The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP010962	Bordetella pertussis strain H627 chromosome, complete genome	4107408	27282	70036	4107408	transposase,tRNA	Synechococcus_phage(50.0%)	41	NA	NA
WP_010930363.1|27282_28233_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_019247164.1|29141_30359_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|32214_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|34625_35576_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|37012_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41318_42212_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_010929588.1|43663_44614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|45200_45749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45720_45957_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46084_46978_+	AEC family transporter	NA	NA	NA	NA	NA
WP_010929590.1|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|50141_51092_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|51134_52391_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|54362_54953_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|54977_55667_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|57497_58448_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|59248_60475_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_047122776.1|60474_60888_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|61077_62019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248755.1|62442_63417_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929599.1|63473_64055_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010929600.1|64067_64370_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|64488_65547_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|65581_66853_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|67482_68664_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929584.1|69085_70036_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP010962	Bordetella pertussis strain H627 chromosome, complete genome	4107408	77633	136107	4107408	transposase,tRNA	Planktothrix_phage(22.22%)	54	NA	NA
WP_005012067.1|77633_78584_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|78658_79603_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929608.1|79599_81474_-	O-antigen biosynthesis protein WlbL	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
WP_003807102.1|82821_83526_-	O-antigen biosynthesis protein WlbI	NA	NA	NA	NA	NA
WP_010929609.1|83522_84695_-	O-antigen biosynthesis protein WlbH	NA	NA	NA	NA	NA
WP_010929610.1|84890_85484_-	O-antigen biosynthesis protein WlbG	NA	NA	NA	NA	NA
WP_010929611.1|85480_86713_-	O-antigen biosynthesis protein WlbF	NA	NA	NA	NA	NA
WP_010929612.1|86730_87990_-	O-antigen biosynthesis protein WlbE	NA	NA	NA	NA	NA
WP_010929613.1|88013_89102_-	O-antigen biosynthesis protein WlbD	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
WP_010929614.1|89109_90210_-	O-antigen biosynthesis protein WlbC	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
WP_003807114.1|90213_90789_-	O-antigen biosynthesis protein WlbB	NA	NA	NA	NA	NA
WP_003807115.1|90792_91845_-	O-antigen biosynthesis protein WlbA	NA	NA	NA	NA	NA
WP_010929615.1|91975_92983_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
WP_010929616.1|92984_94271_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_003807124.1|94287_94443_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929617.1|94467_95271_-	type III pantothenate kinase	NA	NA	NA	NA	NA
WP_010929618.1|95267_96134_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_010929619.1|96208_97339_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003807131.1|97338_98178_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
WP_010929620.1|99110_99713_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010929621.1|99742_100396_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003807138.1|100528_101785_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
WP_010929622.1|101832_102732_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_003818417.1|102807_103083_+	YbeD family protein	NA	NA	NA	NA	NA
WP_010929623.1|103090_103753_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_003807146.1|103814_104816_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_003807148.1|104830_105379_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
WP_010929624.1|105436_106333_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_010929625.1|106329_107391_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
WP_010929626.1|107426_108377_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|109276_110470_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|110551_111181_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|111242_111926_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|111935_113618_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|113905_114253_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|114343_114661_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|114943_115960_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|116035_116836_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|116832_117708_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|117718_119011_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|119053_120094_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|120199_121021_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|121121_122072_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905488.1|122170_123076_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
WP_003815918.1|123072_123906_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010929637.1|124742_125753_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_019247800.1|125749_126139_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929638.1|127032_128286_+	amidase	NA	NA	NA	NA	NA
WP_010929639.1|128376_130077_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_010929640.1|130503_131151_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853393.1|131149_132589_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_003815905.1|132681_132984_+	bacterioferritin-associated ferredoxin	NA	NA	NA	NA	NA
WP_010929512.1|133011_133890_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|135156_136107_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP010962	Bordetella pertussis strain H627 chromosome, complete genome	4107408	164892	225403	4107408	transposase,protease,tRNA	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	51	NA	NA
WP_005015810.1|164892_165843_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|167286_168189_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|168166_168796_-	LemA family protein	NA	NA	NA	NA	NA
WP_010929660.1|169078_170509_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.8	5.8e-44
WP_010929661.1|170542_171172_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|171220_172828_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|172852_173536_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|173617_174094_-	bacterioferritin	NA	NA	NA	NA	NA
WP_010929591.1|174300_175251_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929664.1|176366_176894_+	META domain-containing protein	NA	NA	NA	NA	NA
WP_010929665.1|176985_177801_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_003808370.1|177861_178596_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010929666.1|178633_180712_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|180961_181234_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446322.1|181335_182421_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|182424_184329_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_014486044.1|184325_188000_+	translocation/assembly module TamB domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|188060_188624_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|188631_189054_-	VOC family protein	NA	NA	NA	NA	NA
WP_010929671.1|189081_189501_-	VOC family protein	NA	NA	NA	NA	NA
WP_076879599.1|189529_190003_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	31.1	2.2e-11
WP_003808391.1|190102_190600_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|190754_193025_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_010929672.1|193073_194306_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929591.1|194404_195355_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929673.1|195457_196093_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.8e-83
WP_019248671.1|196089_196983_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|197377_198478_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|198559_198934_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|198993_201858_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|202002_202743_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|202812_204024_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|204052_205021_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931070.1|205634_206585_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|206741_207065_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_023853200.1|207169_208210_-	cyclase family protein	NA	NA	NA	NA	NA
WP_010929697.1|208215_208995_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|209040_209337_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|209362_209638_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|209694_210339_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|210338_211025_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010929695.1|211154_212006_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|212056_212782_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|212813_214163_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|214274_215207_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033455792.1|215664_218460_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_010929690.1|219053_221996_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|222067_222787_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|222825_223374_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|223528_224428_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|224452_225403_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP010962	Bordetella pertussis strain H627 chromosome, complete genome	4107408	233335	286923	4107408	transposase,protease,tRNA	Bacillus_phage(25.0%)	48	NA	NA
WP_005012067.1|233335_234286_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|234372_235323_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|235319_236270_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929700.1|236368_237166_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003814363.1|238115_238526_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_003814358.1|239547_240291_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814356.1|240334_241378_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814355.1|241548_243651_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814351.1|245061_246018_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929701.1|246036_246528_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_010929702.1|246524_247880_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929703.1|247880_248579_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929704.1|248575_249277_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_003814339.1|249529_250579_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_003814337.1|250684_251626_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|251622_253512_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814332.1|253598_254237_+	VTT domain-containing protein	NA	NA	NA	NA	NA
WP_019247543.1|254379_255765_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|255695_256232_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|256383_257775_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|257791_258772_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|258907_259891_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|259955_260855_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|260961_262716_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|262723_263848_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|263861_264842_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|265572_266523_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929712.1|267082_267628_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929713.1|267711_269331_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|269346_270501_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|270514_270640_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|270636_272388_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|272384_274064_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929716.1|274126_274675_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
WP_010929717.1|275817_276096_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|277139_278090_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_173651708.1|278107_278254_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929718.1|278367_278529_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_010929719.1|278536_278677_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815821.1|279195_279645_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_003815819.1|279654_280266_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_019247426.1|280424_281279_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|281298_282681_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|282745_283387_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|283526_283985_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|284009_284786_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|284839_285976_+	trypsin-like peptidase domain-containing protein	NA	W5SAB9	Pithovirus	31.2	1.2e-07
WP_005015810.1|285972_286923_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP010962	Bordetella pertussis strain H627 chromosome, complete genome	4107408	390855	448363	4107408	transposase	Orpheovirus(14.29%)	50	NA	NA
WP_005012067.1|390855_391806_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927231.1|391942_392860_+	reductase	NA	NA	NA	NA	NA
WP_003815842.1|392856_393105_+	glutaredoxin family protein	NA	NA	NA	NA	NA
WP_003815840.1|393101_394307_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486045.1|394379_395375_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486046.1|395397_396618_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486047.1|396614_397259_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248476.1|398989_399799_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486048.1|400103_401057_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	5.6e-59
WP_014486049.1|401155_402139_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486050.1|402065_402767_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486051.1|402815_403586_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_019247259.1|403582_404761_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486052.1|404928_406635_-	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA	NA
WP_014486053.1|406631_407528_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486054.1|407568_409158_-	rhodanese homology domain-containing protein	NA	NA	NA	NA	NA
WP_003807867.1|409207_410200_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807865.1|410268_410868_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486055.1|411328_412309_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929577.1|412384_413335_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122777.1|413423_414338_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929782.1|414334_414994_+	LysE family translocator	NA	NA	NA	NA	NA
WP_003814709.1|415083_416007_+	alpha/beta fold hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
WP_010929783.1|416012_416468_-	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA	NA
WP_010929784.1|416464_417568_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
WP_157734656.1|417526_417796_+	GtrA family protein	NA	NA	NA	NA	NA
WP_010927086.1|417755_419375_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_003814720.1|419371_420430_-	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
WP_033446199.1|420559_421054_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_022997984.1|421146_422124_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929785.1|422319_423525_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_010929786.1|423521_425033_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_003814726.1|425048_426362_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_003814728.1|426552_426732_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814730.1|427141_427876_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
WP_010929577.1|430320_431271_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247421.1|431402_431801_-	GTP-binding protein	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
WP_003814701.1|432211_432682_-	universal stress protein	NA	NA	NA	NA	NA
WP_003820700.1|432770_433115_-	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
WP_010929788.1|433214_434615_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010929789.1|436402_436921_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
WP_003814694.1|437031_437787_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
WP_003814691.1|437982_439215_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929791.1|439207_439993_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_003814685.1|440059_441031_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814681.1|441041_442019_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247419.1|442144_443317_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929793.1|443343_444372_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003814674.1|444437_445631_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|447412_448363_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP010962	Bordetella pertussis strain H627 chromosome, complete genome	4107408	590417	704171	4107408	protease,terminase,tail,transposase,tRNA	uncultured_Caudovirales_phage(14.81%)	113	NA	NA
WP_005013747.1|590417_591368_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023998122.1|591864_592734_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_010931496.1|592730_593552_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_019247235.1|593751_594243_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_019247236.1|594261_595335_+	CHAD domain-containing protein	NA	NA	NA	NA	NA
WP_023853086.1|595381_596485_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_003808577.1|596560_597181_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_003808574.1|597201_597711_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.1	1.2e-28
WP_003808570.1|597765_598017_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.4	1.6e-18
WP_010931494.1|598080_599214_+	benzoate/H(+) symporter BenE family transporter	NA	NA	NA	NA	NA
WP_003808567.1|599221_599608_-	MOSC N-terminal beta barrel domain-containing protein	NA	NA	NA	NA	NA
WP_010931493.1|599604_602124_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003808563.1|602552_602891_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003808562.1|602887_603394_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010931492.1|603455_604256_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931491.1|604366_605308_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931490.1|605401_606937_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931489.1|608616_610467_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.2	1.6e-17
WP_003808549.1|610470_611304_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931488.1|611303_612245_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931487.1|612496_613468_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931486.1|613609_615898_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003808542.1|616203_617112_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010931485.1|617166_618132_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931484.1|618206_619868_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010931483.1|619939_620650_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_154698388.1|620616_620781_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|620798_621749_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814152.1|622447_622831_+	membrane protein	NA	NA	NA	NA	NA
WP_010927005.1|622888_623491_+	DUF2946 family protein	NA	NA	NA	NA	NA
WP_005013747.1|623487_624438_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820995.1|624557_624959_-	DoxX family protein	NA	NA	NA	NA	NA
WP_003814158.1|625092_625986_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931481.1|625982_626564_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_003814165.1|627358_628093_+	arginyltransferase	NA	NA	NA	NA	NA
WP_010931480.1|628133_629183_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_003814172.1|629330_629909_-	TIGR01841 family phasin	NA	NA	NA	NA	NA
WP_010931479.1|630295_631273_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
WP_010931478.1|631366_635761_-	dermonecrotic toxin	NA	NA	NA	NA	NA
WP_003814178.1|635961_636810_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931477.1|636968_637781_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
WP_005015810.1|637836_638787_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931453.1|638885_639686_-	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_003814185.1|639747_640131_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_010931454.1|640142_641576_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
WP_003814188.1|641782_642112_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_010931455.1|642114_642864_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010931456.1|643046_643967_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_003814195.1|644013_644226_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931457.1|644248_644671_+	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_010931458.1|644687_645788_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931459.1|645884_647402_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_003814203.1|647477_648317_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_003814205.1|648338_649220_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814206.1|649301_650396_-	porin	NA	NA	NA	NA	NA
WP_076879617.1|650689_651640_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166340.1|651714_652656_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814209.1|652739_653099_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931461.1|653480_654518_-	sodium:calcium antiporter	NA	NA	NA	NA	NA
WP_010931462.1|654834_656175_+	aminopeptidase P N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931463.1|656184_656637_-	membrane protein	NA	NA	NA	NA	NA
WP_003814217.1|656733_657915_+	UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase	NA	NA	NA	NA	NA
WP_023995141.1|657980_659006_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814221.1|659046_659286_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931464.1|659355_660945_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_010931465.1|660944_661493_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_003814226.1|661573_662146_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010927008.1|662164_663076_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814230.1|663149_664118_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931466.1|664240_665314_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_010931467.1|665318_667139_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010930800.1|667215_668166_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446132.1|668254_668590_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_003819076.1|668723_669374_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_010931468.1|669395_670814_-	amidase	NA	NA	NA	NA	NA
WP_019248554.1|670883_671639_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247734.1|671607_672366_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931471.1|672376_673258_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931472.1|673274_673982_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931473.1|673984_674743_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931474.1|674952_676695_+	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010925795.1|676687_677212_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931475.1|677251_678046_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248926.1|678213_679287_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|679385_680336_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247378.1|680587_680794_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931451.1|680865_681477_-	S24 family peptidase	NA	NA	NA	NA	NA
WP_023853179.1|682031_682283_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_161633094.1|682275_682965_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853183.1|682982_683204_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|683221_684172_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247942.1|684811_685297_+|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_010931447.1|685283_686561_+|terminase	terminase large subunit	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_010931446.1|686563_687982_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931445.1|688010_689066_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931444.1|689071_689314_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931443.1|689436_690039_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_005012808.1|690467_691418_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931442.1|692092_692344_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|692406_692889_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_010931440.1|692890_693091_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931439.1|693090_693486_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931438.1|693482_693881_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931437.1|693877_694300_+	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931436.1|694307_694808_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931435.1|695062_695581_+|tail	phage tail protein	tail	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_003813412.1|695590_695920_+|tail	phage tail assembly chaperone	tail	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931434.1|695937_696228_+	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_010931433.1|696253_698866_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931432.1|698875_699235_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931431.1|699302_699836_+	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931430.1|699832_700222_+	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931429.1|700214_704171_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
>prophage 7
NZ_CP010962	Bordetella pertussis strain H627 chromosome, complete genome	4107408	710337	764267	4107408	transposase,tRNA	Planktothrix_phage(50.0%)	46	NA	NA
WP_003814636.1|710337_712068_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_010931419.1|712120_712549_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814641.1|712551_713232_+	protein TolQ	NA	NA	NA	NA	NA
WP_003814643.1|713231_713690_+	protein TolR	NA	NA	NA	NA	NA
WP_010931418.1|713726_714701_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_010931417.1|714717_716034_+	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_003814650.1|716065_716563_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_003814652.1|716649_717339_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_010931416.1|717338_718388_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814657.1|718384_719179_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_019247923.1|719347_719698_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247922.1|719673_720231_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012808.1|721360_722311_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929184.1|724448_725678_+	spore maturation protein	NA	NA	NA	NA	NA
WP_003814419.1|725680_727123_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_010931414.1|727227_728373_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_010931413.1|728404_729202_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931412.1|729226_730786_-	chaperone SurA	NA	NA	NA	NA	NA
WP_010931411.1|730782_733155_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931410.1|733264_734368_+	phosphotransferase	NA	NA	NA	NA	NA
WP_010931409.1|734367_735060_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_003814436.1|735203_735905_+	membrane protein	NA	NA	NA	NA	NA
WP_003814437.1|735889_736267_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_005012067.1|736998_737949_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814441.1|738108_738981_-	oxaloacetate decarboxylase	NA	NA	NA	NA	NA
WP_003814443.1|739321_739540_+	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
WP_019247242.1|739579_740959_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010929976.1|741000_742398_-	amidase family protein	NA	NA	NA	NA	NA
WP_010927038.1|742437_744090_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
WP_010929977.1|744093_744978_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929978.1|744977_745919_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929979.1|745997_747617_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929980.1|747783_748599_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814459.1|748666_749236_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|749236_750187_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814461.1|750841_751939_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_003814462.1|751972_753238_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929591.1|753395_754346_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929982.1|754589_755180_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929983.1|755195_757640_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_003814467.1|757759_758731_-	FecR family protein	NA	NA	NA	NA	NA
WP_023852739.1|758862_759387_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_005012067.1|759346_760297_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929984.1|760518_762714_-	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_010929985.1|762786_763215_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012808.1|763316_764267_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
NZ_CP010962	Bordetella pertussis strain H627 chromosome, complete genome	4107408	855145	914971	4107408	transposase,holin	Vibrio_phage(25.0%)	48	NA	NA
WP_010929591.1|855145_856096_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247352.1|856113_856668_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813949.1|856669_857104_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003813951.1|857100_857535_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003813952.1|857518_858322_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_003813954.1|858338_859154_-	metallophosphoesterase	NA	NA	NA	NA	NA
WP_019248500.1|859150_859966_-	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_010930033.1|860112_860814_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813960.1|860841_862800_-|holin	choline BCCT transporter BetT	holin	A0A2I7QNT1	Vibrio_phage	30.3	8.0e-28
WP_010930032.1|864052_864721_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_010930031.1|864844_865951_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010930030.1|865963_869077_+	MexW/MexI family multidrug efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.5	4.5e-57
WP_010930029.1|869073_870567_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010926969.1|870581_871253_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_003813974.1|871296_871791_-	azurin	NA	NA	NA	NA	NA
WP_010930027.1|871931_872579_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_023853163.1|872682_874731_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010930025.1|874727_876740_+	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010930024.1|876765_878100_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_003813981.1|878208_879201_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813982.1|879267_881352_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_010930023.1|881376_882348_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930022.1|882476_883508_-	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_010930021.1|883511_884663_-	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_076879542.1|884833_885757_+	transcriptional regulator LrhA	NA	NA	NA	NA	NA
WP_003813987.1|885834_886659_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_023994644.1|886855_887872_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003813988.1|888068_889052_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930019.1|890650_892039_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003813991.1|892069_893059_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813992.1|893169_894402_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003813993.1|894683_895484_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930018.1|895506_897738_-|holin	choline BCCT transporter BetT	holin	NA	NA	NA	NA
WP_010930017.1|898525_898972_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_003813996.1|898993_899740_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_003813997.1|899883_900861_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930016.1|901494_902106_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
WP_003813999.1|902099_903317_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_005013747.1|903457_904408_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814000.1|904404_905124_-	lipoprotein	NA	NA	NA	NA	NA
WP_003821234.1|905244_907404_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003814002.1|907494_907764_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_003814003.1|908057_908585_+	lipoprotein	NA	NA	NA	NA	NA
WP_003814004.1|908603_909383_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930015.1|909550_910567_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_003814006.1|910639_911131_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_003814007.1|911141_912857_-	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
WP_005012067.1|914020_914971_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP010962	Bordetella pertussis strain H627 chromosome, complete genome	4107408	935718	1070875	4107408	transposase,tRNA	uncultured_Caudovirales_phage(10.53%)	115	NA	NA
WP_005012067.1|935718_936669_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930064.1|936721_936943_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810832.1|937102_937315_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|937434_938553_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810839.1|939058_939310_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930066.1|939422_940373_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810840.1|940369_940753_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_023852913.1|940807_942622_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_010930068.1|942771_943599_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_010930069.1|943644_944625_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003810850.1|944621_944834_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810851.1|944830_946012_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_019248496.1|946175_946910_+	metallophosphoesterase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_010930071.1|946911_949524_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_003810859.1|949659_951573_-	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930072.1|952188_952599_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810865.1|952696_953782_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_005012067.1|953880_954831_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930088.1|954827_955802_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003821497.1|955926_956838_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
WP_004566317.1|957114_957507_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
WP_005012808.1|957636_958587_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930090.1|958616_958799_-	type II toxin-antitoxin system HicA family toxin	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
WP_010930091.1|959571_960753_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930092.1|960968_961646_-	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_010930093.1|961642_962368_-	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	NA	NA	NA	NA
WP_010930094.1|962493_963075_-	OmpA family protein	NA	NA	NA	NA	NA
WP_010930095.1|963445_966127_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
WP_010930096.1|966126_967260_+	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	44.0	6.4e-78
WP_010930097.1|967252_968338_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_010930098.1|968424_969324_+	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010930099.1|969320_970649_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_010930100.1|970663_971335_+	(d)CMP kinase	NA	NA	NA	NA	NA
WP_010930101.1|971522_973238_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_010930102.1|973239_973599_+	integration host factor subunit beta	NA	NA	NA	NA	NA
WP_010930103.1|973790_974105_+	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
WP_010930104.1|974147_975368_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
WP_010930105.1|975364_976306_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
WP_003821513.1|976302_977292_+	ADP-glyceromanno-heptose 6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
WP_033446303.1|977326_977911_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|978009_978960_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486062.1|979040_979952_+	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
WP_010930108.1|980012_981158_-	lytic murein transglycosylase B	NA	NA	NA	NA	NA
WP_003821521.1|981177_982092_+	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
WP_010930110.1|982163_982913_+	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_010930111.1|982912_983842_+	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
WP_003821527.1|984085_985912_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003813333.1|985994_986636_+	peroxiredoxin	NA	NA	NA	NA	NA
WP_170954292.1|986858_987860_+	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930112.1|989696_990761_+	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
WP_010930113.1|991558_992467_+	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_023852693.1|993954_995229_+	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
WP_023852686.1|995382_995763_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014905652.1|995770_996643_-	EamA family transporter	NA	NA	NA	NA	NA
WP_003813315.1|996948_997329_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_003813314.1|997539_998265_+	CoA pyrophosphatase	NA	NA	NA	NA	NA
WP_005012067.1|998360_999311_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|999415_1000465_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_010929632.1|1000602_1001619_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010926548.1|1003127_1003700_-	chorismate lyase	NA	NA	NA	NA	NA
WP_010930119.1|1003759_1004491_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_029443805.1|1004542_1005460_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930121.1|1006267_1009447_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_014486063.1|1009443_1010826_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930123.1|1010895_1011147_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_010930124.1|1011292_1011907_-	SCO family protein	NA	NA	NA	NA	NA
WP_019248379.1|1012093_1014208_-	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_003811948.1|1014283_1015135_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_010930126.1|1015131_1015758_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003817147.1|1015754_1017509_-	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930127.1|1017801_1020507_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_010930129.1|1022192_1023983_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_003817151.1|1024204_1025380_-	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010929584.1|1025422_1026373_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930130.1|1026471_1027212_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_010930131.1|1027406_1029443_+	transketolase	NA	NA	NA	NA	NA
WP_010930132.1|1029460_1030471_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010930133.1|1030588_1031782_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_010930134.1|1031811_1032585_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010930135.1|1032581_1033772_-	acetate kinase	NA	NA	NA	NA	NA
WP_003809454.1|1033797_1034736_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_010930136.1|1034732_1037081_-	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
WP_010930137.1|1037235_1037877_-	glutathione transferase	NA	NA	NA	NA	NA
WP_023853531.1|1037980_1039114_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994624.1|1039206_1039359_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930138.1|1039390_1039939_-	DinB family protein	NA	NA	NA	NA	NA
WP_003819814.1|1039957_1040443_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003809467.1|1041560_1041878_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247197.1|1041923_1042868_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010930141.1|1044548_1045199_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_003809479.1|1045252_1045588_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930142.1|1045584_1046445_+	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
WP_003819817.1|1046461_1046743_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003809486.1|1046816_1047080_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_005012067.1|1047323_1048274_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811933.1|1048572_1049310_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_010930143.1|1049745_1050069_+	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811929.1|1050103_1050664_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_003811927.1|1050784_1051660_+	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003817154.1|1051672_1052620_+	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_019247393.1|1052721_1053015_+	response regulator	NA	NA	NA	NA	NA
WP_010930144.1|1053041_1055099_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_003811919.1|1055113_1055614_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930145.1|1055687_1057394_+	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_010930146.1|1058257_1059310_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_003811911.1|1059362_1059752_+	chemotaxis response regulator CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_003817162.1|1059760_1060393_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_010931363.1|1060492_1061509_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930148.1|1062297_1063347_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_014486064.1|1063343_1064987_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_010930149.1|1064983_1065871_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003809396.1|1066011_1066485_-	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930151.1|1066474_1067497_-	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_015041211.1|1067493_1068921_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010931363.1|1069858_1070875_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP010962	Bordetella pertussis strain H627 chromosome, complete genome	4107408	1074628	1135654	4107408	protease,transposase,holin,tRNA	Catovirus(20.0%)	53	NA	NA
WP_010930155.1|1074628_1075765_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_023853534.1|1075761_1076835_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_003809423.1|1076992_1078429_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_010930157.1|1078519_1079161_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023853536.1|1079496_1080513_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_019248433.1|1080845_1083593_+	pertactin autotransporter	NA	NA	NA	NA	NA
WP_010930160.1|1083659_1085081_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_003809431.1|1085344_1086061_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809432.1|1086145_1086463_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003819794.1|1086503_1086917_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_010930161.1|1086918_1087278_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853525.1|1087320_1088865_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930163.1|1088948_1089779_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_010930164.1|1089813_1090968_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930165.1|1091010_1091883_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062826528.1|1091999_1094288_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003809441.1|1095493_1095958_+	barstar family protein	NA	NA	NA	NA	NA
WP_005013747.1|1095984_1096935_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154698393.1|1096952_1097090_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930167.1|1097302_1098079_-	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_003809638.1|1098123_1098981_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930169.1|1099002_1100019_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_014486066.1|1100153_1101194_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930171.1|1101388_1103470_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_010930172.1|1103705_1105199_+	exopolyphosphatase	NA	NA	NA	NA	NA
WP_003809629.1|1105429_1106224_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003819875.1|1106444_1107803_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_010930173.1|1107799_1108642_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_010930174.1|1108660_1110547_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_162096758.1|1110488_1110740_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930175.1|1110784_1111417_-	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_003809618.1|1111435_1112038_+	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|1112189_1113140_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_161633091.1|1113720_1114428_+	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_003812707.1|1114786_1115773_-	homoserine kinase	NA	NA	NA	NA	NA
WP_010930178.1|1115912_1116926_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_005012067.1|1116922_1117873_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_155120815.1|1117890_1118031_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003812703.1|1117985_1118444_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|1118480_1119794_-	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_010930180.1|1119811_1120183_+	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_019248549.1|1120179_1121643_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930182.1|1121783_1122512_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010930183.1|1122493_1125343_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010929591.1|1125555_1126506_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930184.1|1126673_1127498_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010930185.1|1127497_1128376_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930186.1|1129280_1130396_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_020699602.1|1130424_1131219_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.3	1.2e-11
WP_010930188.1|1131215_1133081_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_003812436.1|1133159_1133792_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930189.1|1133788_1134091_-	membrane protein	NA	NA	NA	NA	NA
WP_010930190.1|1134133_1135654_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
>prophage 11
NZ_CP010962	Bordetella pertussis strain H627 chromosome, complete genome	4107408	1157572	1219742	4107408	transposase,tRNA	Erysipelothrix_phage(33.33%)	50	NA	NA
WP_010930198.1|1157572_1158523_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248935.1|1158621_1159245_-	serotype 2 fimbrial subunit	NA	NA	NA	NA	NA
WP_010930200.1|1159418_1161701_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930201.1|1161855_1164552_-	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930202.1|1164677_1165166_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813631.1|1167576_1170447_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930204.1|1170492_1171707_+	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813626.1|1171936_1173364_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_023853245.1|1173461_1174553_+	cell division protein ZapE	NA	NA	NA	NA	NA
WP_010930206.1|1174565_1175324_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003813621.1|1175411_1176314_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|1176310_1177261_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930207.1|1177390_1178374_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813618.1|1178428_1179151_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930211.1|1180629_1181985_+|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930212.1|1182065_1184441_-	RNA-binding transcriptional accessory protein Tex	NA	NA	NA	NA	NA
WP_010930213.1|1184605_1186681_+	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	30.0	2.4e-75
WP_003813594.1|1186742_1187543_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_010930214.1|1187644_1188607_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_019247742.1|1188594_1189350_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
WP_010930216.1|1189457_1191095_+	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA	NA
WP_003813586.1|1191162_1191900_+	acetoacetyl-CoA reductase	NA	NA	NA	NA	NA
WP_003813585.1|1192002_1192578_+	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA	NA
WP_010930217.1|1192750_1193287_+	iron transporter	NA	NA	NA	NA	NA
WP_003813580.1|1193289_1193634_+	cupredoxin domain-containing protein	NA	NA	NA	NA	NA
WP_010930218.1|1193649_1194495_+	FTR1 family protein	NA	NA	NA	NA	NA
WP_003821443.1|1194533_1195913_+	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_003813574.1|1195990_1196872_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_010929956.1|1196970_1197921_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811632.1|1197917_1198328_-	VOC family protein	NA	NA	NA	NA	NA
WP_010930219.1|1198435_1199290_-	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_003811636.1|1199282_1200245_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930220.1|1200290_1201415_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	28.3	1.5e-31
WP_019247966.1|1201520_1202399_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930222.1|1202523_1203303_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930223.1|1203455_1204877_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930224.1|1205311_1207009_+	sodium:solute symporter family protein	NA	NA	NA	NA	NA
WP_010930225.1|1207235_1208177_-	LD-carboxypeptidase	NA	NA	NA	NA	NA
WP_010930226.1|1208503_1209250_+	aldolase	NA	NA	NA	NA	NA
WP_033446252.1|1209257_1210184_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930228.1|1210305_1211223_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003811660.1|1211262_1212216_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811662.1|1212240_1212819_+	amino acid synthesis family protein	NA	NA	NA	NA	NA
WP_010930229.1|1214492_1215101_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930230.1|1215178_1215532_-	NirD/YgiW/YdeI family stress tolerance protein	NA	NA	NA	NA	NA
WP_010930231.1|1215615_1216605_-	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_023852977.1|1216601_1216790_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076879566.1|1216807_1217758_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|1217844_1218795_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931070.1|1218791_1219742_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP010962	Bordetella pertussis strain H627 chromosome, complete genome	4107408	1270670	1327879	4107408	transposase	Klosneuvirus(16.67%)	49	NA	NA
WP_010931070.1|1270670_1271621_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931041.1|1275367_1275979_-	DUF2239 family protein	NA	NA	NA	NA	NA
WP_003812368.1|1276201_1277662_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.3	1.6e-97
WP_010931040.1|1277758_1279351_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	33.3	1.0e-17
WP_019247974.1|1279704_1279962_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003816876.1|1279963_1281304_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010931038.1|1281399_1282089_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247976.1|1282101_1283532_+	MFS transporter	NA	NA	NA	NA	NA
WP_014905903.1|1285256_1286078_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931036.1|1286088_1287660_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931035.1|1287688_1288666_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931034.1|1288692_1289496_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.2	2.7e-30
WP_010931033.1|1289492_1290287_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003816890.1|1290294_1291530_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_010931032.1|1291522_1291957_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|1292706_1293657_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931031.1|1294278_1296006_-	sulfate permease	NA	NA	NA	NA	NA
WP_010931030.1|1296117_1297476_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_023853289.1|1297532_1297751_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1297768_1298719_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931029.1|1298759_1299830_+	FUSC family protein	NA	NA	NA	NA	NA
WP_010931028.1|1299852_1300731_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931027.1|1300902_1301874_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931026.1|1302036_1302879_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931025.1|1303040_1303721_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931024.1|1303714_1304884_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931023.1|1304880_1305912_+	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
WP_010931022.1|1305955_1307197_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931020.1|1308843_1309467_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_010931019.1|1309497_1310109_+	LysE family translocator	NA	NA	NA	NA	NA
WP_010931018.1|1310144_1310615_+	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_033456131.1|1310804_1311038_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248147.1|1311045_1312050_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931017.1|1312086_1313601_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931016.1|1313604_1314564_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931015.1|1314592_1315396_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931014.1|1315397_1317032_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
WP_010931013.1|1317115_1318177_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_004567322.1|1318375_1318645_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931012.1|1318648_1319173_+	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
WP_010929591.1|1319588_1320539_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931011.1|1320535_1321570_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_003816758.1|1321678_1322317_+	DedA family protein	NA	NA	NA	NA	NA
WP_019247724.1|1322611_1322839_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003820420.1|1322961_1323675_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_005013747.1|1323919_1324870_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931009.1|1324973_1325255_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931008.1|1325369_1326818_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_005012808.1|1326928_1327879_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP010962	Bordetella pertussis strain H627 chromosome, complete genome	4107408	1418111	1470263	4107408	transposase,tRNA	Salmonella_phage(25.0%)	45	NA	NA
WP_005013747.1|1418111_1419062_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023999730.1|1419079_1419232_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814065.1|1419228_1419582_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814063.1|1419594_1419957_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814061.1|1419998_1420424_-	DUF1841 family protein	NA	NA	NA	NA	NA
WP_003814059.1|1420626_1421883_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
WP_003814057.1|1422081_1423062_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015028.1|1423211_1424453_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1424551_1425502_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814052.1|1425510_1426206_-	two-component system response regulator KdpE	NA	NA	NA	NA	NA
WP_003814050.1|1429027_1429627_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_010930950.1|1429637_1431803_-	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
WP_010930949.1|1431826_1433611_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_017685545.1|1433610_1433700_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_003814042.1|1434394_1434667_+	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
WP_003814040.1|1434666_1436733_+	cation acetate symporter	NA	NA	NA	NA	NA
WP_010929577.1|1436729_1437680_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1437778_1438729_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015014.1|1438844_1439177_-	multidrug transporter	NA	NA	NA	NA	NA
WP_010930948.1|1439845_1440805_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
WP_003814032.1|1440846_1443207_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
WP_010930946.1|1443206_1443839_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_010930945.1|1443940_1445281_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
WP_010930944.1|1445327_1446683_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
WP_170954289.1|1446808_1447453_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814024.1|1447397_1447715_-	virulence factor	NA	NA	NA	NA	NA
WP_003814023.1|1447987_1448503_-	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
WP_003814022.1|1448596_1448758_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814021.1|1448773_1449529_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_019247690.1|1449867_1450074_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814020.1|1450081_1450741_-	NAAT family transporter	NA	NA	NA	NA	NA
WP_010930941.1|1451035_1453240_-	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA	NA
WP_010930940.1|1453350_1454574_-	alcaligin siderophore export MFS transporter Bcr	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
WP_003814017.1|1454696_1455671_-	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA	NA
WP_005013753.1|1455738_1456932_-	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA	NA
WP_003814016.1|1456946_1457747_-	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA	NA
WP_010930939.1|1457743_1459600_-	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA	NA
WP_003814014.1|1459596_1460202_-	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA	NA
WP_003814013.1|1460220_1461606_-	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_003814012.1|1462331_1463558_+	cation:proton antiporter	NA	NA	NA	NA	NA
WP_003814011.1|1463646_1464429_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|1464527_1465478_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814010.1|1465504_1466278_+	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_003814009.1|1466289_1467531_+	MFS transporter	NA	NA	NA	NA	NA
WP_076879548.1|1469312_1470263_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP010962	Bordetella pertussis strain H627 chromosome, complete genome	4107408	1514187	1582272	4107408	transposase,tRNA	Streptococcus_virus(11.11%)	58	NA	NA
WP_010930416.1|1514187_1514676_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_019248504.1|1514793_1515372_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010930418.1|1515477_1515846_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|1515944_1516895_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994932.1|1516901_1518014_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_010930419.1|1518700_1519903_+	MFS transporter	NA	NA	NA	NA	NA
WP_004568212.1|1519938_1520085_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930420.1|1520106_1522767_+	PD-(D/E)XK nuclease family protein	NA	NA	NA	NA	NA
WP_010930421.1|1522779_1526184_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_023995689.1|1526851_1529077_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
WP_010930423.1|1529123_1529450_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_010930424.1|1529500_1530109_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_005013747.1|1530207_1531158_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930425.1|1531227_1531992_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930426.1|1531988_1532588_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930427.1|1532691_1533543_-	neutral zinc metallopeptidase	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
WP_010928449.1|1533602_1534229_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_005012067.1|1534225_1535176_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019249265.1|1535274_1536387_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_019248041.1|1536376_1537378_-	imelysin family protein	NA	NA	NA	NA	NA
WP_019247498.1|1537483_1538995_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_023853587.1|1538991_1540296_-	imelysin	NA	NA	NA	NA	NA
WP_010930431.1|1540407_1540968_-	membrane protein	NA	NA	NA	NA	NA
WP_010930432.1|1541235_1541790_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
WP_010930433.1|1542245_1542461_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_033446228.1|1542715_1545313_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
WP_010930435.1|1545309_1546497_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010930436.1|1547155_1547770_+	serotype 3 fimbrial subunit	NA	NA	NA	NA	NA
WP_010930437.1|1547858_1548986_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_033446216.1|1548997_1549903_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_005012067.1|1550795_1551746_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930439.1|1551927_1552680_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_003811112.1|1552748_1553408_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_003811113.1|1553404_1554133_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
WP_010930440.1|1554145_1556425_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
WP_010930441.1|1556449_1556653_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_010930442.1|1556694_1557327_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	2.4e-13
WP_010930443.1|1557462_1558380_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_003811135.1|1559326_1560097_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003811137.1|1560101_1560701_-	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
WP_003811138.1|1560945_1562436_+	AMP nucleosidase	NA	NA	NA	NA	NA
WP_010926696.1|1562494_1562779_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930445.1|1562916_1563072_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811148.1|1563344_1564271_-	YicC family protein	NA	NA	NA	NA	NA
WP_003811149.1|1564407_1565148_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_010930446.1|1565314_1566691_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003811152.1|1566872_1567778_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930448.1|1569429_1571232_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010930449.1|1571358_1572000_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_005012808.1|1572098_1573049_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930450.1|1573070_1574291_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_003811164.1|1574476_1575889_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_003811167.1|1575952_1577020_+	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_010930451.1|1577019_1578507_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_010930452.1|1578516_1579461_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811176.1|1579620_1580319_+	pirin family protein	NA	NA	NA	NA	NA
WP_010930453.1|1580396_1581302_+	pirin family protein	NA	NA	NA	NA	NA
WP_005012067.1|1581321_1582272_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP010962	Bordetella pertussis strain H627 chromosome, complete genome	4107408	1618221	1673812	4107408	transposase	Brazilian_cedratvirus(25.0%)	47	NA	NA
WP_005013747.1|1618221_1619172_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930486.1|1619230_1620004_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486074.1|1619996_1621553_+	LTA synthase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1621549_1622500_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810741.1|1623826_1624429_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810743.1|1624668_1625370_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003816696.1|1625363_1626146_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_005012808.1|1626330_1627281_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930483.1|1627379_1628117_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010926609.1|1628306_1629065_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930482.1|1629111_1630101_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930481.1|1630278_1631247_-	transporter	NA	NA	NA	NA	NA
WP_010930480.1|1632786_1633755_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930479.1|1633763_1634705_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|1635178_1636189_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930477.1|1636179_1637694_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930476.1|1637690_1639037_+	BatD family protein	NA	NA	NA	NA	NA
WP_010930475.1|1639039_1640074_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_023852967.1|1640123_1641749_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_005012067.1|1642301_1643252_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930487.1|1643356_1644304_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247865.1|1644357_1646172_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010930489.1|1646164_1646839_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023995112.1|1646968_1650043_+	autotransporter SphB2	NA	NA	NA	NA	NA
WP_019247905.1|1650056_1650356_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930492.1|1650670_1651294_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_010930493.1|1651537_1652407_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010930494.1|1652384_1653329_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247909.1|1653414_1654341_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247910.1|1654453_1655233_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930497.1|1655223_1656420_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010930498.1|1656450_1657401_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_010930499.1|1657622_1658312_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930500.1|1658376_1659132_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930501.1|1659183_1660176_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930502.1|1660185_1661139_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811538.1|1661254_1662217_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249376.1|1663618_1664047_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1664043_1664994_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_170954298.1|1665287_1666025_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_010930504.1|1666448_1667636_-	MFS transporter	NA	NA	NA	NA	NA
WP_019249653.1|1667639_1668020_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930506.1|1669739_1670711_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930507.1|1670724_1671438_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930508.1|1671442_1672360_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811452.1|1672466_1672763_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929588.1|1672861_1673812_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP010962	Bordetella pertussis strain H627 chromosome, complete genome	4107408	1906574	2038166	4107408	transposase,tRNA	uncultured_Caudovirales_phage(16.67%)	111	NA	NA
WP_003818515.1|1906574_1909232_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	39.0	3.3e-173
WP_010930709.1|1909309_1910512_-	MFS transporter	NA	NA	NA	NA	NA
WP_003810260.1|1910508_1911021_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247822.1|1911143_1911581_-	HU family DNA-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|1911857_1912808_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_062826579.1|1912906_1913857_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930710.1|1914110_1915916_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.2e-19
WP_010930711.1|1916029_1916197_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_003810297.1|1916260_1916497_-	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_010930712.1|1916865_1918065_-	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_010929591.1|1919580_1920531_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818523.1|1920982_1921984_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810306.1|1922156_1923014_+	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003810308.1|1923010_1924273_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003818524.1|1924373_1924748_+	tautomerase family protein	NA	NA	NA	NA	NA
WP_010930713.1|1924820_1926008_+	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_010930714.1|1926092_1926863_+	spermidine synthase	NA	NA	NA	NA	NA
WP_010930715.1|1926976_1927741_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930716.1|1927691_1928993_+	malonyl-CoA decarboxylase family protein	NA	NA	NA	NA	NA
WP_010930717.1|1928989_1929796_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003818532.1|1931540_1932512_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818533.1|1932668_1933181_+	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_010930718.1|1933339_1934314_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930719.1|1935314_1936109_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_003818535.1|1936134_1936941_-	TOBE domain-containing protein	NA	NA	NA	NA	NA
WP_003810329.1|1937051_1937642_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|1937652_1938831_+	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_010930721.1|1938933_1939308_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_019248531.1|1939560_1940892_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_019247651.1|1940958_1944189_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_003810344.1|1945679_1946426_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_010930724.1|1946510_1946972_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_010930725.1|1947009_1948068_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930726.1|1948030_1949860_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_003810356.1|1949899_1950472_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930727.1|1951896_1952718_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	4.1e-42
WP_010930728.1|1953036_1954359_+	isocitrate lyase	NA	NA	NA	NA	NA
WP_010930729.1|1954718_1955354_+	membrane protein	NA	NA	NA	NA	NA
WP_010930730.1|1955313_1956264_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930731.1|1957134_1958007_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930732.1|1958084_1959224_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930733.1|1959582_1960839_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_003816691.1|1960844_1961372_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_003816690.1|1961376_1962195_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816687.1|1962194_1962917_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930735.1|1962938_1963253_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930736.1|1963270_1964419_+	CoA transferase	NA	NA	NA	NA	NA
WP_010930737.1|1964449_1965325_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816680.1|1965321_1966641_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_014486081.1|1966713_1967910_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_010930739.1|1967920_1969408_-	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_010930740.1|1972002_1972902_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852887.1|1973039_1974005_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005015810.1|1974103_1975054_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015810.1|1975152_1976103_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1976324_1977275_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812024.1|1977271_1977574_-	SelT/SelW/SelH family protein	NA	NA	NA	NA	NA
WP_003812026.1|1977733_1978138_+	group III truncated hemoglobin	NA	NA	NA	NA	NA
WP_010930743.1|1978130_1979357_+	NnrS family protein	NA	NA	NA	NA	NA
WP_003812030.1|1979353_1979800_+	membrane protein	NA	NA	NA	NA	NA
WP_003812032.1|1979869_1980652_+	exodeoxyribonuclease III	NA	NA	NA	NA	NA
WP_010930744.1|1980693_1982199_+	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010930745.1|1984754_1985576_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930746.1|1985594_1986449_-	polysaccharide deacetylase	NA	NA	NA	NA	NA
WP_003812044.1|1986452_1987424_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247855.1|1988108_1988285_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|1988770_1989721_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812172.1|1990858_1991155_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247707.1|1991329_1992682_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
WP_010930153.1|1992824_1993841_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930748.1|1995820_1996834_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_010930749.1|1996920_1997826_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812179.1|1997982_1998327_+	exported protein	NA	NA	NA	NA	NA
WP_010930750.1|1998484_1998943_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_010930751.1|1998956_2001173_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_003812183.1|2001169_2002231_+	XdhC family protein	NA	NA	NA	NA	NA
WP_010930752.1|2002259_2003234_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930753.1|2003185_2004004_-	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
WP_003812191.1|2004016_2004625_-	LON peptidase substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930754.1|2004799_2005195_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930755.1|2005213_2006653_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
WP_003812199.1|2006681_2007029_+	GFA family protein	NA	NA	NA	NA	NA
WP_010929577.1|2007047_2007998_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2008650_2009601_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997035.1|2009684_2011502_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_019247659.1|2011575_2012223_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|2012235_2013165_-	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_014905663.1|2013334_2013799_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816977.1|2014046_2014727_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003816975.1|2014775_2016467_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_010930760.1|2016482_2017034_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816971.1|2017030_2017402_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930761.1|2017514_2018351_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_029443822.1|2018361_2018886_-	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|2018983_2019163_+	DUF3008 family protein	NA	NA	NA	NA	NA
WP_010930763.1|2019292_2020267_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003816964.1|2020397_2020754_+	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930764.1|2020743_2021619_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_010930765.1|2021717_2022602_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930766.1|2022623_2023919_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_003816959.1|2024867_2025518_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930767.1|2025605_2027126_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930768.1|2027383_2029249_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2030294_2031245_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268681.1|2031262_2031403_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930769.1|2032217_2032577_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_010930770.1|2032564_2034001_-	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930771.1|2033997_2034651_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930772.1|2034647_2035841_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930773.1|2035944_2037219_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_005012067.1|2037215_2038166_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP010962	Bordetella pertussis strain H627 chromosome, complete genome	4107408	2049370	2090061	4107408	transposase,protease,tRNA	Klosneuvirus(25.0%)	36	NA	NA
WP_005013747.1|2049370_2050321_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2050419_2051370_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122784.1|2051329_2051743_-	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
WP_003816708.1|2052027_2052327_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930783.1|2052736_2055019_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.2e-36
WP_010930784.1|2055704_2057735_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
WP_006218592.1|2057754_2057967_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_003810720.1|2058244_2058784_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023852902.1|2058897_2060193_-	adenylosuccinate synthase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
WP_010930786.1|2060269_2061427_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_010930787.1|2061610_2062510_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_010930788.1|2062528_2063833_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930789.1|2063798_2064905_-	GTPase HflX	NA	NA	NA	NA	NA
WP_003810707.1|2064992_2065229_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930790.1|2065367_2066438_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810703.1|2066441_2067797_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_003810701.1|2067823_2068984_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_010930791.1|2068986_2069625_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_023995843.1|2069626_2070913_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930793.1|2070971_2072267_-	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_003810693.1|2072273_2072780_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_004568542.1|2072776_2073925_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810689.1|2073952_2074378_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_010930794.1|2074700_2077583_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_023852900.1|2077675_2078431_-	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930796.1|2079196_2080546_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_076879566.1|2080644_2081595_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930048.1|2081693_2082644_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930594.1|2082717_2083191_+	RidA family protein	NA	NA	NA	NA	NA
WP_010930593.1|2083216_2084425_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_003816734.1|2084421_2085195_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_014905757.1|2085194_2085818_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_010926757.1|2085983_2086244_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_010930591.1|2086547_2087129_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004568544.1|2087195_2087450_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930590.1|2087436_2090061_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
>prophage 18
NZ_CP010962	Bordetella pertussis strain H627 chromosome, complete genome	4107408	2117844	2183392	4107408	transposase,protease,tRNA	Lake_Baikal_phage(20.0%)	58	NA	NA
WP_010929577.1|2117844_2118795_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930573.1|2118995_2119805_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_005013747.1|2119929_2120880_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930572.1|2120876_2121770_-	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_003812452.1|2121894_2122089_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_003812453.1|2122088_2122430_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_010930571.1|2122439_2124302_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	42.4	3.0e-101
WP_003812456.1|2124431_2124944_-	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA	NA
WP_003812458.1|2124946_2125270_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	52.8	6.8e-25
WP_003812460.1|2125271_2125682_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	79.0	7.5e-53
WP_010930570.1|2125719_2126931_-	IscS subfamily cysteine desulfurase	NA	NA	NA	NA	NA
WP_003812463.1|2126948_2127461_-	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA	NA
WP_010930569.1|2127676_2128168_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_010930568.1|2128420_2130457_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
WP_019247244.1|2130534_2131737_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_010930566.1|2131865_2132516_+	transcriptional repressor LexA	NA	A0A2H4JG58	uncultured_Caudovirales_phage	50.7	3.3e-10
WP_005012067.1|2134073_2135024_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247934.1|2135594_2135807_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247935.1|2135824_2136556_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812478.1|2136590_2137232_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010930565.1|2137224_2137893_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010930564.1|2140105_2140882_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930563.1|2140903_2142061_-	thiolase	NA	NA	NA	NA	NA
WP_003812491.1|2142057_2142489_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_015063637.1|2142485_2143289_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930561.1|2143302_2143704_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010930560.1|2143770_2144742_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930559.1|2144807_2146031_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247936.1|2146258_2147209_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930557.1|2147332_2149786_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
WP_010930556.1|2149974_2151279_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
WP_003812508.1|2151383_2152037_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
WP_010930555.1|2152039_2153350_-	trigger factor	NA	NA	NA	NA	NA
WP_010930554.1|2153546_2154107_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
WP_010930553.1|2154218_2154419_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
WP_003812519.1|2154764_2155331_-	DUF924 family protein	NA	NA	NA	NA	NA
WP_010930551.1|2155414_2155618_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
WP_003812524.1|2155924_2156245_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812526.1|2156286_2156568_-	membrane protein	NA	NA	NA	NA	NA
WP_010930550.1|2156642_2157899_-	autotransporter Phg	NA	NA	NA	NA	NA
WP_010930549.1|2158281_2158611_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003812536.1|2160181_2161003_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
WP_010930548.1|2161002_2162142_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
WP_019247938.1|2162148_2163045_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_010930546.1|2163041_2164967_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
WP_010926400.1|2165326_2167939_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_003812546.1|2167991_2170292_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
WP_003812548.1|2170288_2171497_-	fatty acid desaturase	NA	NA	NA	NA	NA
WP_010930545.1|2171758_2172133_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2172129_2173080_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879626.1|2173178_2175173_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
WP_010930543.1|2175232_2176198_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_010930542.1|2176187_2179049_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_062826530.1|2179092_2179557_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930540.1|2179661_2180870_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_033446178.1|2180871_2181810_-	membrane protein	NA	NA	NA	NA	NA
WP_010930538.1|2181971_2182445_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|2182441_2183392_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP010962	Bordetella pertussis strain H627 chromosome, complete genome	4107408	2477037	2535281	4107408	transposase,tRNA	Planktothrix_phage(28.57%)	54	NA	NA
WP_005012067.1|2477037_2477988_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930388.1|2478467_2479124_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
WP_010930387.1|2479138_2480806_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930386.1|2480808_2481438_-	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_014486072.1|2481649_2482744_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930384.1|2482888_2483701_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_023853502.1|2483704_2485408_-	FimV N-terminal domain protein	NA	NA	NA	NA	NA
WP_010930382.1|2485458_2486589_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930381.1|2486775_2487852_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_010930380.1|2487933_2488584_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_010930379.1|2488598_2490002_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_004567445.1|2490285_2491104_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930378.1|2491100_2491805_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.0	2.6e-13
WP_010930377.1|2492704_2493820_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_004567447.1|2493853_2494228_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930376.1|2494250_2495408_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA	NA
WP_003812666.1|2495420_2495654_-	lipoprotein	NA	NA	NA	NA	NA
WP_019247523.1|2496288_2499258_-	formate dehydrogenase subunit alpha	NA	NA	NA	NA	NA
WP_023853518.1|2499272_2499482_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248667.1|2499633_2500263_-	molecular chaperone TorD family protein	NA	NA	NA	NA	NA
WP_010930373.1|2500259_2502350_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_010930372.1|2502373_2503054_-	DUF3306 domain-containing protein	NA	NA	NA	NA	NA
WP_003820494.1|2503050_2503611_-	DUF3305 domain-containing protein	NA	NA	NA	NA	NA
WP_004567450.1|2503617_2504715_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010930371.1|2504867_2505461_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA	NA
WP_010930370.1|2505457_2506750_+	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_003812685.1|2506763_2507306_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
WP_010930369.1|2507315_2508152_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003820487.1|2508185_2509247_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	42.8	2.9e-80
WP_019247210.1|2509288_2510341_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_019247209.1|2510356_2510659_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|2510800_2511751_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268680.1|2511768_2511933_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930368.1|2511929_2513624_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003809599.1|2513620_2514706_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
WP_010930367.1|2514753_2515653_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003809593.1|2515663_2516308_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_010930366.1|2517329_2520572_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_023852833.1|2520582_2521737_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.4	3.3e-53
WP_010930364.1|2521963_2522926_+	transaldolase	NA	H6WFR1	Cyanophage	29.2	7.5e-11
WP_076879624.1|2523024_2523975_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930363.1|2524073_2525024_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930362.1|2525033_2525723_-	VIT family protein	NA	NA	NA	NA	NA
WP_003811741.1|2525782_2526220_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_062826531.1|2526265_2527159_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811746.1|2527206_2528379_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811748.1|2528375_2529530_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003811750.1|2529726_2530077_-	RnfH family protein	NA	NA	NA	NA	NA
WP_003811752.1|2530066_2530501_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_010930800.1|2530517_2531468_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811754.1|2531615_2532083_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_010930360.1|2532063_2533221_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811759.1|2533286_2534213_-	paraslipin	NA	NA	NA	NA	NA
WP_005012067.1|2534330_2535281_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP010962	Bordetella pertussis strain H627 chromosome, complete genome	4107408	2577559	2644059	4107408	transposase	uncultured_Caudovirales_phage(40.0%)	56	NA	NA
WP_005012067.1|2577559_2578510_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811850.1|2578879_2579452_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
WP_003811852.1|2579454_2580465_+	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
WP_010930335.1|2580457_2580958_+	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
WP_003811855.1|2580968_2581310_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA	NA
WP_015041547.1|2581321_2582113_+	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA	NA
WP_003811859.1|2582129_2582399_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA	NA
WP_010930333.1|2582421_2583210_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA	NA
WP_010929632.1|2583256_2584273_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_014486070.1|2584489_2585932_-	PAS domain-containing protein	NA	A0A1B0V854	Salmonella_phage	41.8	1.0e-35
WP_010930332.1|2586110_2587730_-	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.3	1.5e-08
WP_010930331.1|2587850_2589671_-	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.6	6.4e-11
WP_010930330.1|2589749_2591282_-	flagellar hook-associated protein FlgL	NA	NA	NA	NA	NA
WP_010930329.1|2591315_2592962_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
WP_010930328.1|2593031_2594054_-	flagellar assembly peptidoglycan hydrolase FlgJ	NA	A0A088F6W1	Sulfitobacter_phage	31.4	1.9e-12
WP_010930327.1|2594071_2595205_-	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA	NA
WP_010930326.1|2595207_2595897_-	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA	NA
WP_010930325.1|2595896_2596682_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
WP_003817181.1|2596725_2597490_-	flagellar basal body rod protein FlgF	NA	NA	NA	NA	NA
WP_003817180.1|2597528_2598950_-	flagellar hook-basal body complex protein	NA	NA	NA	NA	NA
WP_010930324.1|2599015_2599720_-	flagellar basal body rod modification protein FlgD	NA	NA	NA	NA	NA
WP_003817176.1|2599767_2600187_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
WP_010930323.1|2600199_2600607_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
WP_010930322.1|2600790_2601501_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
WP_003817172.1|2601627_2601918_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
WP_003817170.1|2601935_2602418_+	flagellar protein FlgN	NA	NA	NA	NA	NA
WP_010930321.1|2606923_2608078_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA	NA
WP_010931363.1|2608383_2609400_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930319.1|2609646_2610435_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003812020.1|2610501_2611182_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812022.1|2611178_2611949_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	9.8e-30
WP_010930208.1|2612047_2612998_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811401.1|2613053_2613971_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_003811400.1|2613981_2615160_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	NA	NA	NA	NA
WP_010930318.1|2615179_2616175_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811396.1|2617763_2618372_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_003811393.1|2618359_2619400_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_003811391.1|2619417_2620380_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811389.1|2620376_2621570_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930317.1|2621566_2622364_-	citryl-CoA lyase	NA	NA	NA	NA	NA
WP_014486069.1|2622389_2623376_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930316.1|2623394_2625434_-	acetate--CoA ligase family protein	NA	NA	NA	NA	NA
WP_010930315.1|2625635_2626316_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930314.1|2626329_2627241_-	CoA ester lyase	NA	NA	NA	NA	NA
WP_003811381.1|2627237_2627816_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930313.1|2627954_2628860_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930312.1|2628867_2632287_+	TM0106 family RecB-like putative nuclease	NA	NA	NA	NA	NA
WP_010930311.1|2632274_2634875_-	BP1344/BB2830 family autotransporter	NA	NA	NA	NA	NA
WP_003811375.1|2635830_2636463_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003811372.1|2636856_2637615_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_003811370.1|2637611_2638814_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010930208.1|2639001_2639952_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930310.1|2640859_2642005_+	DUF3182 family protein	NA	NA	NA	NA	NA
WP_019247449.1|2641991_2642747_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003811361.1|2642863_2643043_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930208.1|2643108_2644059_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP010962	Bordetella pertussis strain H627 chromosome, complete genome	4107408	2806615	2861132	4107408	transposase	Diachasmimorpha_longicaudata_entomopoxvirus(20.0%)	48	NA	NA
WP_023853639.1|2806615_2807566_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931071.1|2807894_2808500_+	fimbrial major subunit FimX	NA	NA	NA	NA	NA
WP_010931072.1|2808553_2809867_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
WP_003813284.1|2809941_2810412_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_010931073.1|2810411_2811200_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
WP_010931074.1|2811210_2812863_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
WP_076879566.1|2812950_2813901_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929591.1|2813999_2814950_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931075.1|2816111_2816618_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
WP_003813293.1|2816614_2817379_-	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA	NA
WP_010931076.1|2817394_2817679_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
WP_003813298.1|2817743_2818733_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
WP_010931077.1|2818904_2819834_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
WP_003813302.1|2819805_2820492_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
WP_003813303.1|2820525_2821071_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
WP_003813306.1|2821115_2822381_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003813309.1|2822377_2823280_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_019247679.1|2824461_2825406_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931079.1|2825500_2827018_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931080.1|2827059_2828688_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_003811986.1|2828795_2829677_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931081.1|2832789_2833164_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
WP_003812004.1|2833188_2833527_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931082.1|2833570_2835205_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
WP_010931083.1|2835243_2836590_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_003812010.1|2836697_2838119_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_010931084.1|2838188_2838773_-	nitroreductase	NA	NA	NA	NA	NA
WP_005012067.1|2838875_2839826_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931085.1|2839960_2841067_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010931086.1|2841077_2842175_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_010931087.1|2842319_2843525_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_010931088.1|2843531_2844053_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
WP_010931089.1|2844049_2844541_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
WP_003819740.1|2844537_2844789_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_003819741.1|2844769_2845255_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_010931090.1|2845390_2848852_+	DUF748 domain-containing protein	NA	NA	NA	NA	NA
WP_010931091.1|2848869_2849754_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_010931092.1|2849763_2850195_-	lipoprotein	NA	NA	NA	NA	NA
WP_003809348.1|2850441_2850945_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
WP_010931094.1|2851022_2852423_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931095.1|2852497_2853373_-	membrane protein	NA	NA	NA	NA	NA
WP_023853546.1|2853369_2854377_-	biotin synthase BioB	NA	NA	NA	NA	NA
WP_010931097.1|2854844_2855150_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003819753.1|2855240_2855831_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930525.1|2856021_2857038_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010931098.1|2857229_2859566_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
WP_003812014.1|2859648_2860083_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_010931070.1|2860181_2861132_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP010962	Bordetella pertussis strain H627 chromosome, complete genome	4107408	2869157	2925942	4107408	transposase,protease	uncultured_Mediterranean_phage(28.57%)	41	NA	NA
WP_005012067.1|2869157_2870108_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931105.1|2871814_2872081_-	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_003812839.1|2872788_2873127_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931107.1|2877679_2878282_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931108.1|2878378_2879668_+	MFS transporter	NA	NA	NA	NA	NA
WP_003812846.1|2879725_2880457_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931109.1|2880453_2881257_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812851.1|2881253_2882342_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|2882338_2883268_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812857.1|2883416_2884562_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930800.1|2884583_2885534_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154698391.1|2885551_2885710_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931110.1|2885864_2889686_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010931111.1|2889842_2890511_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_014905522.1|2890515_2892189_-	MCE family protein	NA	NA	NA	NA	NA
WP_003820402.1|2892207_2893527_-	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_010931114.1|2893531_2895847_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_010931115.1|2895902_2898071_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_010931116.1|2898067_2903257_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_003820400.1|2903346_2903661_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_003812875.1|2903888_2904134_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820399.1|2904228_2904747_+	DUF192 domain-containing protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_010931117.1|2904846_2906052_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_019247560.1|2906167_2907565_-	chloride channel protein	NA	NA	NA	NA	NA
WP_010931119.1|2907681_2908260_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_010931120.1|2908332_2909724_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_005012067.1|2909891_2910842_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812889.1|2911122_2911743_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_010931122.1|2911739_2912153_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_010931123.1|2912149_2913193_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_003812895.1|2913248_2913437_+	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931124.1|2913446_2914211_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_010931125.1|2914301_2914958_+	adenylate kinase	NA	NA	NA	NA	NA
WP_010931126.1|2915049_2915808_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931127.1|2915833_2917435_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931128.1|2917635_2918640_+	FecR domain-containing protein	NA	NA	NA	NA	NA
WP_003812908.1|2918740_2919004_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931129.1|2919121_2919898_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_005012067.1|2920488_2921439_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|2923822_2924935_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012808.1|2924991_2925942_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP010962	Bordetella pertussis strain H627 chromosome, complete genome	4107408	2956328	3000019	4107408	transposase	Planktothrix_phage(33.33%)	41	NA	NA
WP_005012067.1|2956328_2957279_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268686.1|2957296_2957446_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023852715.1|2957399_2958296_-	inositol monophosphatase	NA	NA	NA	NA	NA
WP_003814547.1|2960573_2962799_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_003814544.1|2962963_2964052_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_019247918.1|2964008_2964662_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931144.1|2964709_2965507_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930176.1|2966038_2966989_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247277.1|2967063_2968218_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|2968274_2969225_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814535.1|2969323_2969629_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003820797.1|2969657_2970092_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_010931147.1|2970093_2971338_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820799.1|2971334_2972045_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_033446288.1|2972059_2972971_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931149.1|2973333_2973738_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247890.1|2973734_2974193_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_019247891.1|2974199_2975108_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010931150.1|2975104_2975971_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_003814524.1|2975957_2976785_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003820806.1|2976795_2977923_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_023852748.1|2979000_2980239_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931152.1|2980280_2981543_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010931153.1|2981549_2982302_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_019248355.1|2982353_2982539_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820813.1|2982814_2983279_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_003820814.1|2983310_2983970_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_010931154.1|2984114_2986223_+	AsmA family protein	NA	NA	NA	NA	NA
WP_023852714.1|2986219_2987170_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931155.1|2987273_2987894_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931156.1|2987985_2988738_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019248356.1|2989872_2990997_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247402.1|2991042_2991411_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2991652_2992603_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247492.1|2993638_2994181_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023998107.1|2994378_2994549_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2994566_2995517_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997028.1|2995513_2996479_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815281.1|2996548_2997385_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_010931158.1|2997897_2999007_+	porin	NA	NA	NA	NA	NA
WP_005012067.1|2999068_3000019_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
NZ_CP010962	Bordetella pertussis strain H627 chromosome, complete genome	4107408	3382058	3435799	4107408	transposase	Staphylococcus_phage(33.33%)	48	NA	NA
WP_023995489.1|3382058_3383009_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931336.1|3383413_3384058_-	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_019247677.1|3384082_3384667_-	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_014905506.1|3384767_3385385_-	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_010931337.1|3385387_3387103_-	urease subunit alpha	NA	NA	NA	NA	NA
WP_010931338.1|3387099_3387408_-	urease subunit beta	NA	NA	NA	NA	NA
WP_003814828.1|3387424_3388042_-	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_010931340.1|3388086_3388389_-	urease subunit gamma	NA	NA	NA	NA	NA
WP_003814832.1|3388489_3389344_-	urease accessory protein UreD	NA	NA	NA	NA	NA
WP_124740609.1|3389531_3389756_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929281.1|3389925_3390198_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010929282.1|3390615_3391023_-	GFA family protein	NA	NA	NA	NA	NA
WP_010931341.1|3391392_3392187_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010927102.1|3392287_3393523_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003814852.1|3393591_3394608_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931342.1|3394619_3395996_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814856.1|3395992_3397189_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814858.1|3397185_3398724_-	SpoVR family protein	NA	NA	NA	NA	NA
WP_010931343.1|3398720_3399980_-	YeaH/YhbH family protein	NA	NA	NA	NA	NA
WP_005012067.1|3401920_3402871_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931344.1|3403637_3404732_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247312.1|3404724_3406059_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_003808193.1|3406012_3406696_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003808195.1|3406721_3407885_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_004566224.1|3407881_3408883_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931346.1|3408882_3409755_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931347.1|3409751_3410501_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931348.1|3410497_3411289_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931349.1|3411285_3412425_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_047122778.1|3412700_3413486_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486103.1|3413519_3414302_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010931351.1|3414305_3414695_+	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_010931352.1|3415834_3416698_+	MaoC family dehydratase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931353.1|3416733_3417822_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|3417818_3418769_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247959.1|3419122_3422101_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003818344.1|3423027_3423906_+	fatty acid desaturase	NA	NA	NA	NA	NA
WP_005013747.1|3425854_3426805_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931354.1|3426801_3427269_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_010931355.1|3427311_3428082_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010927090.1|3428102_3428903_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931356.1|3428913_3430323_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_003814739.1|3430417_3431203_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931561.1|3431442_3432459_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814742.1|3432566_3432959_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931357.1|3433096_3433777_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_023994844.1|3433781_3434753_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930179.1|3434848_3435799_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP010962	Bordetella pertussis strain H627 chromosome, complete genome	4107408	3441954	3501254	4107408	transposase,tRNA	Acinetobacter_phage(27.27%)	48	NA	NA
WP_003820957.1|3441954_3443718_+|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931362.1|3443829_3444708_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003814250.1|3444820_3445636_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_003814252.1|3445639_3445891_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_010929632.1|3445975_3446992_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814254.1|3447322_3447544_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_019247693.1|3449904_3450822_-	DMT family transporter	NA	NA	NA	NA	NA
WP_019247692.1|3451319_3452528_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931365.1|3452607_3454179_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814275.1|3454296_3455232_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_003814277.1|3455420_3456365_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814283.1|3456932_3462650_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_010931367.1|3462655_3463783_+	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814287.1|3463838_3464465_+	aminotransferase class IV	NA	NA	NA	NA	NA
WP_010931363.1|3464736_3465753_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010927020.1|3465848_3466559_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931368.1|3466555_3467545_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931369.1|3467640_3469272_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931370.1|3469274_3470012_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247745.1|3470167_3471040_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_003814298.1|3471308_3472529_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814300.1|3472525_3473185_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814302.1|3473256_3473889_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010931372.1|3473918_3474437_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_010931373.1|3474447_3475557_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814312.1|3475603_3476458_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931374.1|3476459_3477362_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3478584_3479535_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997720.1|3481291_3482281_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247413.1|3482277_3482436_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931375.1|3482456_3483245_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_003817833.1|3483241_3484273_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_003815390.1|3484291_3484855_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_010931376.1|3484910_3486431_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_010931377.1|3486694_3487399_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_003815384.1|3487406_3488144_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_003815381.1|3488249_3488624_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815379.1|3488666_3489956_+	murein transglycosylase A	NA	NA	NA	NA	NA
WP_010931378.1|3489952_3491122_+	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_010931379.1|3491118_3491958_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931380.1|3492017_3492953_+	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_005012067.1|3492965_3493916_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931381.1|3494014_3494977_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_003817821.1|3495008_3495368_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931382.1|3495492_3496395_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_010931383.1|3496396_3498169_-	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_003815367.1|3498203_3498980_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_023852617.1|3500303_3501254_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 27
NZ_CP010962	Bordetella pertussis strain H627 chromosome, complete genome	4107408	3516192	3574265	4107408	transposase,tRNA	Planktothrix_phage(12.5%)	47	NA	NA
WP_005012808.1|3516192_3517143_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931392.1|3517271_3518405_-	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931393.1|3518448_3519354_-	hydrolase	NA	NA	NA	NA	NA
WP_023852622.1|3519356_3521057_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
WP_010931394.1|3521053_3521974_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003817805.1|3521981_3522959_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931395.1|3523017_3524052_-	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_003815317.1|3526026_3526263_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023995266.1|3526389_3527253_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_003815315.1|3527341_3528163_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003815313.1|3528242_3528980_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931397.1|3528976_3529969_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_003817794.1|3530082_3530745_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931399.1|3530789_3531938_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010931400.1|3534261_3535212_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486105.1|3535552_3536503_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3536601_3537552_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443756.1|3537848_3538346_+	cupredoxin family protein	NA	NA	NA	NA	NA
WP_010931403.1|3538388_3540164_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_010931404.1|3540171_3541038_+	copper resistance protein B	NA	NA	NA	NA	NA
WP_019249391.1|3541044_3541779_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931406.1|3542948_3543743_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815296.1|3544032_3544623_+	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931407.1|3544656_3545985_-	amidase	NA	NA	NA	NA	NA
WP_010931408.1|3546059_3547205_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014905478.1|3547316_3548315_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446233.1|3548277_3548712_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_010929974.1|3550228_3551113_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929973.1|3551109_3552315_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929972.1|3552311_3553172_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_003807038.1|3553284_3555075_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_003807035.1|3555115_3555781_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	6.7e-11
WP_010929971.1|3555781_3556090_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929970.1|3556255_3557542_-	putative Na+/H+ antiporter	NA	NA	NA	NA	NA
WP_010929969.1|3558975_3559926_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929968.1|3561877_3563092_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_003815171.1|3563197_3564187_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_003815172.1|3564183_3564792_+	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_010929967.1|3564804_3565434_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815175.1|3565430_3566051_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_003815177.1|3566082_3566874_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_010929966.1|3567725_3568181_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_010929965.1|3568199_3569126_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929964.1|3569179_3570466_-	cytochrome c	NA	NA	NA	NA	NA
WP_003815183.1|3571396_3572269_+	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929963.1|3572265_3573216_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_005012067.1|3573314_3574265_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 29
NZ_CP010962	Bordetella pertussis strain H627 chromosome, complete genome	4107408	4029579	4083011	4107408	transposase	Planktothrix_phage(40.0%)	46	NA	NA
WP_010931661.1|4029579_4030530_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931662.1|4030699_4031926_+	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA	NA
WP_010931663.1|4032125_4032992_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_003815027.1|4032984_4033947_+	Nudix family hydrolase	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
WP_010927663.1|4034047_4034998_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|4035096_4036047_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|4036145_4037096_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994937.1|4037092_4038586_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_003815032.1|4038582_4041690_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931665.1|4041686_4044755_-	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931666.1|4044751_4046002_-	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_003815038.1|4046182_4046944_-	cell division protein ZapD	NA	NA	NA	NA	NA
WP_019247320.1|4046976_4047627_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_003820519.1|4047629_4048469_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_003815047.1|4048709_4049453_+	copper resistance protein NlpE N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_003815049.1|4049535_4049883_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815051.1|4049980_4050823_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_003815053.1|4050867_4051755_-	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_003815055.1|4051781_4051970_-	DUF3460 family protein	NA	NA	NA	NA	NA
WP_010931669.1|4052067_4053525_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010931670.1|4053511_4055038_+	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_003815061.1|4055056_4055524_-	CopD family protein	NA	NA	NA	NA	NA
WP_010931671.1|4055523_4056546_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_169507388.1|4056666_4057386_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.9	4.7e-34
WP_003815066.1|4057461_4058562_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815068.1|4058563_4059754_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815070.1|4059873_4060890_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
WP_003815073.1|4061208_4061880_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
WP_010927126.1|4061876_4062785_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_010931672.1|4062996_4063644_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
WP_010931673.1|4067495_4068572_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_003815084.1|4068582_4069392_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815086.1|4069481_4070255_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_023853189.1|4070255_4070420_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930363.1|4070437_4071388_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077274100.1|4071276_4072299_+	CoA transferase	NA	NA	NA	NA	NA
WP_010931674.1|4072288_4073443_+	CoA transferase	NA	NA	NA	NA	NA
WP_010931675.1|4073482_4074895_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_019247370.1|4075019_4075886_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931677.1|4075887_4076712_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_023853488.1|4076708_4077470_+	nitroreductase	NA	M1I6Q5	Acanthocystis_turfacea_Chlorella_virus	31.0	2.0e-19
WP_003808010.1|4077550_4078237_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931679.1|4078410_4079418_+	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA	NA
WP_003819309.1|4079414_4080194_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931680.1|4080251_4081514_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929591.1|4082060_4083011_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
