DUF3053 domain-containing protein	NA	NA	NA	NA	NA
WP_003813006.1|1004081_1005158_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_005012067.1|1005154_1006105_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486100.1|1006207_1006870_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019249309.1|1006964_1007135_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247599.1|1007487_1008489_+	amidase	NA	NA	NA	NA	NA
WP_003818702.1|1008491_1009688_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486098.1|1009708_1010512_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_019247598.1|1010592_1010889_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247597.1|1010919_1011483_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014486097.1|1011523_1012381_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003818698.1|1012388_1013138_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	6.2e-29
WP_014486096.1|1013159_1014032_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_014486095.1|1014060_1014840_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486094.1|1014873_1015671_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003808978.1|1018325_1018718_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486091.1|1018711_1019572_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003818691.1|1019575_1020538_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_014486089.1|1021314_1022004_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.8	4.8e-12
WP_010930208.1|1022864_1023815_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931181.1|1024164_1025034_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010926062.1|1025104_1025800_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010931179.1|1025789_1026299_+	nucleoside deaminase	NA	NA	NA	NA	NA
WP_010931178.1|1026295_1027516_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931177.1|1027463_1028366_-	transcriptional regulator GcvA	NA	NA	NA	NA	NA
WP_023997744.1|1029252_1030539_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931176.1|1030577_1031951_+	amidase	NA	NA	NA	NA	NA
WP_010931175.1|1031989_1032691_-	riboflavin synthase	NA	NA	NA	NA	NA
WP_010931174.1|1032989_1033979_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003809010.1|1034079_1034541_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931173.1|1034556_1035105_-	cysteine dioxygenase family protein	NA	NA	NA	NA	NA
WP_010931172.1|1035246_1036722_-	acyl--CoA ligase	NA	Q75ZG1	Hepacivirus	25.6	3.0e-35
WP_010931171.1|1036827_1037919_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010931170.1|1037922_1038705_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931169.1|1038714_1039503_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.0	1.1e-33
WP_010931168.1|1040628_1041063_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010931167.1|1041059_1042070_-	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_003809025.1|1042113_1043040_-	VOC family protein	NA	NA	NA	NA	NA
WP_003809026.1|1043326_1043695_+	DUF861 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|1043911_1044862_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853143.1|1044960_1045911_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931165.1|1045955_1048382_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.8	1.2e-86
WP_010931164.1|1048430_1049123_+	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	29.9	4.7e-07
WP_010931163.1|1049195_1050395_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_003819549.1|1050412_1051318_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931162.1|1051433_1052363_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010931161.1|1052388_1053735_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931160.1|1053762_1054512_+	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	26.4	1.2e-11
WP_010931159.1|1054525_1055308_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|1055500_1056451_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	1060002	1100240	4106394	transposase	Bacillus_virus(50.0%)	34	NA	NA
WP_005012067.1|1060002_1060953_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247492.1|1061338_1061881_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1062916_1063867_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247402.1|1064108_1064477_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248356.1|1064522_1065647_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931156.1|1066781_1067534_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931155.1|1067625_1068246_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852714.1|1068349_1069300_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931154.1|1069296_1071405_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003820814.1|1071549_1072209_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_003820813.1|1072240_1072705_-	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_019248355.1|1072980_1073166_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931153.1|1073217_1073970_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931152.1|1073976_1075239_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_023852748.1|1075280_1076519_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820806.1|1077596_1078724_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_003814524.1|1078734_1079562_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_010931150.1|1079548_1080415_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010931149.1|1081781_1082186_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|1082277_1083228_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446288.1|1083597_1084509_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003820799.1|1084523_1085234_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931147.1|1085230_1086475_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820797.1|1086476_1086911_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_003814535.1|1086939_1087245_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_005012067.1|1087343_1088294_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247277.1|1088350_1089505_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_010930176.1|1089579_1090530_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931144.1|1091061_1091859_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247918.1|1091906_1092560_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003814544.1|1092516_1093605_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_003814547.1|1093769_1095995_-	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_023852715.1|1098272_1099169_+	inositol monophosphatase	NA	NA	NA	NA	NA
WP_005012067.1|1099289_1100240_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	1130626	1201598	4106394	transposase,protease	uncultured_Mediterranean_phage(25.0%)	52	NA	NA
WP_005012808.1|1130626_1131577_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|1131633_1132746_+	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|1135129_1136080_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931129.1|1136670_1137447_+	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_003812908.1|1137564_1137828_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931128.1|1137928_1138933_-	FecR domain-containing protein	NA	NA	NA	NA	NA
WP_010931127.1|1139133_1140735_-	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931126.1|1140760_1141519_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931125.1|1141610_1142267_-	adenylate kinase	NA	NA	NA	NA	NA
WP_010931124.1|1142357_1143122_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003812895.1|1143131_1143320_-	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931123.1|1143375_1144419_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_010931122.1|1144415_1144829_-	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_003812889.1|1144825_1145446_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_005012067.1|1145726_1146677_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931120.1|1146844_1148236_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_010931119.1|1148308_1148887_+	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_019247560.1|1149003_1150401_+	chloride channel protein	NA	NA	NA	NA	NA
WP_010931117.1|1150516_1151722_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_003820399.1|1151821_1152340_-	DUF192 domain-containing protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_003812875.1|1152434_1152680_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820400.1|1152907_1153222_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_010931116.1|1153311_1158501_+	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_010931115.1|1158497_1160666_+	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_010931114.1|1160721_1163037_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_003820402.1|1163041_1164361_+	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_014905522.1|1164379_1166053_+	MCE family protein	NA	NA	NA	NA	NA
WP_010931111.1|1166057_1166726_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010931110.1|1166882_1170704_+	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930800.1|1171034_1171985_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812857.1|1172006_1173152_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|1173300_1174230_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812851.1|1174226_1175315_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_010931109.1|1175311_1176115_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812846.1|1176111_1176843_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931108.1|1176900_1178190_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931107.1|1178286_1178889_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812839.1|1183443_1183782_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931105.1|1184489_1184756_+	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_005012067.1|1186462_1187413_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931103.1|1187409_1188741_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931102.1|1190001_1192002_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_003819722.1|1191994_1192636_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_003809276.1|1192632_1193040_+	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_010931101.1|1193036_1193837_+	SURF1 family protein	NA	NA	NA	NA	NA
WP_010931100.1|1193911_1194616_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931099.1|1194647_1195442_+	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_010931070.1|1195438_1196389_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1196487_1197438_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812014.1|1197536_1197971_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_010931098.1|1198053_1200390_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
WP_010930525.1|1200581_1201598_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	1248992	1329867	4106394	transposase,tRNA	Bacillus_virus(25.0%)	58	NA	NA
WP_010927663.1|1248992_1249943_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931070.1|1249939_1250890_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931069.1|1251150_1252179_-	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010931068.1|1252258_1253557_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_003816847.1|1253553_1254135_-	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931067.1|1254447_1258494_+	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_010931066.1|1258734_1266396_+	hemagglutinin repeat-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_005012067.1|1266392_1267343_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931065.1|1268482_1268956_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931064.1|1269095_1269716_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931063.1|1269851_1270652_+	aldolase	NA	NA	NA	NA	NA
WP_003810897.1|1270706_1271798_+	TRAP transporter substrate-binding protein DctP	NA	NA	NA	NA	NA
WP_010931062.1|1271819_1272263_-	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_010931061.1|1272291_1272924_-	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
WP_003810909.1|1273034_1273451_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931060.1|1273443_1274136_+	DUF2238 domain-containing protein	NA	NA	NA	NA	NA
WP_010931059.1|1274242_1274617_+	MAPEG family protein	NA	NA	NA	NA	NA
WP_010931058.1|1274693_1275503_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931057.1|1275598_1276543_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
WP_003816577.1|1276581_1277553_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003810921.1|1277643_1278081_-	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA	NA
WP_029443733.1|1278139_1279021_-	NRDE family protein	NA	NA	NA	NA	NA
WP_010931054.1|1280024_1280885_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931053.1|1280917_1282300_+	FAD-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	28.4	7.9e-30
WP_010931052.1|1282296_1283316_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247407.1|1283688_1284183_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931051.1|1284190_1284931_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931050.1|1285011_1286616_-	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_010931049.1|1286655_1287444_-	DeoR family transcriptional regulator	NA	A0A077SK06	Escherichia_phage	30.4	2.0e-22
WP_010931048.1|1288646_1289735_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.1	9.7e-15
WP_010931047.1|1290615_1291428_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_004568502.1|1291440_1291749_+	DUF2160 domain-containing protein	NA	NA	NA	NA	NA
WP_010931046.1|1291866_1293597_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019249399.1|1293598_1294744_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931044.1|1294873_1295542_-	DUF502 domain-containing protein	NA	NA	NA	NA	NA
WP_003810957.1|1295663_1296131_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_019247521.1|1296266_1297649_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_014486086.1|1297645_1298770_+	DNA repair exonuclease	NA	NA	NA	NA	NA
WP_010931042.1|1298766_1301403_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010931070.1|1301818_1302769_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931041.1|1306515_1307127_-	DUF2239 family protein	NA	NA	NA	NA	NA
WP_003812368.1|1307349_1308810_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.3	1.6e-97
WP_010931040.1|1308906_1310499_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	33.3	1.0e-17
WP_019247974.1|1310852_1311110_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003816876.1|1311111_1312452_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010931038.1|1312547_1313237_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247976.1|1313249_1314680_+	MFS transporter	NA	NA	NA	NA	NA
WP_014905903.1|1316404_1317226_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931036.1|1317236_1318808_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931035.1|1318836_1319814_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931034.1|1319840_1320644_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.2	2.7e-30
WP_010931033.1|1320640_1321435_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003816890.1|1321442_1322678_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_010931032.1|1322670_1323105_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|1323854_1324805_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931031.1|1325426_1327154_-	sulfate permease	NA	NA	NA	NA	NA
WP_010931030.1|1327265_1328624_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_005013747.1|1328916_1329867_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	1350738	1414917	4106394	transposase	Vibrio_phage(25.0%)	55	NA	NA
WP_010929591.1|1350738_1351689_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931011.1|1351685_1352720_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_003816758.1|1352828_1353467_+	DedA family protein	NA	NA	NA	NA	NA
WP_019247724.1|1353761_1353989_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003820420.1|1354111_1354825_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_005013747.1|1355069_1356020_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930287.1|1356373_1356955_-	queuosine precursor transporter	NA	A0A2I7SAW6	Vibrio_phage	37.3	9.4e-17
WP_003811267.1|1356951_1357785_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
WP_010930288.1|1357995_1359309_+	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA	NA
WP_003811262.1|1359485_1360367_+	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA	NA
WP_003811259.1|1360386_1361238_+	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA	NA
WP_010930289.1|1361290_1362379_+	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	31.2	2.2e-19
WP_010930290.1|1362489_1363617_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003811244.1|1363851_1364463_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010929584.1|1364561_1365512_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811293.1|1365733_1366111_-	DUF423 domain-containing protein	NA	NA	NA	NA	NA
WP_003811295.1|1366258_1366756_+	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_010930291.1|1366752_1367280_+	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_003811298.1|1367413_1368229_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930292.1|1368241_1369423_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_003811301.1|1369470_1370364_-	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
WP_010930293.1|1370490_1370961_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930294.1|1371086_1371914_-	DUF3298 domain-containing protein	NA	NA	NA	NA	NA
WP_003811306.1|1371942_1372719_-	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
WP_023852802.1|1372715_1372991_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930295.1|1373005_1373470_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930296.1|1373481_1374183_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_003811310.1|1374292_1374793_-	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	38.4	4.7e-25
WP_010930297.1|1374875_1376054_-	DUF1501 domain-containing protein	NA	NA	NA	NA	NA
WP_003811313.1|1377681_1378017_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_010930298.1|1378204_1379653_+	CoA transferase	NA	NA	NA	NA	NA
WP_023852799.1|1379710_1380055_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	58.4	3.0e-31
WP_003811316.1|1380161_1380701_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_005012067.1|1380793_1381744_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852768.1|1381842_1382250_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247530.1|1382482_1382914_-	YXWGXW repeat-containing protein	NA	NA	NA	NA	NA
WP_010930300.1|1383095_1383500_-	DoxX family protein	NA	NA	NA	NA	NA
WP_010930301.1|1384736_1385060_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247533.1|1385062_1385950_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003811322.1|1385982_1386408_-	universal stress protein	NA	NA	NA	NA	NA
WP_019247534.1|1386479_1386833_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811324.1|1387072_1387579_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930302.1|1387617_1388949_-	transcriptional regulator PtsJ	NA	NA	NA	NA	NA
WP_003811326.1|1389008_1389824_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010930303.1|1389820_1390675_+	pyridoxine/pyridoxal/pyridoxamine kinase	NA	NA	NA	NA	NA
WP_010930304.1|1393737_1396281_-	malto-oligosyltrehalose synthase	NA	NA	NA	NA	NA
WP_010930305.1|1397647_1399402_-	malto-oligosyltrehalose trehalohydrolase	NA	NA	NA	NA	NA
WP_010930306.1|1399398_1401519_-	glycogen debranching protein GlgX	NA	NA	NA	NA	NA
WP_010930307.1|1401523_1403719_-	1,4-alpha-glucan branching protein GlgB	NA	NA	NA	NA	NA
WP_010930308.1|1403715_1407057_-	maltose alpha-D-glucosyltransferase	NA	NA	NA	NA	NA
WP_010930208.1|1409859_1410810_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811361.1|1410875_1411055_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247449.1|1411171_1411927_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010930310.1|1411913_1413059_-	DUF3182 family protein	NA	NA	NA	NA	NA
WP_010930208.1|1413966_1414917_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	1475408	1530895	4106394	transposase,protease	Mollivirus(16.67%)	56	NA	NA
WP_005012067.1|1475408_1476359_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811846.1|1477560_1478007_-	flagellar export protein FliJ	NA	NA	NA	NA	NA
WP_019247562.1|1477999_1479475_-	flagellar protein export ATPase FliI	NA	NA	NA	NA	NA
WP_010930338.1|1479471_1480227_-	flagellar assembly protein FliH	NA	NA	NA	NA	NA
WP_003817203.1|1480219_1481230_-	flagellar motor switch protein FliG	NA	NA	NA	NA	NA
WP_010930339.1|1481219_1482896_-	flagellar M-ring protein FliF	NA	NA	NA	NA	NA
WP_010930340.1|1483208_1483541_+	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA	NA
WP_010930341.1|1483554_1483950_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930342.1|1483959_1484286_-	EscU/YscU/HrcU family type III secretion system export apparatus switch protein	NA	NA	NA	NA	NA
WP_019247563.1|1484282_1484609_-	flagellar hook-length control protein FliK	NA	NA	NA	NA	NA
WP_023997203.1|1484535_1484949_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930343.1|1485553_1485904_-	flagellar protein FliT	NA	NA	NA	NA	NA
WP_010930344.1|1485951_1486380_-	flagellar export chaperone FliS	NA	NA	NA	NA	NA
WP_010930345.1|1486387_1487761_-	flagellar filament capping protein FliD	NA	NA	NA	NA	NA
WP_003817216.1|1487901_1488279_-	flagellar protein FlaG	NA	NA	NA	NA	NA
WP_010930346.1|1488541_1489849_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_023852965.1|1489909_1490740_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_003811815.1|1490736_1491225_+	CvpA family protein	NA	NA	NA	NA	NA
WP_003811814.1|1491266_1492787_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	43.7	4.8e-97
WP_003811812.1|1492830_1493307_-	disulfide bond formation protein B	NA	NA	NA	NA	NA
WP_010930348.1|1494110_1496708_-	[protein-PII] uridylyltransferase	NA	NA	NA	NA	NA
WP_003811806.1|1496737_1497559_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_003811803.1|1498285_1499035_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_010926570.1|1499218_1500097_+	elongation factor Ts	NA	NA	NA	NA	NA
WP_010930349.1|1500194_1500911_+	UMP kinase	NA	NA	NA	NA	NA
WP_003811796.1|1500925_1501486_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_010930350.1|1501652_1502417_+	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	36.1	1.7e-18
WP_010930351.1|1502436_1503294_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003811788.1|1503290_1504490_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_010930352.1|1504529_1505864_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_010930353.1|1505916_1508253_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_003811782.1|1508378_1508942_+	OmpH family outer membrane protein	NA	NA	NA	NA	NA
WP_010930354.1|1508950_1510042_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_003811776.1|1510113_1510569_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_010930355.1|1510569_1511364_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_010930356.1|1511360_1512542_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_003811770.1|1512528_1513134_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	40.2	8.8e-26
WP_003811768.1|1513130_1513904_+	RNA methyltransferase	NA	NA	NA	NA	NA
WP_010930357.1|1513915_1514743_-	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_010930358.1|1514904_1517268_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	35.9	2.2e-165
WP_010930359.1|1517335_1518055_-	glutamine amidotransferase	NA	NA	NA	NA	NA
WP_003811761.1|1518178_1518604_+	NfeD family protein	NA	NA	NA	NA	NA
WP_005012067.1|1518638_1519589_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811759.1|1519706_1520633_+	paraslipin	NA	NA	NA	NA	NA
WP_010930360.1|1520698_1521856_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811754.1|1521836_1522304_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_010930800.1|1522451_1523402_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811752.1|1523418_1523853_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_003811750.1|1523842_1524193_+	RnfH family protein	NA	NA	NA	NA	NA
WP_003811748.1|1524389_1525544_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003811746.1|1525540_1526713_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811743.1|1526760_1527654_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811741.1|1527699_1528137_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010930362.1|1528196_1528886_+	VIT family protein	NA	NA	NA	NA	NA
WP_010930363.1|1528895_1529846_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879624.1|1529944_1530895_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	1625592	1693678	4106394	transposase,tRNA	Streptococcus_virus(11.11%)	59	NA	NA
WP_010930416.1|1625592_1626081_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_019248504.1|1626198_1626777_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010930418.1|1626882_1627251_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|1627349_1628300_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994932.1|1628306_1629419_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_010930419.1|1630105_1631308_+	MFS transporter	NA	NA	NA	NA	NA
WP_004568212.1|1631343_1631490_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930420.1|1631511_1634172_+	PD-(D/E)XK nuclease family protein	NA	NA	NA	NA	NA
WP_010930421.1|1634184_1637589_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_023995689.1|1638256_1640482_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
WP_010930423.1|1640528_1640855_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_010930424.1|1640905_1641514_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_005013747.1|1641612_1642563_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930425.1|1642632_1643397_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930426.1|1643393_1643993_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930427.1|1644096_1644948_-	neutral zinc metallopeptidase	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
WP_010928449.1|1645007_1645634_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_005012067.1|1645630_1646581_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019249265.1|1646679_1647792_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_019248041.1|1647781_1648783_-	imelysin family protein	NA	NA	NA	NA	NA
WP_019247498.1|1648888_1650400_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_023853587.1|1650396_1651701_-	imelysin	NA	NA	NA	NA	NA
WP_010930431.1|1651812_1652373_-	membrane protein	NA	NA	NA	NA	NA
WP_010930432.1|1652640_1653195_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
WP_010930433.1|1653650_1653866_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_033446228.1|1654120_1656718_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
WP_010930435.1|1656714_1657902_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_019248658.1|1658560_1659175_+	fimbrial protein	NA	NA	NA	NA	NA
WP_010930437.1|1659263_1660391_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_033446216.1|1660402_1661308_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_005012067.1|1662200_1663151_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930439.1|1663332_1664085_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_003811112.1|1664153_1664813_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_003811113.1|1664809_1665538_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
WP_010930440.1|1665550_1667830_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
WP_010930441.1|1667854_1668058_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_010930442.1|1668099_1668732_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	2.4e-13
WP_010930443.1|1668867_1669785_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_010930444.1|1669781_1670495_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_003811135.1|1670732_1671503_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003811137.1|1671507_1672107_-	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
WP_003811138.1|1672351_1673842_+	AMP nucleosidase	NA	NA	NA	NA	NA
WP_010926696.1|1673900_1674185_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930445.1|1674322_1674478_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811148.1|1674750_1675677_-	YicC family protein	NA	NA	NA	NA	NA
WP_003811149.1|1675813_1676554_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_010930446.1|1676720_1678097_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003811152.1|1678278_1679184_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930448.1|1680835_1682638_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010930449.1|1682764_1683406_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_005012808.1|1683504_1684455_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930450.1|1684476_1685697_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_003811164.1|1685882_1687295_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_003811167.1|1687358_1688426_+	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_010930451.1|1688425_1689913_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_010930452.1|1689922_1690867_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811176.1|1691026_1691725_+	pirin family protein	NA	NA	NA	NA	NA
WP_010930453.1|1691802_1692708_+	pirin family protein	NA	NA	NA	NA	NA
WP_005012067.1|1692727_1693678_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	1729626	1785217	4106394	transposase	Brazilian_cedratvirus(25.0%)	47	NA	NA
WP_005013747.1|1729626_1730577_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930486.1|1730635_1731409_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486074.1|1731401_1732958_+	LTA synthase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1732954_1733905_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810741.1|1735231_1735834_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810743.1|1736073_1736775_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003816696.1|1736768_1737551_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_005012808.1|1737735_1738686_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930483.1|1738784_1739522_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010926609.1|1739711_1740470_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930482.1|1740516_1741506_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930481.1|1741683_1742652_-	transporter	NA	NA	NA	NA	NA
WP_010930480.1|1744191_1745160_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930479.1|1745168_1746110_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|1746583_1747594_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930477.1|1747584_1749099_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930476.1|1749095_1750442_+	BatD family protein	NA	NA	NA	NA	NA
WP_010930475.1|1750444_1751479_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_023852967.1|1751528_1753154_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_010929591.1|1753706_1754657_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930487.1|1754761_1755709_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247865.1|1755762_1757577_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010930489.1|1757569_1758244_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023995112.1|1758373_1761448_+	autotransporter SphB2	NA	NA	NA	NA	NA
WP_019247905.1|1761461_1761761_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930492.1|1762075_1762699_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_010930493.1|1762942_1763812_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010930494.1|1763789_1764734_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247909.1|1764819_1765746_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247910.1|1765858_1766638_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930497.1|1766628_1767825_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010930498.1|1767855_1768806_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_010930499.1|1769027_1769717_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930500.1|1769781_1770537_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930501.1|1770588_1771581_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930502.1|1771590_1772544_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811538.1|1772659_1773622_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249376.1|1775023_1775452_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1775448_1776399_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_170954298.1|1776692_1777430_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_010930504.1|1777853_1779041_-	MFS transporter	NA	NA	NA	NA	NA
WP_019249653.1|1779044_1779425_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930506.1|1781144_1782116_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930507.1|1782129_1782843_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930508.1|1782847_1783765_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811452.1|1783871_1784168_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929588.1|1784266_1785217_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	2017981	2087633	4106394	transposase,tRNA	Staphylococcus_phage(16.67%)	55	NA	NA
WP_003818515.1|2017981_2020639_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	39.0	3.3e-173
WP_010930709.1|2020716_2021919_-	MFS transporter	NA	NA	NA	NA	NA
WP_003810260.1|2021915_2022428_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247822.1|2022550_2022988_-	HU family DNA-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|2023264_2024215_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_062826579.1|2024313_2025264_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930710.1|2025517_2027323_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.2e-19
WP_010930711.1|2027436_2027604_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_003810297.1|2027667_2027904_-	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_010930712.1|2028272_2029472_-	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_010929591.1|2030987_2031938_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818523.1|2032389_2033391_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810306.1|2033563_2034421_+	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003810308.1|2034417_2035680_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003818524.1|2035780_2036155_+	tautomerase family protein	NA	NA	NA	NA	NA
WP_010930713.1|2036227_2037415_+	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_010930714.1|2037499_2038270_+	spermidine synthase	NA	NA	NA	NA	NA
WP_010930715.1|2038383_2039148_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930716.1|2039098_2040400_+	malonyl-CoA decarboxylase family protein	NA	NA	NA	NA	NA
WP_010930717.1|2040396_2041203_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003818532.1|2042947_2043919_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818533.1|2044075_2044588_+	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_010930718.1|2044746_2045721_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930719.1|2046721_2047516_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_003818535.1|2047541_2048348_-	TOBE domain-containing protein	NA	NA	NA	NA	NA
WP_003810329.1|2048458_2049049_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|2049059_2050238_+	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_010930721.1|2050340_2050715_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_019248531.1|2050967_2052299_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_019247651.1|2052365_2055596_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_003810344.1|2057086_2057833_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_010930724.1|2057917_2058379_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_010930725.1|2058416_2059475_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930726.1|2059437_2061267_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_003810356.1|2061306_2061879_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930727.1|2063303_2064125_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	4.1e-42
WP_010930728.1|2064443_2065766_+	isocitrate lyase	NA	NA	NA	NA	NA
WP_010930729.1|2066125_2066761_+	membrane protein	NA	NA	NA	NA	NA
WP_010930730.1|2066720_2067671_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930731.1|2068541_2069414_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930732.1|2069491_2070631_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930733.1|2070989_2072246_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_003816691.1|2072251_2072779_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_003816690.1|2072783_2073602_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816687.1|2073601_2074324_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930735.1|2074345_2074660_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930736.1|2074677_2075826_+	CoA transferase	NA	NA	NA	NA	NA
WP_010930737.1|2075856_2076732_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816680.1|2076728_2078048_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_014486081.1|2078120_2079317_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_010930739.1|2079327_2080815_-	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_010930740.1|2083409_2084309_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852887.1|2084446_2085412_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005015810.1|2085510_2086461_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2086682_2087633_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	2099129	2148525	4106394	transposase	Erysipelothrix_phage(16.67%)	45	NA	NA
WP_005013747.1|2099129_2100080_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812172.1|2101217_2101514_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247707.1|2101688_2103041_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
WP_010930153.1|2103183_2104200_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930748.1|2106179_2107193_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_010930749.1|2107279_2108185_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812179.1|2108341_2108686_+	exported protein	NA	NA	NA	NA	NA
WP_010930750.1|2108843_2109302_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_010930751.1|2109315_2111532_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_003812183.1|2111528_2112590_+	XdhC family protein	NA	NA	NA	NA	NA
WP_010930752.1|2112618_2113593_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930753.1|2113544_2114363_-	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
WP_003812191.1|2114375_2114984_-	LON peptidase substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930754.1|2115158_2115554_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930755.1|2115572_2117012_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
WP_003812199.1|2117040_2117388_+	GFA family protein	NA	NA	NA	NA	NA
WP_010929577.1|2117406_2118357_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2119009_2119960_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997035.1|2120043_2121861_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_019247659.1|2121934_2122582_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|2122594_2123524_-	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_014905663.1|2123693_2124158_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816977.1|2124405_2125086_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003816975.1|2125134_2126826_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_010930760.1|2126841_2127393_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816971.1|2127389_2127761_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930761.1|2127873_2128710_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_029443822.1|2128720_2129245_-	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|2129342_2129522_+	DUF3008 family protein	NA	NA	NA	NA	NA
WP_010930763.1|2129651_2130626_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003816964.1|2130756_2131113_+	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930764.1|2131102_2131978_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_010930765.1|2132076_2132961_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930766.1|2132982_2134278_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_003816959.1|2135226_2135877_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930767.1|2135964_2137485_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930768.1|2137742_2139608_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2140653_2141604_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268681.1|2141621_2141762_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930769.1|2142576_2142936_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_010930770.1|2142923_2144360_-	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930771.1|2144356_2145010_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930772.1|2145006_2146200_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930773.1|2146303_2147578_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_005012067.1|2147574_2148525_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	2159729	2200420	4106394	transposase,protease,tRNA	Klosneuvirus(25.0%)	37	NA	NA
WP_005013747.1|2159729_2160680_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2160778_2161729_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122784.1|2161688_2162102_-	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
WP_003816708.1|2162386_2162686_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930783.1|2163095_2165378_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.2e-36
WP_124740709.1|2165843_2166038_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930784.1|2166063_2168094_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
WP_006218592.1|2168113_2168326_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_003810720.1|2168603_2169143_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023852902.1|2169256_2170552_-	adenylosuccinate synthase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
WP_010930786.1|2170628_2171786_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_010930787.1|2171969_2172869_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_010930788.1|2172887_2174192_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930789.1|2174157_2175264_-	GTPase HflX	NA	NA	NA	NA	NA
WP_003810707.1|2175351_2175588_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930790.1|2175726_2176797_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810703.1|2176800_2178156_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_003810701.1|2178182_2179343_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_010930791.1|2179345_2179984_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_023995843.1|2179985_2181272_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930793.1|2181330_2182626_-	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_003810693.1|2182632_2183139_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_004568542.1|2183135_2184284_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810689.1|2184311_2184737_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_010930794.1|2185059_2187942_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_023852900.1|2188034_2188790_-	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930796.1|2189555_2190905_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_076879566.1|2191003_2191954_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930048.1|2192052_2193003_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930594.1|2193076_2193550_+	RidA family protein	NA	NA	NA	NA	NA
WP_010930593.1|2193575_2194784_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_003816734.1|2194780_2195554_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_014905757.1|2195553_2196177_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_010926757.1|2196342_2196603_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_010930591.1|2196906_2197488_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004568544.1|2197554_2197809_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930590.1|2197795_2200420_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
>prophage 21
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	2228203	2293752	4106394	transposase,protease,tRNA	Lake_Baikal_phage(20.0%)	58	NA	NA
WP_010929577.1|2228203_2229154_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930573.1|2229354_2230164_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_005013747.1|2230288_2231239_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930572.1|2231235_2232129_-	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_003812452.1|2232253_2232448_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_003812453.1|2232447_2232789_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_010930571.1|2232798_2234661_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	42.4	3.0e-101
WP_003812456.1|2234790_2235303_-	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA	NA
WP_003812458.1|2235305_2235629_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	52.8	6.8e-25
WP_003812460.1|2235630_2236041_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	79.0	7.5e-53
WP_010930570.1|2236078_2237290_-	IscS subfamily cysteine desulfurase	NA	NA	NA	NA	NA
WP_003812463.1|2237307_2237820_-	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA	NA
WP_010930569.1|2238035_2238527_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_010930568.1|2238779_2240816_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
WP_019247244.1|2240893_2242096_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_010930566.1|2242224_2242875_+	transcriptional repressor LexA	NA	A0A2H4JG58	uncultured_Caudovirales_phage	50.7	3.3e-10
WP_010929591.1|2244432_2245383_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247934.1|2245953_2246166_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247935.1|2246183_2246915_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812478.1|2246949_2247591_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010930565.1|2247583_2248252_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010930564.1|2250464_2251241_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930563.1|2251262_2252420_-	thiolase	NA	NA	NA	NA	NA
WP_003812491.1|2252416_2252848_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_015063637.1|2252844_2253648_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930561.1|2253661_2254063_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010930560.1|2254129_2255101_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930559.1|2255166_2256390_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247936.1|2256617_2257568_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930557.1|2257691_2260145_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
WP_010930556.1|2260333_2261638_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
WP_003812508.1|2261742_2262396_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
WP_010930555.1|2262398_2263709_-	trigger factor	NA	NA	NA	NA	NA
WP_010930554.1|2263905_2264466_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
WP_010930553.1|2264577_2264778_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
WP_003812519.1|2265123_2265690_-	DUF924 family protein	NA	NA	NA	NA	NA
WP_010930551.1|2265773_2265977_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
WP_003812524.1|2266283_2266604_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812526.1|2266645_2266927_-	membrane protein	NA	NA	NA	NA	NA
WP_010930550.1|2267001_2268258_-	autotransporter Phg	NA	NA	NA	NA	NA
WP_010930549.1|2268640_2268970_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003812536.1|2270540_2271362_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
WP_010930548.1|2271361_2272501_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
WP_019247938.1|2272507_2273404_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_010930546.1|2273400_2275326_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
WP_010926400.1|2275685_2278298_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_003812546.1|2278350_2280651_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
WP_003812548.1|2280647_2281856_-	fatty acid desaturase	NA	NA	NA	NA	NA
WP_010930545.1|2282117_2282492_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2282488_2283439_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879626.1|2283537_2285532_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
WP_010930543.1|2285591_2286557_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_010930542.1|2286546_2289408_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_010930541.1|2289410_2289917_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930540.1|2290021_2291230_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_033446178.1|2291231_2292170_-	membrane protein	NA	NA	NA	NA	NA
WP_010930538.1|2292331_2292805_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|2292801_2293752_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	2570550	2634766	4106394	transposase,protease,tRNA	Salmonella_phage(16.67%)	60	NA	NA
WP_004566381.1|2570550_2572038_-|protease	DegQ family serine endoprotease	protease	W5SAB9	Pithovirus	31.5	1.2e-07
WP_010930931.1|2572075_2573134_-	MucB/RseB C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_023853242.1|2573133_2573634_-	sigma-E factor negative regulatory protein	NA	NA	NA	NA	NA
WP_003813797.1|2573646_2574246_-	RNA polymerase sigma factor RpoE	NA	A0A0F6TH34	Sinorhizobium_phage	26.1	2.2e-05
WP_010930933.1|2574242_2574743_-	membrane protein	NA	NA	NA	NA	NA
WP_003813802.1|2574744_2575974_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA	NA
WP_003813816.1|2576163_2576403_-	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	46.6	5.4e-11
WP_003813819.1|2576585_2577338_-	3-oxoacyl-ACP reductase FabG	NA	Q06VL0	Trichoplusia_ni_ascovirus	31.3	6.9e-12
WP_010930934.1|2577339_2578275_-	ACP S-malonyltransferase	NA	NA	NA	NA	NA
WP_010930935.1|2578356_2579343_-	ketoacyl-ACP synthase III	NA	NA	NA	NA	NA
WP_003821347.1|2579342_2580401_-	phosphate acyltransferase PlsX	NA	NA	NA	NA	NA
WP_003813827.1|2580457_2580640_-	50S ribosomal protein L32	NA	NA	NA	NA	NA
WP_010930936.1|2580691_2581285_-	DUF177 domain-containing protein	NA	NA	NA	NA	NA
WP_003821345.1|2581393_2581993_+	septum formation protein Maf	NA	NA	NA	NA	NA
WP_010930937.1|2581989_2582700_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010930938.1|2582701_2583529_+	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA	NA
WP_003814009.1|2585345_2586587_-	MFS transporter	NA	NA	NA	NA	NA
WP_003814010.1|2586598_2587372_-	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_005012067.1|2587398_2588349_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814011.1|2588447_2589230_-	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003814012.1|2589318_2590545_-	cation:proton antiporter	NA	NA	NA	NA	NA
WP_003814013.1|2591270_2592656_+	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_003814014.1|2592674_2593280_+	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA	NA
WP_010930939.1|2593276_2595133_+	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA	NA
WP_003814016.1|2595129_2595930_+	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA	NA
WP_005013753.1|2595944_2597138_+	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA	NA
WP_003814017.1|2597205_2598180_+	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA	NA
WP_010930940.1|2598302_2599526_+	alcaligin siderophore export MFS transporter Bcr	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
WP_010930941.1|2599636_2601841_+	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA	NA
WP_003814020.1|2602135_2602795_+	NAAT family transporter	NA	NA	NA	NA	NA
WP_019247690.1|2602802_2603009_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814021.1|2603347_2604103_+	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_003814022.1|2604118_2604280_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814023.1|2604373_2604889_+	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
WP_003814024.1|2605161_2605479_+	virulence factor	NA	NA	NA	NA	NA
WP_170954289.1|2605423_2606068_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930944.1|2606193_2607549_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
WP_010930945.1|2607595_2608936_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
WP_010930946.1|2609037_2609670_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_003814032.1|2609669_2612030_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
WP_010930948.1|2612071_2613031_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
WP_010929073.1|2613017_2613704_+	Smr/MutS family protein	NA	NA	NA	NA	NA
WP_005015014.1|2613700_2614033_+	multidrug transporter	NA	NA	NA	NA	NA
WP_005012067.1|2614148_2615099_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|2615197_2616148_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814040.1|2616144_2618211_-	cation acetate symporter	NA	NA	NA	NA	NA
WP_003814042.1|2618210_2618483_-	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
WP_017685545.1|2619177_2619267_+	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_010930949.1|2619266_2621051_+	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_010930950.1|2621074_2623240_+	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
WP_003814050.1|2623250_2623850_+	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_003814052.1|2626671_2627367_+	two-component system response regulator KdpE	NA	NA	NA	NA	NA
WP_005013747.1|2627375_2628326_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015028.1|2628424_2629666_-	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_003814057.1|2629815_2630796_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814059.1|2630994_2632251_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
WP_003814061.1|2632453_2632879_+	DUF1841 family protein	NA	NA	NA	NA	NA
WP_003814063.1|2632920_2633283_-	cytochrome c	NA	NA	NA	NA	NA
WP_003814065.1|2633295_2633649_-	cytochrome c	NA	NA	NA	NA	NA
WP_005013747.1|2633815_2634766_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	2873557	2946883	4106394	transposase,protease,tRNA	Catovirus(22.22%)	52	NA	NA
WP_010930211.1|2873557_2874913_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003813618.1|2876391_2877114_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930207.1|2877168_2878152_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|2878281_2879232_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813621.1|2879228_2880131_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930206.1|2880218_2880977_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_023853245.1|2880989_2882081_-	cell division protein ZapE	NA	NA	NA	NA	NA
WP_003813626.1|2882178_2883606_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_010930204.1|2883835_2885050_-	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813631.1|2885095_2887966_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930202.1|2890376_2890865_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930201.1|2890990_2893687_+	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930200.1|2893841_2896124_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_019248935.1|2896298_2896922_+	serotype 2 fimbrial subunit	NA	NA	NA	NA	NA
WP_010930198.1|2897020_2897971_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812405.1|2898017_2898572_-	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_003816844.1|2898639_2899485_-	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_019248398.1|2899554_2900523_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_023995083.1|2900522_2901386_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_077598834.1|2904218_2908145_-	inverse autotransporter beta domain-containing protein	NA	NA	NA	NA	NA
WP_010930194.1|2908880_2912111_-	autotransporter SphB3	NA	NA	NA	NA	NA
WP_010928340.1|2912392_2913220_-	TatD family hydrolase	NA	NA	NA	NA	NA
WP_003812422.1|2913253_2913949_-	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	38.6	7.0e-35
WP_019247537.1|2913941_2915222_-	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930192.1|2915231_2916209_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930191.1|2916190_2917891_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.3	1.3e-50
WP_010926448.1|2917993_2919097_+	peptide chain release factor 2	NA	NA	NA	NA	NA
WP_010926447.1|2919127_2919883_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930190.1|2919889_2921410_+|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
WP_010930189.1|2921452_2921755_+	membrane protein	NA	NA	NA	NA	NA
WP_003812436.1|2921751_2922384_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930188.1|2922462_2924328_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_020699602.1|2924324_2925119_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.3	1.2e-11
WP_062826563.1|2925147_2926263_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930185.1|2927167_2928046_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930184.1|2928045_2928870_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010929591.1|2929037_2929988_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930183.1|2930200_2933050_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010930182.1|2933031_2933760_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_019248549.1|2933900_2935364_-	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930180.1|2935360_2935732_-	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|2935749_2937063_+	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_003812703.1|2937099_2937558_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2937670_2938621_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930178.1|2938617_2939631_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_003812707.1|2939770_2940757_+	homoserine kinase	NA	NA	NA	NA	NA
WP_161633091.1|2941115_2941823_-	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2942403_2943354_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809618.1|2943505_2944108_-	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_010930175.1|2944126_2944759_+	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_162096758.1|2944803_2945055_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930174.1|2944996_2946883_+|protease	ATP-dependent zinc metalloprotease FtsH	protease	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
>prophage 24
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	2958608	3008221	4106394	transposase,holin,tRNA	uncultured_Mediterranean_phage(50.0%)	42	NA	NA
WP_005013747.1|2958608_2959559_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809441.1|2959585_2960050_-	barstar family protein	NA	NA	NA	NA	NA
WP_014486065.1|2961256_2963545_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930165.1|2963661_2964534_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930164.1|2964576_2965731_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930163.1|2965765_2966596_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_023853525.1|2966679_2968224_+	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930161.1|2968266_2968626_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003819794.1|2968627_2969041_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_003809432.1|2969081_2969399_-	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003809431.1|2969483_2970200_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930160.1|2970463_2971885_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_019248433.1|2971951_2974699_-	pertactin autotransporter	NA	NA	NA	NA	NA
WP_023853536.1|2975031_2976048_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930157.1|2976383_2977025_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_003809423.1|2977115_2978552_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_023853534.1|2978709_2979783_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_010930155.1|2979779_2980916_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_003809416.1|2981060_2981405_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
WP_010930154.1|2981471_2983352_+	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_003809411.1|2983401_2984337_+	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
WP_010931363.1|2984669_2985686_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_015041211.1|2986623_2988051_+|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010930151.1|2988047_2989070_+	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_003809396.1|2989059_2989533_+	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930149.1|2989673_2990561_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_014486064.1|2990557_2992201_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_010930148.1|2992197_2993247_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_010931363.1|2994035_2995052_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003817162.1|2995151_2995784_-	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_003811911.1|2995792_2996182_-	chemotaxis response regulator CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_010930146.1|2996234_2997287_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_010930145.1|2998150_2999857_-	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_003811919.1|2999930_3000431_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930144.1|3000445_3002503_-	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_019247393.1|3002529_3002823_-	response regulator	NA	NA	NA	NA	NA
WP_003817154.1|3002924_3003872_-	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_003811927.1|3003884_3004760_-	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003811929.1|3004880_3005441_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_010930143.1|3005475_3005799_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811933.1|3006234_3006972_+	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_005012067.1|3007270_3008221_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	3029172	3101665	4106394	transposase	Bacillus_virus(16.67%)	57	NA	NA
WP_010929584.1|3029172_3030123_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003817151.1|3030165_3031341_+	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010930129.1|3031562_3033353_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_010930127.1|3035038_3037744_-	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_003817147.1|3038036_3039791_+	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930126.1|3039787_3040414_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003811948.1|3040410_3041262_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_019248379.1|3041337_3043452_+	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_010930124.1|3043638_3044253_+	SCO family protein	NA	NA	NA	NA	NA
WP_010930123.1|3044398_3044650_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_014486063.1|3044719_3046102_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930121.1|3046098_3049278_-	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_029443805.1|3050085_3051003_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930119.1|3051054_3051786_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_010926548.1|3051845_3052418_+	chorismate lyase	NA	NA	NA	NA	NA
WP_010929632.1|3053926_3054943_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|3055080_3056130_-	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_005012067.1|3056234_3057185_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813314.1|3057280_3058006_-	CoA pyrophosphatase	NA	NA	NA	NA	NA
WP_003813315.1|3058216_3058597_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_014905652.1|3058902_3059775_+	EamA family transporter	NA	NA	NA	NA	NA
WP_023852686.1|3059782_3060163_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023852693.1|3060316_3061591_-	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
WP_010930113.1|3063078_3063987_-	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_010930112.1|3064784_3065849_-	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
WP_170954292.1|3067685_3068687_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003813333.1|3068909_3069551_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_003821527.1|3069633_3071460_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010930111.1|3071703_3072633_-	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
WP_010930110.1|3072632_3073382_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_003821521.1|3073453_3074368_-	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
WP_010930108.1|3074387_3075533_+	lytic murein transglycosylase B	NA	NA	NA	NA	NA
WP_014486062.1|3075593_3076505_-	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
WP_005012067.1|3076585_3077536_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446303.1|3077634_3078219_-	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003821513.1|3078253_3079243_-	ADP-glyceromanno-heptose 6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
WP_010930105.1|3079239_3080181_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
WP_010930104.1|3080177_3081398_-	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
WP_010930103.1|3081440_3081755_-	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
WP_010930102.1|3081946_3082306_-	integration host factor subunit beta	NA	NA	NA	NA	NA
WP_010930101.1|3082307_3084023_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_010930100.1|3084210_3084882_-	(d)CMP kinase	NA	NA	NA	NA	NA
WP_010930099.1|3084896_3086225_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_010930098.1|3086221_3087121_-	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010930097.1|3087207_3088293_-	prephenate dehydratase	NA	NA	NA	NA	NA
WP_010930096.1|3088285_3089419_-	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	44.0	6.4e-78
WP_010930095.1|3089418_3092100_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
WP_010930094.1|3092470_3093052_+	OmpA family protein	NA	NA	NA	NA	NA
WP_010930093.1|3093177_3093903_+	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	NA	NA	NA	NA
WP_010930092.1|3093899_3094577_+	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_010930091.1|3094792_3095974_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930090.1|3096746_3096929_+	type II toxin-antitoxin system HicA family toxin	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
WP_005012808.1|3096958_3097909_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566317.1|3098038_3098431_+	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
WP_003821497.1|3098707_3099619_-	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
WP_010930088.1|3099743_3100718_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|3100714_3101665_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	3115172	3168690	4106394	transposase,holin	Bacillus_phage(33.33%)	44	NA	NA
WP_010930066.1|3115172_3116123_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810839.1|3116235_3116487_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|3116992_3118111_-	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810832.1|3118230_3118443_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930064.1|3118602_3118824_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|3118876_3119827_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930062.1|3121003_3122374_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_010930061.1|3122406_3123198_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930060.1|3123210_3124266_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019247557.1|3124291_3125167_-	amidohydrolase	NA	NA	NA	NA	NA
WP_023852826.1|3125272_3125521_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003819989.1|3125555_3127010_-	carboxylase	NA	NA	NA	NA	NA
WP_004568140.1|3127006_3127528_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_010930057.1|3127556_3128909_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_029444137.1|3129132_3132021_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930056.1|3134165_3135467_+	phospholipase A	NA	NA	NA	NA	NA
WP_010930055.1|3135481_3136198_-	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930054.1|3136479_3137160_+	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_003809770.1|3137171_3137339_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023852837.1|3137447_3137594_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930052.1|3137687_3138347_-	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_010930051.1|3138745_3140578_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_005012067.1|3140574_3141525_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814007.1|3142688_3144404_+	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
WP_003814006.1|3144414_3144906_+	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_010930015.1|3144978_3145995_+	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_003814004.1|3146162_3146942_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_003814003.1|3146960_3147488_-	lipoprotein	NA	NA	NA	NA	NA
WP_003814002.1|3147781_3148051_+	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_003821234.1|3148141_3150301_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003814000.1|3150421_3151141_+	lipoprotein	NA	NA	NA	NA	NA
WP_005013747.1|3151137_3152088_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813999.1|3152228_3153446_+	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_010930016.1|3153439_3154051_-	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
WP_003813997.1|3154684_3155662_+	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_003813996.1|3155805_3156552_+	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_010930017.1|3156573_3157020_+	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_010930018.1|3157807_3160039_+|holin	choline BCCT transporter BetT	holin	NA	NA	NA	NA
WP_003813993.1|3160061_3160862_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813992.1|3161143_3162376_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003813991.1|3162486_3163476_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930019.1|3163506_3164895_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003813988.1|3166493_3167477_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_023994644.1|3167673_3168690_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 27
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	3233148	3303199	4106394	transposase	Klosneuvirus(16.67%)	54	NA	NA
WP_041337087.1|3233148_3234099_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813068.1|3234095_3235115_-	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	35.7	1.5e-49
WP_010930049.1|3235124_3237833_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	24.0	2.8e-15
WP_010930050.1|3237980_3238637_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|3238735_3239686_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023998705.1|3239833_3240727_+	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_010930013.1|3240926_3242621_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010930012.1|3242655_3243582_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930011.1|3243650_3244748_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003818996.1|3244766_3245630_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.9	9.6e-34
WP_010930010.1|3245641_3246424_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_004566042.1|3246420_3247539_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010930009.1|3247535_3249068_+	acyl--CoA ligase	NA	NA	NA	NA	NA
WP_003818991.1|3249108_3250116_+	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_023999677.1|3250260_3250983_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930007.1|3250998_3252021_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_010930006.1|3252337_3253072_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930005.1|3253156_3254902_+	acetolactate synthase	NA	NA	NA	NA	NA
WP_010930004.1|3254898_3255651_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930003.1|3255695_3256652_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818983.1|3256740_3257307_+	membrane protein	NA	NA	NA	NA	NA
WP_010930002.1|3257314_3258175_-	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_020699739.1|3258204_3258933_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.4	3.4e-32
WP_003807497.1|3258964_3259648_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930000.1|3260485_3261400_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929999.1|3261464_3262373_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929998.1|3262463_3263888_-	TolC family protein	NA	NA	NA	NA	NA
WP_010929997.1|3263889_3265212_-	cyclolysin T1SS periplasmic adaptor subunit CyaD	NA	NA	NA	NA	NA
WP_010929996.1|3265208_3267347_-	cyclolysin T1SS permease/ATPase CyaB	NA	W8CYL7	Bacillus_phage	29.2	2.7e-45
WP_010929995.1|3267424_3272545_-	bifunctional adenylate cyclase toxin/hemolysin CyaA	NA	NA	NA	NA	NA
WP_153302771.1|3272645_3272954_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929994.1|3273023_3273581_+	cyclolysin-activating lysine-acyltransferase	NA	NA	NA	NA	NA
WP_010929993.1|3273596_3275078_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010929992.1|3277248_3278586_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929991.1|3278620_3280618_-	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929990.1|3280635_3282684_-	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929989.1|3282814_3283681_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929988.1|3283949_3284915_-	octaprenyl diphosphate synthase	NA	NA	NA	NA	NA
WP_010929987.1|3285029_3286178_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_003807462.1|3286602_3286914_+	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_003807460.1|3286947_3287208_+	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_003807459.1|3287357_3288491_+	GTPase ObgE	NA	NA	NA	NA	NA
WP_003807457.1|3288561_3289698_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	44.8	5.8e-63
WP_010925762.1|3289863_3290658_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003807452.1|3290720_3291164_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_014905499.1|3291279_3292230_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012808.1|3292328_3293279_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929985.1|3293380_3293809_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|3296297_3297248_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852739.1|3297207_3297732_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003814467.1|3297863_3298835_+	FecR family protein	NA	NA	NA	NA	NA
WP_010929983.1|3298954_3301399_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_010929982.1|3301414_3302005_-	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|3302248_3303199_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	3306407	3418758	4106394	terminase,tail,transposase,protease,tRNA	uncultured_Caudovirales_phage(13.79%)	118	NA	NA
WP_005013747.1|3306407_3307358_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814459.1|3307358_3307928_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929980.1|3307995_3308811_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929979.1|3308977_3310597_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929978.1|3310675_3311617_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929977.1|3311616_3312501_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010927038.1|3312504_3314157_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
WP_010929976.1|3314196_3315594_+	amidase family protein	NA	NA	NA	NA	NA
WP_019247242.1|3315635_3317015_+	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_003814443.1|3317054_3317273_-	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
WP_003814441.1|3317613_3318486_+	oxaloacetate decarboxylase	NA	NA	NA	NA	NA
WP_005012067.1|3318645_3319596_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814437.1|3320327_3320705_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_003814436.1|3320689_3321391_-	membrane protein	NA	NA	NA	NA	NA
WP_010931409.1|3321534_3322227_-	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_010931410.1|3322226_3323330_-	phosphotransferase	NA	NA	NA	NA	NA
WP_010931411.1|3323439_3325812_+	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931412.1|3325808_3327368_+	chaperone SurA	NA	NA	NA	NA	NA
WP_010931413.1|3327392_3328190_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931414.1|3328221_3329367_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_003814419.1|3329471_3330914_+	pyruvate kinase	NA	NA	NA	NA	NA
WP_010929184.1|3330916_3332146_-	spore maturation protein	NA	NA	NA	NA	NA
WP_005012808.1|3334283_3335234_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247922.1|3336363_3336921_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247923.1|3336896_3337247_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814657.1|3337415_3338210_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_010931416.1|3338206_3339256_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814652.1|3339255_3339945_-	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_003814650.1|3340031_3340529_-	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_010931417.1|3340560_3341877_-	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_010931418.1|3341893_3342868_-	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_003814643.1|3342904_3343363_-	protein TolR	NA	NA	NA	NA	NA
WP_003814641.1|3343362_3344043_-	protein TolQ	NA	NA	NA	NA	NA
WP_010931419.1|3344045_3344474_-	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814636.1|3344526_3346257_-|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_003814635.1|3346322_3346895_+	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_010931420.1|3346875_3347562_+	response regulator	NA	NA	NA	NA	NA
WP_010931421.1|3347917_3348589_+	SOS response-associated peptidase	NA	Q5QF62	Pseudomonas_virus	39.9	4.7e-36
WP_010931422.1|3348917_3349139_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010926433.1|3349138_3349420_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931423.1|3349416_3349932_-	DUF2514 family protein	NA	NA	NA	NA	NA
WP_010931424.1|3349931_3350483_-	lysozyme	NA	NA	NA	NA	NA
WP_010931425.1|3350461_3350704_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931426.1|3350708_3351521_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926428.1|3351520_3351784_-	hypothetical protein	NA	NA	NA	NA	NA
WP_124740660.1|3351824_3352022_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931428.1|3352002_3352419_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931429.1|3352423_3356380_-	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
WP_010931430.1|3356372_3356762_-	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931431.1|3356758_3357292_-	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931432.1|3357359_3357719_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931433.1|3357728_3360341_-|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931434.1|3360366_3360657_-	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_003813412.1|3360674_3361004_-|tail	phage tail assembly chaperone	tail	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931435.1|3361013_3361532_-|tail	phage tail protein	tail	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_010931436.1|3361786_3362287_-	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931437.1|3362294_3362717_-	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931438.1|3362713_3363112_-	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931439.1|3363108_3363504_-	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931440.1|3363503_3363704_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|3363705_3364188_-	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_010931442.1|3364250_3364502_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|3365176_3366127_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931443.1|3366555_3367158_-	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_010931444.1|3367280_3367523_-	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931445.1|3367528_3368584_-	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931446.1|3368612_3370031_-	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931447.1|3370033_3371311_-|terminase	terminase large subunit	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_019247942.1|3371297_3371783_-|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_005012067.1|3372422_3373373_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_161633094.1|3373629_3374319_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853179.1|3374311_3374563_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931451.1|3375117_3375729_+	S24 family peptidase	NA	NA	NA	NA	NA
WP_019247378.1|3375800_3376007_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3376258_3377209_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248926.1|3377307_3378381_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931475.1|3378548_3379343_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010925795.1|3379382_3379907_-	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931474.1|3379899_3381642_-	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010931473.1|3381851_3382610_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931472.1|3382612_3383320_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931471.1|3383336_3384218_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_019247734.1|3384228_3384987_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_019248554.1|3384955_3385711_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931468.1|3385780_3387199_+	amidase	NA	NA	NA	NA	NA
WP_003819076.1|3387220_3387871_-	carbonic anhydrase	NA	NA	NA	NA	NA
WP_033446132.1|3388004_3388340_-	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_010930800.1|3388428_3389379_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931467.1|3389455_3391276_+	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010931466.1|3391280_3392354_-	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_003814230.1|3392476_3393445_+	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010927008.1|3393518_3394430_+	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814226.1|3394448_3395021_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010931465.1|3395101_3395650_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_010931464.1|3395649_3397239_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_003814221.1|3397308_3397548_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_023995141.1|3397588_3398614_-|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814217.1|3398679_3399861_-	UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase	NA	NA	NA	NA	NA
WP_010931463.1|3399957_3400410_+	membrane protein	NA	NA	NA	NA	NA
WP_010931462.1|3400419_3401760_-	aminopeptidase P N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931461.1|3402076_3403114_+	sodium:calcium antiporter	NA	NA	NA	NA	NA
WP_003814209.1|3403495_3403855_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041166340.1|3403938_3404880_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879617.1|3404954_3405905_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814206.1|3406198_3407293_+	porin	NA	NA	NA	NA	NA
WP_003814205.1|3407374_3408256_+	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814203.1|3408277_3409117_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_010931459.1|3409192_3410710_+|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_010931458.1|3410806_3411907_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931457.1|3411923_3412346_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_003814195.1|3412368_3412581_-	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931456.1|3412627_3413548_-	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_010931455.1|3413730_3414480_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_003814188.1|3414482_3414812_+	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_010931454.1|3415018_3416452_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
WP_003814185.1|3416463_3416847_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_010931453.1|3416908_3417709_+	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_005015810.1|3417807_3418758_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 30
NZ_CP010846	Bordetella pertussis strain H563 chromosome, complete genome	4106394	4028565	4081997	4106394	transposase	Planktothrix_phage(40.0%)	45	NA	NA
WP_010931661.1|4028565_4029516_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931662.1|4029685_4030912_+	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA	NA
WP_010931663.1|4031111_4031978_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_003815027.1|4031970_4032933_+	Nudix family hydrolase	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
WP_010927663.1|4033033_4033984_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|4034082_4035033_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|4035131_4036082_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994937.1|4036078_4037572_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_003815032.1|4037568_4040676_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931665.1|4040672_4043741_-	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931666.1|4043737_4044988_-	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_003815038.1|4045168_4045930_-	cell division protein ZapD	NA	NA	NA	NA	NA
WP_019247320.1|4045962_4046613_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_003820519.1|4046615_4047455_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_003815047.1|4047695_4048439_+	copper resistance protein NlpE N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_003815049.1|4048521_4048869_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815051.1|4048966_4049809_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_003815053.1|4049853_4050741_-	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_003815055.1|4050767_4050956_-	DUF3460 family protein	NA	NA	NA	NA	NA
WP_010931669.1|4051053_4052511_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010931670.1|4052497_4054024_+	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_003815061.1|4054042_4054510_-	CopD family protein	NA	NA	NA	NA	NA
WP_010931671.1|4054509_4055532_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_169507388.1|4055652_4056372_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.9	4.7e-34
WP_003815066.1|4056447_4057548_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815068.1|4057549_4058740_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815070.1|4058859_4059876_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
WP_003815073.1|4060194_4060866_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
WP_010927126.1|4060862_4061771_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_010931672.1|4061982_4062630_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
WP_010931673.1|4066481_4067558_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_003815084.1|4067568_4068378_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815086.1|4068467_4069241_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010930363.1|4069423_4070374_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077274100.1|4070262_4071285_+	CoA transferase	NA	NA	NA	NA	NA
WP_010931674.1|4071274_4072429_+	CoA transferase	NA	NA	NA	NA	NA
WP_010931675.1|4072468_4073881_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_019247370.1|4074005_4074872_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931677.1|4074873_4075698_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_023853488.1|4075694_4076456_+	nitroreductase	NA	M1I6Q5	Acanthocystis_turfacea_Chlorella_virus	31.0	2.0e-19
WP_003808010.1|4076536_4077223_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931679.1|4077396_4078404_+	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA	NA
WP_003819309.1|4078400_4079180_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931680.1|4079237_4080500_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929591.1|4081046_4081997_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
