assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001594325.2_ASM159432v2	NZ_CP008858	Pseudomonas aeruginosa strain F63912 chromosome, complete genome	1	337012-337125	1	CRISPRCasFinder	no		csa3,PD-DExK,RT,DEDDh,cas3,DinG,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	GGCCAAAGAACTGGAGGGCAAGGTATGA	28	0	0	NA	NA	NA	1	1	Orphan	csa3,PD-DExK,RT,DEDDh,cas3,DinG,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA|168aa|down_2|NZ_CP008858.2_341697_342201_-,NA|251aa|down_5|NZ_CP008858.2_343954_344707_-,NA|185aa|down_7|NZ_CP008858.2_345475_346030_-	NA|293aa|up_9|NZ_CP008858.2_323860_324739_-	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase	NA|222aa|up_8|NZ_CP008858.2_324901_325567_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|354aa|up_7|NZ_CP008858.2_325627_326689_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|459aa|up_6|NZ_CP008858.2_326944_328321_-	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|251aa|up_5|NZ_CP008858.2_328599_329352_+	pfam07722, Peptidase_C26, Peptidase C26	NA|453aa|up_4|NZ_CP008858.2_329392_330751_+	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|457aa|up_3|NZ_CP008858.2_330816_332187_+	PRK07480, PRK07480, putative aminotransferase; Validated	NA|368aa|up_2|NZ_CP008858.2_332302_333406_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|366aa|up_1|NZ_CP008858.2_333824_334922_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|385aa|up_0|NZ_CP008858.2_334976_336131_+	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG	NA|796aa|down_0|NZ_CP008858.2_338168_340556_-	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only]	NA|351aa|down_1|NZ_CP008858.2_340666_341719_+	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|168aa|down_2|NZ_CP008858.2_341697_342201_-	NA	NA|204aa|down_3|NZ_CP008858.2_342305_342917_-	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs	NA|340aa|down_4|NZ_CP008858.2_342915_343935_+	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|251aa|down_5|NZ_CP008858.2_343954_344707_-	NA	NA|233aa|down_6|NZ_CP008858.2_344755_345454_+	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones]	NA|185aa|down_7|NZ_CP008858.2_345475_346030_-	NA	NA|165aa|down_8|NZ_CP008858.2_346295_346790_+	COG1683, COG1683, Uncharacterized conserved protein [Function unknown]	NA|231aa|down_9|NZ_CP008858.2_346792_347485_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]
GCF_001594325.2_ASM159432v2	NZ_CP008858	Pseudomonas aeruginosa strain F63912 chromosome, complete genome	2	1922697-1922798	2	CRISPRCasFinder	no	DEDDh	csa3,PD-DExK,RT,DEDDh,cas3,DinG,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Unclear	GCGGCGGGTATCGGCGGATAACGCC	25	0	0	NA	NA	NA	1	1	Orphan	csa3,PD-DExK,RT,DEDDh,cas3,DinG,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA|454aa|up_7|NZ_CP008858.2_1914838_1916200_-,NA|106aa|down_6|NZ_CP008858.2_1929042_1929360_+	NA|286aa|up_9|NZ_CP008858.2_1913034_1913892_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|268aa|up_8|NZ_CP008858.2_1914031_1914835_-	COG2853, VacJ, Surface lipoprotein [Cell envelope biogenesis, outer membrane]	NA|454aa|up_7|NZ_CP008858.2_1914838_1916200_-	NA	NA|74aa|up_6|NZ_CP008858.2_1916342_1916564_-	COG3205, COG3205, Predicted membrane protein [Function unknown]	NA|286aa|up_5|NZ_CP008858.2_1916857_1917715_+	cd13639, PBP2_OpuAC_like, Substrate binding domain of Lactococcus lactis ABC-type transporter OpuA and related proteins; the type 2 periplasmic binding protein fold	NA|104aa|up_4|NZ_CP008858.2_1917932_1918244_+	COG3162, COG3162, Predicted membrane protein [Function unknown]	NA|552aa|up_3|NZ_CP008858.2_1918240_1919896_+	PRK09395, actP, cation/acetate symporter ActP	NA|600aa|up_2|NZ_CP008858.2_1919985_1921785_+	COG2905, COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]	DEDDh|209aa|up_1|NZ_CP008858.2_1921781_1922408_+	PRK09145, PRK09145, 3'-5' exonuclease	NA|53aa|up_0|NZ_CP008858.2_1922516_1922675_+	pfam11752, DUF3309, Protein of unknown function (DUF3309)	NA|375aa|down_0|NZ_CP008858.2_1922934_1924059_+	COG3146, COG3146, Uncharacterized protein conserved in bacteria [Function unknown]	NA|89aa|down_1|NZ_CP008858.2_1924091_1924358_-	pfam10976, DUF2790, Protein of unknown function (DUF2790)	NA|611aa|down_2|NZ_CP008858.2_1924639_1926472_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|188aa|down_3|NZ_CP008858.2_1926534_1927098_-	PRK10903, PRK10903, peptidylprolyl isomerase A	NA|276aa|down_4|NZ_CP008858.2_1927079_1927907_-	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|310aa|down_5|NZ_CP008858.2_1927913_1928843_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|106aa|down_6|NZ_CP008858.2_1929042_1929360_+	NA	NA|214aa|down_7|NZ_CP008858.2_1929506_1930148_+	COG1182, AcpD, Acyl carrier protein phosphodiesterase [Lipid metabolism]	NA|300aa|down_8|NZ_CP008858.2_1930252_1931152_-	pfam00892, EamA, EamA-like transporter family	NA|112aa|down_9|NZ_CP008858.2_1931161_1931497_-	PRK10089, PRK10089, chaperone CsaA
GCF_001594325.2_ASM159432v2	NZ_CP008858	Pseudomonas aeruginosa strain F63912 chromosome, complete genome	3	4349943-4351496	1,3,1	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,PD-DExK,RT,DEDDh,cas3,DinG,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E	CGGTTCATCCCCACGCATGTGGGGAACAC,CGGTTCATCCCCACGCATGTGGGGAACAC,CGGTTCATCCCCACGCATGTGGGGAACAC	29,29,29	2	2	4350277-4350308|4351192-4351223	NZ_CP008858.2_2414305-2414336|NZ_CP008858.2_797766-797797	I-E,II-B:I-E,II-B:I-E,II-B	25,25,25	25	TypeI-E	csa3,PD-DExK,RT,DEDDh,cas3,DinG,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA|415aa|up_1|NZ_CP008858.2_4347183_4348428_-,NA	NA|527aa|up_9|NZ_CP008858.2_4335576_4337157_+	cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase	NA|335aa|up_8|NZ_CP008858.2_4337260_4338265_-	COG2055, COG2055, Malate/L-lactate dehydrogenases [Energy production and conversion]	NA|542aa|up_7|NZ_CP008858.2_4338493_4340119_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|109aa|up_6|NZ_CP008858.2_4340131_4340458_-	pfam02974, Inh, Protease inhibitor Inh	NA|480aa|up_5|NZ_CP008858.2_4340773_4342213_-	pfam08548, Peptidase_M10_C, Peptidase M10 serralysin C terminal	NA|482aa|up_4|NZ_CP008858.2_4342571_4344017_-	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family	NA|433aa|up_3|NZ_CP008858.2_4344020_4345319_-	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family	NA|594aa|up_2|NZ_CP008858.2_4345315_4347097_-	TIGR01842, Proteases_secretion_ATP-binding_protein_PrtD, type I secretion system ABC transporter, PrtD family	NA|415aa|up_1|NZ_CP008858.2_4347183_4348428_-	NA	NA|105aa|up_0|NZ_CP008858.2_4349469_4349784_+	pfam18226, QslA_E, LasR-specific antiactivator QslA chain E	cas2|100aa|down_0|NZ_CP008858.2_4351560_4351860_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|306aa|down_1|NZ_CP008858.2_4351856_4352774_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|204aa|down_2|NZ_CP008858.2_4352773_4353385_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas5|221aa|down_3|NZ_CP008858.2_4353359_4354022_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|381aa|down_4|NZ_CP008858.2_4354023_4355166_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|177aa|down_5|NZ_CP008858.2_4355175_4355706_-	PRK13921, PRK13921, CRISPR-associated Cse2 family protein; Provisional	cas8e|523aa|down_6|NZ_CP008858.2_4355702_4357271_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|891aa|down_7|NZ_CP008858.2_4357273_4359946_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|859aa|down_8|NZ_CP008858.2_4362237_4364814_+	PRK13557, PRK13557, histidine kinase; Provisional	NA|591aa|down_9|NZ_CP008858.2_4364836_4366609_-	cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families
GCF_001594325.2_ASM159432v2	NZ_CP008858	Pseudomonas aeruginosa strain F63912 chromosome, complete genome	4	4360667-4361977	4,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,PD-DExK,RT,DEDDh,cas3,DinG,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E	CGGTTCATCCCCACACCCGTGGGGAACAC,CGGTTCATCCCCACACCCGTGGGGAACAC,CGGTTCATCCCCACACCCGTGGGGAACAC	29,29,29	0	0	NA	NA	I-E,II-B:I-E,II-B:I-E,II-B	21,21,20	21	TypeI-E	csa3,PD-DExK,RT,DEDDh,cas3,DinG,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA|415aa|up_9|NZ_CP008858.2_4347183_4348428_-,NA	NA|415aa|up_9|NZ_CP008858.2_4347183_4348428_-	NA	NA|105aa|up_8|NZ_CP008858.2_4349469_4349784_+	pfam18226, QslA_E, LasR-specific antiactivator QslA chain E	cas2|100aa|up_7|NZ_CP008858.2_4351560_4351860_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|306aa|up_6|NZ_CP008858.2_4351856_4352774_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|204aa|up_5|NZ_CP008858.2_4352773_4353385_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas5|221aa|up_4|NZ_CP008858.2_4353359_4354022_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|381aa|up_3|NZ_CP008858.2_4354023_4355166_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|177aa|up_2|NZ_CP008858.2_4355175_4355706_-	PRK13921, PRK13921, CRISPR-associated Cse2 family protein; Provisional	cas8e|523aa|up_1|NZ_CP008858.2_4355702_4357271_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|891aa|up_0|NZ_CP008858.2_4357273_4359946_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|859aa|down_0|NZ_CP008858.2_4362237_4364814_+	PRK13557, PRK13557, histidine kinase; Provisional	NA|591aa|down_1|NZ_CP008858.2_4364836_4366609_-	cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families	NA|187aa|down_2|NZ_CP008858.2_4366688_4367249_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|266aa|down_3|NZ_CP008858.2_4367413_4368211_+	PRK06563, PRK06563, crotonase/enoyl-CoA hydratase family protein	NA|295aa|down_4|NZ_CP008858.2_4368267_4369152_+	COG4757, COG4757, Predicted alpha/beta hydrolase [General function prediction only]	NA|483aa|down_5|NZ_CP008858.2_4369534_4370983_+	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|384aa|down_6|NZ_CP008858.2_4370979_4372131_+	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|504aa|down_7|NZ_CP008858.2_4372120_4373632_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|261aa|down_8|NZ_CP008858.2_4373634_4374417_-	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain	NA|168aa|down_9|NZ_CP008858.2_4374608_4375112_+	pfam14595, Thioredoxin_9, Thioredoxin
