The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	0	5176	2598959		Synechococcus_phage(100.0%)	4	NA	NA
WP_002289280.1|1002_1269_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_061573545.1|1778_3905_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_002289282.1|4092_4362_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_002289284.1|4612_5176_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	37.1	2.3e-12
>prophage 2
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	10157	10898	2598959		Planktothrix_phage(100.0%)	1	NA	NA
WP_002294240.1|10157_10898_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	5.5e-30
>prophage 3
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	17063	27734	2598959		Bacillus_phage(25.0%)	8	NA	NA
WP_002289812.1|17063_18065_-	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.8	2.3e-07
WP_002290528.1|18077_18680_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_002294252.1|18849_19296_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_002294254.1|19371_20085_-	trehalose operon repressor	NA	A0A291LID1	Streptomyces_phage	39.7	1.2e-05
WP_002297133.1|20307_22296_+	PTS system trehalose-specific EIIBC component	NA	NA	NA	NA	NA
WP_002294256.1|22380_22941_-	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_061573432.1|22962_25071_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	41.1	1.8e-57
WP_002297135.1|25088_27734_-	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	26.1	3.6e-39
>prophage 4
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	33122	34992	2598959		Pneumococcus_phage(33.33%)	3	NA	NA
WP_002294268.1|33122_33632_-	QueT transporter family protein	NA	E7DN70	Pneumococcus_phage	31.8	7.5e-10
WP_002297929.1|34012_34774_-	3-oxoacyl-ACP reductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	31.7	1.2e-16
WP_002290506.1|34770_34992_-	DUF2829 domain-containing protein	NA	A0A0S2MV93	Bacillus_phage	33.3	1.1e-05
>prophage 5
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	38024	38759	2598959		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_002290500.1|38024_38759_+	aquaporin family protein	NA	M1HWZ0	Paramecium_bursaria_Chlorella_virus	31.4	1.4e-25
>prophage 6
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	48667	51322	2598959		Brazilian_cedratvirus(50.0%)	3	NA	NA
WP_002297790.1|48667_49423_-	ATP-binding cassette domain-containing protein	NA	A0A2R8FG22	Brazilian_cedratvirus	28.1	2.2e-13
WP_002297789.1|49419_50379_-	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA	NA
WP_002297787.1|50371_51322_-	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4IY97	uncultured_Caudovirales_phage	40.5	5.6e-67
>prophage 7
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	59895	60582	2598959		Megavirus(100.0%)	1	NA	NA
WP_002287896.1|59895_60582_-	ribonuclease III	NA	K7YH73	Megavirus	32.3	9.1e-27
>prophage 8
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	64639	70307	2598959		Bacillus_virus(33.33%)	5	NA	NA
WP_002297777.1|64639_65584_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.1	3.9e-20
WP_002287889.1|65584_66589_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.2	5.1e-18
WP_002294295.1|66856_67099_-	acyl carrier protein	NA	NA	NA	NA	NA
WP_002289721.1|67220_68222_-	phosphate acyltransferase PlsX	NA	NA	NA	NA	NA
WP_061573438.1|68270_70307_-	ATP-dependent DNA helicase RecG	NA	A0A2H4JBQ0	uncultured_Caudovirales_phage	23.1	3.1e-06
>prophage 9
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	81993	83678	2598959		Staphylococcus_phage(50.0%)	2	NA	NA
WP_002298564.1|81993_82863_-	energy-coupling factor ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.8	5.0e-14
WP_002317038.1|82838_83678_-	energy-coupling factor ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.3	1.3e-19
>prophage 10
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	98451	107373	2598959		Klosneuvirus(25.0%)	9	NA	NA
WP_002290442.1|98451_99639_-	elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	24.4	6.4e-12
WP_002294317.1|99810_101898_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	28.9	2.6e-64
WP_002290440.1|101991_102462_-	30S ribosomal protein S7	NA	NA	NA	NA	NA
WP_002294318.1|102545_102959_-	30S ribosomal protein S12	NA	NA	NA	NA	NA
WP_002294319.1|103277_103961_+	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA	NA
WP_002294320.1|104093_104675_+	recombinase family protein	NA	A0A219Y9V9	Aeromonas_phage	34.6	2.2e-18
WP_002294321.1|104846_105533_+	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA	NA
WP_002324276.1|105830_106538_-	purine-nucleoside phosphorylase	NA	NA	NA	NA	NA
WP_002289198.1|106554_107373_-	purine-nucleoside phosphorylase	NA	Q5YBA4	Grouper_iridovirus	45.8	6.9e-58
>prophage 11
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	110743	116094	2598959		Staphylococcus_phage(33.33%)	5	NA	NA
WP_002289202.1|110743_112306_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	32.4	1.7e-20
WP_002289203.1|112517_113600_-	BMP family ABC transporter substrate-binding protein	NA	A0A0A7DN02	Lactobacillus_phage	41.5	9.2e-58
WP_002298572.1|113665_114064_-	cytidine deaminase	NA	NA	NA	NA	NA
WP_061573440.1|114084_114747_-	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
WP_002298573.1|114792_116094_-	pyrimidine-nucleoside phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	58.2	2.3e-124
>prophage 12
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	119345	120911	2598959		Hokovirus(100.0%)	1	NA	NA
WP_002298578.1|119345_120911_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	30.6	3.5e-18
>prophage 13
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	125074	130583	2598959	transposase	Pandoravirus(50.0%)	5	NA	NA
WP_002297376.1|125074_126475_-	6-phospho-beta-galactosidase	NA	A0A0B5JD41	Pandoravirus	30.5	1.0e-45
WP_002288637.1|126711_127497_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA	NA
WP_002288638.1|127499_128192_+	HAD family phosphatase	NA	NA	NA	NA	NA
WP_002288640.1|128465_128837_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061573442.1|129263_130583_+|transposase	IS1380 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	82.2	5.9e-208
>prophage 14
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	141935	150219	2598959		Tupanvirus(25.0%)	4	NA	NA
WP_002297801.1|141935_143558_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	26.5	1.5e-48
WP_002297799.1|143686_144550_-	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	29.9	8.8e-11
WP_002288375.1|146778_148071_-	adenylosuccinate synthase	NA	G5CQQ4	Megavirus	36.0	8.1e-69
WP_002288373.1|148851_150219_-	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	54.8	3.0e-130
>prophage 15
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	153327	161571	2598959		Bacillus_virus(50.0%)	7	NA	NA
WP_002299768.1|153327_153840_-	single-stranded DNA-binding protein	NA	Q938M7	Temperate_phage	60.0	1.3e-46
WP_002288366.1|153889_154189_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_002288365.1|154424_156896_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	9.9e-100
WP_002288364.1|156915_158862_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	43.6	2.7e-140
WP_002288363.1|158858_159983_-	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_002295251.1|159969_160212_-	S4 domain-containing protein YaaA	NA	NA	NA	NA	NA
WP_002288361.1|160440_161571_-	DNA polymerase III subunit beta	NA	A0A0A8IL17	Aurantimonas_phage	25.3	1.9e-29
>prophage 16
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	170948	180806	2598959	tRNA	Bacillus_phage(33.33%)	9	NA	NA
WP_002288805.1|170948_171716_+	ParA family protein	NA	Q8JL10	Natrialba_phage	33.6	2.8e-29
WP_002299776.1|171702_172593_+	ParB/RepB/Spo0J family partition protein	NA	I3NLC2	Bifidobacterium_phage	33.5	1.1e-16
WP_002293106.1|172613_172805_+	DUF951 domain-containing protein	NA	NA	NA	NA	NA
WP_002325956.1|172813_173914_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_002299780.1|174003_174699_+	DUF1129 domain-containing protein	NA	NA	NA	NA	NA
WP_002295264.1|175202_176687_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.8	5.6e-98
WP_002307286.1|177356_178628_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	53.4	1.5e-88
WP_002295267.1|178921_180130_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	27.3	2.7e-26
WP_002295268.1|180116_180806_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	38.1	1.8e-38
>prophage 17
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	188020	192916	2598959	protease	Klebsiella_phage(50.0%)	3	NA	NA
WP_002299386.1|188020_190513_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A0A8J958	Klebsiella_phage	38.3	9.0e-125
WP_002289033.1|190733_191657_+	U32 family peptidase	NA	NA	NA	NA	NA
WP_002318037.1|191662_192916_+	U32 family peptidase	NA	Q6DW11	Phage_TP	32.9	7.4e-43
>prophage 18
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	207464	218236	2598959		Anomala_cuprea_entomopoxvirus(33.33%)	5	NA	NA
WP_002318033.1|207464_208271_-	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	25.1	3.8e-08
WP_002289390.1|208267_209173_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002324442.1|209190_210159_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002295964.1|210886_214504_+	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	24.7	1.5e-48
WP_002288141.1|214561_218236_+	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	24.9	6.5e-63
>prophage 19
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	230048	231853	2598959		Streptococcus_phage(50.0%)	2	NA	NA
WP_002318025.1|230048_231179_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	49.5	1.4e-69
WP_002331266.1|231175_231853_+	beta-phosphoglucomutase	NA	A0A1D8KNV9	Synechococcus_phage	23.2	2.1e-07
>prophage 20
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	237873	244510	2598959		Staphylococcus_phage(25.0%)	6	NA	NA
WP_002287502.1|237873_238791_+	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	43.8	4.6e-42
WP_002324451.1|238783_239566_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_061573447.1|239566_240247_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	30.5	1.7e-25
WP_002326086.1|240239_241136_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_061573448.1|241331_242981_+	DNA mismatch repair protein MutS	NA	F2QAF9	Pyramimonas_orientalis_virus	25.7	4.9e-18
WP_002287494.1|243574_244510_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	35.1	6.1e-26
>prophage 21
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	251425	252289	2598959		Streptococcus_phage(100.0%)	1	NA	NA
WP_061573450.1|251425_252289_+	AraC family transcriptional regulator	NA	D0R0F8	Streptococcus_phage	26.5	1.0e-22
>prophage 22
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	260692	265540	2598959		Brevibacillus_phage(50.0%)	4	NA	NA
WP_002287463.1|260692_261961_+	glycoside hydrolase family 73 protein	NA	A0A0K2CP65	Brevibacillus_phage	37.6	1.6e-16
WP_002287461.1|262630_263095_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002287459.1|263078_263708_+	nitroreductase family protein	NA	NA	NA	NA	NA
WP_002326097.1|264061_265540_+	Msr family ABC-F type ribosomal protection protein	NA	A0A1B0RXA0	Streptococcus_phage	41.8	5.8e-87
>prophage 23
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	269553	272361	2598959		Streptococcus_phage(66.67%)	3	NA	NA
WP_002298218.1|269553_270801_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	57.7	9.4e-115
WP_002287451.1|270797_271604_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.4	3.0e-45
WP_002287450.1|271833_272361_+	dUTP diphosphatase	NA	J9PV85	Bacillus_phage	55.2	2.1e-44
>prophage 24
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	277469	278882	2598959	tRNA	Catovirus(100.0%)	1	NA	NA
WP_002322772.1|277469_278882_+|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	31.7	2.0e-52
>prophage 25
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	282987	285535	2598959		Streptococcus_phage(50.0%)	2	NA	NA
WP_002287428.1|282987_284256_+	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	37.6	1.8e-65
WP_002287425.1|284248_285535_+	insulinase family protein	NA	A0A2H4UVM3	Bodo_saltans_virus	27.5	3.9e-07
>prophage 26
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	289570	293469	2598959		Bacillus_phage(50.0%)	3	NA	NA
WP_002298208.1|289570_290617_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	67.3	2.6e-126
WP_002287336.1|291027_292584_+	ribonuclease Y	NA	NA	NA	NA	NA
WP_002298207.1|292662_293469_-	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	34.1	1.5e-33
>prophage 27
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	298393	303797	2598959		Anomala_cuprea_entomopoxvirus(25.0%)	5	NA	NA
WP_002287343.1|298393_299074_+	metal ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	30.4	5.1e-14
WP_002287344.1|299046_299871_+	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_002287345.1|300037_300856_+	pur operon repressor	NA	A0A1V0SKE5	Klosneuvirus	27.1	2.1e-06
WP_002298200.1|301358_302732_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A2K9L277	Tupanvirus	35.8	3.4e-33
WP_002287347.1|302825_303797_+	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	32.6	4.9e-42
>prophage 28
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	309369	318569	2598959	tRNA	Abalone_herpesvirus(25.0%)	8	NA	NA
WP_002287358.1|309369_309984_+	guanylate kinase	NA	A0A143DIC6	Abalone_herpesvirus	34.6	2.2e-24
WP_002287365.1|309988_310294_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_061573454.1|310546_312955_+	primosomal protein N'	NA	NA	NA	NA	NA
WP_061573455.1|312969_313461_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.4	2.3e-16
WP_002298189.1|313453_314392_+|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	30.3	1.8e-09
WP_002298188.1|314391_315750_+	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA	NA
WP_002287376.1|315762_316503_+	Stp1/IreP family PP2C-type Ser/Thr phosphatase	NA	NA	NA	NA	NA
WP_002287377.1|316499_318569_+	Stk1 family PASTA domain-containing Ser/Thr kinase	NA	A0A1V0SDC3	Indivirus	30.3	3.5e-21
>prophage 29
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	322711	324286	2598959		Mycobacterium_phage(100.0%)	1	NA	NA
WP_061573456.1|322711_324286_+	C40 family peptidase	NA	B5LJD6	Mycobacterium_phage	50.5	2.3e-17
>prophage 30
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	337673	345581	2598959	tRNA,protease	Cafeteria_roenbergensis_virus(25.0%)	6	NA	NA
WP_002287414.1|337673_339119_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	E3T4I1	Cafeteria_roenbergensis_virus	24.5	6.8e-08
WP_002287415.1|339118_339664_+	hypoxanthine phosphoribosyltransferase	NA	A0A1V0SEQ1	Hokovirus	25.3	4.1e-06
WP_002287418.1|339753_341865_+|protease	ATP-dependent zinc metalloprotease FtsH	protease	C7U047	Ostreococcus_tauri_virus	50.3	9.1e-110
WP_002296053.1|342081_342969_+	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
WP_002290055.1|342969_343974_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_002296055.1|344084_345581_+|tRNA	lysine--tRNA ligase	tRNA	A0A2K9KZX5	Tupanvirus	40.9	8.7e-91
>prophage 31
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	353891	355085	2598959		Staphylococcus_phage(100.0%)	1	NA	NA
WP_002289731.1|353891_355085_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	72.0	1.3e-150
>prophage 32
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	358407	375306	2598959	tRNA	Bacillus_phage(50.0%)	10	NA	NA
WP_002285883.1|358407_360120_+	ABC transporter ATP-binding protein	NA	F2Y302	Organic_Lake_phycodnavirus	25.4	1.2e-14
WP_002285885.1|360122_361892_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.4	1.2e-54
WP_002285906.1|362096_362663_-	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	42.8	2.2e-34
WP_002285909.1|362662_363619_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	57.4	3.3e-43
WP_002285911.1|363618_364275_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_002285913.1|364644_366663_+	LysM peptidoglycan-binding domain-containing protein	NA	Q9ZXE4	Bacillus_phage	39.6	7.5e-13
WP_002285916.1|367089_369504_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	72.8	0.0e+00
WP_002285917.1|369851_371405_+	glycosyl hydrolase	NA	NA	NA	NA	NA
WP_002285918.1|371785_373570_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.2	2.7e-46
WP_002285920.1|373584_375306_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.0	1.7e-37
>prophage 33
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	414746	417118	2598959		Streptococcus_phage(50.0%)	2	NA	NA
WP_002285994.1|414746_415088_+	YlbF family regulator	NA	A0A1X9I5Y8	Streptococcus_phage	34.9	1.3e-10
WP_061573459.1|415363_417118_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.9	4.1e-39
>prophage 34
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	423214	424207	2598959		Enterobacteria_phage(100.0%)	1	NA	NA
WP_002286006.1|423214_424207_-	LacI family DNA-binding transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	30.2	4.5e-27
>prophage 35
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	454158	455468	2598959		Streptomyces_phage(50.0%)	2	NA	NA
WP_002286201.1|454158_454593_-	HIT family protein	NA	D7NW73	Streptomyces_phage	34.1	1.2e-08
WP_002286199.1|454730_455468_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.7	1.8e-25
>prophage 36
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	466891	471885	2598959	portal	Tupanvirus(50.0%)	5	NA	NA
WP_002286153.1|466891_468475_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.9	6.5e-52
WP_002293650.1|469052_469196_-|portal	portal protein	portal	NA	NA	NA	NA
WP_002293649.1|469418_469898_-	universal stress protein	NA	NA	NA	NA	NA
WP_002293648.1|469970_470255_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002289088.1|470598_471885_-	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	50.0	9.4e-110
>prophage 37
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	475105	477319	2598959		Orpheovirus(100.0%)	1	NA	NA
WP_002289096.1|475105_477319_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	35.8	2.3e-10
>prophage 38
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	480635	486845	2598959	tRNA	Orpheovirus(33.33%)	4	NA	NA
WP_002289103.1|480635_481928_+|tRNA	histidine--tRNA ligase	tRNA	A0A2I2L577	Orpheovirus	25.8	7.2e-25
WP_002289105.1|481942_483712_+|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SJ84	Klosneuvirus	25.3	1.1e-12
WP_002293644.1|483820_484696_+	YitT family protein	NA	NA	NA	NA	NA
WP_002303199.1|484961_486845_+	acetyltransferase	NA	B5WZU0	Pseudomonas_phage	29.9	4.5e-28
>prophage 39
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	489999	496341	2598959		Listeria_phage(50.0%)	2	NA	NA
WP_002288954.1|489999_493128_+	SMC family ATPase	NA	A0A059T7I2	Listeria_phage	25.8	1.9e-07
WP_002288952.1|493146_496341_+	SNF2 helicase associated domain-containing protein	NA	A0A2L1IWL4	Gordonia_phage	28.4	4.1e-37
>prophage 40
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	502754	560094	2598959	transposase,tRNA,bacteriocin	Bacillus_phage(21.43%)	59	NA	NA
WP_002296623.1|502754_504050_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	37.5	3.9e-55
WP_002289850.1|504139_504817_-	DsbA family protein	NA	NA	NA	NA	NA
WP_002289849.1|504934_505510_-	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_002289848.1|505640_506345_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
WP_002289847.1|506322_507120_+	NAD kinase	NA	NA	NA	NA	NA
WP_002294562.1|507121_508021_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_002294561.1|508038_509400_+	magnesium transporter	NA	NA	NA	NA	NA
WP_002294560.1|509461_510103_-	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_002294559.1|510211_511078_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_002289592.1|511298_511802_+|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
WP_002289593.1|511850_512510_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_002289594.1|512529_515118_+	ATP-dependent RecD-like DNA helicase	NA	A0A218KCE8	Bacillus_phage	29.2	8.6e-62
WP_002289596.1|515220_515448_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002289597.1|515557_516187_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_002289599.1|516183_517263_-	GHKL domain-containing protein	NA	NA	NA	NA	NA
WP_002324227.1|517379_518312_+	ABC transporter ATP-binding protein	NA	A0A285PWH2	Cedratvirus	33.2	5.9e-21
WP_002294551.1|518325_519471_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_002296167.1|519457_520630_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_002294549.1|520728_521694_-	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_002294548.1|522290_522794_+	QueT transporter family protein	NA	E7DN70	Pneumococcus_phage	34.3	3.4e-07
WP_002294577.1|522849_523494_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_002294578.1|523655_523808_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_002294579.1|523831_524002_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_002294580.1|524102_524648_+	transcription termination/antitermination protein NusG	NA	NA	NA	NA	NA
WP_002289897.1|524706_525612_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_002294583.1|525784_526804_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_002294584.1|526894_527767_-	L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha	NA	NA	NA	NA	NA
WP_002294585.1|527779_528448_-	L-serine ammonia-lyase, iron-sulfur-dependent, subunit beta	NA	NA	NA	NA	NA
WP_002291638.1|528790_529213_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_002294587.1|529316_530006_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_002291634.1|530415_530919_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
WP_002294588.1|530971_531340_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
WP_002296327.1|531445_532135_+	TVP38/TMEM64 family protein	NA	NA	NA	NA	NA
WP_002320938.1|532216_533266_+	MFS transporter	NA	NA	NA	NA	NA
WP_002295743.1|533359_534268_+|transposase	IS982-like element ISEfm1 family transposase	transposase	NA	NA	NA	NA
WP_002290558.1|534657_536190_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	28.0	3.3e-45
WP_002287787.1|536423_537125_+	glucosamine-6-phosphate deaminase	NA	NA	NA	NA	NA
WP_002287788.1|537378_538092_+	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	43.7	6.5e-20
WP_002287791.1|538400_539540_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_002287792.1|539628_540594_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A096XT60	Enterococcus_phage	70.4	3.4e-128
WP_002287793.1|540643_542803_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	63.2	3.8e-265
WP_002287795.1|542961_543186_-	glutaredoxin-like protein NrdH	NA	A0A0M7REK7	Lactobacillus_phage	42.7	1.7e-11
WP_002287797.1|543586_544060_+	ferrous iron transport protein A	NA	NA	NA	NA	NA
WP_002287799.1|544056_546189_+	ferrous iron transport protein B	NA	NA	NA	NA	NA
WP_002290587.1|546190_546325_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002287801.1|546418_547063_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002287805.1|547249_548443_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	37.0	1.2e-29
WP_002287807.1|548435_550163_+	ABC transporter permease/substrate binding protein	NA	NA	NA	NA	NA
WP_002304799.1|550556_550754_+|bacteriocin	leucocin A/sakacin P family class II bacteriocin	bacteriocin	NA	NA	NA	NA
WP_002287810.1|550755_551067_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_002321654.1|551170_551317_+|bacteriocin	EntF family bacteriocin induction factor	bacteriocin	NA	NA	NA	NA
WP_000222572.1|551313_552267_-|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_002322652.1|552896_553466_+	DUF1836 domain-containing protein	NA	NA	NA	NA	NA
WP_002288847.1|553452_554313_+	DegV family protein	NA	A0A1X9I5J4	Streptococcus_phage	24.4	2.7e-12
WP_002288850.1|554502_555207_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	41.6	5.8e-45
WP_061573460.1|555211_557047_+	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	37.4	1.2e-36
WP_002288852.1|557043_558360_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288853.1|558360_559230_+	two-component system regulatory protein YycI	NA	NA	NA	NA	NA
WP_002288854.1|559284_560094_+	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	33.6	3.1e-34
>prophage 41
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	563250	566811	2598959	transposase	uncultured_virus(66.67%)	3	NA	NA
WP_002288862.1|563250_563535_+	co-chaperone GroES	NA	A0A221S4M3	uncultured_virus	40.2	2.0e-12
WP_002288864.1|563585_565211_+	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	56.8	2.2e-156
WP_002296840.1|565623_566811_+|transposase	IS256-like element IS16 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	46.3	8.2e-92
>prophage 42
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	570478	572787	2598959		Bacillus_virus(100.0%)	2	NA	NA
WP_002287304.1|570478_571951_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.0	1.2e-108
WP_002287302.1|571962_572787_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	56.8	6.1e-78
>prophage 43
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	588832	589993	2598959		Streptococcus_phage(100.0%)	1	NA	NA
WP_002287280.1|588832_589993_+	D-3-phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	36.1	1.9e-61
>prophage 44
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	597703	604127	2598959		Bacillus_phage(66.67%)	4	NA	NA
WP_002287267.1|597703_599431_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	5.6e-49
WP_002287265.1|599427_601320_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	31.5	1.6e-60
WP_002287264.1|602023_602893_+	extradiol dioxygenase	NA	NA	NA	NA	NA
WP_002346760.1|603101_604127_+	serine hydrolase	NA	A0A076YS03	Mycobacterium_phage	28.0	2.2e-05
>prophage 45
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	613900	615052	2598959		Micromonas_sp._RCC1109_virus(100.0%)	1	NA	NA
WP_002287246.1|613900_615052_+	mannitol-1-phosphate 5-dehydrogenase	NA	E5EQS6	Micromonas_sp._RCC1109_virus	30.0	1.1e-16
>prophage 46
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	623231	629462	2598959		Lactococcus_phage(25.0%)	7	NA	NA
WP_002289675.1|623231_623816_+	thymidine kinase	NA	A0A1W6JJU6	Lactococcus_phage	52.1	1.0e-47
WP_002289676.1|623818_624892_+	peptide chain release factor 1	NA	NA	NA	NA	NA
WP_002303629.1|624884_625724_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_002300130.1|625716_625896_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002294101.1|625917_626943_+	threonylcarbamoyl-AMP synthase	NA	S4VW33	Pandoravirus	42.7	1.3e-58
WP_002294099.1|627117_628362_+	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	55.1	6.7e-105
WP_002303627.1|628514_629462_+	alpha/beta hydrolase	NA	A0A2P1EM31	Moumouvirus	42.0	3.6e-66
>prophage 47
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	637517	643377	2598959		Planktothrix_phage(33.33%)	4	NA	NA
WP_002289241.1|637517_638153_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.4	8.4e-27
WP_002289242.1|638170_638986_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002289243.1|639304_640741_+	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	29.4	1.4e-48
WP_002289244.1|640929_643377_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	50.7	8.1e-86
>prophage 48
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	651769	658563	2598959	tRNA	Bacillus_virus(40.0%)	6	NA	NA
WP_002289332.1|651769_652840_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.5e-20
WP_002289330.1|652829_653783_+	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	33.7	2.2e-18
WP_002289328.1|653794_654805_+	helix-turn-helix domain-containing protein	NA	A0A288TXV8	Enterococcus_phage	40.8	2.8e-56
WP_061573462.1|655089_655911_-	NUDIX hydrolase	NA	G3MA14	Bacillus_virus	32.8	2.7e-25
WP_002289337.1|656007_656286_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002289325.1|656553_658563_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	38.3	1.4e-96
>prophage 49
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	664699	670820	2598959		Bacillus_phage(66.67%)	5	NA	NA
WP_002289507.1|664699_665809_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	Q6GZ03	Mycoplasma_phage	33.0	1.2e-20
WP_002289508.1|666017_666440_+	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_002289509.1|666762_667299_+	folate family ECF transporter S component	NA	NA	NA	NA	NA
WP_002289511.1|667338_669102_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.2	1.5e-44
WP_002294013.1|669104_670820_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.3	1.7e-50
>prophage 50
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	681154	682036	2598959		Bacillus_phage(100.0%)	1	NA	NA
WP_002287122.1|681154_682036_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	50.3	1.3e-73
>prophage 51
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	688200	688863	2598959		Bacillus_virus(100.0%)	1	NA	NA
WP_002287128.1|688200_688863_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.7	2.5e-21
>prophage 52
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	707378	709783	2598959		Bacillus_virus(33.33%)	3	NA	NA
WP_002287163.1|707378_707888_-	phosphatidylglycerophosphatase A	NA	G3MBC5	Bacillus_virus	56.1	1.5e-39
WP_002287165.1|707999_708998_-	NAD(P)/FAD-dependent oxidoreductase	NA	Q9JRK7	Streptococcus_phage	54.1	2.6e-30
WP_002287167.1|709198_709783_+	peptidylprolyl isomerase	NA	A0A1V0S9I2	Catovirus	43.4	2.0e-27
>prophage 53
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	718094	723001	2598959	transposase	Paenibacillus_phage(50.0%)	5	NA	NA
WP_086953888.1|718094_719257_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	51.3	1.6e-79
WP_002287966.1|719465_719840_+	iron-sulfur cluster biosynthesis family protein	NA	NA	NA	NA	NA
WP_002287965.1|719953_720583_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_002296289.1|721213_721378_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002294080.1|721672_723001_+	C1 family peptidase	NA	R4TV59	Phaeocystis_globosa_virus	38.1	7.3e-73
>prophage 54
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	727875	728436	2598959		Geobacillus_virus(100.0%)	1	NA	NA
WP_002287958.1|727875_728436_+	haloacid dehalogenase	NA	A0A0H3UZF4	Geobacillus_virus	45.1	2.3e-28
>prophage 55
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	731678	790316	2598959	transposase,tRNA,head,terminase,integrase,portal,tail,capsid	Staphylococcus_phage(18.75%)	60	776577:776603	791385:791411
WP_002287955.1|731678_732890_+|tRNA	tRNA 4-thiouridine(8) synthase ThiI	tRNA	NA	NA	NA	NA
WP_061573463.1|733462_734110_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_002287953.1|734502_737148_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	42.9	4.0e-163
WP_002294071.1|737457_738771_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_002287951.1|738760_739414_+	HAD family phosphatase	NA	NA	NA	NA	NA
WP_002294069.1|739468_740161_+	DNA repair protein RadC	NA	NA	NA	NA	NA
WP_002294067.1|740310_740511_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	71.2	3.7e-21
WP_002287948.1|740764_742444_-	ribonuclease J	NA	NA	NA	NA	NA
WP_002287947.1|742445_742658_-	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA	NA
WP_002296290.1|743050_744781_+	multidrug efflux ABC transporter subunit EfrA	NA	W8CYL7	Bacillus_phage	27.6	2.1e-43
WP_002289400.1|744777_746538_+	multidrug efflux ABC transporter subunit EfrB	NA	W8CYL7	Bacillus_phage	28.6	2.5e-52
WP_002296291.1|746632_746830_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002289401.1|746982_747468_+	gamma carbonic anhydrase family protein	NA	NA	NA	NA	NA
WP_002289402.1|747571_748165_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	55.6	8.9e-55
WP_002289403.1|748344_748872_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002289404.1|748962_749700_+	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	40.0	2.3e-12
WP_002289405.1|749703_750621_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_002289406.1|750622_751852_+	GTPase HflX	NA	NA	NA	NA	NA
WP_000222572.1|751885_752839_-|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_002287759.1|753489_755103_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_002296511.1|755243_756152_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002287757.1|756334_757459_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_002287755.1|757685_758603_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_002287754.1|758595_759429_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_002287753.1|759511_760630_+	glycoside hydrolase family 88 protein	NA	NA	NA	NA	NA
WP_002321415.1|760623_762522_+	DUF2264 domain-containing protein	NA	NA	NA	NA	NA
WP_002321414.1|762515_763739_+	glycoside hydrolase family 88 protein	NA	NA	NA	NA	NA
WP_002287747.1|763824_765759_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	31.9	1.1e-58
WP_002287746.1|765984_766641_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_002287745.1|766714_767068_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_002287744.1|767259_768189_+	permease	NA	NA	NA	NA	NA
WP_002287743.1|768199_769036_+	TIGR03943 family protein	NA	NA	NA	NA	NA
WP_002287742.1|769283_770060_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_002287741.1|770235_770979_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	30.9	3.6e-29
WP_002296509.1|770971_772552_+	ABC transporter	NA	NA	NA	NA	NA
WP_002289868.1|772802_773282_-	threonine/serine exporter family protein	NA	NA	NA	NA	NA
WP_002289867.1|773297_774050_-	threonine/serine exporter family protein	NA	NA	NA	NA	NA
WP_002296505.1|774597_775323_+	DNA/RNA non-specific endonuclease	NA	NA	NA	NA	NA
WP_002290885.1|775577_775844_+	IreB family regulatory phosphoprotein	NA	NA	NA	NA	NA
WP_002296503.1|775840_776272_+	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_002290887.1|776296_776602_+	DUF1292 domain-containing protein	NA	NA	NA	NA	NA
776577:776603	attL	CATTCATGGCGGAAGAAGAAGAATAGA	NA	NA	NA	NA
WP_002296502.1|776682_777828_-|integrase	site-specific integrase	integrase	A0A1S5S7K9	Streptococcus_phage	33.3	2.0e-50
WP_002296501.1|777888_778536_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002296500.1|778729_779023_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296499.1|779066_779378_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296496.1|780139_780298_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296495.1|780298_780661_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296494.1|780697_781546_+	bifunctional DNA primase/polymerase	NA	A0A222ZGI2	Arthrobacter_phage	28.3	5.2e-08
WP_002296493.1|781535_783011_+	helicase	NA	Q4ZD27	Staphylococcus_phage	34.9	7.3e-66
WP_002296492.1|783276_783684_+	DUF3206 domain-containing protein	NA	NA	NA	NA	NA
WP_002296491.1|783686_783902_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002304527.1|783905_784286_+	HNH endonuclease	NA	A0A2I7S865	Vibrio_phage	47.9	1.7e-11
WP_002296489.1|784419_784575_+	DUF2292 domain-containing protein	NA	NA	NA	NA	NA
WP_002296488.1|784643_785117_+|terminase	phage terminase small subunit P27 family	terminase	NA	NA	NA	NA
WP_002296487.1|785113_786808_+|terminase	terminase large subunit	terminase	A0A2H4JBN3	uncultured_Caudovirales_phage	43.8	9.1e-129
WP_002317249.1|786773_786959_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296486.1|786962_788138_+|portal	phage portal protein	portal	A0A2H4J5A4	uncultured_Caudovirales_phage	35.6	3.2e-64
WP_002296485.1|788130_789654_+|capsid	phage major capsid protein	capsid	A0A1W6JPR8	Staphylococcus_phage	37.4	1.4e-48
WP_002296484.1|789709_789994_+|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_002296483.1|789980_790316_+|head	phage head closure protein	head	V5UQC7	Enterococcus_phage	35.6	4.7e-13
791385:791411	attR	CATTCATGGCGGAAGAAGAAGAATAGA	NA	NA	NA	NA
>prophage 56
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	805542	819041	2598959		Erysipelothrix_phage(16.67%)	12	NA	NA
WP_002296465.1|805542_806907_+	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.7	9.3e-07
WP_002296464.1|807077_808148_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_002296462.1|808162_808831_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	41.4	1.8e-35
WP_002295080.1|808850_809429_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002295084.1|809831_810743_+	N-acetylmuramoyl-L-alanine amidase	NA	C8CHK8	Thermus_virus	41.1	5.3e-06
WP_002296459.1|810998_811916_-	ribonuclease HIII	NA	NA	NA	NA	NA
WP_002295087.1|812117_812555_+	cell division protein ZapA	NA	NA	NA	NA	NA
WP_002295088.1|812612_813161_+	CvpA family protein	NA	NA	NA	NA	NA
WP_002296458.1|813275_815636_+	endonuclease MutS2	NA	Q94M10	Lactobacillus_phage	50.4	1.7e-24
WP_002290803.1|815722_816037_+	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	40.8	3.6e-15
WP_002296457.1|816218_817997_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_061573464.1|818141_819041_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.3	4.7e-23
>prophage 57
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	839044	840412	2598959		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_002295121.1|839044_840412_-	HD domain-containing protein	NA	A0A1B1ISR1	uncultured_Mediterranean_phage	32.3	1.5e-25
>prophage 58
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	851317	852616	2598959		Streptococcus_phage(100.0%)	1	NA	NA
WP_002292812.1|851317_852616_+	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	81.5	3.6e-194
>prophage 59
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	858631	861475	2598959		Lactococcus_phage(50.0%)	2	NA	NA
WP_002323818.1|858631_860989_+	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	41.7	8.9e-98
WP_002326296.1|861010_861475_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	59.2	7.7e-46
>prophage 60
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	870688	870985	2598959		Staphylococcus_phage(100.0%)	1	NA	NA
WP_002289000.1|870688_870985_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	58.0	3.0e-19
>prophage 61
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	874361	877242	2598959		Streptococcus_phage(100.0%)	4	NA	NA
WP_002303217.1|874361_875006_-	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	50.2	6.0e-49
WP_002294988.1|875132_875420_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002292778.1|875527_875848_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002303218.1|875928_877242_+	DEAD/DEAH box helicase family protein	NA	A0A1X9I5S6	Streptococcus_phage	37.9	1.8e-63
>prophage 62
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	882724	883411	2598959		Bacillus_virus(100.0%)	1	NA	NA
WP_002292768.1|882724_883411_+	cell division ATP-binding protein FtsE	NA	G3M9Y6	Bacillus_virus	25.0	5.5e-16
>prophage 63
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	889015	890596	2598959		Bacillus_virus(100.0%)	2	NA	NA
WP_002289486.1|889015_889822_+	phosphate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.9	4.2e-15
WP_002289489.1|889837_890596_+	phosphate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	27.8	3.9e-15
>prophage 64
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	898972	899911	2598959		Bacillus_phage(100.0%)	1	NA	NA
WP_002289574.1|898972_899911_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	51.2	4.2e-75
>prophage 65
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	906417	907320	2598959		Bodo_saltans_virus(100.0%)	1	NA	NA
WP_002296136.1|906417_907320_+	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	30.0	1.5e-21
>prophage 66
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	911576	915112	2598959		Bacillus_phage(100.0%)	2	NA	NA
WP_002304603.1|911576_913328_+	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	31.2	4.8e-56
WP_002322632.1|913327_915112_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	4.6e-46
>prophage 67
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	922518	931250	2598959		Bacillus_virus(25.0%)	9	NA	NA
WP_002291688.1|922518_923445_+	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	52.8	2.3e-89
WP_002305596.1|923658_925386_+	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	63.0	1.4e-209
WP_002316410.1|925401_925752_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002291694.1|925846_926707_-	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_002287322.1|926798_927227_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_002287321.1|927388_927565_+	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_002291695.1|927591_928038_+	GatB/YqeY domain-containing protein	NA	A0A292GL36	Xanthomonas_phage	38.8	1.6e-19
WP_002303427.1|928193_929573_-	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA	NA
WP_002291698.1|930278_931250_+	PhoH family protein	NA	W8D063	Erwinia_phage	49.8	3.5e-48
>prophage 68
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	939882	941202	2598959	transposase	Streptococcus_phage(100.0%)	1	NA	NA
WP_002323333.1|939882_941202_-|transposase	IS1380-like element IS1678 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	82.7	4.8e-210
>prophage 69
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	944242	944941	2598959		Streptococcus_phage(100.0%)	1	NA	NA
WP_002323214.1|944242_944941_+	CpsD/CapB family tyrosine-protein kinase	NA	A0A1X9I5D6	Streptococcus_phage	38.2	1.3e-25
>prophage 70
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	948346	952306	2598959		Acanthocystis_turfacea_Chlorella_virus(50.0%)	4	NA	NA
WP_002305610.1|948346_949597_+	nucleotide sugar dehydrogenase	NA	M1IB49	Acanthocystis_turfacea_Chlorella_virus	49.9	9.8e-104
WP_002323215.1|949615_950626_+	kinase	NA	NA	NA	NA	NA
WP_002305613.1|950635_951289_+	SIS domain-containing protein	NA	NA	NA	NA	NA
WP_002305614.1|951307_952306_+	NAD-dependent epimerase/dehydratase family protein	NA	E3SJ77	Synechococcus_phage	29.1	7.7e-35
>prophage 71
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	960858	973955	2598959		Synechococcus_phage(50.0%)	12	NA	NA
WP_002305623.1|960858_962496_+	hypothetical protein	NA	B2ZYD9	Ralstonia_phage	26.8	1.2e-19
WP_002305624.1|962597_962993_+	hypothetical protein	NA	M4QRS4	Synechococcus_phage	46.2	4.7e-20
WP_002323221.1|963010_963742_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	A0A222YX14	Synechococcus_phage	33.2	3.7e-26
WP_002305626.1|963765_965217_+	oligosaccharide flippase family protein	NA	NA	NA	NA	NA
WP_002305628.1|965242_965854_+	VanZ family protein	NA	NA	NA	NA	NA
WP_002305629.1|966035_966551_+	dTDP-4-dehydrorhamnose 3,5-epimerase family protein	NA	H9NC63	Sphingomonas_phage	30.5	1.6e-15
WP_002305661.1|966810_967857_+	GDP-mannose 4,6-dehydratase	NA	M4QRT5	Synechococcus_phage	63.1	1.8e-122
WP_002323224.1|967936_968950_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002305663.1|968986_969931_+	GDP-L-fucose synthase	NA	A0A1D8KU05	Synechococcus_phage	53.4	1.5e-93
WP_002305664.1|969998_971312_+	cupin domain-containing protein	NA	A0A1V0SH58	Hokovirus	26.9	2.6e-38
WP_002323227.1|971395_972298_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002305666.1|972302_973955_+	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	40.5	2.6e-104
>prophage 72
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	977070	977265	2598959		Streptococcus_phage(100.0%)	1	NA	NA
WP_002349152.1|977070_977265_+	hypothetical protein	NA	M1PSF2	Streptococcus_phage	72.0	1.1e-14
>prophage 73
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	982672	986548	2598959		Rhodococcus_phage(50.0%)	4	NA	NA
WP_002305673.1|982672_983437_+	RNA methyltransferase	NA	A0A2D1A6G0	Rhodococcus_phage	26.1	1.7e-05
WP_002289559.1|983558_984062_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_002319779.1|984469_985117_+	elongation factor G-binding protein	NA	NA	NA	NA	NA
WP_002323328.1|985279_986548_+	voltage-gated chloride channel family protein	NA	A0A1X9I5Z9	Streptococcus_phage	31.6	2.6e-43
>prophage 74
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	991854	1011094	2598959	tRNA	Streptococcus_phage(28.57%)	15	NA	NA
WP_002294871.1|991854_992055_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	74.2	2.5e-22
WP_002323394.1|992201_994991_+	DEAD/DEAH box helicase family protein	NA	A0A1X9I5C8	Streptococcus_phage	31.0	8.1e-90
WP_002348809.1|995037_995565_+	DUF5590 domain-containing protein	NA	NA	NA	NA	NA
WP_002296294.1|995585_996776_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_002301945.1|996815_998114_+|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	30.5	6.9e-60
WP_002301946.1|999042_999717_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_002319756.1|999713_1000055_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288776.1|1000084_1000444_+	YccF domain-containing protein	NA	NA	NA	NA	NA
WP_002323533.1|1000968_1003050_+	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	35.7	8.3e-116
WP_002288779.1|1003360_1004827_+	amino acid permease	NA	NA	NA	NA	NA
WP_002289037.1|1005441_1005981_+	transcriptional regulator	NA	A0A097BYE2	Leuconostoc_phage	34.5	3.8e-20
WP_002294855.1|1006054_1006495_+	CopY/TcrY family copper transport repressor	NA	NA	NA	NA	NA
WP_002337817.1|1006507_1006717_+	copper chaperone CopZ	NA	NA	NA	NA	NA
WP_061573465.1|1006716_1008903_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	38.6	4.1e-121
WP_002327341.1|1008922_1011094_+	copper/silver-translocating P-type ATPase CopB	NA	A0A218MNH6	uncultured_virus	32.3	5.0e-71
>prophage 75
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1021159	1031912	2598959	transposase	Bacillus_phage(40.0%)	10	NA	NA
WP_002319273.1|1021159_1023631_+	cation-translocating P-type ATPase	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	29.2	5.4e-45
WP_061573469.1|1023733_1025470_-	sensor histidine kinase	NA	W8CYF6	Bacillus_phage	34.1	1.2e-27
WP_002293705.1|1025466_1026171_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	36.2	1.4e-38
WP_002297194.1|1026301_1026805_+	DUF523 domain-containing protein	NA	NA	NA	NA	NA
WP_002293708.1|1026764_1027103_+	putative DNA-binding protein	NA	NA	NA	NA	NA
WP_002293709.1|1027123_1028542_+	signal recognition particle protein	NA	NA	NA	NA	NA
WP_002297218.1|1028659_1029955_-|transposase	ISL3-like element ISEfa11 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	20.9	2.1e-08
WP_002293710.1|1030175_1030754_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_002297192.1|1030757_1031279_+	dihydrofolate reductase	NA	NA	NA	NA	NA
WP_002293714.1|1031357_1031912_-	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	29.3	2.3e-12
>prophage 76
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1057826	1067642	2598959	tRNA	Streptococcus_phage(50.0%)	9	NA	NA
WP_061573477.1|1057826_1058543_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.7	1.0e-33
WP_002322837.1|1058542_1059991_+	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.3	1.7e-19
WP_002288586.1|1060060_1060570_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061573478.1|1060559_1061285_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002325787.1|1061507_1063628_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	58.1	4.8e-220
WP_002322842.1|1063857_1065036_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	48.9	5.1e-102
WP_002293935.1|1065051_1065810_+	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	36.9	8.5e-26
WP_002288577.1|1065832_1066318_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_002288576.1|1066388_1067642_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	55.3	7.7e-24
>prophage 77
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1070668	1080257	2598959	integrase,transposase	Listeria_phage(42.86%)	13	1068833:1068846	1078936:1078949
1068833:1068846	attL	GTTCTTCATGAAGC	NA	NA	NA	NA
WP_061573479.1|1070668_1071892_-|integrase	site-specific integrase	integrase	A0A0P0I3D2	Lactobacillus_phage	43.0	1.1e-80
WP_061573480.1|1072070_1073018_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010728285.1|1073140_1073707_-	DUF5067 domain-containing protein	NA	NA	NA	NA	NA
WP_061573481.1|1073843_1074533_-	SHOCT domain-containing protein	NA	X5JB37	Clostridium_phage	47.3	5.0e-25
WP_010732289.1|1074592_1075060_-	ImmA/IrrE family metallo-endopeptidase	NA	R4IBK9	Listeria_phage	38.0	3.5e-22
WP_061573482.1|1075070_1075397_-	helix-turn-helix transcriptional regulator	NA	A8ATJ9	Listeria_phage	58.2	1.3e-18
WP_038398690.1|1075568_1075793_+	helix-turn-helix transcriptional regulator	NA	A8ATK0	Listeria_phage	62.7	4.6e-12
WP_162846314.1|1075789_1075942_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038398692.1|1076004_1076559_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086956687.1|1076765_1077927_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	51.3	1.6e-79
WP_002305693.1|1078199_1078631_+	DUF4231 domain-containing protein	NA	NA	NA	NA	NA
WP_002295273.1|1078862_1079120_-	hypothetical protein	NA	NA	NA	NA	NA
1078936:1078949	attR	GCTTCATGAAGAAC	NA	NA	NA	NA
WP_002287105.1|1079282_1080257_+	choloylglycine hydrolase family protein	NA	M1HVK5	Paramecium_bursaria_Chlorella_virus	31.8	5.4e-25
>prophage 78
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1085095	1087615	2598959		Staphylococcus_phage(50.0%)	2	NA	NA
WP_002287775.1|1085095_1086895_-	glycerophosphoryl diester phosphodiesterase membrane domain-containing protein	NA	I6XE30	Staphylococcus_phage	26.5	5.3e-10
WP_002287776.1|1087018_1087615_-	TVP38/TMEM64 family protein	NA	M1Q152	Streptococcus_phage	41.7	8.7e-34
>prophage 79
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1091855	1098679	2598959		Paramecium_bursaria_Chlorella_virus(25.0%)	7	NA	NA
WP_002317802.1|1091855_1092830_+	choloylglycine hydrolase family protein	NA	M1H001	Paramecium_bursaria_Chlorella_virus	29.7	6.6e-23
WP_002323439.1|1093154_1095050_+	asparagine synthase (glutamine-hydrolyzing)	NA	F2Y2L7	Organic_Lake_phycodnavirus	26.2	6.0e-20
WP_002288531.1|1095244_1095691_-	DUF2188 domain-containing protein	NA	NA	NA	NA	NA
WP_002296119.1|1095918_1096068_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_002296121.1|1096155_1096674_+	dihydrofolate reductase	NA	G3MBI7	Bacillus_virus	39.1	7.1e-24
WP_002293906.1|1096750_1097707_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002293905.1|1097872_1098679_+	ABC transporter ATP-binding protein	NA	A0A1V0SJ29	Klosneuvirus	32.1	1.0e-13
>prophage 80
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1106480	1112893	2598959	tRNA	Hokovirus(33.33%)	7	NA	NA
WP_061573486.1|1106480_1107470_+	UDP-glucose 4-epimerase GalE	NA	A0A1V0SG19	Hokovirus	36.8	3.5e-48
WP_061573487.1|1107481_1108966_+	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
WP_061573488.1|1108989_1109970_+	LacI family DNA-binding transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	28.9	7.6e-19
WP_002318999.1|1110058_1110883_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
WP_061573489.1|1110866_1111409_+	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA	NA
WP_002293888.1|1111415_1111880_+	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA	NA
WP_061573490.1|1111876_1112893_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	41.4	7.1e-60
>prophage 81
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1118483	1120175	2598959	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_002326914.1|1118483_1120175_+|tRNA	arginine--tRNA ligase	tRNA	A0A2I2L3K1	Orpheovirus	32.8	1.3e-74
>prophage 82
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1126821	1127634	2598959		Flavobacterium_phage(100.0%)	1	NA	NA
WP_002294134.1|1126821_1127634_+	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	46.8	2.0e-25
>prophage 83
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1131848	1140958	2598959		Clostridium_phage(50.0%)	6	NA	NA
WP_061573491.1|1131848_1136201_+	PolC-type DNA polymerase III	NA	A0A0K2SUJ2	Clostridium_phage	41.4	3.9e-22
WP_002326917.1|1136344_1136818_+	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_002319370.1|1136840_1138016_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_002288501.1|1138037_1138331_+	YlxR family protein	NA	NA	NA	NA	NA
WP_002288509.1|1138327_1138639_+	YlxQ-related RNA-binding protein	NA	NA	NA	NA	NA
WP_002294141.1|1138651_1140958_+	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	23.7	3.6e-19
>prophage 84
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1155980	1166246	2598959	transposase	Chrysochromulina_ericina_virus(40.0%)	9	NA	NA
WP_148654932.1|1155980_1157143_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	51.3	1.6e-79
WP_061573496.1|1157213_1157615_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_061573497.1|1158600_1158828_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002326924.1|1158843_1160010_+	oxygen-independent coproporphyrinogen III oxidase	NA	A0A0N7G7K6	Chrysochromulina_ericina_virus	33.6	5.0e-09
WP_002326925.1|1160244_1161288_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA	NA
WP_061573498.1|1161381_1161945_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_002292134.1|1161995_1163825_+	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	48.8	2.2e-136
WP_002289374.1|1163975_1165142_+	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	25.7	1.9e-24
WP_002292113.1|1165508_1166246_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	44.7	2.8e-34
>prophage 85
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1170012	1178075	2598959		Streptococcus_phage(50.0%)	6	NA	NA
WP_002326928.1|1170012_1172829_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	57.5	1.0e-311
WP_061573499.1|1173091_1174357_+	D-aspartate ligase	NA	NA	NA	NA	NA
WP_061573500.1|1174360_1175083_+	aspartate racemase	NA	NA	NA	NA	NA
WP_002289695.1|1175226_1176111_+	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	31.4	5.4e-08
WP_002306471.1|1176107_1177106_+	YvcK family protein	NA	A1IMD5	Streptococcus_phage	62.9	4.4e-115
WP_002289698.1|1177139_1178075_+	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.1	2.0e-53
>prophage 86
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1188847	1192390	2598959		Paramecium_bursaria_Chlorella_virus(50.0%)	3	NA	NA
WP_002326936.1|1188847_1190653_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	38.7	1.3e-96
WP_002326937.1|1191061_1191352_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002324980.1|1191364_1192390_+	signal peptide peptidase SppA	NA	A0A2I6UH21	Salinibacter_virus	33.1	3.2e-20
>prophage 87
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1195830	1197081	2598959	protease	Bacillus_virus(100.0%)	1	NA	NA
WP_002294425.1|1195830_1197081_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	62.5	5.5e-147
>prophage 88
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1205258	1209546	2598959		Bacillus_phage(50.0%)	2	NA	NA
WP_002319708.1|1205258_1207493_+	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	40.1	9.5e-126
WP_002323115.1|1207509_1209546_+	NAD-dependent DNA ligase LigA	NA	A0A289ZTZ3	Serratia_phage	37.1	4.8e-100
>prophage 89
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1212865	1217255	2598959		Catovirus(25.0%)	4	NA	NA
WP_002326946.1|1212865_1213921_+	diacylglycerol kinase	NA	A0A1V0SBJ0	Catovirus	27.7	8.5e-16
WP_002323988.1|1214031_1215405_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	D0R096	Streptococcus_phage	55.9	2.5e-140
WP_061573548.1|1215978_1216164_+	hypothetical protein	NA	A0A218MNE0	uncultured_virus	50.9	2.8e-07
WP_002296415.1|1216241_1217255_+	alpha/beta hydrolase	NA	M1PGN2	Moumouvirus	23.3	7.9e-11
>prophage 90
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1220713	1222597	2598959		Herpes_simplex_virus(100.0%)	1	NA	NA
WP_061573507.1|1220713_1222597_+	beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	34.5	1.4e-98
>prophage 91
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1226331	1227498	2598959		Pandoravirus(100.0%)	1	NA	NA
WP_002323995.1|1226331_1227498_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	35.3	2.1e-39
>prophage 92
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1231311	1233048	2598959		Enterobacteria_phage(100.0%)	1	NA	NA
WP_002289136.1|1231311_1233048_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	30.6	5.0e-21
>prophage 93
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1246952	1247684	2598959		Bacillus_phage(100.0%)	1	NA	NA
WP_002296404.1|1246952_1247684_+	serine/threonine protein phosphatase	NA	A7KV25	Bacillus_phage	30.8	1.7e-15
>prophage 94
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1254345	1257872	2598959		Bacillus_phage(100.0%)	2	NA	NA
WP_002296395.1|1254345_1256991_+	DNA polymerase I	NA	F8WQ35	Bacillus_phage	35.7	3.0e-54
WP_002288323.1|1257035_1257872_+	DNA-formamidopyrimidine glycosylase	NA	A0A127AWE5	Bacillus_phage	30.2	1.8e-24
>prophage 95
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1261047	1293727	2598959	integrase,transposase,tRNA,protease	Streptococcus_phage(20.0%)	29	1262561:1262578	1297252:1297269
WP_002288331.1|1261047_1261974_+	primosomal protein DnaI	NA	S5MU12	Brevibacillus_phage	41.3	5.1e-33
WP_002288333.1|1262102_1262543_+	lipoprotein	NA	NA	NA	NA	NA
1262561:1262578	attL	AAAATAAGAAAATGTTGT	NA	NA	NA	NA
WP_002297185.1|1262708_1264004_-|transposase	ISL3-like element ISEfa5 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	21.4	3.8e-10
WP_002288335.1|1264209_1264911_+|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_002288338.1|1264907_1266029_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_002288340.1|1266043_1267276_+	peptidase T	NA	NA	NA	NA	NA
WP_002288343.1|1267407_1268316_+	YegS/Rv2252/BmrU family lipid kinase	NA	NA	NA	NA	NA
WP_002288344.1|1268350_1268623_+	DUF1294 domain-containing protein	NA	NA	NA	NA	NA
WP_002288347.1|1268633_1269680_+	flippase-like domain-containing protein	NA	NA	NA	NA	NA
WP_002288348.1|1269930_1272540_+	ATP-dependent chaperone ClpB	NA	A0A2I7SAX5	Vibrio_phage	35.0	1.6e-132
WP_002321495.1|1272690_1273377_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002288352.1|1273354_1273849_-	nucleoside deoxyribosyltransferase	NA	A0A1W6JK28	Lactococcus_phage	56.5	7.2e-42
WP_061573509.1|1273868_1275089_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002288355.1|1275235_1277071_+	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	24.4	3.4e-20
WP_002288357.1|1277164_1278292_-|integrase	site-specific integrase	integrase	A0A2I7SCV1	Paenibacillus_phage	55.5	1.8e-109
WP_000222572.1|1278348_1279302_+|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_000997695.1|1279457_1280636_-|transposase	IS256-like element ISEf1 family transposase	transposase	NA	NA	NA	NA
WP_002289415.1|1281686_1282100_-	Hsp20/alpha crystallin family protein	NA	A0A1B2LRT2	Wolbachia_phage	31.5	2.1e-07
WP_002303864.1|1282555_1283041_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002289418.1|1283179_1283395_-	DUF378 domain-containing protein	NA	NA	NA	NA	NA
WP_002289420.1|1283618_1284419_+	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	26.2	2.6e-09
WP_002289421.1|1284437_1286306_+	HTH domain-containing protein	NA	NA	NA	NA	NA
WP_002289422.1|1286298_1286790_+	DeoR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002289423.1|1286777_1287332_+	PTS glucitol/sorbitol transporter subunit IIC	NA	NA	NA	NA	NA
WP_002287107.1|1288485_1289736_-|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	63.3	4.0e-113
WP_002296624.1|1290144_1290543_+	PTS glucitol/sorbitol transporter subunit IIA	NA	NA	NA	NA	NA
WP_002311093.1|1290526_1291222_+	fructose-6-phosphate aldolase	NA	E3SKN5	Synechococcus_phage	31.5	1.0e-22
WP_002296627.1|1291815_1292703_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_061573510.1|1292887_1293727_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
1297252:1297269	attR	AAAATAAGAAAATGTTGT	NA	NA	NA	NA
>prophage 96
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1300993	1305966	2598959		Moumouvirus(33.33%)	5	NA	NA
WP_002296637.1|1300993_1301995_+	alpha/beta hydrolase	NA	M1PGN2	Moumouvirus	31.8	2.5e-09
WP_002296638.1|1302196_1302403_-	DUF3955 domain-containing protein	NA	NA	NA	NA	NA
WP_002296639.1|1303048_1303897_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002321675.1|1303895_1304963_+	decarboxylating 6-phosphogluconate dehydrogenase	NA	A0A1D8KGX1	Synechococcus_phage	35.3	3.9e-53
WP_002296641.1|1304964_1305966_+	2-hydroxyacid dehydrogenase	NA	M1H9J0	Paramecium_bursaria_Chlorella_virus	29.0	2.8e-24
>prophage 97
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1311804	1313470	2598959		Synechococcus_phage(50.0%)	3	NA	NA
WP_002296656.1|1311804_1312518_+	HAD family phosphatase	NA	A0A1D8KPI1	Synechococcus_phage	23.0	5.4e-06
WP_002296658.1|1312724_1312874_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002293303.1|1313269_1313470_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	77.3	3.9e-23
>prophage 98
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1318483	1322562	2598959		Archaeal_BJ1_virus(50.0%)	5	NA	NA
WP_002296670.1|1318483_1319341_+	glycosyltransferase family 8 protein	NA	A0ZYL4	Archaeal_BJ1_virus	27.1	1.3e-19
WP_002296671.1|1319333_1320236_+	glycosyltransferase family 8 protein	NA	NA	NA	NA	NA
WP_002296672.1|1320268_1320619_+	iron-sulfur cluster biosynthesis family protein	NA	NA	NA	NA	NA
WP_002303839.1|1320667_1321591_+	magnesium transporter CorA family protein	NA	NA	NA	NA	NA
WP_002296675.1|1321668_1322562_+	SDR family oxidoreductase	NA	A0A2N9QUX2	Trichoplusia_ni_ascovirus	46.0	8.9e-59
>prophage 99
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1346470	1348000	2598959		Enterococcus_phage(100.0%)	1	NA	NA
WP_002288179.1|1346470_1348000_-	alkyl hydroperoxide reductase subunit F	NA	A0A249XZT7	Enterococcus_phage	33.0	3.9e-38
>prophage 100
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1365960	1369032	2598959		Tupanvirus(50.0%)	3	NA	NA
WP_002295921.1|1365960_1367127_+	class I SAM-dependent methyltransferase	NA	A0A2K9L4K8	Tupanvirus	39.3	1.6e-47
WP_002295919.1|1367356_1368004_+	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_002295918.1|1368087_1369032_+	dihydroorotate oxidase	NA	A0A1V0SH91	Hokovirus	44.4	5.2e-65
>prophage 101
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1372259	1375271	2598959		Bacillus_phage(50.0%)	4	NA	NA
WP_002303824.1|1372259_1372949_+	hypothetical protein	NA	U5PU21	Bacillus_phage	36.5	3.7e-20
WP_002295913.1|1372954_1373911_+	sce7725 family protein	NA	NA	NA	NA	NA
WP_002295912.1|1373954_1374467_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002295911.1|1374722_1375271_-	AAA family ATPase	NA	S4W1R9	Pandoravirus	29.4	3.3e-11
>prophage 102
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1386103	1388366	2598959	transposase	Staphylococcus_phage(50.0%)	2	NA	NA
WP_002286075.1|1386103_1386952_+	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	37.4	9.8e-15
WP_002296623.1|1387070_1388366_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	37.5	3.9e-55
>prophage 103
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1401148	1403810	2598959		Bacillus_phage(50.0%)	3	NA	NA
WP_002311113.1|1401148_1401823_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.3	1.9e-29
WP_002311114.1|1402044_1403118_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_002286060.1|1403123_1403810_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.0	1.9e-29
>prophage 104
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1427996	1430225	2598959		Streptococcus_phage(100.0%)	1	NA	NA
WP_002322737.1|1427996_1430225_-	type IA DNA topoisomerase	NA	A0A1X9I6W8	Streptococcus_phage	52.6	1.6e-128
>prophage 105
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1433399	1434170	2598959		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_002289629.1|1433399_1434170_-	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.3	9.6e-09
>prophage 106
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1449206	1455508	2598959		Halovirus(25.0%)	6	NA	NA
WP_002288877.1|1449206_1450283_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	36.4	5.2e-61
WP_002288875.1|1450287_1451568_-	dihydroorotase	NA	NA	NA	NA	NA
WP_002288872.1|1451586_1452513_-	aspartate carbamoyltransferase catalytic subunit	NA	M1HWF9	Paramecium_bursaria_Chlorella_virus	33.0	3.6e-26
WP_002288870.1|1452525_1453809_-	uracil transporter	NA	Q9KX94	Enterobacteria_phage	37.3	3.2e-65
WP_002295862.1|1453822_1454362_-	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA	NA
WP_002295861.1|1454596_1455508_-	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	29.1	2.4e-11
>prophage 107
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1459044	1459278	2598959		Lactococcus_phage(100.0%)	1	NA	NA
WP_002303804.1|1459044_1459278_+	cold shock domain-containing protein	NA	Q9AZD3	Lactococcus_phage	49.2	5.6e-13
>prophage 108
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1462403	1467259	2598959	tRNA	Tupanvirus(50.0%)	3	NA	NA
WP_002296111.1|1462403_1465046_-|tRNA	alanine--tRNA ligase	tRNA	A0A2K9L3D8	Tupanvirus	34.4	9.7e-69
WP_002289191.1|1465433_1465865_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002377999.1|1465909_1467259_-	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	31.7	1.4e-50
>prophage 109
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1471599	1474118	2598959		Emiliania_huxleyi_virus(50.0%)	2	NA	NA
WP_002289186.1|1471599_1472790_-	glycine C-acetyltransferase	NA	D2TEZ5	Emiliania_huxleyi_virus	33.3	3.7e-52
WP_002289185.1|1473434_1474118_-	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	29.9	2.5e-13
>prophage 110
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1478616	1479264	2598959		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_002289604.1|1478616_1479264_+	Holliday junction resolvase RecU	NA	A0A2H4J3A4	uncultured_Caudovirales_phage	37.5	1.7e-22
>prophage 111
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1483274	1483973	2598959		Bacillus_phage(100.0%)	1	NA	NA
WP_002289610.1|1483274_1483973_-	DnaD domain protein	NA	A0A0N7AE27	Bacillus_phage	42.5	4.9e-12
>prophage 112
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1488864	1490818	2598959		Streptococcus_phage(50.0%)	2	NA	NA
WP_002296093.1|1488864_1489791_-	cysteine synthase A	NA	A0A1X9I5K7	Streptococcus_phage	57.2	2.7e-98
WP_002295819.1|1489930_1490818_-	glucosaminidase domain-containing protein	NA	A0A0K2CP65	Brevibacillus_phage	43.2	4.5e-18
>prophage 113
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1494627	1498761	2598959		Phage_Wrath(33.33%)	4	NA	NA
WP_002296572.1|1494627_1495251_+	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	59.4	2.2e-16
WP_002297436.1|1495430_1495649_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002295813.1|1495937_1496450_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.6	2.4e-32
WP_002296571.1|1496463_1498761_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	33.9	1.3e-80
>prophage 114
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1504753	1508964	2598959	transposase	Pithovirus(50.0%)	4	NA	NA
WP_002289735.1|1504753_1505689_-	alpha/beta hydrolase	NA	W5S4D8	Pithovirus	25.4	2.0e-05
WP_002303791.1|1505874_1506834_+|transposase	IS30-like element IS6770 family transposase	transposase	NA	NA	NA	NA
WP_002295800.1|1506919_1508014_-	DUF871 domain-containing protein	NA	NA	NA	NA	NA
WP_002296283.1|1508202_1508964_+	peptidylprolyl isomerase	NA	A0A1V0S9I2	Catovirus	38.0	6.7e-23
>prophage 115
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1512839	1516985	2598959	transposase	Lysinibacillus_phage(50.0%)	4	NA	NA
WP_002297185.1|1512839_1514135_+|transposase	ISL3-like element ISEfa5 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	21.4	3.8e-10
WP_002295789.1|1514503_1515004_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_002288030.1|1515110_1515629_-	metallophosphoesterase	NA	NA	NA	NA	NA
WP_061573514.1|1515629_1516985_-	ribonuclease PH	NA	A0A0P0A2M4	Ugandan_cassava_brown_streak_virus	30.4	1.6e-14
>prophage 116
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1520131	1520869	2598959		Planktothrix_phage(100.0%)	1	NA	NA
WP_002296877.1|1520131_1520869_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.6	7.7e-32
>prophage 117
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1524727	1530212	2598959	tRNA	Orpheovirus(50.0%)	3	NA	NA
WP_002295783.1|1524727_1525771_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	33.6	1.9e-31
WP_002303789.1|1526079_1526421_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002296885.1|1526489_1530212_-	helicase-exonuclease AddAB subunit AddA	NA	S5MMD7	Bacillus_phage	23.3	2.7e-24
>prophage 118
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1534006	1536941	2598959	transposase	Lysinibacillus_phage(50.0%)	2	NA	NA
WP_002297218.1|1534006_1535302_+|transposase	ISL3-like element ISEfa11 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	20.9	2.1e-08
WP_002288052.1|1535474_1536941_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	38.6	3.4e-87
>prophage 119
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1543834	1547516	2598959		Enterococcus_phage(50.0%)	4	NA	NA
WP_002289111.1|1543834_1544473_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A249XZV3	Enterococcus_phage	53.6	4.9e-35
WP_002297227.1|1545407_1545908_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002289113.1|1546097_1546442_-	metal-sulfur cluster assembly factor	NA	NA	NA	NA	NA
WP_002289114.1|1546595_1547516_-	YitT family protein	NA	M1Q1P6	Streptococcus_phage	30.0	1.3e-23
>prophage 120
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1550918	1555422	2598959		Streptococcus_phage(100.0%)	4	NA	NA
WP_002289118.1|1550918_1551545_+	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	50.5	5.3e-50
WP_002289120.1|1551567_1552272_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_002289121.1|1552463_1553297_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_002289122.1|1553493_1555422_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	38.5	4.2e-106
>prophage 121
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1558580	1561386	2598959		Clostridium_botulinum_C_phage(50.0%)	2	NA	NA
WP_002322120.1|1558580_1560854_-	DNA internalization-related competence protein ComEC/Rec2	NA	Q332C0	Clostridium_botulinum_C_phage	31.3	1.3e-32
WP_002295503.1|1560846_1561386_-	ComE operon protein 2	NA	A7KUY9	Bacillus_phage	58.3	5.4e-35
>prophage 122
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1572113	1573886	2598959		Acanthamoeba_polyphaga_mimivirus(100.0%)	1	NA	NA
WP_002288736.1|1572113_1573886_-	DNA helicase RecQ	NA	A0A0G2Y8K9	Acanthamoeba_polyphaga_mimivirus	37.3	3.6e-83
>prophage 123
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1577353	1578760	2598959		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_002289686.1|1577353_1578760_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.5	2.8e-46
>prophage 124
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1582985	1610233	2598959	transposase	Prochlorococcus_phage(15.38%)	23	NA	NA
WP_002297114.1|1582985_1584410_-	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	24.1	1.1e-18
WP_002287992.1|1584673_1585651_-	GMP reductase	NA	G3MBI2	Bacillus_virus	80.4	2.7e-149
WP_002287993.1|1585907_1587113_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_002287995.1|1587114_1588641_-	sugar ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	30.1	8.2e-12
WP_002287997.1|1588694_1589783_-	sugar-binding protein	NA	NA	NA	NA	NA
WP_002287999.1|1590002_1591019_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002288002.1|1591032_1592484_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	29.1	4.1e-21
WP_002288004.1|1592476_1594042_+	response regulator	NA	NA	NA	NA	NA
WP_002297218.1|1594236_1595532_+|transposase	ISL3-like element ISEfa11 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	20.9	2.1e-08
WP_002288005.1|1595696_1596611_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_002288007.1|1596732_1598007_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_002288009.1|1598022_1599558_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	48.9	1.2e-74
WP_002288010.1|1599554_1600133_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	37.4	1.3e-26
WP_002288011.1|1600129_1601182_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SE90	Cyanophage	43.7	2.7e-62
WP_002288013.1|1601204_1602644_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.1	5.3e-53
WP_002288015.1|1602628_1604851_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.3	1.9e-150
WP_002288017.1|1604851_1605523_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_002295474.1|1605524_1605779_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_002288021.1|1605778_1606507_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	E3SPA9	Prochlorococcus_phage	41.4	4.6e-45
WP_002297115.1|1606762_1607140_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288023.1|1607319_1608615_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	33.1	4.5e-19
WP_002288025.1|1608627_1609752_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_002303771.1|1609744_1610233_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.7	1.9e-23
>prophage 125
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1619449	1620067	2598959		Clostridium_botulinum_C_phage(100.0%)	1	NA	NA
WP_002295461.1|1619449_1620067_-	glycoside hydrolase family 73 protein	NA	Q332B8	Clostridium_botulinum_C_phage	41.1	3.4e-25
>prophage 126
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1629287	1630322	2598959		Brazilian_cedratvirus(100.0%)	1	NA	NA
WP_002321171.1|1629287_1630322_-	lactate dehydrogenase	NA	A0A2R8FDS8	Brazilian_cedratvirus	34.3	1.1e-23
>prophage 127
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1640786	1641410	2598959		Enterococcus_phage(100.0%)	1	NA	NA
WP_002326685.1|1640786_1641410_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A249XZV3	Enterococcus_phage	56.4	3.9e-37
>prophage 128
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1646254	1647220	2598959		Planktothrix_phage(100.0%)	1	NA	NA
WP_002289763.1|1646254_1647220_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.9	2.0e-27
>prophage 129
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1658594	1665610	2598959		Bacillus_virus(66.67%)	3	NA	NA
WP_002289265.1|1658594_1660826_-	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	42.5	2.4e-169
WP_002296998.1|1661102_1663553_-	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.6	7.1e-98
WP_002303746.1|1663564_1665610_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	41.3	2.4e-115
>prophage 130
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1668872	1677200	2598959	protease,tRNA	Erwinia_phage(25.0%)	7	NA	NA
WP_002288421.1|1668872_1670273_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A173GFL6	Erwinia_phage	28.8	1.7e-43
WP_002288419.1|1670286_1670835_-	HslU--HslV peptidase proteolytic subunit	NA	NA	NA	NA	NA
WP_002288415.1|1670871_1671777_-	tyrosine recombinase XerC	NA	A0A0K2CP59	Brevibacillus_phage	29.4	9.4e-32
WP_002320953.1|1671974_1673351_-|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_002288411.1|1673319_1675398_-	type I DNA topoisomerase	NA	A0A167R9A0	Powai_lake_megavirus	38.5	1.2e-101
WP_002303743.1|1675519_1676377_-	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_002296990.1|1676432_1677200_-	ribonuclease HII	NA	D2TEQ2	Emiliania_huxleyi_virus	39.5	2.7e-27
>prophage 131
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1682807	1687890	2598959		Staphylococcus_phage(50.0%)	5	NA	NA
WP_002288394.1|1682807_1683650_-	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	40.2	6.5e-19
WP_002288393.1|1683781_1684435_+	hemolysin III family protein	NA	NA	NA	NA	NA
WP_002288392.1|1684497_1685025_-	dihydrofolate reductase	NA	A0A1D6X864	Bacillus_phage	37.1	6.7e-22
WP_002294416.1|1685044_1685992_-	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	64.6	7.1e-123
WP_002288390.1|1686003_1687890_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	29.8	2.6e-52
>prophage 132
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1691386	1694062	2598959	tRNA	unidentified_phage(50.0%)	3	NA	NA
WP_002294414.1|1691386_1692595_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	51.7	1.5e-45
WP_002290045.1|1692706_1693039_-	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_002294412.1|1693186_1694062_+	YitT family protein	NA	M1Q1P6	Streptococcus_phage	45.3	5.9e-63
>prophage 133
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1697272	1697548	2598959		Geobacillus_virus(100.0%)	1	NA	NA
WP_002290178.1|1697272_1697548_-	HU family DNA-binding protein	NA	A0A0H3UZA0	Geobacillus_virus	69.7	1.8e-26
>prophage 134
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1702076	1703480	2598959		Acanthamoeba_polyphaga_mimivirus(100.0%)	1	NA	NA
WP_002311164.1|1702076_1703480_-	ATP-dependent DNA helicase RecQ	NA	A0A0G2Y8K9	Acanthamoeba_polyphaga_mimivirus	35.5	6.5e-64
>prophage 135
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1710945	1713543	2598959		uncultured_Mediterranean_phage(66.67%)	4	NA	NA
WP_002296975.1|1710945_1711515_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	32.7	1.5e-14
WP_002296973.1|1711498_1712296_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	25.0	1.1e-07
WP_002294387.1|1712265_1712637_-	protein RibT	NA	NA	NA	NA	NA
WP_002294386.1|1712655_1713543_-	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	29.7	1.2e-31
>prophage 136
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1717594	1723066	2598959		Synechococcus_phage(33.33%)	3	NA	NA
WP_002289498.1|1717594_1718704_-	RNA polymerase sigma factor RpoD	NA	F4YCU2	Synechococcus_phage	38.9	9.8e-39
WP_002289497.1|1718727_1720569_-	DNA primase	NA	A0A1S5RH70	Helicobacter_phage	32.1	1.2e-49
WP_002303731.1|1720750_1723066_-	cation-translocating P-type ATPase	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	26.2	9.2e-39
>prophage 137
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1728534	1732708	2598959		Aureococcus_anophage(50.0%)	4	NA	NA
WP_002289463.1|1728534_1729722_-	elongation factor Tu	NA	A0A076FFS6	Aureococcus_anophage	28.5	1.3e-33
WP_002289464.1|1730089_1730446_+	YxeA family protein	NA	NA	NA	NA	NA
WP_002294378.1|1730686_1731691_-	nucleoid-associated protein	NA	NA	NA	NA	NA
WP_002289273.1|1731856_1732708_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	41.4	1.4e-53
>prophage 138
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1739108	1741775	2598959		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_002294372.1|1739108_1741775_-	cation-translocating P-type ATPase	NA	M1HJQ2	Paramecium_bursaria_Chlorella_virus	30.1	1.6e-82
>prophage 139
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1757233	1758025	2598959		Escherichia_phage(100.0%)	1	NA	NA
WP_002288287.1|1757233_1758025_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	29.4	1.4e-18
>prophage 140
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1762403	1762826	2598959		Staphylococcus_phage(100.0%)	1	NA	NA
WP_002288294.1|1762403_1762826_+	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	48.9	2.0e-29
>prophage 141
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1772929	1774180	2598959	transposase	Streptococcus_phage(100.0%)	1	NA	NA
WP_002287107.1|1772929_1774180_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	63.3	4.0e-113
>prophage 142
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1797203	1798499	2598959	transposase	Lysinibacillus_phage(100.0%)	1	NA	NA
WP_002297185.1|1797203_1798499_+|transposase	ISL3-like element ISEfa5 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	21.4	3.8e-10
>prophage 143
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1805876	1809679	2598959		Ectocarpus_siliculosus_virus(33.33%)	3	NA	NA
WP_002298265.1|1805876_1807382_-	HAMP domain-containing histidine kinase	NA	Q8QNA2	Ectocarpus_siliculosus_virus	25.1	3.9e-06
WP_002290973.1|1807378_1808065_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	31.2	4.8e-28
WP_002295350.1|1808257_1809679_-	NADP-dependent phosphogluconate dehydrogenase	NA	A0A1D8KPW3	Synechococcus_phage	31.1	4.2e-34
>prophage 144
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1814765	1823937	2598959	transposase	Streptomyces_phage(33.33%)	6	NA	NA
WP_002311576.1|1814765_1818080_-	DNA polymerase III subunit alpha	NA	R4TB75	Streptomyces_phage	33.0	1.8e-149
WP_002295359.1|1818310_1818496_+	YjzD family protein	NA	NA	NA	NA	NA
WP_002290958.1|1818557_1819754_-	multidrug efflux MFS transporter	NA	NA	NA	NA	NA
WP_002295362.1|1819923_1821360_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	29.0	3.8e-43
WP_002296740.1|1821652_1822462_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_061573519.1|1822641_1823937_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	37.2	2.5e-54
>prophage 145
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1827677	1832004	2598959	tRNA	Tupanvirus(50.0%)	3	NA	NA
WP_002287651.1|1827677_1829618_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	35.2	3.3e-114
WP_002287649.1|1829954_1830134_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_002287647.1|1830180_1832004_-	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	29.1	6.5e-64
>prophage 146
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1839398	1840049	2598959		Bacillus_virus(100.0%)	1	NA	NA
WP_002287632.1|1839398_1840049_-	nicotinate-nucleotide adenylyltransferase	NA	G3MA22	Bacillus_virus	33.2	4.9e-22
>prophage 147
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1847410	1848148	2598959		Trichoplusia_ni_ascovirus(100.0%)	1	NA	NA
WP_002287617.1|1847410_1848148_-	3-oxoacyl-[acyl-carrier-protein] reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	29.7	4.1e-17
>prophage 148
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1855942	1863324	2598959	protease	Hokovirus(33.33%)	6	NA	NA
WP_002287603.1|1855942_1857670_-	phosphoenolpyruvate--protein phosphotransferase	NA	A0A1V0SGR7	Hokovirus	35.9	9.3e-20
WP_002287602.1|1857669_1857936_-	phosphocarrier protein HPr	NA	NA	NA	NA	NA
WP_002287598.1|1858414_1860649_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A223W0B1	Agrobacterium_phage	39.1	5.1e-127
WP_002290825.1|1860796_1861117_+	DUF1827 family protein	NA	NA	NA	NA	NA
WP_002287661.1|1861321_1861546_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002295394.1|1861743_1863324_-	peptide chain release factor 3	NA	A0A1B0RXH7	Streptococcus_phage	28.4	5.1e-33
>prophage 149
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1869702	1965433	2598959	transposase,head,terminase,integrase,holin,protease,portal,tail,capsid	Enterococcus_phage(22.22%)	112	1912168:1912183	1969692:1969707
WP_002295399.1|1869702_1871085_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	37.4	3.5e-86
WP_002292856.1|1871258_1871837_-	lytic polysaccharide monooxygenase	NA	A0A0K1Y848	Apis_mellifera_filamentous_virus	34.4	9.7e-14
WP_061573520.1|1872829_1874125_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	20.9	9.4e-09
WP_002295400.1|1874258_1875485_-	LCP family protein	NA	NA	NA	NA	NA
WP_002292860.1|1876238_1876439_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	67.7	7.6e-19
WP_002295401.1|1876572_1877181_-	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	60.1	7.7e-70
WP_002292862.1|1877265_1877736_-	GtrA family protein	NA	NA	NA	NA	NA
WP_002317368.1|1877783_1878698_-	cation transporter	NA	A0A1V0SED0	Indivirus	31.5	2.1e-10
WP_002289147.1|1878843_1879647_+	DUF1189 domain-containing protein	NA	NA	NA	NA	NA
WP_002289148.1|1879824_1880772_+	phosphoglycerate dehydrogenase	NA	NA	NA	NA	NA
WP_002296127.1|1880880_1882428_-|transposase	IS66 family transposase	transposase	NA	NA	NA	NA
WP_002287659.1|1882529_1882883_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_002285758.1|1882872_1883067_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002289149.1|1883322_1883616_-	iron-sulfur cluster biosynthesis protein	NA	NA	NA	NA	NA
WP_002289151.1|1883643_1884309_-	TrkA family potassium uptake protein	NA	NA	NA	NA	NA
WP_002295404.1|1884448_1885081_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_002312578.1|1885087_1886155_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_002295408.1|1886151_1886883_-	cell wall-active antibiotics response protein	NA	NA	NA	NA	NA
WP_002295409.1|1887050_1887530_-	transcription elongation factor GreA	NA	NA	NA	NA	NA
WP_002295410.1|1887665_1888841_-	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
WP_002297066.1|1889005_1890166_+	serine hydrolase	NA	A0A2R4AS58	Mycobacterium_phage	25.2	3.2e-08
WP_002297065.1|1890205_1891153_-	NAD-dependent epimerase/dehydratase family protein	NA	A0A1V0SKV4	Klosneuvirus	38.2	2.3e-52
WP_002297064.1|1891185_1892601_-	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_002321507.1|1892597_1893713_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_002297062.1|1893769_1895305_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002297061.1|1895327_1896302_-	glycosyltransferase family 2 protein	NA	A0A0F7L2F7	uncultured_marine_virus	35.2	2.5e-06
WP_002297060.1|1896346_1897312_-	glycosyltransferase	NA	A0A0F7L2F7	uncultured_marine_virus	34.6	2.5e-06
WP_002321509.1|1897304_1898372_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA	NA
WP_002297058.1|1898379_1899081_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_002312566.1|1899077_1899932_-	LicD family protein	NA	NA	NA	NA	NA
WP_002321510.1|1899964_1900768_-	glycosyltransferase	NA	F2Y1U7	Organic_Lake_phycodnavirus	31.5	5.1e-13
WP_002295430.1|1900826_1902218_-	sugar transferase	NA	NA	NA	NA	NA
WP_002297271.1|1902552_1903512_+|transposase	IS30-like element IS6770 family transposase	transposase	NA	NA	NA	NA
WP_002296538.1|1903579_1905718_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_002296539.1|1905756_1907343_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_002296541.1|1907332_1908553_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	3.3e-11
WP_002289081.1|1908564_1909371_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002296542.1|1909580_1910861_-	EpaQ family protein	NA	NA	NA	NA	NA
WP_002296543.1|1910904_1912938_-	hypothetical protein	NA	NA	NA	NA	NA
1912168:1912183	attL	AACAAAATAAAAAATC	NA	NA	NA	NA
WP_002294531.1|1912972_1913824_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	39.0	1.3e-38
WP_002296544.1|1913921_1914950_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	43.2	2.2e-69
WP_002286442.1|1914971_1915544_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	49.2	8.3e-42
WP_002286449.1|1915557_1916424_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	62.5	3.7e-102
WP_002321540.1|1916523_1917258_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_002286453.1|1917235_1918063_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_002286455.1|1918062_1918863_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_002286457.1|1918855_1919995_-	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA	NA
WP_002286461.1|1920070_1920994_-	YihY/virulence factor BrkB family protein	NA	NA	NA	NA	NA
WP_002294533.1|1921025_1921790_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_002286465.1|1921947_1922388_+	flavodoxin	NA	NA	NA	NA	NA
WP_002286467.1|1922565_1923135_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002286469.1|1923388_1924621_+	aminopeptidase	NA	NA	NA	NA	NA
WP_002286470.1|1924925_1925126_+|integrase	tyrosine-type recombinase/integrase	integrase	Q9AZR0	Lactococcus_phage	75.7	4.6e-08
WP_002286680.1|1925374_1925677_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286473.1|1925712_1926084_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296902.1|1926085_1926487_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286474.1|1926500_1926908_-	hypothetical protein	NA	NA	NA	NA	NA
WP_087046766.1|1927830_1928993_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.2	4.1e-80
WP_002286484.1|1929932_1930958_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A139ZVY1	Enterococcus_phage	61.3	2.1e-64
WP_002286683.1|1930954_1931179_-|holin	phage holin	holin	NA	NA	NA	NA
WP_002286686.1|1931175_1931469_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296594.1|1931506_1931644_-	XkdX family protein	NA	NA	NA	NA	NA
WP_002286491.1|1931645_1932092_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002290627.1|1932088_1932238_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286495.1|1932254_1934381_-	hypothetical protein	NA	A0A060AI60	Enterococcus_phage	40.1	1.4e-62
WP_002296595.1|1934404_1936696_-|tail	phage tail protein	tail	A0A1D3SNL1	Enterococcus_phage	30.0	1.6e-88
WP_002286500.1|1936705_1937443_-|tail	phage tail protein	tail	NA	NA	NA	NA
WP_002286502.1|1937493_1940925_-|tail	phage tail tape measure protein	tail	A0A1D3SNL5	Enterococcus_phage	44.4	3.1e-67
WP_002286510.1|1941126_1941489_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286512.1|1941508_1942117_-	hypothetical protein	NA	Q8W5Z9	Listeria_phage	41.1	3.0e-34
WP_002286516.1|1942128_1942533_-	hypothetical protein	NA	R4IBU7	Listeria_phage	29.5	6.1e-07
WP_002296598.1|1942525_1942927_-	hypothetical protein	NA	A0A1B1P759	Bacillus_phage	33.3	1.1e-13
WP_002286522.1|1942916_1943270_-|head	phage head closure protein	head	NA	NA	NA	NA
WP_002286523.1|1943259_1943571_-	hypothetical protein	NA	A0A1B1P751	Bacillus_phage	42.1	6.3e-12
WP_002286524.1|1943567_1944443_-	hypothetical protein	NA	D2IYX3	Enterococcus_phage	74.2	5.6e-130
WP_002286525.1|1944452_1945613_-|capsid	phage major capsid protein	capsid	A0A1B1P752	Bacillus_phage	50.1	1.8e-99
WP_002286527.1|1945612_1946299_-|protease	Clp protease ClpP	protease	A0A2I6PDD0	Staphylococcus_phage	39.7	1.0e-30
WP_002286530.1|1946261_1947440_-|portal	phage portal protein	portal	A0A1B1P754	Bacillus_phage	40.4	5.4e-80
WP_002286533.1|1947459_1949154_-|terminase	terminase large subunit	terminase	A0A1B1P766	Bacillus_phage	49.6	3.0e-148
WP_002286538.1|1949131_1949446_-|terminase	terminase	terminase	A0A1S7FYW6	Listeria_phage	37.9	3.3e-08
WP_002296599.1|1949548_1949830_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286540.1|1949834_1950179_-	HNH endonuclease	NA	A0A1B1P757	Bacillus_phage	57.1	3.8e-26
WP_002296600.1|1950204_1950372_-	thymidylate synthase	NA	NA	NA	NA	NA
WP_002311723.1|1950567_1950774_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002300143.1|1951227_1951503_+	hypothetical protein	NA	A0A2H4JEH2	uncultured_Caudovirales_phage	45.7	9.9e-17
WP_002296602.1|1951499_1951652_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286542.1|1951960_1952374_-	autolysin	NA	C9E2P5	Enterococcus_phage	81.0	1.5e-56
WP_002286693.1|1952450_1952747_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286545.1|1952743_1953301_-	DUF1642 domain-containing protein	NA	A0A0C5KKV2	Enterococcus_phage	36.2	2.8e-10
WP_061573521.1|1953297_1953717_-	YopX family protein	NA	D2IZL0	Enterococcus_phage	53.6	4.5e-29
WP_002322165.1|1953713_1953932_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286550.1|1953918_1954275_-	DUF1140 family protein	NA	A0A2H4JAZ4	uncultured_Caudovirales_phage	37.4	3.1e-10
WP_002286694.1|1954274_1954580_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296606.1|1954576_1954738_-	antitoxin	NA	NA	NA	NA	NA
WP_002286695.1|1954734_1955037_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296607.1|1955029_1955194_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286696.1|1955198_1955468_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286552.1|1955479_1956229_-	helix-turn-helix domain-containing protein	NA	A0A1L2BY83	Clostridium_phage	54.0	1.7e-31
WP_002286553.1|1956231_1956918_-	hypothetical protein	NA	C9E2N1	Enterococcus_phage	69.1	3.2e-88
WP_002286557.1|1956923_1957595_-	DUF1071 domain-containing protein	NA	A0A1B1P7F0	Bacillus_phage	47.4	4.2e-29
WP_002286559.1|1957587_1957929_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286562.1|1958106_1958805_-	phage regulatory protein	NA	D2IYT0	Enterococcus_phage	34.6	1.7e-25
WP_002286568.1|1958891_1959362_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296610.1|1959404_1959584_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286573.1|1959570_1959909_-	DUF771 domain-containing protein	NA	NA	NA	NA	NA
WP_002296611.1|1959924_1960128_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002296612.1|1961217_1961538_+	helix-turn-helix transcriptional regulator	NA	A0A1S5SDR1	Streptococcus_phage	40.2	2.0e-13
WP_002296613.1|1961555_1961987_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_002303013.1|1962116_1962578_+	SHOCT domain-containing protein	NA	A0A0F6N4L7	Staphylococcus_phage	34.8	4.5e-06
WP_002296616.1|1962611_1963247_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296617.1|1963359_1963995_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286587.1|1964293_1965433_+|integrase	site-specific integrase	integrase	Q9AZR0	Lactococcus_phage	47.1	2.6e-95
1969692:1969707	attR	AACAAAATAAAAAATC	NA	NA	NA	NA
>prophage 150
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1973334	1974612	2598959		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
WP_002286608.1|1973334_1974612_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	28.8	5.8e-35
>prophage 151
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	1977720	1982094	2598959	tRNA	Cyanophage(50.0%)	2	NA	NA
WP_002286618.1|1977720_1979247_+	glucose-6-phosphate dehydrogenase	NA	H6WFS4	Cyanophage	35.3	8.9e-75
WP_002286621.1|1979295_1982094_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A2H4UVG0	Bodo_saltans_virus	26.4	1.6e-74
>prophage 152
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2003103	2005296	2598959		Acanthamoeba_polyphaga_moumouvirus(50.0%)	2	NA	NA
WP_002286658.1|2003103_2004441_-	exodeoxyribonuclease VII large subunit	NA	L7RDW5	Acanthamoeba_polyphaga_moumouvirus	29.5	6.7e-26
WP_002286660.1|2004441_2005296_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	38.7	6.8e-40
>prophage 153
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2024437	2025178	2598959		Pandoravirus(100.0%)	1	NA	NA
WP_002288100.1|2024437_2025178_-	MBL fold metallo-hydrolase	NA	S4VYV9	Pandoravirus	26.3	3.9e-07
>prophage 154
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2028822	2046340	2598959		Streptococcus_phage(40.0%)	17	NA	NA
WP_002288090.1|2028822_2030028_-	D-alanyl-lipoteichoic acid biosynthesis protein DltB	NA	A0A125RNP0	Pseudomonas_phage	30.7	1.4e-19
WP_002288089.1|2030024_2031539_-	D-alanine--poly(phosphoribitol) ligase subunit DltA	NA	A0A2K9KZV5	Tupanvirus	28.5	3.4e-42
WP_002288113.1|2031549_2031699_-	teichoic acid D-Ala incorporation-associated protein DltX	NA	NA	NA	NA	NA
WP_002288087.1|2031979_2034022_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002304285.1|2034011_2034779_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.2	8.0e-32
WP_002288083.1|2035104_2037294_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	66.6	1.8e-286
WP_002288081.1|2037608_2038211_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A288TZV3	Enterococcus_phage	58.6	1.7e-53
WP_002294035.1|2038264_2039386_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_002288078.1|2039494_2040367_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	60.4	3.1e-88
WP_002288076.1|2040435_2040783_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	41.1	5.1e-18
WP_002288073.1|2040775_2041600_-	stage 0 sporulation family protein	NA	NA	NA	NA	NA
WP_002288071.1|2041635_2042574_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	34.4	3.3e-35
WP_002292340.1|2042587_2042917_-	cyclic-di-AMP receptor	NA	NA	NA	NA	NA
WP_002294039.1|2042931_2043576_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	52.6	4.2e-58
WP_002296223.1|2043639_2044236_-	recombination protein RecR	NA	NA	NA	NA	NA
WP_002292337.1|2044260_2044575_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_002294042.1|2044594_2046340_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	36.3	1.9e-49
>prophage 155
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2061687	2070608	2598959	integrase,transposase	Only_Syngen_Nebraska_virus(25.0%)	6	2057019:2057035	2076779:2076795
2057019:2057035	attL	TTAACGTTTTCTTGGAA	NA	NA	NA	NA
WP_002286999.1|2061687_2063298_-	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	48.4	2.3e-145
WP_002287001.1|2064490_2065831_-	type I glutamate--ammonia ligase	NA	A0A1V0SJ53	Klosneuvirus	25.6	9.1e-07
WP_002287002.1|2065858_2066251_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000222572.1|2066559_2067513_+|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_002287014.1|2067626_2068757_-	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	A0A218MNE0	uncultured_virus	45.3	6.0e-84
WP_002287015.1|2069405_2070608_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A0S2MV79	Bacillus_phage	28.5	1.1e-32
2076779:2076795	attR	TTCCAAGAAAACGTTAA	NA	NA	NA	NA
>prophage 156
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2086509	2095786	2598959		Mycoplasma_phage(50.0%)	10	NA	NA
WP_002287038.1|2086509_2087316_-	ABC transporter permease	NA	Q6GZ02	Mycoplasma_phage	27.6	7.9e-14
WP_002287039.1|2087327_2088413_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	45.0	4.0e-37
WP_002287040.1|2088429_2088972_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002287041.1|2089229_2090219_+	oxidoreductase	NA	NA	NA	NA	NA
WP_002287044.1|2090215_2090953_+	phosphopantothenate--cysteine ligase	NA	NA	NA	NA	NA
WP_002287045.1|2090949_2091501_+	phosphopantothenoylcysteine decarboxylase	NA	A0A1V0S7W6	Shearwaterpox_virus	41.2	3.2e-30
WP_002287046.1|2091516_2092149_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_002296930.1|2092233_2092881_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_002287048.1|2092885_2093869_+	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_002287050.1|2094271_2095786_-	flavocytochrome c	NA	A0A2P0ZL82	Lactobacillus_phage	30.3	8.3e-49
>prophage 157
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2103710	2109276	2598959	tRNA	Cafeteria_roenbergensis_virus(33.33%)	6	NA	NA
WP_002297274.1|2103710_2104463_+	exodeoxyribonuclease III	NA	E3T4M6	Cafeteria_roenbergensis_virus	47.1	2.9e-58
WP_002291442.1|2105326_2105860_+	exonuclease	NA	A0A1S5SFA9	Streptococcus_phage	43.4	5.9e-26
WP_002287063.1|2106349_2106874_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002287066.1|2106866_2107340_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_002287068.1|2107462_2108443_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_002287070.1|2108595_2109276_-	uracil-DNA glycosylase	NA	A0A0B5IW78	Pandoravirus	43.3	7.3e-45
>prophage 158
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2113047	2113797	2598959		Lactobacillus_phage(100.0%)	1	NA	NA
WP_002287078.1|2113047_2113797_+	nicotinamide mononucleotide transporter	NA	A0A2H4PB74	Lactobacillus_phage	70.7	5.1e-92
>prophage 159
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2118759	2119665	2598959		Staphylococcus_phage(100.0%)	1	NA	NA
WP_002287087.1|2118759_2119665_+	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	39.4	6.8e-38
>prophage 160
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2127522	2130404	2598959		Streptococcus_phage(100.0%)	2	NA	NA
WP_002296175.1|2127522_2129025_-	ABC-F type ribosomal protection protein Eat(A)	NA	A0A1B0RXA0	Streptococcus_phage	26.1	1.4e-27
WP_002289891.1|2129282_2130404_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	31.3	5.8e-23
>prophage 161
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2139903	2149297	2598959		Planktothrix_phage(25.0%)	6	NA	NA
WP_002296186.1|2139903_2140977_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	35.5	5.8e-28
WP_002296187.1|2141623_2142295_-	HAD family phosphatase	NA	NA	NA	NA	NA
WP_002304253.1|2142381_2145060_-	magnesium-translocating P-type ATPase	NA	M1HXH2	Paramecium_bursaria_Chlorella_virus	25.6	1.1e-48
WP_002293327.1|2145718_2146156_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	46.2	4.1e-25
WP_002296189.1|2146177_2147044_-	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002293776.1|2147203_2149297_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	47.1	4.5e-162
>prophage 162
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2154514	2159951	2598959		Lactobacillus_virus(25.0%)	5	NA	NA
WP_002293834.1|2154514_2155216_-	deoxynucleoside kinase	NA	C1KFI3	Lactobacillus_virus	48.6	7.8e-50
WP_002293607.1|2155231_2155672_-	nucleoside deoxyribosyltransferase	NA	A0A2P0ZL88	Lactobacillus_phage	50.7	8.9e-36
WP_002293608.1|2155671_2156247_-	TIGR00730 family Rossman fold protein	NA	A0A1D3SNB7	Enterococcus_phage	44.9	1.5e-35
WP_002293839.1|2157732_2158434_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002293840.1|2158541_2159951_-	family 1 glycosylhydrolase	NA	A0A0B5JD41	Pandoravirus	28.0	6.6e-32
>prophage 163
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2175715	2183472	2598959	transposase	Streptococcus_phage(50.0%)	5	NA	NA
WP_002291166.1|2175715_2176354_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	28.8	5.9e-12
WP_002296200.1|2176357_2178340_-	DUF1430 domain-containing protein	NA	NA	NA	NA	NA
WP_002288539.1|2178519_2179185_+	helix-turn-helix domain-containing protein	NA	A0A2I7SCV6	Paenibacillus_phage	47.8	1.1e-05
WP_002296623.1|2180332_2181628_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	37.5	3.9e-55
WP_002296918.1|2182026_2183472_+|transposase	IS1182-like element ISEfa7 family transposase	transposase	A0A1X9I5T2	Streptococcus_phage	48.0	1.5e-124
>prophage 164
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2187352	2206733	2598959	integrase	Staphylococcus_phage(22.22%)	21	2181891:2181908	2197614:2197631
2181891:2181908	attL	CTGGTCAAAATCTGGTCA	NA	NA	NA	NA
WP_002287733.1|2187352_2188597_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	26.9	3.3e-19
WP_002287732.1|2188589_2190182_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	50.9	6.8e-126
WP_002287731.1|2190690_2191416_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002287730.1|2191569_2191896_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002287729.1|2191932_2192298_-	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_002296546.1|2192334_2192550_-	helix-turn-helix transcriptional regulator	NA	A0A139ZPI6	Marinitoga_camini_virus	41.8	4.7e-06
WP_002287726.1|2192678_2193014_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002287725.1|2193089_2195087_-	hypothetical protein	NA	A0A1Z1LZK7	Bacillus_phage	23.8	5.2e-22
WP_002287723.1|2195184_2195460_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002332746.1|2195692_2196427_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002287705.1|2196465_2197608_+|integrase	site-specific integrase	integrase	A0A1S5S7K9	Streptococcus_phage	34.8	3.3e-58
WP_002287686.1|2197702_2199094_-	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
2197614:2197631	attR	CTGGTCAAAATCTGGTCA	NA	NA	NA	NA
WP_002287684.1|2199098_2199569_-	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA	NA
WP_002287683.1|2199555_2200791_-	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	47.7	3.9e-113
WP_002287681.1|2200787_2202074_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
WP_002287679.1|2202086_2202860_-	Fe-S cluster assembly ATPase SufC	NA	A0A2R8FG22	Brazilian_cedratvirus	28.8	2.1e-08
WP_002287678.1|2203056_2203905_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002287674.1|2203928_2204615_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002304234.1|2204607_2205642_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	35.1	4.2e-28
WP_002291179.1|2206036_2206375_-	glycine cleavage system protein H	NA	NA	NA	NA	NA
WP_002295166.1|2206376_2206733_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	42.3	2.7e-22
>prophage 165
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2211642	2213300	2598959		Acanthamoeba_polyphaga_mimivirus(50.0%)	2	NA	NA
WP_002289775.1|2211642_2212107_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	38.7	8.8e-18
WP_002289773.1|2212352_2213300_+	glycosyltransferase family 2 protein	NA	V5USA4	Oenococcus_phage	51.0	5.0e-84
>prophage 166
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2222407	2230474	2598959		Enterococcus_phage(25.0%)	7	NA	NA
WP_002286728.1|2222407_2223007_+	metallophosphoesterase family protein	NA	A0A288TXW7	Enterococcus_phage	40.5	1.5e-33
WP_002291207.1|2223144_2224431_-	multidrug efflux MFS transporter EfmA	NA	A0A1B0RXG2	Streptococcus_phage	36.7	4.0e-68
WP_002286736.1|2224701_2225046_-	DUF1831 domain-containing protein	NA	NA	NA	NA	NA
WP_002295158.1|2225182_2226328_-	cysteine desulfurase	NA	NA	NA	NA	NA
WP_002286741.1|2226507_2227482_-	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	32.2	2.0e-40
WP_002286745.1|2227561_2228437_-	dihydrolipoamide dehydrogenase	NA	NA	NA	NA	NA
WP_002286747.1|2228566_2230474_+	peptidase M13	NA	E3T4I7	Cafeteria_roenbergensis_virus	31.2	2.7e-81
>prophage 167
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2234563	2238902	2598959	lysis	Bacillus_virus(50.0%)	6	NA	NA
WP_002286753.1|2234563_2235109_-	cysteine hydrolase	NA	G3MA16	Bacillus_virus	37.4	2.6e-24
WP_002286756.1|2235120_2235813_-	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA	NA
WP_002286760.1|2235831_2236116_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002325125.1|2236128_2236692_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_002286764.1|2236919_2237582_+|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis family protein	lysis	NA	NA	NA	NA
WP_002286766.1|2237705_2238902_+	toxic anion resistance protein	NA	A0A2K9VCT6	Lactobacillus_phage	29.1	3.9e-33
>prophage 168
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2259774	2260116	2598959		Streptococcus_phage(100.0%)	1	NA	NA
WP_002286801.1|2259774_2260116_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A1S5SEX8	Streptococcus_phage	43.5	2.2e-18
>prophage 169
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2263881	2265213	2598959		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_002286818.1|2263881_2265213_-	FAD-containing oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	57.6	8.2e-141
>prophage 170
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2273503	2274112	2598959		Enterococcus_phage(100.0%)	1	NA	NA
WP_002286836.1|2273503_2274112_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A249XZV3	Enterococcus_phage	53.2	2.3e-34
>prophage 171
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2278344	2279091	2598959		Staphylococcus_phage(100.0%)	1	NA	NA
WP_002286846.1|2278344_2279091_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	24.8	1.1e-12
>prophage 172
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2287629	2289012	2598959		Streptococcus_phage(100.0%)	1	NA	NA
WP_002286860.1|2287629_2289012_+	Y-family DNA polymerase	NA	M1Q231	Streptococcus_phage	40.2	3.1e-90
>prophage 173
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2303508	2306842	2598959		Lactococcus_phage(50.0%)	4	NA	NA
WP_002289436.1|2303508_2304426_+	cysteine synthase family protein	NA	A0A1W6JHY1	Lactococcus_phage	40.9	8.0e-63
WP_002289438.1|2304438_2305584_+	cystathionine gamma-synthase	NA	NA	NA	NA	NA
WP_002289439.1|2305754_2306213_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_002289440.1|2306371_2306842_+	glutathione peroxidase	NA	A0A1S7DM81	Molluscum_contagiosum_virus	26.8	2.7e-06
>prophage 174
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2313721	2317609	2598959		Bacillus_virus(50.0%)	3	NA	NA
WP_002286261.1|2313721_2315908_-	ATP-dependent helicase	NA	G3MA40	Bacillus_virus	26.4	2.3e-39
WP_002286265.1|2316125_2316809_+	DUF1275 domain-containing protein	NA	NA	NA	NA	NA
WP_002321450.1|2316889_2317609_-	deoxynucleoside kinase	NA	C1KFI3	Lactobacillus_virus	47.7	1.8e-49
>prophage 175
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2329020	2329722	2598959		Planktothrix_phage(100.0%)	1	NA	NA
WP_002296067.1|2329020_2329722_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	1.6e-34
>prophage 176
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2334778	2336923	2598959		Clostridium_phage(100.0%)	1	NA	NA
WP_002286297.1|2334778_2336923_+	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	44.7	7.5e-19
>prophage 177
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2340107	2340860	2598959		Planktothrix_phage(100.0%)	1	NA	NA
WP_002286304.1|2340107_2340860_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.6	4.9e-34
>prophage 178
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2346880	2351073	2598959		Bacillus_phage(66.67%)	3	NA	NA
WP_002296820.1|2346880_2347924_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	41.1	1.0e-53
WP_002286323.1|2347926_2348595_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	45.0	6.9e-48
WP_002286325.1|2348736_2351073_+	ABC transporter ATP-binding protein/permease	NA	G9BWD6	Planktothrix_phage	38.8	1.1e-34
>prophage 179
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2364800	2370178	2598959		Vibrio_phage(50.0%)	3	NA	NA
WP_002286368.1|2364800_2366966_-	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	32.7	1.9e-06
WP_002286373.1|2367225_2369520_+	glycoside hydrolase family 65 protein	NA	NA	NA	NA	NA
WP_002286375.1|2369512_2370178_+	beta-phosphoglucomutase	NA	M1H9H9	Acanthocystis_turfacea_Chlorella_virus	27.9	2.7e-12
>prophage 180
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2377807	2382748	2598959	tRNA	Pectobacterium_phage(50.0%)	4	NA	NA
WP_002286405.1|2377807_2379064_-|tRNA	tyrosine--tRNA ligase	tRNA	A0A1L2CUL7	Pectobacterium_phage	42.5	9.0e-81
WP_002296829.1|2379643_2380945_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_002294634.1|2381013_2381613_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002289288.1|2381866_2382748_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	31.6	1.5e-21
>prophage 181
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2395625	2395940	2598959		Ostreococcus_tauri_virus(100.0%)	1	NA	NA
WP_002294651.1|2395625_2395940_-	rhodanese-like domain-containing protein	NA	E4WM79	Ostreococcus_tauri_virus	39.1	3.4e-05
>prophage 182
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2400342	2401059	2598959		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_002292560.1|2400342_2401059_-	aquaporin family protein	NA	M1HVL5	Acanthocystis_turfacea_Chlorella_virus	36.9	1.6e-29
>prophage 183
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2415756	2420711	2598959		Pandoravirus(50.0%)	3	NA	NA
WP_002298167.1|2415756_2417253_-	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	22.4	3.4e-26
WP_002294685.1|2417446_2419069_-	alpha-glucosidase	NA	NA	NA	NA	NA
WP_002301172.1|2419397_2420711_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	32.1	2.6e-46
>prophage 184
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2442255	2444808	2598959		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_061573530.1|2442255_2444808_-	HAD-IC family P-type ATPase	NA	M1I547	Acanthocystis_turfacea_Chlorella_virus	29.8	2.5e-69
>prophage 185
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2455305	2499233	2598959	transposase,tRNA	Synechococcus_phage(33.33%)	32	NA	NA
WP_000997695.1|2455305_2456484_-|transposase	IS256-like element ISEf1 family transposase	transposase	NA	NA	NA	NA
WP_002299903.1|2456816_2457950_+	alcohol dehydrogenase catalytic domain-containing protein	NA	E3SJ82	Synechococcus_phage	24.8	1.5e-13
WP_002287574.1|2457980_2458301_+	YrhK family protein	NA	NA	NA	NA	NA
WP_002299899.1|2458329_2458794_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002287577.1|2458922_2460176_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002299897.1|2460204_2460522_-	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002287582.1|2460547_2460868_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002324343.1|2461331_2462747_-	glycoside hydrolase family 1 protein	NA	NA	NA	NA	NA
WP_002326704.1|2463681_2464590_-|transposase	IS982-like element ISEfm1 family transposase	transposase	NA	NA	NA	NA
WP_002287585.1|2465276_2465975_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002321245.1|2466263_2467220_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_002298838.1|2467333_2468167_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_002319875.1|2468341_2469976_-	membrane protein	NA	NA	NA	NA	NA
WP_079995562.1|2470018_2470963_-	cell surface protein	NA	NA	NA	NA	NA
WP_000222577.1|2471830_2472790_-|transposase	IS30-like element IS1252 family transposase	transposase	NA	NA	NA	NA
WP_002294728.1|2473798_2474539_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_002294730.1|2474730_2475366_-	DUF998 domain-containing protein	NA	NA	NA	NA	NA
WP_080447705.1|2475512_2476754_-	serine/threonine transporter SstT	NA	NA	NA	NA	NA
WP_193394790.1|2476951_2479981_+	sulfatase-like hydrolase/transferase	NA	NA	NA	NA	NA
WP_002324336.1|2480040_2480757_-	DUF4767 domain-containing protein	NA	NA	NA	NA	NA
WP_002298699.1|2480998_2481541_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_002294740.1|2481545_2481773_-	cation transporter	NA	NA	NA	NA	NA
WP_002298700.1|2481851_2483732_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	34.2	9.9e-100
WP_061573534.1|2483921_2484536_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002349755.1|2484677_2485238_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002351320.1|2487879_2489520_-	membrane protein	NA	NA	NA	NA	NA
WP_086953888.1|2489879_2491042_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	51.3	1.6e-79
WP_002328694.1|2491882_2492842_-|transposase	IS30-like element IS6770 family transposase	transposase	NA	NA	NA	NA
WP_002323136.1|2493072_2494509_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002287852.1|2494673_2496074_-	glutamate decarboxylase	NA	NA	NA	NA	NA
WP_002323137.1|2496086_2497598_-	glutamate:gamma-aminobutyrate antiporter	NA	NA	NA	NA	NA
WP_061573536.1|2498054_2499233_+|transposase	IS256-like element ISEfm2 family transposase	transposase	NA	NA	NA	NA
>prophage 186
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2505172	2506459	2598959		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_061573537.1|2505172_2506459_+	trypsin-like peptidase domain-containing protein	NA	A0A1B1IT49	uncultured_Mediterranean_phage	30.2	4.3e-22
>prophage 187
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2520682	2523810	2598959		Agrobacterium_phage(50.0%)	4	NA	NA
WP_002293357.1|2520682_2521207_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.3	1.4e-14
WP_002294161.1|2521526_2522159_+	pentapeptide repeat-containing protein	NA	NA	NA	NA	NA
WP_002294163.1|2522160_2523066_-	magnesium transporter CorA family protein	NA	NA	NA	NA	NA
WP_002307422.1|2523150_2523810_-	deoxynucleoside kinase	NA	C1KFI3	Lactobacillus_virus	51.8	1.9e-58
>prophage 188
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2548491	2556378	2598959	tRNA,holin	uncultured_Mediterranean_phage(33.33%)	5	NA	NA
WP_002294183.1|2548491_2549637_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	40.9	2.5e-82
WP_010777016.1|2549854_2550553_+	DUF975 family protein	NA	NA	NA	NA	NA
WP_061573540.1|2550720_2553360_-	cation-translocating P-type ATPase	NA	A0A1J0FA34	Only_Syngen_Nebraska_virus	31.2	1.6e-84
WP_002296565.1|2553978_2555010_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_002294192.1|2555202_2556378_+|holin	betaine/proline/choline family ABC transporter ATP-binding protein	holin	Q6GZ03	Mycoplasma_phage	32.9	1.0e-17
>prophage 189
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2578410	2581912	2598959		Lactobacillus_phage(50.0%)	4	NA	NA
WP_002289874.1|2578410_2578773_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A291I9M9	Lactobacillus_phage	37.8	7.6e-09
WP_002294207.1|2578783_2579905_-	alanine racemase	NA	NA	NA	NA	NA
WP_002296554.1|2579920_2580271_-	holo-ACP synthase	NA	NA	NA	NA	NA
WP_002294211.1|2580400_2581912_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	36.2	6.6e-62
>prophage 190
NZ_CP011828	Enterococcus faecium strain UW8175 chromosome, complete genome	2598959	2585010	2591396	2598959		Ostreococcus_lucimarinus_virus(33.33%)	6	NA	NA
WP_002317554.1|2585010_2586756_+	AarF/ABC1/UbiB kinase family protein	NA	M4R0M8	Ostreococcus_lucimarinus_virus	28.1	1.3e-40
WP_002294214.1|2587004_2587472_-	YaiI/YqxD family protein	NA	NA	NA	NA	NA
WP_002294217.1|2587455_2588829_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296548.1|2589150_2589639_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002294220.1|2589660_2590263_-	TVP38/TMEM64 family protein	NA	M1Q152	Streptococcus_phage	30.6	3.6e-19
WP_002289751.1|2590766_2591396_-	uridine kinase	NA	A0A1V0SAA3	Catovirus	40.2	3.1e-34
>prophage 1
NZ_CP011829	Enterococcus faecium strain UW8175 plasmid unnamed1, complete sequence	229882	987	53667	229882	holin,transposase,bacteriocin	Streptococcus_phage(33.33%)	54	NA	NA
WP_002300843.1|987_2508_+|transposase	IS66 family transposase	transposase	S5VTD3	Leptospira_phage	31.6	1.1e-48
WP_002300842.1|2694_3267_-	SIS domain-containing protein	NA	NA	NA	NA	NA
WP_002300841.1|3273_3936_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_002300840.1|3951_4467_-	YjbQ family protein	NA	NA	NA	NA	NA
WP_002300838.1|4468_4753_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002300836.1|4786_6115_-	PTS galactitol transporter subunit IIC	NA	NA	NA	NA	NA
WP_002300835.1|6128_6584_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_002300833.1|6586_8533_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_000997695.1|8921_10100_-|transposase	IS256-like element ISEf1 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	25.6	3.0e-30
WP_002300807.1|10471_10735_-|bacteriocin	uberolysin/carnocyclin family circular bacteriocin	bacteriocin	NA	NA	NA	NA
WP_000222572.1|10855_11809_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.8	3.7e-34
WP_002311569.1|12777_13134_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002300804.1|13192_13372_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002300801.1|13816_14089_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002300799.1|14098_14254_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002300797.1|14269_14521_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002305810.1|14520_14727_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002305809.1|15169_15394_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002295624.1|15583_15706_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_002295625.1|15864_16122_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002301800.1|16631_17531_-	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA	NA
WP_002299811.1|17543_18140_-	type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein	NA	NA	NA	NA	NA
WP_002295632.1|18220_18370_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002303486.1|18485_20495_-	DNA topoisomerase III	NA	A0A1X9I6W8	Streptococcus_phage	52.6	1.6e-111
WP_002313123.1|20505_21975_-	toprim domain-containing protein	NA	NA	NA	NA	NA
WP_002317424.1|22035_24408_-	hypothetical protein	NA	B5SP25	Lactococcus_phage	32.5	1.8e-13
WP_002330536.1|24817_26068_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	63.3	3.0e-113
WP_002322479.1|26203_26398_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296380.1|26543_26879_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296379.1|26899_28492_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296378.1|28510_28933_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296377.1|28934_29231_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002305788.1|29462_29732_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296375.1|29775_30849_-	DUF4199 domain-containing protein	NA	NA	NA	NA	NA
WP_002317425.1|31121_31928_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002311547.1|31938_32583_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061573551.1|32598_33804_-	glucosaminidase domain-containing protein	NA	Q6SEC2	Lactobacillus_prophage	41.8	1.5e-32
WP_002317427.1|33803_35828_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002317428.1|35990_36584_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002295656.1|36584_36917_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002332868.1|36968_39341_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010725834.1|39337_41947_-	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA	NA
WP_002317430.1|41946_44010_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002295662.1|44079_44382_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002305229.1|44399_44642_-	DUF5415 family protein	NA	NA	NA	NA	NA
WP_002311541.1|44638_45097_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002311538.1|45284_45494_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002311537.1|45613_47665_+	FIVAR domain-containing protein	NA	NA	NA	NA	NA
WP_002311535.1|47700_49800_-	isopeptide-forming domain-containing fimbrial protein	NA	NA	NA	NA	NA
WP_002311534.1|49842_50091_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002311533.1|50100_50928_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002311532.1|50924_51680_-	class C sortase	NA	NA	NA	NA	NA
WP_002311530.1|52123_53242_-|transposase	transposase	transposase	A0A286QMQ9	Streptococcus_phage	50.8	1.1e-95
WP_002311528.1|53265_53667_-|transposase	IS200/IS605 family transposase	transposase	Q332K6	Clostridium_botulinum_C_phage	62.4	6.9e-43
>prophage 2
NZ_CP011829	Enterococcus faecium strain UW8175 plasmid unnamed1, complete sequence	229882	61719	109781	229882	transposase	Bacillus_phage(29.41%)	43	NA	NA
WP_061573552.1|61719_62679_+|transposase	IS30-like element IS6770 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.1	5.1e-36
WP_002348857.1|63270_63465_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002290397.1|64208_64463_+	AbrB family transcriptional regulator	NA	NA	NA	NA	NA
WP_002290394.1|64463_64781_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_002287525.1|65312_66461_-|transposase	transposase	transposase	A0A288TXV8	Enterococcus_phage	93.4	1.2e-204
WP_002287522.1|66477_66882_-|transposase	IS200/IS605-like element ISEfa4 family transposase	transposase	A0A286QN76	Streptococcus_phage	73.8	1.3e-52
WP_112009138.1|67216_68378_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	50.5	3.3e-77
WP_002307629.1|68572_68839_+	YfhO family protein	NA	NA	NA	NA	NA
WP_002307630.1|68920_69217_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002295288.1|69226_69433_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080447711.1|70445_72089_-	peptidoglycan DD-metalloendopeptidase family protein	NA	V5R8R0	Arthrobacter_phage	39.7	1.9e-14
WP_002307641.1|72347_72755_+	NusG domain II-containing protein	NA	NA	NA	NA	NA
WP_002328342.1|72933_74217_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002328849.1|74927_76478_+|transposase	IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	38.1	2.8e-92
WP_002325573.1|76591_76771_-	DUF2933 domain-containing protein	NA	NA	NA	NA	NA
WP_002307648.1|76773_76998_-	DUF2933 domain-containing protein	NA	NA	NA	NA	NA
WP_002294779.1|76981_77785_-	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
WP_002307650.1|77940_78555_+	TIGR01906 family membrane protein	NA	NA	NA	NA	NA
WP_002294786.1|80518_80743_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_002375819.1|80753_82337_+	multicopper oxidase domain-containing protein	NA	NA	NA	NA	NA
WP_002294790.1|82364_83045_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	37.4	2.8e-36
WP_002307657.1|83044_84439_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	32.8	7.2e-39
WP_002307659.1|84453_84660_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002316691.1|84680_85277_+	YdhK family protein	NA	NA	NA	NA	NA
WP_104681286.1|86324_87451_-|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	53.7	1.9e-74
WP_002294574.1|88061_88517_+	copper-responsive transcriptional repressor TcrY	NA	NA	NA	NA	NA
WP_002346959.1|88529_90995_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	35.4	9.6e-103
WP_002335389.1|91079_91286_+	copper chaperone TcrZ	NA	NA	NA	NA	NA
WP_002346660.1|91424_93557_+	copper-translocating P-type ATPase TcrB	NA	E4ZFI9	Streptococcus_phage	29.4	2.3e-60
WP_002287920.1|93781_94462_+|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.1	7.6e-127
WP_002292678.1|94705_95035_+	AbrB family transcriptional regulator	NA	NA	NA	NA	NA
WP_010722134.1|95024_95312_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_002292680.1|95597_96455_+	ParA family protein	NA	F0PIG8	Enterococcus_phage	30.7	8.1e-33
WP_002292681.1|96455_97004_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002295679.1|97263_97992_+	peptidase	NA	A0A1B0T6A2	Bacillus_phage	26.1	3.1e-09
WP_002326175.1|98021_99149_+	S8 family serine peptidase	NA	A0A217EQY2	Bacillus_phage	33.5	1.1e-13
WP_010780430.1|101675_102671_+	2-dehydro-3-deoxygalactonokinase	NA	NA	NA	NA	NA
WP_049142559.1|102675_103302_+	2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA	NA
WP_060810755.1|103695_104703_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_016922317.1|105169_106576_+	6-phospho-beta-galactosidase	NA	A0A0B5JD41	Pandoravirus	30.2	3.4e-44
WP_060810756.1|106598_106922_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA	NA
WP_010780435.1|106932_108615_+	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_002343723.1|108821_109781_+|transposase	IS30 family transposase	transposase	H7BUM7	unidentified_phage	27.2	9.7e-19
>prophage 3
NZ_CP011829	Enterococcus faecium strain UW8175 plasmid unnamed1, complete sequence	229882	127592	187152	229882	integrase,transposase	Staphylococcus_phage(21.43%)	47	146885:146902	192960:192977
WP_002324630.1|127592_128783_-|transposase	IS256-like element ISLgar5 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	28.4	4.3e-24
WP_002326561.1|128929_130018_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080447712.1|131073_131250_+	foldase PrsA domain protein	NA	NA	NA	NA	NA
WP_002326565.1|131373_132234_-	aldose 1-epimerase	NA	NA	NA	NA	NA
WP_002287525.1|132378_133527_-|transposase	transposase	transposase	A0A288TXV8	Enterococcus_phage	93.4	1.2e-204
WP_002287522.1|133543_133948_-|transposase	IS200/IS605-like element ISEfa4 family transposase	transposase	A0A286QN76	Streptococcus_phage	73.8	1.3e-52
WP_002328395.1|134290_134956_-	beta-phosphoglucomutase	NA	M1H9H9	Acanthocystis_turfacea_Chlorella_virus	27.8	1.8e-11
WP_002328394.1|134948_137243_-	glycoside hydrolase family 65 protein	NA	NA	NA	NA	NA
WP_002328393.1|137524_139687_+	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	41.1	4.3e-06
WP_002328392.1|139899_140724_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_002291320.1|141044_141206_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002325884.1|142530_143484_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.1	1.3e-34
WP_061573554.1|145766_146342_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061573555.1|146883_147294_+	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	51.1	4.3e-32
146885:146902	attL	TGAAAAAAATTTATTTTT	NA	NA	NA	NA
WP_137277835.1|147712_148807_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_061573578.1|149259_150099_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061573557.1|150114_150717_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061573558.1|150706_152983_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_061573559.1|153129_153819_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010719963.1|154607_155339_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_061573560.1|155351_156524_+	SIS domain-containing protein	NA	NA	NA	NA	NA
WP_061573561.1|156546_157554_+	tagatose-bisphosphate aldolase	NA	NA	NA	NA	NA
WP_061573562.1|157565_158504_+	hexose kinase	NA	NA	NA	NA	NA
WP_010738366.1|159337_161116_+	beta-galactosidase	NA	NA	NA	NA	NA
WP_010719958.1|161119_161599_+	PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB	NA	NA	NA	NA	NA
WP_061573563.1|161611_162508_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_010719956.1|162494_163304_+	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA	NA
WP_010719955.1|163341_163746_+	PTS fructose transporter subunit IIA	NA	NA	NA	NA	NA
WP_061573579.1|164218_165100_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_061573566.1|165425_166445_+	putrescine carbamoyltransferase	NA	M1HWF9	Paramecium_bursaria_Chlorella_virus	26.1	1.1e-15
WP_061573567.1|167948_168353_+	organic hydroperoxide resistance protein	NA	NA	NA	NA	NA
WP_002292292.1|168515_169559_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061573568.1|169573_170137_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_002327891.1|170332_171511_-|transposase	IS256-like element ISEfm2 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	25.2	4.4e-29
WP_010829815.1|171788_171980_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_061573569.1|171960_173457_+	N-6 DNA methylase	NA	A0A076FHE5	Aureococcus_anophage	26.3	2.8e-12
WP_010731541.1|173456_174542_+	DNA cytosine methyltransferase	NA	A0A1P8CX13	Bacillus_phage	46.0	8.9e-45
WP_061573570.1|174628_177166_+	BpuSI family type II restriction endonuclease	NA	NA	NA	NA	NA
WP_002296569.1|177490_178000_+	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	34.8	2.8e-17
WP_002326131.1|178190_178751_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002291914.1|179201_180140_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_002291912.1|180152_181205_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_148654935.1|182573_182918_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002311756.1|183519_184125_+	Fic family protein	NA	NA	NA	NA	NA
WP_061573572.1|184546_185455_-|transposase	IS982-like element ISEfm1 family transposase	transposase	NA	NA	NA	NA
WP_002290383.1|185951_186506_+|integrase	tyrosine-type recombinase/integrase	integrase	W8CYP1	Bacillus_phage	46.1	8.6e-36
WP_002290382.1|186678_187152_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A097PAS9	Streptococcus_pyogenes_phage	44.2	2.3e-13
192960:192977	attR	AAAAATAAATTTTTTTCA	NA	NA	NA	NA
>prophage 1
NZ_CP011830	Enterococcus faecium strain UW8175 plasmid unnamed2, complete sequence	38512	0	7930	38512		Streptococcus_phage(100.0%)	10	NA	NA
WP_193394793.1|0_261_-	hypothetical protein	NA	E4ZFP3	Streptococcus_phage	100.0	1.3e-34
WP_072387101.1|371_779_-	WYL domain-containing protein	NA	A0A1B0RXM3	Streptococcus_phage	98.3	1.1e-59
WP_001079938.1|751_1324_-	HTH domain-containing protein	NA	A0A1B0RXM1	Streptococcus_phage	99.5	5.5e-102
WP_061573581.1|1599_2394_-	aminoglycoside O-phosphotransferase APH(3')-IIIa	NA	E4ZFP6	Streptococcus_phage	99.6	8.6e-154
WP_000627290.1|2486_3029_-	streptothricin N-acetyltransferase Sat4	NA	A0A1B0RXL7	Streptococcus_phage	100.0	8.9e-94
WP_001255866.1|3025_3934_-	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NA	E4ZFP8	Streptococcus_phage	100.0	2.8e-177
WP_000662263.1|3966_4701_-	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	100.0	1.5e-141
WP_000228166.1|4681_5551_-	nucleotidyltransferase domain-containing protein	NA	A0A1X9I6C9	Streptococcus_phage	95.8	4.3e-159
WP_000567888.1|5653_5899_-	single-stranded DNA-binding protein	NA	NA	NA	NA	NA
WP_002292226.1|7192_7930_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NA	E4ZFQ0	Streptococcus_phage	99.6	1.4e-134
>prophage 2
NZ_CP011830	Enterococcus faecium strain UW8175 plasmid unnamed2, complete sequence	38512	23327	33260	38512	transposase	Bacillus_phage(37.5%)	12	NA	NA
WP_000222573.1|23327_24287_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.1	2.0e-32
WP_000053907.1|24310_24607_-	replication control protein PrgN	NA	NA	NA	NA	NA
WP_000947691.1|24741_26235_-	primase C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_000429439.1|26846_27800_+	ParA family protein	NA	F0PIG8	Enterococcus_phage	26.1	7.7e-16
WP_001196543.1|27771_28047_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000199136.1|28239_28494_+|transposase	transposase	transposase	A0A1P8CWP5	Bacillus_phage	47.6	2.1e-13
WP_002322130.1|28604_28859_+|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	50.0	4.1e-09
WP_086953888.1|28899_30061_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	51.3	1.6e-79
WP_073120187.1|30162_30735_+|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	57.1	5.0e-55
WP_000170424.1|31207_31780_-	recombinase family protein	NA	A0A1J1J8Z4	Escherichia_phage	46.0	6.8e-36
WP_000599739.1|31795_32401_-	cell filamentation protein	NA	NA	NA	NA	NA
WP_001015311.1|32579_33260_-|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.6	1.5e-127
