The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	27282	70036	4107534	transposase,tRNA	Synechococcus_phage(50.0%)	41	NA	NA
WP_010930363.1|27282_28233_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_019247164.1|29141_30359_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|32214_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|34625_35576_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|37012_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41318_42212_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_010929588.1|43663_44614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|45200_45749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45720_45957_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46084_46978_+	AEC family transporter	NA	NA	NA	NA	NA
WP_010929590.1|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|50141_51092_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|51134_52391_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|54362_54953_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|54977_55667_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|57497_58448_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|59248_60475_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_047122776.1|60474_60888_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|61077_62019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248755.1|62442_63417_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929599.1|63473_64055_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010929600.1|64067_64370_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|64488_65547_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|65581_66853_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|67482_68664_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929584.1|69085_70036_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	232665	307009	4107534	transposase	uncultured_Mediterranean_phage(15.38%)	54	NA	NA
WP_010929591.1|232665_233616_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931563.1|233612_234803_-	voltage-gated potassium channel protein	NA	NA	NA	NA	NA
WP_010931562.1|234924_235689_-	phytanoyl-CoA dioxygenase family protein	NA	NA	NA	NA	NA
WP_003807735.1|235775_236879_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_010931561.1|237070_238087_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815102.1|238368_238857_+	D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase	NA	A0A1B1IUK5	uncultured_Mediterranean_phage	34.1	1.6e-17
WP_003817656.1|240200_240881_-	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	34.8	3.5e-15
WP_010931560.1|240942_241794_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_010931559.1|241790_242588_-	thiazole synthase	NA	NA	NA	NA	NA
WP_010931558.1|242691_243585_-	cobalamin-binding protein	NA	NA	NA	NA	NA
WP_010931557.1|243596_245486_-	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	30.8	7.6e-07
WP_010931556.1|245822_249596_+	methionine synthase	NA	A0A140XBC7	Dickeya_phage	50.8	8.6e-10
WP_010929591.1|249592_250543_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929826.1|250851_251544_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	41.6	6.3e-36
WP_003818232.1|251917_252418_-	SET domain-containing protein-lysine N-methyltransferase	NA	NA	NA	NA	NA
WP_023853391.1|252524_253445_+	bestrophin	NA	NA	NA	NA	NA
WP_010929823.1|253461_253938_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929822.1|254031_255882_+	biosynthetic-type acetolactate synthase large subunit	NA	E4WLQ6	Ostreococcus_tauri_virus	30.4	2.2e-59
WP_010929821.1|255937_256696_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929820.1|256723_258157_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003818225.1|258230_259010_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929819.1|259022_259856_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_020699616.1|259864_260635_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.9	8.1e-24
WP_010929818.1|260634_261699_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929817.1|261850_264478_-	DNA topoisomerase III	NA	A0A0G2YA05	Acanthamoeba_polyphaga_mimivirus	25.4	6.1e-23
WP_010929816.1|264541_267163_+	GDYXXLXY domain-containing protein	NA	NA	NA	NA	NA
WP_003815964.1|268090_268549_-	DUF494 domain-containing protein	NA	NA	NA	NA	NA
WP_010929815.1|268827_271071_-	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA	NA
WP_010929814.1|271267_273292_-	TRAP transporter permease	NA	NA	NA	NA	NA
WP_010929813.1|273415_274378_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010929812.1|274589_275729_+	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010929811.1|275751_276717_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_004565905.1|276912_278103_+	acetylornithine transaminase	NA	A0A1V0SKB7	Klosneuvirus	26.7	4.4e-21
WP_003815955.1|278116_278362_+	DUF1653 domain-containing protein	NA	NA	NA	NA	NA
WP_010929810.1|278390_280412_-	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	NA	NA	NA	NA	NA
WP_003815953.1|280458_282066_-	methylcrotonoyl-CoA carboxylase	NA	A0A1B2ITV7	Pike_perch_iridovirus	57.3	5.4e-22
WP_010929808.1|282166_283336_-	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|286217_287168_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929807.1|287191_288250_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_003818201.1|288324_288699_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|289253_290204_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929833.1|291760_292606_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929834.1|292693_293857_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010929835.1|294275_295247_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929836.1|295285_296713_-	amidase	NA	NA	NA	NA	NA
WP_023853625.1|296832_297624_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929838.1|297742_300196_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	34.8	2.3e-112
WP_010929839.1|300290_301400_-	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	32.6	1.2e-41
WP_010929554.1|301402_302812_-	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
WP_003816025.1|303217_303352_+	50S ribosomal protein L34	NA	NA	NA	NA	NA
WP_003816026.1|303447_303819_+	ribonuclease P protein component	NA	NA	NA	NA	NA
WP_003816027.1|303815_304088_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	52.2	7.0e-15
WP_010927254.1|304136_305828_+	membrane protein insertase YidC	NA	NA	NA	NA	NA
WP_005012067.1|306058_307009_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	489371	607266	4107534	transposase,tRNA	Acinetobacter_phage(22.22%)	102	NA	NA
WP_005012067.1|489371_490322_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929956.1|490420_491371_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929957.1|492093_493368_+|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_003807618.1|493454_494537_+	peptide chain release factor 1	NA	A0A0S4KWG0	Pseudomonas_phage	40.7	3.3e-07
WP_010929958.1|494547_495360_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_010929959.1|495396_495723_+	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA	NA
WP_003807624.1|495727_496288_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA	NA
WP_003819054.1|496528_497521_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929960.1|497539_498535_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_023853194.1|498550_499927_+	FAD binding domain-containing protein	NA	A0A0P0IVM8	Acinetobacter_phage	37.3	2.4e-18
WP_010929962.1|499919_502301_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_019247263.1|502317_502707_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_020699695.1|502833_503064_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|503168_504119_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929963.1|504217_505168_-	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_003815183.1|505164_506037_-	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929964.1|506967_508254_+	cytochrome c	NA	NA	NA	NA	NA
WP_010929965.1|508307_509234_-	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929966.1|509252_509708_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_003815177.1|510559_511351_-	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_003815175.1|511382_512003_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_010929967.1|511999_512629_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815172.1|512641_513250_-	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_003815171.1|513246_514236_-	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_010929968.1|514341_515556_+	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_010929969.1|517507_518458_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929970.1|519891_521178_+	putative Na+/H+ antiporter	NA	NA	NA	NA	NA
WP_010929971.1|521343_521652_+	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_003807035.1|521652_522318_+	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	6.7e-11
WP_003807038.1|522358_524149_+|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_010929972.1|524261_525122_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_010929973.1|525118_526324_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929974.1|526320_527205_-	DMT family transporter	NA	NA	NA	NA	NA
WP_033446233.1|528721_529156_-	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_014905478.1|529118_530117_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931408.1|530228_531374_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931407.1|531448_532777_+	amidase	NA	NA	NA	NA	NA
WP_003815296.1|532810_533401_-	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931406.1|533690_534485_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019249391.1|535654_536389_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931404.1|536395_537262_-	copper resistance protein B	NA	NA	NA	NA	NA
WP_010931403.1|537269_539045_-	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_029443756.1|539087_539585_-	cupredoxin family protein	NA	NA	NA	NA	NA
WP_005013747.1|539881_540832_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486105.1|540930_541881_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931400.1|542221_543172_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931399.1|545495_546644_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003817794.1|546688_547351_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931397.1|547464_548457_+	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_003815313.1|548453_549191_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003815315.1|549270_550092_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931396.1|550180_551044_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_003815317.1|551170_551407_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931395.1|553381_554416_+	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_003817805.1|554474_555452_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931394.1|555459_556380_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_023852622.1|556376_558077_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
WP_010931393.1|558079_558985_+	hydrolase	NA	NA	NA	NA	NA
WP_010931392.1|559028_560162_+	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_005012808.1|560290_561241_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931391.1|561339_563409_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	37.3	2.6e-101
WP_019247688.1|563451_565554_-	primosomal protein N'	NA	NA	NA	NA	NA
WP_010931389.1|565860_566937_-	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_010931388.1|567012_567897_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815341.1|568079_568502_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA	NA
WP_010931387.1|568511_569912_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
WP_003817813.1|569954_570860_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
WP_010931386.1|570958_572500_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
WP_003815348.1|572534_573074_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA	NA
WP_010931385.1|573086_573557_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
WP_003815363.1|573694_573937_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA	NA
WP_003815364.1|574053_574935_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
WP_003815365.1|575007_575328_-	ATP synthase subunit I	NA	NA	NA	NA	NA
WP_023852617.1|576179_577130_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815367.1|578453_579230_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931383.1|579264_581037_+	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931382.1|581038_581941_-	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_003817821.1|582065_582425_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931381.1|582456_583419_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_005012067.1|583517_584468_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931380.1|584480_585416_-	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_010931379.1|585475_586315_-	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931378.1|586311_587481_-	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_003815379.1|587477_588767_-	murein transglycosylase A	NA	NA	NA	NA	NA
WP_003815381.1|588809_589184_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815384.1|589289_590027_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_010931377.1|590034_590739_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_010931376.1|591002_592523_+	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_003815390.1|592578_593142_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_003817833.1|593160_594192_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_010931375.1|594188_594977_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_019247413.1|594997_595156_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023997720.1|595152_596142_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|597898_598849_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931374.1|600071_600974_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814312.1|600975_601830_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931373.1|601876_602986_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931372.1|602996_603515_-	flavin reductase family protein	NA	NA	NA	NA	NA
WP_003814302.1|603544_604177_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_003814300.1|604248_604908_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814298.1|604904_606125_-	MFS transporter	NA	NA	NA	NA	NA
WP_019247745.1|606393_607266_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
>prophage 5
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	611680	675513	4107534	transposase,tRNA	Pandoravirus(12.5%)	47	NA	NA
WP_010931363.1|611680_612697_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814287.1|612968_613595_-	aminotransferase class IV	NA	NA	NA	NA	NA
WP_010931367.1|613650_614778_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814283.1|614783_620501_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_003814277.1|621068_622013_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814275.1|622201_623137_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_010931365.1|623254_624826_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247692.1|624905_626114_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_019247693.1|626611_627529_+	DMT family transporter	NA	NA	NA	NA	NA
WP_003814254.1|629889_630111_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_010929632.1|630441_631458_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814252.1|631542_631794_-	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_003814250.1|631797_632613_-	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_010931362.1|632725_633604_-	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003820957.1|633715_635479_-|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931361.1|635594_636935_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010927010.1|638004_639429_-	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_003814239.1|639428_640130_-	response regulator	NA	W8CYM9	Bacillus_phage	36.6	5.6e-32
WP_010930179.1|641634_642585_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994844.1|642680_643652_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931357.1|643656_644337_-	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_003814742.1|644474_644867_+	OsmC family protein	NA	NA	NA	NA	NA
WP_010931561.1|644974_645991_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814739.1|646230_647016_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931356.1|647110_648520_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|648530_649331_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931355.1|649351_650122_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010931354.1|650164_650632_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_005013747.1|650628_651579_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818344.1|653527_654406_-	fatty acid desaturase	NA	NA	NA	NA	NA
WP_019247959.1|655332_658311_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931070.1|658664_659615_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931353.1|659611_660700_-	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931352.1|660735_661599_-	MaoC family dehydratase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931351.1|662738_663128_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_014486103.1|663131_663914_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_047122778.1|663947_664733_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931349.1|665008_666148_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931348.1|666144_666936_+	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931347.1|666932_667682_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931346.1|667678_668551_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_004566224.1|668550_669552_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003808195.1|669548_670712_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003808193.1|670737_671421_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247312.1|671374_672709_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931344.1|672701_673796_+	CoA transferase	NA	NA	NA	NA	NA
WP_005012067.1|674562_675513_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	694424	771732	4107534	protease,transposase,tRNA,integrase	Bacillus_phage(20.0%)	56	741560:741578	761448:761466
WP_023995489.1|694424_695375_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931335.1|695473_696949_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931334.1|698536_699424_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931333.1|699426_700368_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931332.1|700413_701979_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931331.1|703756_705082_-	aspartate aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931330.1|705264_706722_+	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	21.1	7.6e-15
WP_003816386.1|706685_707183_-	dihydrofolate reductase	NA	A0A140HLG8	Bacillus_phage	38.9	3.0e-24
WP_010931328.1|707213_708185_-	thymidylate synthase	NA	J7KKN7	Erwinia_phage	33.3	4.8e-50
WP_003808444.1|708237_708675_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931327.1|708798_709467_+	2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase	NA	NA	NA	NA	NA
WP_003808448.1|710195_711299_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_171024626.1|711401_712679_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	NA	NA	NA	NA	NA
WP_010930472.1|712690_713716_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	NA	A0A2K9L4U8	Tupanvirus	44.2	4.7e-72
WP_010931325.1|713717_715088_+	polysaccharide biosynthesis C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931324.1|715088_716225_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010931323.1|716271_718197_+	asparagine synthase (glutamine-hydrolyzing)	NA	A0A2K9R7N5	Dishui_lake_phycodnavirus	29.0	1.0e-27
WP_010931322.1|718193_719315_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010931320.1|720461_721592_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_003808462.1|721599_723165_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_010931319.1|723171_724554_-	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	31.6	6.2e-51
WP_003808465.1|724832_725444_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931317.1|725535_726951_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_003818936.1|726968_727679_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010931316.1|727675_728998_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_010931315.1|729077_731039_+	sulfatase-like hydrolase/transferase	NA	NA	NA	NA	NA
WP_003818932.1|731164_732478_-	fumarylacetoacetase	NA	NA	NA	NA	NA
WP_003818930.1|732586_733885_-	homogentisate 1,2-dioxygenase	NA	NA	NA	NA	NA
WP_010931314.1|734067_734976_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003808487.1|734985_735195_-	DUF2783 domain-containing protein	NA	NA	NA	NA	NA
WP_003808489.1|735206_736886_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931313.1|736987_737941_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010925978.1|738031_738859_-	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	NA	NA	NA	NA
WP_010931312.1|738857_740744_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_003818921.1|740740_741340_+	lipoprotein localization protein LolB	NA	NA	NA	NA	NA
WP_010931311.1|741388_742288_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
741560:741578	attL	CTGCCTGGCGTGGCCGAGT	NA	NA	NA	NA
WP_010931310.1|742496_743447_+	ribose-phosphate pyrophosphokinase	NA	A0A2K9L8D8	Tupanvirus	35.5	7.3e-43
WP_029443719.1|743569_744184_+	50S ribosomal protein L25/general stress protein Ctc	NA	NA	NA	NA	NA
WP_010931308.1|744312_744909_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931307.1|744905_745688_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_010931306.1|745760_746852_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_010931305.1|747131_748259_+|integrase	site-specific integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	33.6	1.4e-48
WP_010931304.1|748600_749647_+	Fic family protein	NA	NA	NA	NA	NA
WP_010931303.1|749794_752914_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA	NA
WP_023994585.1|752915_755867_+	DNA methylase	NA	G8I4P9	Mycobacterium_phage	25.1	2.9e-21
WP_010931301.1|755882_757094_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010931070.1|757277_758228_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077274087.1|758244_758739_+	DUF4276 family protein	NA	NA	NA	NA	NA
WP_019247740.1|758742_759000_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248455.1|759543_760455_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_029443992.1|760536_760821_+	ATP-dependent helicase	NA	A0A1V0SIN4	Klosneuvirus	34.1	6.8e-05
WP_005012067.1|761604_762555_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
761448:761466	attR	ACTCGGCCACGCCAGGCAG	NA	NA	NA	NA
WP_019247178.1|762973_765538_-	autotransporter domain-containing protein	NA	NA	NA	NA	NA
WP_019247179.1|765582_767436_-	autotransporter-associated beta strand repeat-containing protein	NA	NA	NA	NA	NA
WP_014905963.1|767768_769340_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|770781_771732_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	1018714	1120058	4107534	transposase,tRNA	Bacillus_virus(27.27%)	92	NA	NA
WP_003813026.1|1018714_1019830_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_003813022.1|1019930_1020749_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_010931185.1|1020846_1021458_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_010931184.1|1021617_1022994_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	47.5	2.2e-109
WP_003813017.1|1023056_1023515_+	cytochrome c	NA	NA	NA	NA	NA
WP_003813013.1|1023599_1024295_-	cytochrome b/b6 domain-containing protein	NA	NA	NA	NA	NA
WP_003813010.1|1024356_1024638_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931182.1|1025200_1025953_+	DUF3053 domain-containing protein	NA	NA	NA	NA	NA
WP_003813006.1|1025997_1027074_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_005012067.1|1027070_1028021_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486100.1|1028123_1028786_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019249309.1|1028880_1029051_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247599.1|1029403_1030405_+	amidase	NA	NA	NA	NA	NA
WP_003818702.1|1030407_1031604_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486098.1|1031624_1032428_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_019247598.1|1032508_1032805_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247597.1|1032835_1033399_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014486097.1|1033439_1034297_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003818698.1|1034304_1035054_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	6.2e-29
WP_014486096.1|1035075_1035948_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_014486095.1|1035976_1036756_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486094.1|1036789_1037587_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003808978.1|1040241_1040634_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486091.1|1040627_1041488_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003818691.1|1041491_1042454_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_014486089.1|1043230_1043920_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.8	4.8e-12
WP_010930208.1|1044780_1045731_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931181.1|1046080_1046950_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010926062.1|1047020_1047716_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010931179.1|1047705_1048215_+	nucleoside deaminase	NA	NA	NA	NA	NA
WP_010931178.1|1048211_1049432_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931177.1|1049379_1050282_-	transcriptional regulator GcvA	NA	NA	NA	NA	NA
WP_023997744.1|1051168_1052455_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931176.1|1052493_1053867_+	amidase	NA	NA	NA	NA	NA
WP_010931175.1|1053905_1054607_-	riboflavin synthase	NA	NA	NA	NA	NA
WP_010931174.1|1054905_1055895_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003809010.1|1055995_1056457_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931173.1|1056472_1057021_-	cysteine dioxygenase family protein	NA	NA	NA	NA	NA
WP_010931172.1|1057162_1058638_-	acyl--CoA ligase	NA	Q75ZG1	Hepacivirus	25.6	3.0e-35
WP_010931171.1|1058743_1059835_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010931170.1|1059838_1060621_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931169.1|1060630_1061419_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.0	1.1e-33
WP_010931168.1|1062544_1062979_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010931167.1|1062975_1063986_-	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_003809025.1|1064029_1064956_-	VOC family protein	NA	NA	NA	NA	NA
WP_003809026.1|1065242_1065611_+	DUF861 domain-containing protein	NA	NA	NA	NA	NA
WP_023853143.1|1065827_1066778_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931165.1|1066822_1069249_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.8	1.2e-86
WP_010931164.1|1069297_1069990_+	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	29.9	4.7e-07
WP_010931163.1|1070062_1071262_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_003819549.1|1071279_1072185_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931162.1|1072300_1073230_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010931161.1|1073255_1074602_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931160.1|1074629_1075379_+	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	26.4	1.2e-11
WP_010931159.1|1075392_1076175_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|1076367_1077318_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931158.1|1077379_1078489_-	porin	NA	NA	NA	NA	NA
WP_003815281.1|1079001_1079838_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_023997028.1|1079907_1080873_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|1080869_1081820_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247492.1|1082205_1082748_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1083783_1084734_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247402.1|1084975_1085344_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248356.1|1085389_1086514_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931156.1|1087648_1088401_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931155.1|1088492_1089113_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852714.1|1089216_1090167_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931154.1|1090163_1092272_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003820814.1|1092416_1093076_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_003820813.1|1093107_1093572_-	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_019248355.1|1093847_1094033_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931153.1|1094084_1094837_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931152.1|1094843_1096106_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_023852748.1|1096147_1097386_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820806.1|1098463_1099591_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_003814524.1|1099601_1100429_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_010931150.1|1100415_1101282_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010931149.1|1102648_1103053_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446288.1|1103415_1104327_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003820799.1|1104341_1105052_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931147.1|1105048_1106293_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820797.1|1106294_1106729_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_003814535.1|1106757_1107063_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_005012067.1|1107161_1108112_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247277.1|1108168_1109323_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_010930176.1|1109397_1110348_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931144.1|1110879_1111677_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247918.1|1111724_1112378_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003814544.1|1112334_1113423_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_003814547.1|1113587_1115813_-	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_023852715.1|1118090_1118987_+	inositol monophosphatase	NA	NA	NA	NA	NA
WP_005012067.1|1119107_1120058_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	1150444	1221414	4107534	protease,transposase	uncultured_Mediterranean_phage(25.0%)	51	NA	NA
WP_005012808.1|1150444_1151395_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|1151451_1152564_+	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|1154947_1155898_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931129.1|1156488_1157265_+	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_003812908.1|1157382_1157646_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931128.1|1157746_1158751_-	FecR domain-containing protein	NA	NA	NA	NA	NA
WP_010931127.1|1158951_1160553_-	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931126.1|1160578_1161337_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931125.1|1161428_1162085_-	adenylate kinase	NA	NA	NA	NA	NA
WP_010931124.1|1162175_1162940_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003812895.1|1162949_1163138_-	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931123.1|1163193_1164237_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_010931122.1|1164233_1164647_-	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_003812889.1|1164643_1165264_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_005012067.1|1165544_1166495_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931120.1|1166662_1168054_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_010931119.1|1168126_1168705_+	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_019247560.1|1168821_1170219_+	chloride channel protein	NA	NA	NA	NA	NA
WP_010931117.1|1170334_1171540_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_003820399.1|1171639_1172158_-	DUF192 domain-containing protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_003812875.1|1172252_1172498_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820400.1|1172725_1173040_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_010931116.1|1173129_1178319_+	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_010931115.1|1178315_1180484_+	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_010931114.1|1180539_1182855_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_003820402.1|1182859_1184179_+	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_014905522.1|1184197_1185871_+	MCE family protein	NA	NA	NA	NA	NA
WP_010931111.1|1185875_1186544_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010931110.1|1186700_1190522_+	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930800.1|1190852_1191803_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812857.1|1191824_1192970_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|1193118_1194048_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812851.1|1194044_1195133_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_010931109.1|1195129_1195933_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812846.1|1195929_1196661_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931108.1|1196718_1198008_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931107.1|1198104_1198707_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812839.1|1203260_1203599_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931105.1|1204306_1204573_+	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_010931103.1|1207225_1208557_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931102.1|1209817_1211818_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_003819722.1|1211810_1212452_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_003809276.1|1212448_1212856_+	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_010931101.1|1212852_1213653_+	SURF1 family protein	NA	NA	NA	NA	NA
WP_010931100.1|1213727_1214432_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931099.1|1214463_1215258_+	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_005013747.1|1215254_1216205_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995489.1|1216303_1217254_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812014.1|1217352_1217787_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_010931098.1|1217869_1220206_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
WP_010930525.1|1220397_1221414_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	1262485	1344620	4107534	transposase,tRNA	Bacillus_virus(25.0%)	60	NA	NA
WP_010929591.1|1262485_1263436_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931074.1|1263523_1265176_+	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
WP_010931073.1|1265186_1265975_+	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
WP_003813284.1|1265974_1266445_+	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_010931072.1|1266519_1267833_+	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
WP_010931071.1|1267886_1268492_-	fimbrial major subunit FimX	NA	NA	NA	NA	NA
WP_010927663.1|1268808_1269759_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931070.1|1269755_1270706_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931069.1|1270966_1271995_-	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010931068.1|1272074_1273373_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_003816847.1|1273369_1273951_-	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931067.1|1274263_1278310_+	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_010931066.1|1278550_1286212_+	hemagglutinin repeat-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_005012067.1|1286208_1287159_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931065.1|1288298_1288772_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931064.1|1288911_1289532_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931063.1|1289667_1290468_+	aldolase	NA	NA	NA	NA	NA
WP_003810897.1|1290522_1291614_+	TRAP transporter substrate-binding protein DctP	NA	NA	NA	NA	NA
WP_010931062.1|1291635_1292079_-	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_010931061.1|1292107_1292740_-	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
WP_003810909.1|1292850_1293267_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931060.1|1293259_1293952_+	DUF2238 domain-containing protein	NA	NA	NA	NA	NA
WP_010931059.1|1294058_1294433_+	MAPEG family protein	NA	NA	NA	NA	NA
WP_010931058.1|1294509_1295319_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931057.1|1295414_1296359_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
WP_003816577.1|1296397_1297369_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003810921.1|1297459_1297897_-	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA	NA
WP_029443733.1|1297955_1298837_-	NRDE family protein	NA	NA	NA	NA	NA
WP_010931054.1|1299840_1300701_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931053.1|1300733_1302116_+	FAD-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	28.4	7.9e-30
WP_010931052.1|1302112_1303132_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247407.1|1303504_1303999_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931051.1|1304006_1304747_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931050.1|1304827_1306432_-	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_010931049.1|1306471_1307260_-	DeoR family transcriptional regulator	NA	A0A077SK06	Escherichia_phage	30.4	2.0e-22
WP_010931048.1|1308462_1309551_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.1	9.7e-15
WP_010931047.1|1310431_1311244_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_004568502.1|1311256_1311565_+	DUF2160 domain-containing protein	NA	NA	NA	NA	NA
WP_010931046.1|1311682_1313413_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019249399.1|1313414_1314560_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810957.1|1315478_1315946_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_019247521.1|1316081_1317464_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_014486086.1|1317460_1318585_+	DNA repair exonuclease	NA	NA	NA	NA	NA
WP_010931042.1|1318581_1321218_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010931070.1|1321633_1322584_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931041.1|1326330_1326942_-	DUF2239 family protein	NA	NA	NA	NA	NA
WP_003812368.1|1327164_1328625_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.3	1.6e-97
WP_010931040.1|1328721_1330314_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	33.3	1.0e-17
WP_019247974.1|1330667_1330925_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003816876.1|1330926_1332267_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010931038.1|1332362_1333052_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247976.1|1333064_1334495_+	MFS transporter	NA	NA	NA	NA	NA
WP_014905903.1|1336219_1337041_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931036.1|1337051_1338623_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931035.1|1338651_1339629_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931034.1|1339655_1340459_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.2	2.7e-30
WP_010931033.1|1340455_1341250_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003816890.1|1341257_1342493_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_010931032.1|1342485_1342920_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|1343669_1344620_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	1348731	1389396	4107534	transposase,tRNA	Salmonella_phage(33.33%)	41	NA	NA
WP_005013747.1|1348731_1349682_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931029.1|1349722_1350793_+	FUSC family protein	NA	NA	NA	NA	NA
WP_010931028.1|1350815_1351694_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931027.1|1351865_1352837_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931026.1|1352999_1353842_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931025.1|1354003_1354684_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931024.1|1354677_1355847_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931023.1|1355843_1356875_+	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
WP_010931022.1|1356918_1358160_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931021.1|1358194_1359727_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931020.1|1359807_1360431_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_010931019.1|1360461_1361073_+	LysE family translocator	NA	NA	NA	NA	NA
WP_010931018.1|1361108_1361579_+	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_019248147.1|1362010_1363015_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931017.1|1363051_1364566_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931016.1|1364569_1365529_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931015.1|1365557_1366361_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931014.1|1366362_1367997_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
WP_010931013.1|1368080_1369142_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_004567322.1|1369340_1369610_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931012.1|1369613_1370138_+	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
WP_010929591.1|1370553_1371504_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931011.1|1371500_1372535_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_003816758.1|1372643_1373282_+	DedA family protein	NA	NA	NA	NA	NA
WP_019247724.1|1373576_1373804_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003820420.1|1373926_1374640_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_005013747.1|1374884_1375835_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931009.1|1375938_1376220_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931008.1|1376334_1377783_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_005012808.1|1377893_1378844_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816756.1|1378840_1379290_-	dUTP diphosphatase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
WP_010929584.1|1379484_1380435_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812834.1|1380770_1380968_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_003812832.1|1380983_1381343_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_010926359.1|1381417_1382440_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.6	1.0e-26
WP_010931007.1|1382452_1384870_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_010931006.1|1384875_1385217_+	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	42.2	2.8e-13
WP_003812822.1|1385275_1385686_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931004.1|1387456_1388053_+	lipoprotein	NA	NA	NA	NA	NA
WP_004567479.1|1388152_1388335_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|1388445_1389396_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	1469073	1521226	4107534	transposase,tRNA	Salmonella_phage(25.0%)	45	NA	NA
WP_005013747.1|1469073_1470024_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814065.1|1470190_1470544_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814063.1|1470556_1470919_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814061.1|1470960_1471386_-	DUF1841 family protein	NA	NA	NA	NA	NA
WP_003814059.1|1471588_1472845_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
WP_003814057.1|1473043_1474024_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015028.1|1474173_1475415_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1475513_1476464_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814052.1|1476472_1477168_-	two-component system response regulator KdpE	NA	NA	NA	NA	NA
WP_003814050.1|1479989_1480589_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_010930950.1|1480599_1482765_-	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
WP_010930949.1|1482788_1484573_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_017685545.1|1484572_1484662_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_003814042.1|1485356_1485629_+	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
WP_003814040.1|1485628_1487695_+	cation acetate symporter	NA	NA	NA	NA	NA
WP_010929577.1|1487691_1488642_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1488740_1489691_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015014.1|1489806_1490139_-	multidrug transporter	NA	NA	NA	NA	NA
WP_010929073.1|1490135_1490822_-	Smr/MutS family protein	NA	NA	NA	NA	NA
WP_010930948.1|1490808_1491768_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
WP_003814032.1|1491809_1494170_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
WP_010930946.1|1494169_1494802_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_010930945.1|1494903_1496244_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
WP_010930944.1|1496290_1497646_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
WP_170954289.1|1497771_1498416_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814024.1|1498360_1498678_-	virulence factor	NA	NA	NA	NA	NA
WP_003814023.1|1498950_1499466_-	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
WP_003814022.1|1499559_1499721_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814021.1|1499736_1500492_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_019247690.1|1500830_1501037_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814020.1|1501044_1501704_-	NAAT family transporter	NA	NA	NA	NA	NA
WP_010930941.1|1501998_1504203_-	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA	NA
WP_010930940.1|1504313_1505537_-	alcaligin siderophore export MFS transporter Bcr	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
WP_003814017.1|1505659_1506634_-	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA	NA
WP_005013753.1|1506701_1507895_-	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA	NA
WP_003814016.1|1507909_1508710_-	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA	NA
WP_010930939.1|1508706_1510563_-	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA	NA
WP_003814014.1|1510559_1511165_-	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA	NA
WP_003814013.1|1511183_1512569_-	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_003814012.1|1513294_1514521_+	cation:proton antiporter	NA	NA	NA	NA	NA
WP_003814011.1|1514609_1515392_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|1515490_1516441_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814010.1|1516467_1517241_+	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_003814009.1|1517252_1518494_+	MFS transporter	NA	NA	NA	NA	NA
WP_076879548.1|1520275_1521226_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	1565151	1633236	4107534	transposase,tRNA	Streptococcus_virus(11.11%)	59	NA	NA
WP_010930416.1|1565151_1565640_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_019248504.1|1565757_1566336_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010930418.1|1566441_1566810_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|1566908_1567859_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994932.1|1567865_1568978_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_010930419.1|1569664_1570867_+	MFS transporter	NA	NA	NA	NA	NA
WP_004568212.1|1570902_1571049_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930420.1|1571070_1573731_+	PD-(D/E)XK nuclease family protein	NA	NA	NA	NA	NA
WP_010930421.1|1573743_1577148_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_023995689.1|1577815_1580041_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
WP_010930423.1|1580087_1580414_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_010930424.1|1580464_1581073_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_005013747.1|1581171_1582122_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930425.1|1582191_1582956_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930426.1|1582952_1583552_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930427.1|1583655_1584507_-	neutral zinc metallopeptidase	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
WP_010928449.1|1584566_1585193_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_005012067.1|1585189_1586140_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019249265.1|1586238_1587351_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_019248041.1|1587340_1588342_-	imelysin family protein	NA	NA	NA	NA	NA
WP_019247498.1|1588447_1589959_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_023853587.1|1589955_1591260_-	imelysin	NA	NA	NA	NA	NA
WP_010930431.1|1591371_1591932_-	membrane protein	NA	NA	NA	NA	NA
WP_010930432.1|1592199_1592754_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
WP_010930433.1|1593209_1593425_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_033446228.1|1593679_1596277_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
WP_010930435.1|1596273_1597461_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010930436.1|1598118_1598733_+	serotype 3 fimbrial subunit	NA	NA	NA	NA	NA
WP_010930437.1|1598821_1599949_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_033446216.1|1599960_1600866_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_005012067.1|1601758_1602709_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930439.1|1602890_1603643_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_003811112.1|1603711_1604371_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_003811113.1|1604367_1605096_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
WP_010930440.1|1605108_1607388_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
WP_010930441.1|1607412_1607616_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_010930442.1|1607657_1608290_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	2.4e-13
WP_010930443.1|1608425_1609343_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_010930444.1|1609339_1610053_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_003811135.1|1610290_1611061_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003811137.1|1611065_1611665_-	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
WP_003811138.1|1611909_1613400_+	AMP nucleosidase	NA	NA	NA	NA	NA
WP_010926696.1|1613458_1613743_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930445.1|1613880_1614036_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811148.1|1614308_1615235_-	YicC family protein	NA	NA	NA	NA	NA
WP_003811149.1|1615371_1616112_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_010930446.1|1616278_1617655_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003811152.1|1617836_1618742_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930448.1|1620393_1622196_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010930449.1|1622322_1622964_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_005012808.1|1623062_1624013_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930450.1|1624034_1625255_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_003811164.1|1625440_1626853_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_003811167.1|1626916_1627984_+	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_010930451.1|1627983_1629471_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_010930452.1|1629480_1630425_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811176.1|1630584_1631283_+	pirin family protein	NA	NA	NA	NA	NA
WP_010930453.1|1631360_1632266_+	pirin family protein	NA	NA	NA	NA	NA
WP_005012067.1|1632285_1633236_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	1669185	1724776	4107534	transposase	Brazilian_cedratvirus(25.0%)	47	NA	NA
WP_005013747.1|1669185_1670136_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930486.1|1670194_1670968_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486074.1|1670960_1672517_+	LTA synthase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1672513_1673464_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810741.1|1674790_1675393_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810743.1|1675632_1676334_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003816696.1|1676327_1677110_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_005012808.1|1677294_1678245_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930483.1|1678343_1679081_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010926609.1|1679270_1680029_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930482.1|1680075_1681065_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930481.1|1681242_1682211_-	transporter	NA	NA	NA	NA	NA
WP_010930480.1|1683750_1684719_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930479.1|1684727_1685669_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|1686142_1687153_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930477.1|1687143_1688658_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930476.1|1688654_1690001_+	BatD family protein	NA	NA	NA	NA	NA
WP_010930475.1|1690003_1691038_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_023852967.1|1691087_1692713_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_005012067.1|1693265_1694216_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930487.1|1694320_1695268_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247865.1|1695321_1697136_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010930489.1|1697128_1697803_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023995112.1|1697932_1701007_+	autotransporter SphB2	NA	NA	NA	NA	NA
WP_019247905.1|1701020_1701320_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930492.1|1701634_1702258_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_010930493.1|1702501_1703371_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010930494.1|1703348_1704293_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247909.1|1704378_1705305_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247910.1|1705417_1706197_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930497.1|1706187_1707384_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010930498.1|1707414_1708365_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_010930499.1|1708586_1709276_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930500.1|1709340_1710096_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930501.1|1710147_1711140_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930502.1|1711149_1712103_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811538.1|1712218_1713181_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249376.1|1714582_1715011_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1715007_1715958_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_170954298.1|1716251_1716989_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_010930504.1|1717412_1718600_-	MFS transporter	NA	NA	NA	NA	NA
WP_019249653.1|1718603_1718984_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930506.1|1720703_1721675_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930507.1|1721688_1722402_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930508.1|1722406_1723324_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811452.1|1723430_1723727_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929588.1|1723825_1724776_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	1746434	1838405	4107534	transposase,tRNA	Moraxella_phage(25.0%)	60	NA	NA
WP_005012067.1|1746434_1747385_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905945.1|1747483_1748434_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810867.1|1748457_1748922_-	GatB/YqeY domain-containing protein	NA	A0A0K2FLI9	Brevibacillus_phage	32.4	3.9e-05
WP_010930799.1|1749068_1750277_+	NO-inducible flavohemoprotein	NA	NA	NA	NA	NA
WP_010930798.1|1750320_1750758_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930797.1|1750876_1752166_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|1754906_1755857_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930595.1|1755955_1756972_-	folate-binding protein YgfZ	NA	NA	NA	NA	NA
WP_010930596.1|1757150_1758185_+	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
WP_003811733.1|1758181_1758808_+	dTMP kinase	NA	A0A1L2BX49	Bacteriophage	35.1	1.6e-22
WP_010930597.1|1758804_1759857_+	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
WP_010930598.1|1759906_1760677_+	TatD family hydrolase	NA	NA	NA	NA	NA
WP_010930599.1|1760727_1761564_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010930600.1|1761759_1762500_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930601.1|1762574_1763318_+	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_020699606.1|1763994_1764753_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.9	6.7e-31
WP_003811716.1|1765890_1767180_+	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA	NA
WP_010930602.1|1768790_1770038_-	Zn-dependent hydrolase	NA	NA	NA	NA	NA
WP_010930603.1|1770047_1771757_-	thiamine pyrophosphate-binding protein	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	27.3	5.9e-35
WP_003811709.1|1771753_1772692_-	citrate lyase subunit beta	NA	NA	NA	NA	NA
WP_003811706.1|1772688_1773972_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010930604.1|1773975_1774458_-	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010930605.1|1774458_1775445_-	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_003811701.1|1775617_1776337_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|1776453_1777404_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930606.1|1780589_1781939_+	amidase	NA	NA	NA	NA	NA
WP_010930607.1|1781996_1782791_+	putative hydro-lyase	NA	NA	NA	NA	NA
WP_003816497.1|1782924_1783800_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_014486076.1|1783843_1787560_-	virulence factors two-component system sensor histidine kinase BvgS	NA	A0A1V0SGX0	Hokovirus	32.0	4.2e-33
WP_010930609.1|1787568_1788198_-	virulence factors two-component system response regulator BvgA	NA	NA	NA	NA	NA
WP_010930610.1|1788624_1799397_+	filamentous hemagglutinin/adhesin	NA	A0A0R6PJK4	Moraxella_phage	32.5	3.6e-29
WP_010930611.1|1800159_1800894_+	molecular chaperone FimB	NA	NA	NA	NA	NA
WP_010930612.1|1800956_1803578_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
WP_019247160.1|1803558_1804689_+	type 1 fimbrial protein	NA	NA	NA	NA	NA
WP_010930614.1|1804681_1806436_+	filamentous hemagglutinin transporter protein FhaC	NA	NA	NA	NA	NA
WP_010930615.1|1807753_1808254_-	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010930616.1|1808260_1809235_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930617.1|1810791_1811283_-	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010930618.1|1811296_1812262_-	TRAP transporter substrate-binding protein DctP	NA	NA	NA	NA	NA
WP_019247163.1|1812282_1812984_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930620.1|1814158_1814671_+	winged helix DNA-binding protein	NA	NA	NA	NA	NA
WP_010930621.1|1814749_1818373_+	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010930622.1|1818386_1819418_-	C45 family peptidase	NA	NA	NA	NA	NA
WP_003809983.1|1820577_1821411_+	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_010930623.1|1821424_1822183_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930624.1|1822344_1823337_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930625.1|1823554_1824331_-	RNA methyltransferase	NA	NA	NA	NA	NA
WP_010930626.1|1824438_1825221_+	inositol monophosphatase	NA	NA	NA	NA	NA
WP_003809992.1|1825347_1826934_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	42.0	1.9e-35
WP_010930627.1|1826958_1827822_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_019247344.1|1828029_1828806_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA	NA
WP_003809999.1|1828798_1829308_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_010930629.1|1829436_1830120_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_010930630.1|1830359_1831820_+|tRNA	cysteine--tRNA ligase	tRNA	A0A2K9L6B7	Tupanvirus	27.9	2.5e-34
WP_003820119.1|1831839_1832484_+	DNA-3-methyladenine glycosylase 2 family protein	NA	NA	NA	NA	NA
WP_003810007.1|1832520_1833486_+	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA	NA
WP_023997643.1|1833584_1834535_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930632.1|1834664_1835630_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
WP_010930633.1|1835729_1836995_+	aspartate kinase	NA	NA	NA	NA	NA
WP_010929632.1|1837388_1838405_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	1958590	2028242	4107534	transposase,tRNA	Staphylococcus_phage(16.67%)	55	NA	NA
WP_003818515.1|1958590_1961248_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	39.0	3.3e-173
WP_010930709.1|1961325_1962528_-	MFS transporter	NA	NA	NA	NA	NA
WP_003810260.1|1962524_1963037_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247822.1|1963159_1963597_-	HU family DNA-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|1963873_1964824_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077069014.1|1964922_1965873_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930710.1|1966126_1967932_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.2e-19
WP_010930711.1|1968045_1968213_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_003810297.1|1968276_1968513_-	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_010930712.1|1968881_1970081_-	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_010929591.1|1971596_1972547_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818523.1|1972998_1974000_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810306.1|1974172_1975030_+	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003810308.1|1975026_1976289_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003818524.1|1976389_1976764_+	tautomerase family protein	NA	NA	NA	NA	NA
WP_010930713.1|1976836_1978024_+	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_010930714.1|1978108_1978879_+	spermidine synthase	NA	NA	NA	NA	NA
WP_010930715.1|1978992_1979757_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930716.1|1979707_1981009_+	malonyl-CoA decarboxylase family protein	NA	NA	NA	NA	NA
WP_010930717.1|1981005_1981812_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003818532.1|1983556_1984528_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818533.1|1984684_1985197_+	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_010930718.1|1985355_1986330_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930719.1|1987330_1988125_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_003818535.1|1988150_1988957_-	TOBE domain-containing protein	NA	NA	NA	NA	NA
WP_003810329.1|1989067_1989658_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|1989668_1990847_+	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_010930721.1|1990949_1991324_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_019248531.1|1991576_1992908_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_019247651.1|1992974_1996205_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_003810344.1|1997695_1998442_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_010930724.1|1998526_1998988_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_010930725.1|1999025_2000084_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930726.1|2000046_2001876_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_003810356.1|2001915_2002488_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930727.1|2003912_2004734_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	4.1e-42
WP_010930728.1|2005052_2006375_+	isocitrate lyase	NA	NA	NA	NA	NA
WP_010930729.1|2006734_2007370_+	membrane protein	NA	NA	NA	NA	NA
WP_010930730.1|2007329_2008280_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930731.1|2009150_2010023_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930732.1|2010100_2011240_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930733.1|2011598_2012855_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_003816691.1|2012860_2013388_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_003816690.1|2013392_2014211_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816687.1|2014210_2014933_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930735.1|2014954_2015269_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930736.1|2015286_2016435_+	CoA transferase	NA	NA	NA	NA	NA
WP_010930737.1|2016465_2017341_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816680.1|2017337_2018657_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_014486081.1|2018729_2019926_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_010930739.1|2019936_2021424_-	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_010930740.1|2024018_2024918_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852887.1|2025055_2026021_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005015810.1|2026119_2027070_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2027291_2028242_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	2039738	2089134	4107534	transposase	Erysipelothrix_phage(16.67%)	45	NA	NA
WP_005013747.1|2039738_2040689_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812172.1|2041826_2042123_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247707.1|2042297_2043650_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
WP_010930153.1|2043792_2044809_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930748.1|2046788_2047802_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_010930749.1|2047888_2048794_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812179.1|2048950_2049295_+	exported protein	NA	NA	NA	NA	NA
WP_010930750.1|2049452_2049911_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_010930751.1|2049924_2052141_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_003812183.1|2052137_2053199_+	XdhC family protein	NA	NA	NA	NA	NA
WP_010930752.1|2053227_2054202_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930753.1|2054153_2054972_-	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
WP_003812191.1|2054984_2055593_-	LON peptidase substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930754.1|2055767_2056163_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930755.1|2056181_2057621_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
WP_003812199.1|2057649_2057997_+	GFA family protein	NA	NA	NA	NA	NA
WP_010929577.1|2058015_2058966_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2059618_2060569_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997035.1|2060652_2062470_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_019247659.1|2062543_2063191_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|2063203_2064133_-	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_014905663.1|2064302_2064767_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816977.1|2065014_2065695_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003816975.1|2065743_2067435_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_010930760.1|2067450_2068002_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816971.1|2067998_2068370_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930761.1|2068482_2069319_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_029443822.1|2069329_2069854_-	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|2069951_2070131_+	DUF3008 family protein	NA	NA	NA	NA	NA
WP_010930763.1|2070260_2071235_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003816964.1|2071365_2071722_+	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930764.1|2071711_2072587_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_010930765.1|2072685_2073570_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930766.1|2073591_2074887_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_003816959.1|2075835_2076486_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930767.1|2076573_2078094_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930768.1|2078351_2080217_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2081262_2082213_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268681.1|2082230_2082371_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930769.1|2083185_2083545_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_010930770.1|2083532_2084969_-	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930771.1|2084965_2085619_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930772.1|2085615_2086809_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930773.1|2086912_2088187_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_005012067.1|2088183_2089134_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	2100338	2141029	4107534	protease,transposase,tRNA	Klosneuvirus(25.0%)	37	NA	NA
WP_005013747.1|2100338_2101289_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2101387_2102338_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122784.1|2102297_2102711_-	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
WP_003816708.1|2102995_2103295_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930783.1|2103704_2105987_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.2e-36
WP_124740709.1|2106452_2106647_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930784.1|2106672_2108703_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
WP_006218592.1|2108722_2108935_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_003810720.1|2109212_2109752_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023852902.1|2109865_2111161_-	adenylosuccinate synthase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
WP_010930786.1|2111237_2112395_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_010930787.1|2112578_2113478_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_010930788.1|2113496_2114801_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930789.1|2114766_2115873_-	GTPase HflX	NA	NA	NA	NA	NA
WP_003810707.1|2115960_2116197_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930790.1|2116335_2117406_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810703.1|2117409_2118765_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_003810701.1|2118791_2119952_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_010930791.1|2119954_2120593_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_023995843.1|2120594_2121881_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930793.1|2121939_2123235_-	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_003810693.1|2123241_2123748_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_004568542.1|2123744_2124893_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810689.1|2124920_2125346_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_010930794.1|2125668_2128551_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_023852900.1|2128643_2129399_-	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930796.1|2130164_2131514_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_076879566.1|2131612_2132563_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930048.1|2132661_2133612_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930594.1|2133685_2134159_+	RidA family protein	NA	NA	NA	NA	NA
WP_010930593.1|2134184_2135393_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_003816734.1|2135389_2136163_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_014905757.1|2136162_2136786_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_010926757.1|2136951_2137212_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_010930591.1|2137515_2138097_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004568544.1|2138163_2138418_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930590.1|2138404_2141029_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
>prophage 19
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	2168812	2225097	4107534	protease,transposase	Lake_Baikal_phage(25.0%)	51	NA	NA
WP_010929577.1|2168812_2169763_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2169861_2170812_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930573.1|2171012_2171822_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_005013747.1|2171946_2172897_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930572.1|2172893_2173787_-	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_003812452.1|2173911_2174106_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_003812453.1|2174105_2174447_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_010930571.1|2174456_2176319_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	42.4	3.0e-101
WP_003812456.1|2176448_2176961_-	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA	NA
WP_003812458.1|2176963_2177287_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	52.8	6.8e-25
WP_003812460.1|2177288_2177699_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	79.0	7.5e-53
WP_010930570.1|2177736_2178948_-	IscS subfamily cysteine desulfurase	NA	NA	NA	NA	NA
WP_003812463.1|2178965_2179478_-	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA	NA
WP_010930569.1|2179693_2180185_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_010930568.1|2180437_2182474_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
WP_019247244.1|2182551_2183754_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_010930566.1|2183882_2184533_+	transcriptional repressor LexA	NA	A0A2H4JG58	uncultured_Caudovirales_phage	50.7	3.3e-10
WP_005012067.1|2186090_2187041_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247934.1|2187611_2187824_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247935.1|2187841_2188573_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812478.1|2188607_2189249_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010930565.1|2189241_2189910_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010930564.1|2192122_2192899_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930563.1|2192920_2194078_-	thiolase	NA	NA	NA	NA	NA
WP_003812491.1|2194074_2194506_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_015063637.1|2194502_2195306_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930561.1|2195319_2195721_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010930560.1|2195787_2196759_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930559.1|2196824_2198048_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247936.1|2198275_2199226_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930557.1|2199349_2201803_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
WP_010930556.1|2201991_2203296_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
WP_003812508.1|2203400_2204054_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
WP_010930555.1|2204056_2205367_-	trigger factor	NA	NA	NA	NA	NA
WP_010930554.1|2205563_2206124_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
WP_010930553.1|2206235_2206436_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
WP_003812519.1|2206781_2207348_-	DUF924 family protein	NA	NA	NA	NA	NA
WP_010930551.1|2207431_2207635_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
WP_003812524.1|2207941_2208262_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812526.1|2208303_2208585_-	membrane protein	NA	NA	NA	NA	NA
WP_010930550.1|2208659_2209916_-	autotransporter Phg	NA	NA	NA	NA	NA
WP_010930549.1|2210298_2210628_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003812536.1|2212198_2213020_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
WP_010930548.1|2213019_2214159_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
WP_019247938.1|2214165_2215062_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_010930546.1|2215058_2216984_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
WP_010926400.1|2217343_2219956_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_003812546.1|2220008_2222309_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
WP_003812548.1|2222305_2223514_-	fatty acid desaturase	NA	NA	NA	NA	NA
WP_010930545.1|2223775_2224150_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2224146_2225097_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	2228204	2282474	4107534	transposase,tRNA	Klosneuvirus(15.38%)	47	NA	NA
WP_010930542.1|2228204_2231066_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_010930541.1|2231068_2231575_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930540.1|2231679_2232888_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_033446178.1|2232889_2233828_-	membrane protein	NA	NA	NA	NA	NA
WP_010930538.1|2233989_2234463_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|2234459_2235410_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566334.1|2235520_2235961_-	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_010930537.1|2236089_2237319_-	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_004566336.1|2237357_2238179_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_029443743.1|2238232_2239384_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930535.1|2239475_2239964_-	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
WP_019247811.1|2242514_2245064_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930533.1|2245134_2247708_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_003813568.1|2247973_2248174_+	CsbD family protein	NA	NA	NA	NA	NA
WP_003813570.1|2248205_2248367_+	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_003813572.1|2248424_2248763_+	BON domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2248911_2249862_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2249960_2250911_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247882.1|2251685_2252354_+	arylesterase	NA	NA	NA	NA	NA
WP_019247881.1|2252335_2254351_-	SurA N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_004568486.1|2254533_2255283_+	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
WP_003816518.1|2255295_2256159_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_003816520.1|2256162_2257578_-	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
WP_010930530.1|2257711_2258440_-	redoxin family protein	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
WP_003811035.1|2258578_2258779_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_003816523.1|2258954_2259353_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003816525.1|2259376_2260777_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
WP_010930529.1|2260895_2261648_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930528.1|2261936_2262536_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248494.1|2262640_2263420_-	3'-5' exonuclease	NA	NA	NA	NA	NA
WP_003811022.1|2263416_2264301_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
WP_019247478.1|2264318_2265098_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.8e-32
WP_010930526.1|2265082_2265841_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
WP_003811015.1|2265966_2266614_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_010929632.1|2266881_2267898_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930524.1|2267995_2269036_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
WP_003811011.1|2269170_2270463_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
WP_003811007.1|2271822_2272206_+	thioredoxin family protein	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
WP_010930523.1|2272223_2272811_-	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
WP_010930048.1|2272848_2273799_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930801.1|2273897_2274458_-	diaminobutyrate acetyltransferase	NA	NA	NA	NA	NA
WP_010930802.1|2274454_2275000_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003818661.1|2275195_2276224_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930803.1|2276264_2277605_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	22.8	8.8e-18
WP_003818658.1|2277713_2278718_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010930804.1|2278824_2281425_+	TRAP transporter fused permease subunit	NA	NA	NA	NA	NA
WP_010930522.1|2281523_2282474_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	2321587	2385165	4107534	protease,transposase	uncultured_Caudovirales_phage(11.11%)	48	NA	NA
WP_010931070.1|2321587_2322538_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809615.1|2322839_2323316_-	transcription elongation factor GreA	NA	NA	NA	NA	NA
WP_019247142.1|2323939_2325577_+	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	30.2	8.8e-12
WP_003809610.1|2325607_2326921_-	pyrimidine permease	NA	Q9KX94	Enterobacteria_phage	67.1	2.1e-149
WP_004568205.1|2327054_2327372_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023852827.1|2327472_2328795_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|2328791_2329742_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2329840_2330791_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930836.1|2331320_2332343_-	putative 2-aminoethylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003820286.1|2332371_2333202_-	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA	NA
WP_029443740.1|2333218_2334916_-	putative 2-aminoethylphosphonate ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930838.1|2334980_2336057_-	putative 2-aminoethylphosphonate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.8	1.2e-28
WP_010930839.1|2336216_2337080_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930840.1|2337110_2337680_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930841.1|2337696_2338548_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_003813142.1|2339605_2340487_+|protease	protease HtpX	protease	NA	NA	NA	NA
WP_010930842.1|2340561_2341551_-	quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930843.1|2341613_2342564_-	DMT family transporter	NA	NA	NA	NA	NA
WP_003813147.1|2342626_2343484_+	DMT family transporter	NA	NA	NA	NA	NA
WP_003813149.1|2343543_2344032_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930844.1|2345604_2346795_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010930845.1|2346791_2348378_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010930846.1|2348396_2349464_-	tartrate dehydrogenase	NA	NA	NA	NA	NA
WP_010930847.1|2349568_2351113_-	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	25.4	3.1e-14
WP_010930848.1|2351532_2353107_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930849.1|2353214_2354231_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003813165.1|2354227_2355067_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930850.1|2355071_2356709_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	3.6e-21
WP_005013747.1|2356705_2357656_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930851.1|2357798_2359073_+	4-aminobutyrate--2-oxoglutarate transaminase	NA	A0A1V0SKB7	Klosneuvirus	27.9	1.6e-24
WP_010930852.1|2359102_2359393_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_047122810.1|2359465_2360479_+	histone deacetylase family protein	NA	A0A2K9L4C2	Tupanvirus	35.2	1.7e-42
WP_010930854.1|2360498_2361761_+	Zn-dependent hydrolase	NA	NA	NA	NA	NA
WP_010930855.1|2361763_2362687_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010930856.1|2362683_2364177_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930857.1|2364187_2365120_-	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
WP_076879554.1|2365301_2366627_+	aspartate aminotransferase family protein	NA	A0A1C9EHH3	Mycobacterium_phage	22.5	1.8e-07
WP_023853659.1|2366661_2368005_-	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
WP_023853666.1|2368077_2369598_-	DUF853 domain-containing protein	NA	A0A248XCZ8	Klebsiella_phage	44.9	1.7e-78
WP_010930861.1|2369752_2370484_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010930862.1|2370551_2371892_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_010930863.1|2371907_2372819_+	oxygen-dependent coproporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_010930864.1|2372809_2373403_+	nicotinate (nicotinamide) nucleotide adenylyltransferase	NA	NA	NA	NA	NA
WP_003813196.1|2373464_2373851_+	ribosome silencing factor	NA	NA	NA	NA	NA
WP_003813199.1|2373862_2374333_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_010930865.1|2374344_2374968_+	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_010930866.1|2374988_2377736_-	autotransporter Vag8	NA	NA	NA	NA	NA
WP_005012808.1|2384214_2385165_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	2530105	2588348	4107534	transposase,tRNA	Planktothrix_phage(28.57%)	52	NA	NA
WP_005012067.1|2530105_2531056_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930388.1|2531535_2532192_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
WP_010930387.1|2532206_2533874_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930386.1|2533876_2534506_-	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_014486072.1|2534717_2535812_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930384.1|2535956_2536769_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_023853502.1|2536772_2538476_-	FimV N-terminal domain protein	NA	NA	NA	NA	NA
WP_010930382.1|2538526_2539657_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930381.1|2539843_2540920_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_010930380.1|2541001_2541652_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_010930379.1|2541666_2543070_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_004567445.1|2543353_2544172_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930378.1|2544168_2544873_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.0	2.6e-13
WP_010930377.1|2545772_2546888_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_004567447.1|2546921_2547296_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930376.1|2547318_2548476_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA	NA
WP_003812666.1|2548488_2548722_-	lipoprotein	NA	NA	NA	NA	NA
WP_019247523.1|2549356_2552326_-	formate dehydrogenase subunit alpha	NA	NA	NA	NA	NA
WP_023853518.1|2552340_2552550_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248667.1|2552701_2553331_-	molecular chaperone TorD family protein	NA	NA	NA	NA	NA
WP_010930373.1|2553327_2555418_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_010930372.1|2555441_2556122_-	DUF3306 domain-containing protein	NA	NA	NA	NA	NA
WP_003820494.1|2556118_2556679_-	DUF3305 domain-containing protein	NA	NA	NA	NA	NA
WP_004567450.1|2556685_2557783_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010930371.1|2557935_2558529_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA	NA
WP_010930370.1|2558525_2559818_+	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_003812685.1|2559831_2560374_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
WP_010930369.1|2560383_2561220_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003820487.1|2561253_2562315_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	42.8	2.9e-80
WP_019247210.1|2562356_2563409_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_019247209.1|2563424_2563727_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|2563868_2564819_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930368.1|2564997_2566692_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003809599.1|2566688_2567774_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
WP_010930367.1|2567821_2568721_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003809593.1|2568731_2569376_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_010930366.1|2570397_2573640_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_023852833.1|2573650_2574805_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.4	3.3e-53
WP_010930364.1|2575031_2575994_+	transaldolase	NA	H6WFR1	Cyanophage	29.2	7.5e-11
WP_005013747.1|2576092_2577043_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930363.1|2577141_2578092_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811741.1|2578849_2579287_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003811743.1|2579332_2580226_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811746.1|2580273_2581446_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811748.1|2581442_2582597_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003811750.1|2582793_2583144_-	RnfH family protein	NA	NA	NA	NA	NA
WP_003811752.1|2583133_2583568_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_010930800.1|2583584_2584535_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811754.1|2584682_2585150_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_010930360.1|2585130_2586288_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811759.1|2586353_2587280_-	paraslipin	NA	NA	NA	NA	NA
WP_005012067.1|2587397_2588348_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	2630628	2697128	4107534	transposase	uncultured_Caudovirales_phage(40.0%)	56	NA	NA
WP_005012067.1|2630628_2631579_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811850.1|2631948_2632521_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
WP_003811852.1|2632523_2633534_+	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
WP_010930335.1|2633526_2634027_+	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
WP_003811855.1|2634037_2634379_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA	NA
WP_015041547.1|2634390_2635182_+	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA	NA
WP_003811859.1|2635198_2635468_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA	NA
WP_010930333.1|2635490_2636279_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA	NA
WP_010929632.1|2636325_2637342_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_014486070.1|2637558_2639001_-	PAS domain-containing protein	NA	A0A1B0V854	Salmonella_phage	41.8	1.0e-35
WP_010930332.1|2639179_2640799_-	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.3	1.5e-08
WP_010930331.1|2640919_2642740_-	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.6	6.4e-11
WP_010930330.1|2642818_2644351_-	flagellar hook-associated protein FlgL	NA	NA	NA	NA	NA
WP_010930329.1|2644384_2646031_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
WP_010930328.1|2646100_2647123_-	flagellar assembly peptidoglycan hydrolase FlgJ	NA	A0A088F6W1	Sulfitobacter_phage	31.4	1.9e-12
WP_010930327.1|2647140_2648274_-	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA	NA
WP_010930326.1|2648276_2648966_-	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA	NA
WP_010930325.1|2648965_2649751_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
WP_003817181.1|2649794_2650559_-	flagellar basal body rod protein FlgF	NA	NA	NA	NA	NA
WP_003817180.1|2650597_2652019_-	flagellar hook-basal body complex protein	NA	NA	NA	NA	NA
WP_010930324.1|2652084_2652789_-	flagellar basal body rod modification protein FlgD	NA	NA	NA	NA	NA
WP_003817176.1|2652836_2653256_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
WP_010930323.1|2653268_2653676_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
WP_010930322.1|2653859_2654570_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
WP_003817172.1|2654696_2654987_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
WP_003817170.1|2655004_2655487_+	flagellar protein FlgN	NA	NA	NA	NA	NA
WP_010930321.1|2659992_2661147_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA	NA
WP_010931363.1|2661452_2662469_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930319.1|2662715_2663504_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003812020.1|2663570_2664251_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812022.1|2664247_2665018_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	9.8e-30
WP_010930208.1|2665116_2666067_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811401.1|2666122_2667040_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_003811400.1|2667050_2668229_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	NA	NA	NA	NA
WP_010930318.1|2668248_2669244_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811396.1|2670832_2671441_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_003811393.1|2671428_2672469_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_003811391.1|2672486_2673449_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811389.1|2673445_2674639_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930317.1|2674635_2675433_-	citryl-CoA lyase	NA	NA	NA	NA	NA
WP_014486069.1|2675458_2676445_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930316.1|2676463_2678503_-	acetate--CoA ligase family protein	NA	NA	NA	NA	NA
WP_010930315.1|2678704_2679385_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930314.1|2679398_2680310_-	CoA ester lyase	NA	NA	NA	NA	NA
WP_003811381.1|2680306_2680885_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930313.1|2681023_2681929_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930312.1|2681936_2685356_+	TM0106 family RecB-like putative nuclease	NA	NA	NA	NA	NA
WP_010930311.1|2685343_2687944_-	BP1344/BB2830 family autotransporter	NA	NA	NA	NA	NA
WP_003811375.1|2688899_2689532_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003811372.1|2689925_2690684_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_003811370.1|2690680_2691883_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010930208.1|2692070_2693021_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930310.1|2693928_2695074_+	DUF3182 family protein	NA	NA	NA	NA	NA
WP_019247449.1|2695060_2695816_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003811361.1|2695932_2696112_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930208.1|2696177_2697128_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	2895467	2968792	4107534	protease,transposase,tRNA	Catovirus(22.22%)	52	NA	NA
WP_010930211.1|2895467_2896823_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003813618.1|2898301_2899024_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930207.1|2899078_2900062_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|2900191_2901142_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813621.1|2901138_2902041_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930206.1|2902128_2902887_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_023853245.1|2902899_2903991_-	cell division protein ZapE	NA	NA	NA	NA	NA
WP_003813626.1|2904088_2905516_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_010930204.1|2905745_2906960_-	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813631.1|2907005_2909876_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930202.1|2912286_2912775_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930201.1|2912900_2915597_+	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930200.1|2915751_2918034_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_019248935.1|2918207_2918831_+	serotype 2 fimbrial subunit	NA	NA	NA	NA	NA
WP_010930198.1|2918929_2919880_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812405.1|2919926_2920481_-	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_003816844.1|2920548_2921394_-	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_019248398.1|2921463_2922432_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_023995083.1|2922431_2923295_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010930196.1|2926127_2930054_-	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_010930194.1|2930789_2934020_-	autotransporter SphB3	NA	NA	NA	NA	NA
WP_010928340.1|2934301_2935129_-	TatD family hydrolase	NA	NA	NA	NA	NA
WP_003812422.1|2935162_2935858_-	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	38.6	7.0e-35
WP_019247537.1|2935850_2937131_-	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930192.1|2937140_2938118_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930191.1|2938099_2939800_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.3	1.3e-50
WP_010926448.1|2939902_2941006_+	peptide chain release factor 2	NA	NA	NA	NA	NA
WP_010926447.1|2941036_2941792_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930190.1|2941798_2943319_+|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
WP_010930189.1|2943361_2943664_+	membrane protein	NA	NA	NA	NA	NA
WP_003812436.1|2943660_2944293_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930188.1|2944371_2946237_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_020699602.1|2946233_2947028_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.3	1.2e-11
WP_010930186.1|2947056_2948172_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930185.1|2949076_2949955_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930184.1|2949954_2950779_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010929591.1|2950946_2951897_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930183.1|2952109_2954959_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010930182.1|2954940_2955669_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_019248549.1|2955809_2957273_-	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930180.1|2957269_2957641_-	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|2957658_2958972_+	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_003812703.1|2959008_2959467_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2959579_2960530_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930178.1|2960526_2961540_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_003812707.1|2961679_2962666_+	homoserine kinase	NA	NA	NA	NA	NA
WP_161633091.1|2963024_2963732_-	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_010929591.1|2964312_2965263_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809618.1|2965414_2966017_-	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_010930175.1|2966035_2966668_+	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_162096758.1|2966712_2966964_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930174.1|2966905_2968792_+|protease	ATP-dependent zinc metalloprotease FtsH	protease	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
>prophage 25
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	2980517	3030236	4107534	transposase,holin,tRNA	uncultured_Mediterranean_phage(60.0%)	43	NA	NA
WP_005013747.1|2980517_2981468_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809441.1|2981494_2981959_-	barstar family protein	NA	NA	NA	NA	NA
WP_014486065.1|2983165_2985454_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930165.1|2985570_2986443_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930164.1|2986485_2987640_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930163.1|2987674_2988505_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_023853525.1|2988588_2990133_+	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930161.1|2990175_2990535_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003819794.1|2990536_2990950_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_003809432.1|2990990_2991308_-	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003809431.1|2991392_2992109_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930160.1|2992372_2993794_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_005015810.1|2996466_2997417_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_161633096.1|2997396_2997651_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853536.1|2997989_2999006_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930157.1|2999341_2999983_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_003809423.1|3000073_3001510_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_023853534.1|3001667_3002741_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_010930155.1|3002737_3003874_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_003809416.1|3004017_3004362_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
WP_010930154.1|3004428_3006309_+	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_003809411.1|3006358_3007294_+	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
WP_010931363.1|3007626_3008643_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_015041211.1|3009580_3011008_+|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010930151.1|3011004_3012027_+	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_003809396.1|3012016_3012490_+	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930149.1|3012630_3013518_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_014486064.1|3013514_3015158_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_010930148.1|3015154_3016204_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_010931363.1|3016992_3018009_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003817162.1|3018108_3018741_-	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_003811911.1|3018749_3019139_-	chemotaxis response regulator CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_010930146.1|3019191_3020244_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_023995045.1|3021107_3021872_-	Tar ligand binding domain-containing protein	NA	NA	NA	NA	NA
WP_003811919.1|3021945_3022446_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930144.1|3022460_3024518_-	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_019247393.1|3024544_3024838_-	response regulator	NA	NA	NA	NA	NA
WP_003817154.1|3024939_3025887_-	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_003811927.1|3025899_3026775_-	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003811929.1|3026895_3027456_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_010930143.1|3027490_3027814_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811933.1|3028249_3028987_+	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_005012067.1|3029285_3030236_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	3038446	3100601	4107534	transposase	Erysipelothrix_phage(20.0%)	46	NA	NA
WP_023853531.1|3038446_3039580_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930137.1|3039683_3040325_+	glutathione transferase	NA	NA	NA	NA	NA
WP_010930136.1|3040479_3042828_+	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
WP_003809454.1|3042824_3043763_+	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_010930135.1|3043788_3044979_+	acetate kinase	NA	NA	NA	NA	NA
WP_010930134.1|3044975_3045749_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010930133.1|3045778_3046972_-	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_010930132.1|3047089_3048100_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010930131.1|3048117_3050154_-	transketolase	NA	NA	NA	NA	NA
WP_010930130.1|3050348_3051089_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_010929969.1|3051187_3052138_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012808.1|3052236_3053187_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003817151.1|3053229_3054405_+	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010930129.1|3054626_3056417_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_010930128.1|3056429_3058091_-	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930127.1|3058103_3060809_-	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_003817147.1|3061101_3062856_+	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930126.1|3062852_3063479_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003811948.1|3063475_3064327_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_019248379.1|3064402_3066517_+	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_010930124.1|3066703_3067318_+	SCO family protein	NA	NA	NA	NA	NA
WP_010930123.1|3067463_3067715_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_014486063.1|3067784_3069167_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930121.1|3069163_3072343_-	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_029443805.1|3073150_3074068_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930119.1|3074119_3074851_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_010926548.1|3074910_3075483_+	chorismate lyase	NA	NA	NA	NA	NA
WP_010929632.1|3076991_3078008_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|3078145_3079195_-	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_005012067.1|3079299_3080250_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813314.1|3080345_3081071_-	CoA pyrophosphatase	NA	NA	NA	NA	NA
WP_003813315.1|3081281_3081662_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_014905652.1|3081967_3082840_+	EamA family transporter	NA	NA	NA	NA	NA
WP_023852686.1|3082847_3083228_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023852693.1|3083381_3084656_-	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
WP_010930113.1|3086143_3087052_-	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_010930112.1|3087849_3088914_-	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
WP_170954292.1|3090750_3091752_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003813333.1|3091974_3092616_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_003821527.1|3092698_3094525_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010930111.1|3094768_3095698_-	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
WP_010930110.1|3095697_3096447_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_003821521.1|3096518_3097433_-	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
WP_010930108.1|3097452_3098598_+	lytic murein transglycosylase B	NA	NA	NA	NA	NA
WP_014486062.1|3098658_3099570_-	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
WP_005012067.1|3099650_3100601_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 27
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	3120023	3175153	4107534	transposase	Bacillus_phage(28.57%)	48	NA	NA
WP_005012808.1|3120023_3120974_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566317.1|3121103_3121496_+	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
WP_003821497.1|3121772_3122684_-	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
WP_010930088.1|3122808_3123783_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|3123779_3124730_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810865.1|3124828_3125914_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_010930072.1|3126011_3126422_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810859.1|3127037_3128951_+	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930071.1|3129086_3131699_+	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_019248496.1|3131700_3132435_-	metallophosphoesterase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_003810851.1|3132598_3133780_+	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_003810850.1|3133776_3133989_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930069.1|3133985_3134966_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_010930068.1|3135011_3135839_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_023852913.1|3135988_3137803_+	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_003810840.1|3137857_3138241_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_010930066.1|3138237_3139188_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810839.1|3139300_3139552_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|3140057_3141176_-	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810832.1|3141295_3141508_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930064.1|3141667_3141889_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3141941_3142892_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930062.1|3144068_3145439_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_010930061.1|3145471_3146263_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930060.1|3146275_3147331_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019247557.1|3147356_3148232_-	amidohydrolase	NA	NA	NA	NA	NA
WP_023852826.1|3148337_3148586_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003819989.1|3148620_3150075_-	carboxylase	NA	NA	NA	NA	NA
WP_004568140.1|3150071_3150593_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_010930057.1|3150621_3151974_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_029444137.1|3152197_3155086_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930056.1|3157230_3158532_+	phospholipase A	NA	NA	NA	NA	NA
WP_010930055.1|3158546_3159263_-	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930054.1|3159544_3160225_+	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_003809770.1|3160236_3160404_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023852837.1|3160512_3160659_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930052.1|3160752_3161412_-	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_010930051.1|3161810_3163643_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_005012067.1|3163639_3164590_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814007.1|3165753_3167469_+	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
WP_003814006.1|3167479_3167971_+	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_010930015.1|3168043_3169060_+	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_003814004.1|3169227_3170007_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_003814003.1|3170025_3170553_-	lipoprotein	NA	NA	NA	NA	NA
WP_003814002.1|3170846_3171116_+	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_003821234.1|3171206_3173366_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003814000.1|3173486_3174206_+	lipoprotein	NA	NA	NA	NA	NA
WP_005013747.1|3174202_3175153_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	3190738	3262751	4107534	transposase,holin	Leptospira_phage(20.0%)	60	NA	NA
WP_023994644.1|3190738_3191755_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003813987.1|3191951_3192776_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_076879542.1|3192853_3193777_-	transcriptional regulator LrhA	NA	NA	NA	NA	NA
WP_010930021.1|3193947_3195099_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010930022.1|3195102_3196134_+	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_010930023.1|3196262_3197234_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813982.1|3197258_3199343_+	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_003813981.1|3199409_3200402_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930024.1|3200510_3201845_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010930025.1|3201870_3203883_-	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_023853163.1|3203879_3205928_-	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010930027.1|3206031_3206679_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003813974.1|3206819_3207314_+	azurin	NA	NA	NA	NA	NA
WP_010926969.1|3207357_3208029_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_010930029.1|3208043_3209537_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930030.1|3209533_3212647_-	MexW/MexI family multidrug efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.5	4.5e-57
WP_010930031.1|3212659_3213766_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010930032.1|3213889_3214558_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|3214778_3215729_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813960.1|3215811_3217770_+|holin	choline BCCT transporter BetT	holin	A0A2I7QNT1	Vibrio_phage	30.3	8.0e-28
WP_010930033.1|3217797_3218499_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019248500.1|3218645_3219461_+	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_003813954.1|3219457_3220273_+	metallophosphoesterase	NA	NA	NA	NA	NA
WP_003813952.1|3220289_3221093_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_003813951.1|3221076_3221511_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003813949.1|3221507_3221942_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_019247352.1|3221943_3222498_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929591.1|3222515_3223466_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930034.1|3223778_3224936_+	porin	NA	NA	NA	NA	NA
WP_003813943.1|3225124_3225484_+	NADH-quinone oxidoreductase subunit A	NA	NA	NA	NA	NA
WP_003813941.1|3225520_3225997_+	NADH-quinone oxidoreductase subunit B	NA	NA	NA	NA	NA
WP_010926963.1|3226071_3226695_+	NADH-quinone oxidoreductase subunit C	NA	NA	NA	NA	NA
WP_010930035.1|3226697_3227954_+	NADH-quinone oxidoreductase subunit D	NA	NA	NA	NA	NA
WP_003813932.1|3227999_3228494_+	NADH-quinone oxidoreductase subunit NuoE	NA	NA	NA	NA	NA
WP_003813930.1|3228490_3229858_+	NADH-quinone oxidoreductase subunit NuoF	NA	NA	NA	NA	NA
WP_010930036.1|3229873_3232201_+	NADH-quinone oxidoreductase subunit G	NA	NA	NA	NA	NA
WP_003813926.1|3232200_3233274_+	NADH-quinone oxidoreductase subunit NuoH	NA	NA	NA	NA	NA
WP_003813924.1|3233295_3233784_+	NADH-quinone oxidoreductase subunit NuoI	NA	NA	NA	NA	NA
WP_003813921.1|3233801_3234449_+	NADH-quinone oxidoreductase subunit J	NA	NA	NA	NA	NA
WP_003813920.1|3234445_3234754_+	NADH-quinone oxidoreductase subunit NuoK	NA	NA	NA	NA	NA
WP_010930037.1|3234771_3236784_+	NADH-quinone oxidoreductase subunit L	NA	NA	NA	NA	NA
WP_019247436.1|3236780_3238283_+	NADH-quinone oxidoreductase subunit M	NA	NA	NA	NA	NA
WP_019248505.1|3238293_3239778_+	NADH-quinone oxidoreductase subunit NuoN	NA	NA	NA	NA	NA
WP_003813915.1|3239794_3240124_+	DUF2818 family protein	NA	NA	NA	NA	NA
WP_010930039.1|3240424_3242656_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_003813909.1|3242867_3245138_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_010930041.1|3245250_3245769_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930042.1|3245778_3246555_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003813904.1|3246551_3248342_-	acetolactate synthase large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	26.1	2.0e-25
WP_010930044.1|3248401_3249382_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930045.1|3249519_3250437_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930046.1|3250565_3251426_-	phosphoserine phosphatase SerB	NA	NA	NA	NA	NA
WP_010926959.1|3251461_3254917_-	transcription-repair coupling factor	NA	NA	NA	NA	NA
WP_003813895.1|3254946_3255630_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003813893.1|3255626_3256115_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
WP_041337087.1|3256213_3257164_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813068.1|3257160_3258180_-	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	35.7	1.5e-49
WP_010930049.1|3258189_3260898_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	24.0	2.8e-15
WP_010930050.1|3261045_3261702_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|3261800_3262751_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 29
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	3314344	3357250	4107534	transposase	Planktothrix_phage(50.0%)	33	NA	NA
WP_005012808.1|3314344_3315295_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929985.1|3315396_3315825_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|3318313_3319264_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852739.1|3319223_3319748_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003814467.1|3319879_3320851_+	FecR family protein	NA	NA	NA	NA	NA
WP_010929983.1|3320970_3323415_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_010929982.1|3323430_3324021_-	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|3324264_3325215_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814462.1|3325372_3326638_-	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003814461.1|3326671_3327769_-	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_005013747.1|3328423_3329374_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814459.1|3329374_3329944_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929980.1|3330011_3330827_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929979.1|3330993_3332613_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929978.1|3332691_3333633_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929977.1|3333632_3334517_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010927038.1|3334520_3336173_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
WP_010929976.1|3336212_3337610_+	amidase family protein	NA	NA	NA	NA	NA
WP_019247242.1|3337651_3339031_+	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_003814443.1|3339070_3339289_-	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
WP_003814441.1|3339629_3340502_+	oxaloacetate decarboxylase	NA	NA	NA	NA	NA
WP_005012067.1|3340661_3341612_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814437.1|3342343_3342721_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_003814436.1|3342705_3343407_-	membrane protein	NA	NA	NA	NA	NA
WP_010931409.1|3343550_3344243_-	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_010931410.1|3344242_3345346_-	phosphotransferase	NA	NA	NA	NA	NA
WP_010931411.1|3345455_3347828_+	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931412.1|3347824_3349384_+	chaperone SurA	NA	NA	NA	NA	NA
WP_010931413.1|3349408_3350206_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931414.1|3350237_3351383_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_003814419.1|3351487_3352930_+	pyruvate kinase	NA	NA	NA	NA	NA
WP_010929184.1|3352932_3354162_-	spore maturation protein	NA	NA	NA	NA	NA
WP_005012808.1|3356299_3357250_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 30
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	3366542	3399225	4107534	tail,transposase,tRNA,terminase	uncultured_Caudovirales_phage(21.05%)	41	NA	NA
WP_003814636.1|3366542_3368273_-|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_003814635.1|3368338_3368911_+	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_010931420.1|3368891_3369578_+	response regulator	NA	NA	NA	NA	NA
WP_010931421.1|3369933_3370605_+	SOS response-associated peptidase	NA	Q5QF62	Pseudomonas_virus	39.9	4.7e-36
WP_010931422.1|3370933_3371155_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010926433.1|3371154_3371436_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931423.1|3371432_3371948_-	DUF2514 family protein	NA	NA	NA	NA	NA
WP_010931424.1|3371947_3372499_-	lysozyme	NA	NA	NA	NA	NA
WP_010931425.1|3372477_3372720_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931426.1|3372724_3373537_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926428.1|3373536_3373800_-	hypothetical protein	NA	NA	NA	NA	NA
WP_124740660.1|3373840_3374038_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931428.1|3374018_3374435_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931429.1|3374439_3378396_-	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
WP_010931430.1|3378388_3378778_-	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931431.1|3378774_3379308_-	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931432.1|3379375_3379735_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931433.1|3379744_3382357_-|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931434.1|3382382_3382673_-	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_003813412.1|3382690_3383020_-|tail	phage tail assembly chaperone	tail	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931435.1|3383029_3383548_-|tail	phage tail protein	tail	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_010931436.1|3383802_3384303_-	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931437.1|3384310_3384733_-	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931438.1|3384729_3385128_-	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931439.1|3385124_3385520_-	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931440.1|3385519_3385720_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|3385721_3386204_-	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_010931442.1|3386266_3386518_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|3387192_3388143_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931443.1|3388571_3389174_-	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_010931444.1|3389296_3389539_-	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931445.1|3389544_3390600_-	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931446.1|3390628_3392047_-	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931447.1|3392049_3393327_-|terminase	terminase large subunit	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_019247942.1|3393313_3393799_-|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_005012067.1|3394438_3395389_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_161633094.1|3395645_3396335_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853179.1|3396327_3396579_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931451.1|3397133_3397745_+	S24 family peptidase	NA	NA	NA	NA	NA
WP_019247378.1|3397816_3398023_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3398274_3399225_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 31
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	3410444	3456763	4107534	protease,transposase,tRNA	Bacillus_phage(40.0%)	44	NA	NA
WP_010930800.1|3410444_3411395_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931467.1|3411471_3413292_+	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010931466.1|3413296_3414370_-	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_003814230.1|3414492_3415461_+	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010927008.1|3415534_3416446_+	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814226.1|3416464_3417037_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010931465.1|3417117_3417666_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_010931464.1|3417665_3419255_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_003814221.1|3419324_3419564_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_023995141.1|3419604_3420630_-|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814217.1|3420695_3421877_-	UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase	NA	NA	NA	NA	NA
WP_010931463.1|3421973_3422426_+	membrane protein	NA	NA	NA	NA	NA
WP_010931462.1|3422435_3423776_-	aminopeptidase P N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931461.1|3424092_3425130_+	sodium:calcium antiporter	NA	NA	NA	NA	NA
WP_003814209.1|3425511_3425871_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041166340.1|3425954_3426896_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879617.1|3426970_3427921_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814206.1|3428214_3429309_+	porin	NA	NA	NA	NA	NA
WP_003814205.1|3429390_3430272_+	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814203.1|3430293_3431133_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_010931459.1|3431208_3432726_+|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_010931458.1|3432822_3433923_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931457.1|3433939_3434362_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_003814195.1|3434384_3434597_-	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931456.1|3434643_3435564_-	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_010931455.1|3435746_3436496_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_003814188.1|3436498_3436828_+	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_010931454.1|3437034_3438468_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
WP_003814185.1|3438479_3438863_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_010931453.1|3438924_3439725_+	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_005015810.1|3439823_3440774_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931477.1|3440829_3441642_+	competence/damage-inducible protein A	NA	NA	NA	NA	NA
WP_003814178.1|3441800_3442649_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931478.1|3442849_3447244_+	dermonecrotic toxin	NA	NA	NA	NA	NA
WP_010931479.1|3447337_3448315_-	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
WP_003814172.1|3448701_3449280_+	TIGR01841 family phasin	NA	NA	NA	NA	NA
WP_010931480.1|3449427_3450477_-	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_003814165.1|3450517_3451252_-	arginyltransferase	NA	NA	NA	NA	NA
WP_010931481.1|3452046_3452628_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_003814158.1|3452624_3453518_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003820995.1|3453651_3454053_+	DoxX family protein	NA	NA	NA	NA	NA
WP_010927005.1|3454070_3454673_-	DUF2946 family protein	NA	NA	NA	NA	NA
WP_003814152.1|3454730_3455114_-	membrane protein	NA	NA	NA	NA	NA
WP_005012067.1|3455812_3456763_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 32
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	3601442	3656416	4107534	transposase	Lake_Baikal_phage(20.0%)	44	NA	NA
WP_005012067.1|3601442_3602393_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929827.1|3602509_3603577_+	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_019247670.1|3603652_3606781_-	Rne/Rng family ribonuclease	NA	NA	NA	NA	NA
WP_023853155.1|3607288_3608254_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_010929830.1|3608256_3608928_+	HAD family hydrolase	NA	NA	NA	NA	NA
WP_010929831.1|3609084_3610044_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA	NA
WP_003821340.1|3610051_3610714_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA	NA
WP_005013747.1|3610710_3611661_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929806.1|3611782_3613036_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929805.1|3613013_3613976_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929804.1|3614107_3614602_+	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010929803.1|3614601_3615834_+	CoA transferase	NA	NA	NA	NA	NA
WP_019247316.1|3616579_3616861_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929802.1|3616847_3617834_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929801.1|3617977_3618382_+	RidA family protein	NA	NA	NA	NA	NA
WP_010929800.1|3618523_3621910_+	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929799.1|3621940_3623404_+	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_019248869.1|3623424_3625041_+	L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010929797.1|3625126_3625786_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929796.1|3625815_3626256_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929795.1|3626766_3626970_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	58.2	5.8e-14
WP_010929794.1|3627145_3628051_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929577.1|3628149_3629100_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3629198_3630149_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814674.1|3631930_3633124_-	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_010929793.1|3633189_3634218_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_019247419.1|3634244_3635417_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003814681.1|3635542_3636520_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814685.1|3636530_3637502_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929791.1|3637568_3638354_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_003814691.1|3638346_3639579_-	CoA transferase	NA	NA	NA	NA	NA
WP_003814694.1|3639774_3640530_-	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
WP_010929789.1|3640640_3641159_+	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
WP_010929788.1|3642947_3644348_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_003820700.1|3644447_3644792_+	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
WP_003814701.1|3644880_3645351_+	universal stress protein	NA	NA	NA	NA	NA
WP_019247421.1|3645761_3646160_+	GTP-binding protein	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
WP_010929577.1|3646291_3647242_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814730.1|3649686_3650421_+	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
WP_003814728.1|3650830_3651010_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814726.1|3651200_3652514_+	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929786.1|3652529_3654041_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010929785.1|3654037_3655243_-	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_022997984.1|3655438_3656416_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 33
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	3746229	3811989	4107534	protease,transposase	Bacillus_phage(20.0%)	60	NA	NA
WP_005013747.1|3746229_3747180_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814960.1|3747302_3748031_+	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA	NA
WP_010929739.1|3748127_3749306_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
WP_010929738.1|3749302_3750136_+	symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA	NA	NA	NA	NA
WP_010929737.1|3750172_3750913_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929736.1|3751032_3752208_-	dihydroorotase	NA	NA	NA	NA	NA
WP_003820560.1|3752204_3753158_-	aspartate carbamoyltransferase catalytic subunit	NA	A7RB08	Paramecium_bursaria_Chlorella_virus	35.8	2.5e-30
WP_010929735.1|3753171_3753573_-	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_010927118.1|3753565_3754171_-	YqgE/AlgH family protein	NA	NA	NA	NA	NA
WP_003814980.1|3754258_3754423_-	rubredoxin	NA	NA	NA	NA	NA
WP_003814984.1|3755383_3756037_+	thiamine phosphate synthase	NA	NA	NA	NA	NA
WP_010929733.1|3756053_3757337_+	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA	NA
WP_010929732.1|3757576_3759202_+	DUF342 domain-containing protein	NA	NA	NA	NA	NA
WP_003814990.1|3759295_3759697_-	RidA family protein	NA	NA	NA	NA	NA
WP_003814993.1|3759721_3760156_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814996.1|3760157_3761807_-	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	31.2	2.6e-56
WP_010929731.1|3761847_3763017_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929730.1|3763019_3763883_-	enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010929729.1|3767246_3767951_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.2	1.1e-16
WP_003815010.1|3767944_3768739_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	23.5	2.6e-09
WP_003815011.1|3768735_3769701_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815013.1|3769704_3770625_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815015.1|3770721_3771885_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929728.1|3772107_3772998_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003815019.1|3773001_3773505_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929727.1|3773547_3774546_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930048.1|3774542_3775493_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_111735998.1|3775581_3775869_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004566083.1|3777069_3777630_+	5'-3'-deoxyribonucleotidase	NA	A0A1E1EUN3	Acanthamoeba_castellanii_mimivirus	30.8	3.2e-14
WP_004566082.1|3779132_3780014_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929725.1|3780127_3781330_+	MFS transporter	NA	NA	NA	NA	NA
WP_003819105.1|3781458_3783318_-	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_003819104.1|3783395_3784205_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929724.1|3784275_3785277_+	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_003807710.1|3785308_3786169_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929723.1|3786368_3787373_+	alpha/beta hydrolase	NA	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	31.5	7.5e-30
WP_003819100.1|3787369_3788956_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003807706.1|3788964_3789891_+	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
WP_003807705.1|3789913_3790540_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_005015810.1|3790638_3791589_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014906092.1|3791585_3792722_-	trypsin-like peptidase domain-containing protein	NA	W5SAB9	Pithovirus	31.2	1.2e-07
WP_010927226.1|3792775_3793552_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_010929721.1|3793576_3794035_-	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_003815815.1|3794174_3794816_+	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_003815816.1|3794880_3796263_+	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_019247426.1|3796282_3797137_+	cytochrome c1	NA	NA	NA	NA	NA
WP_003815819.1|3797295_3797907_+	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_003815821.1|3797916_3798366_+|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_010929719.1|3798884_3799025_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929718.1|3799032_3799194_-	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|3799471_3800422_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929717.1|3801465_3801744_-	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_010929716.1|3802886_3803435_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
WP_010929715.1|3803497_3805177_-	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929714.1|3805173_3806925_-	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_003817696.1|3806921_3807047_-	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_004567834.1|3807060_3808215_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_010929713.1|3808230_3809850_-	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010929712.1|3809933_3810479_-	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929591.1|3811038_3811989_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 34
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	3821329	3883157	4107534	protease,transposase,tRNA	uncultured_Caudovirales_phage(25.0%)	52	NA	NA
WP_010929706.1|3821329_3821866_+|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_019247543.1|3821796_3823182_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_003814332.1|3823324_3823963_-	VTT domain-containing protein	NA	NA	NA	NA	NA
WP_010929705.1|3824049_3825939_+	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814337.1|3825935_3826877_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_003814339.1|3826982_3828032_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_010929704.1|3828284_3828986_+	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_010929703.1|3828982_3829681_+	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929702.1|3829681_3831037_+	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929701.1|3831033_3831525_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_003814351.1|3831543_3832500_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814355.1|3833910_3836013_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814356.1|3836183_3837227_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814358.1|3837270_3838014_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814363.1|3839035_3839446_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_010929700.1|3840395_3841193_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930742.1|3841291_3842242_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|3842238_3843189_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3843275_3844226_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929681.1|3844340_3845342_-	HindIII family type II restriction endonuclease	NA	NA	NA	NA	NA
WP_010929682.1|3845432_3845999_-	preprotein translocase subunit SecD	NA	NA	NA	NA	NA
WP_010929683.1|3846317_3848231_+	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA	NA
WP_010929684.1|3848272_3849703_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_019247308.1|3849815_3851228_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_003818947.1|3851244_3851940_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|3852158_3853109_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929687.1|3853133_3854033_-	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_010929688.1|3854187_3854736_+	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929689.1|3854774_3855494_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929690.1|3855565_3858508_+	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_033455792.1|3859101_3861897_+|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_010929692.1|3862354_3863287_+	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929693.1|3863398_3864748_+	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929694.1|3864779_3865505_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929695.1|3865555_3866407_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929696.1|3866536_3867223_+	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_003819086.1|3867222_3867867_+	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_003807674.1|3867923_3868199_+	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003807672.1|3868224_3868521_+	YciI family protein	NA	NA	NA	NA	NA
WP_010929697.1|3868566_3869346_+	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_023853200.1|3869351_3870392_+	cyclase family protein	NA	NA	NA	NA	NA
WP_010929699.1|3870496_3870820_-	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_010931070.1|3870976_3871927_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929680.1|3872540_3873509_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929679.1|3873537_3874749_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929678.1|3874818_3875559_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929677.1|3875703_3878568_-	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929676.1|3878627_3879002_-	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929675.1|3879083_3880184_-	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_019248671.1|3880578_3881472_-	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929673.1|3881468_3882104_-	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.8e-83
WP_010929591.1|3882206_3883157_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 35
NZ_CP010839	Bordetella pertussis strain H378 chromosome, complete genome	4107534	4029705	4083137	4107534	transposase	Planktothrix_phage(40.0%)	45	NA	NA
WP_010931661.1|4029705_4030656_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931662.1|4030825_4032052_+	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA	NA
WP_010931663.1|4032251_4033118_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_003815027.1|4033110_4034073_+	Nudix family hydrolase	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
WP_010927663.1|4034173_4035124_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|4035222_4036173_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|4036271_4037222_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994937.1|4037218_4038712_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_003815032.1|4038708_4041816_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931665.1|4041812_4044881_-	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931666.1|4044877_4046128_-	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_003815038.1|4046308_4047070_-	cell division protein ZapD	NA	NA	NA	NA	NA
WP_019247320.1|4047102_4047753_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_003820519.1|4047755_4048595_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_003815047.1|4048835_4049579_+	copper resistance protein NlpE N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_003815049.1|4049661_4050009_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815051.1|4050106_4050949_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_003815053.1|4050993_4051881_-	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_003815055.1|4051907_4052096_-	DUF3460 family protein	NA	NA	NA	NA	NA
WP_010931669.1|4052193_4053651_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010931670.1|4053637_4055164_+	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_003815061.1|4055182_4055650_-	CopD family protein	NA	NA	NA	NA	NA
WP_010931671.1|4055649_4056672_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_169507388.1|4056792_4057512_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.9	4.7e-34
WP_003815066.1|4057587_4058688_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815068.1|4058689_4059880_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815070.1|4059999_4061016_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
WP_003815073.1|4061334_4062006_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
WP_010927126.1|4062002_4062911_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_010931672.1|4063122_4063770_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
WP_010931673.1|4067621_4068698_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_003815084.1|4068708_4069518_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815086.1|4069607_4070381_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010930363.1|4070563_4071514_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077274100.1|4071402_4072425_+	CoA transferase	NA	NA	NA	NA	NA
WP_010931674.1|4072414_4073569_+	CoA transferase	NA	NA	NA	NA	NA
WP_010931675.1|4073608_4075021_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_019247370.1|4075145_4076012_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931677.1|4076013_4076838_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_023853488.1|4076834_4077596_+	nitroreductase	NA	M1I6Q5	Acanthocystis_turfacea_Chlorella_virus	31.0	2.0e-19
WP_003808010.1|4077676_4078363_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931679.1|4078536_4079544_+	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA	NA
WP_003819309.1|4079540_4080320_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931680.1|4080377_4081640_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929591.1|4082186_4083137_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
