The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP007205	Pasteurella multocida subsp. multocida PMTB2.1, complete genome	2315138	532575	599404	2315138	plate,protease,head,tRNA,tail	Shigella_phage(27.5%)	73	NA	NA
WP_061405999.1|532575_533058_+|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	53.9	4.1e-26
WP_005726292.1|533120_533666_-	HAD family hydrolase	NA	A0A140XBD6	Dickeya_phage	41.2	3.1e-22
WP_005726295.1|533665_534601_-	KpsF/GutQ family sugar isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	33.1	1.3e-39
WP_005726298.1|535163_535898_-	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_005726300.1|535953_537321_-	TolC family protein	NA	NA	NA	NA	NA
WP_005726301.1|537798_539478_+|tRNA	glutamine--tRNA ligase	tRNA	A0A222YZ70	Escherichia_phage	77.1	2.4e-254
WP_005726317.1|539682_541128_+	alanine:cation symporter family protein	NA	NA	NA	NA	NA
WP_061406000.1|541227_541719_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_005726321.1|541703_542243_+	hypothetical protein	NA	A0A023NGN6	Nitrincola_phage	31.8	8.2e-07
WP_005756428.1|542349_544194_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_005726323.1|544260_545148_-	(2E,6E)-farnesyl diphosphate synthase	NA	NA	NA	NA	NA
WP_005721990.1|545166_545412_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_061406001.1|545589_548076_-	trimethylamine-N-oxide reductase TorA	NA	A0A077SK27	Escherichia_phage	28.9	1.7e-75
WP_014325971.1|548235_549351_-	cytochrome C nitrate reductase	NA	NA	NA	NA	NA
WP_005753929.1|549651_551094_+|tRNA	tRNA 4-thiouridine(8) synthase ThiI	tRNA	NA	NA	NA	NA
WP_005721994.1|551133_551454_-	YciU family protein	NA	NA	NA	NA	NA
WP_061406002.1|551660_552620_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA	NA
WP_005726327.1|552619_553210_+	sulfoxide reductase heme-binding subunit YedZ	NA	NA	NA	NA	NA
WP_061406003.1|553310_553757_+	YcgN family cysteine cluster protein	NA	NA	NA	NA	NA
WP_061406004.1|554211_556305_+	4-alpha-glucanotransferase	NA	NA	NA	NA	NA
WP_005726331.1|556336_558529_+	1,4-alpha-glucan branching protein GlgB	NA	NA	NA	NA	NA
WP_061406005.1|558572_560591_+	glycogen debranching protein GlgX	NA	NA	NA	NA	NA
WP_005722006.1|560663_561971_+	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA	NA
WP_046333160.1|562050_563493_+	glycogen synthase GlgA	NA	NA	NA	NA	NA
WP_061406006.1|563617_566074_+	glycogen/starch/alpha-glucan phosphorylase	NA	A0A140XAG6	Dickeya_phage	55.4	1.6e-20
WP_061406007.1|566152_567151_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_061406008.1|567178_568018_-	hypothetical protein	NA	F6MIM2	Haemophilus_phage	71.3	1.1e-114
WP_081106265.1|568076_568196_-	Com family DNA-binding transcriptional regulator	NA	F6MIM1	Haemophilus_phage	66.7	1.7e-05
WP_061406009.1|568342_568822_-	hypothetical protein	NA	F6MIM0	Haemophilus_phage	61.4	3.7e-51
WP_061406010.1|568814_569405_-	DUF4376 domain-containing protein	NA	F6MIL9	Haemophilus_phage	52.5	1.3e-53
WP_061406011.1|569412_570834_-	hypothetical protein	NA	Q94MY0	Haemophilus_virus	37.4	2.3e-40
WP_061406012.1|570835_571420_-	DUF2313 domain-containing protein	NA	A0A2I7S9L6	Vibrio_phage	33.7	2.1e-24
WP_061406013.1|571407_572478_-|plate	baseplate J/gp47 family protein	plate	C9DGQ6	Escherichia_phage	38.2	3.6e-62
WP_061406014.1|572477_572888_-	hypothetical protein	NA	A0A0C4UR04	Shigella_phage	37.9	6.0e-18
WP_061406015.1|572895_573423_-|plate	phage baseplate assembly protein V	plate	M1Q572	Vibrio_phage	40.9	5.9e-26
WP_061406016.1|573425_573854_-	hypothetical protein	NA	M4M9L5	Vibrio_phage	39.8	1.4e-14
WP_061406017.1|573853_574558_-|tail	phage tail protein	tail	C9DGQ3	Escherichia_phage	40.1	5.2e-46
WP_061406018.1|574554_575895_-	DNA circularization protein	NA	A0A0C4UR32	Shigella_phage	25.5	1.6e-27
WP_081106279.1|575910_577638_-	tape measure protein	NA	A0A2I7S9D9	Vibrio_phage	36.5	5.8e-54
WP_061406020.1|577841_578201_-	hypothetical protein	NA	A0A0C4UR03	Shigella_phage	49.2	2.1e-19
WP_061406021.1|578210_578558_-|tail	phage tail protein	tail	NA	NA	NA	NA
WP_061406022.1|578567_580040_-|tail	phage tail protein	tail	A0A0C4UQS0	Shigella_phage	49.8	2.5e-122
WP_095261628.1|580039_580213_-	DUF2635 domain-containing protein	NA	A0A0C4UR31	Shigella_phage	62.8	1.5e-07
WP_061406023.1|580209_580761_-	DUF1834 family protein	NA	A0A0C4UQU7	Shigella_phage	40.0	1.6e-29
WP_061406024.1|580760_581177_-	DUF1320 family protein	NA	NA	NA	NA	NA
WP_157738557.1|581176_581545_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061406026.1|581800_582724_-|head	head protein	head	A0A0C4UQR9	Shigella_phage	53.3	3.4e-85
WP_061406027.1|582723_583791_-	hypothetical protein	NA	A0A0C4UQU6	Shigella_phage	48.2	1.3e-72
WP_061406028.1|583999_584434_-	phage virion morphogenesis protein	NA	NA	NA	NA	NA
WP_061406029.1|584557_585895_-|head	phage head morphogenesis protein	head	C9DGN7	Escherichia_phage	47.2	1.1e-87
WP_061406030.1|585881_587450_-	DUF935 domain-containing protein	NA	A0A0C4UQR8	Shigella_phage	52.5	3.2e-144
WP_061406429.1|587452_588994_-	hypothetical protein	NA	A0A2I7S9C5	Vibrio_phage	60.7	5.5e-157
WP_061406031.1|589059_589629_-	DUF3486 family protein	NA	M4MCR3	Vibrio_phage	44.8	2.2e-39
WP_061406032.1|589662_589959_-	hypothetical protein	NA	A0A0C4UR00	Shigella_phage	63.4	2.1e-25
WP_061406033.1|589958_590285_-	DUF2730 family protein	NA	NA	NA	NA	NA
WP_061406034.1|590281_590482_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061406035.1|590605_590866_-	DUF2681 domain-containing protein	NA	NA	NA	NA	NA
WP_061406036.1|590849_591110_-	DUF2644 domain-containing protein	NA	F6MIK0	Haemophilus_phage	78.9	1.4e-25
WP_157738556.1|591106_591268_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061406037.1|591270_591771_-	N-acetylmuramoyl-L-alanine amidase	NA	F6MIJ9	Haemophilus_phage	66.7	1.8e-69
WP_061406038.1|591853_592276_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_061406039.1|592272_592767_-	regulatory protein GemA	NA	A0A0C4UQU3	Shigella_phage	34.2	1.8e-13
WP_061406040.1|592840_593542_-	DUF2786 domain-containing protein	NA	L7P7W8	Pseudomonas_phage	31.0	2.3e-17
WP_061406041.1|593550_593766_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061406042.1|593782_593974_-	ANR family transcriptional regulator	NA	NA	NA	NA	NA
WP_061406043.1|594049_594568_-	host-nuclease inhibitor protein Gam	NA	C9DGL8	Escherichia_phage	64.3	2.3e-54
WP_046339044.1|594560_594800_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061406044.1|594796_595072_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061406045.1|595089_595293_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061406046.1|595292_596210_-	AAA family ATPase	NA	M4M9P4	Vibrio_phage	41.7	3.1e-62
WP_061406047.1|596220_598209_-	DDE endonuclease	NA	C9DGL1	Escherichia_phage	44.7	1.1e-154
WP_046338746.1|598253_598520_-	transcriptional regulator	NA	F6MII4	Haemophilus_phage	63.4	1.2e-19
WP_061406048.1|598696_599404_+	helix-turn-helix transcriptional regulator	NA	F6MII3	Haemophilus_phage	48.4	9.9e-53
>prophage 2
NZ_CP007205	Pasteurella multocida subsp. multocida PMTB2.1, complete genome	2315138	643501	730776	2315138	terminase,protease,portal,holin,tRNA,tail	Mannheimia_phage(17.14%)	86	NA	NA
WP_005753986.1|643501_644563_+|protease	protease SohB	protease	A0A219YA27	Aeromonas_phage	23.3	2.3e-05
WP_005726415.1|644803_645622_+	OmpA family protein	NA	NA	NA	NA	NA
WP_005726416.1|645675_646542_-	fructosamine kinase family protein	NA	NA	NA	NA	NA
WP_005751445.1|646796_648299_+	sodium/proline symporter PutP	NA	NA	NA	NA	NA
WP_061406056.1|648371_651968_+	bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA	NA	NA	NA	NA	NA
WP_061406057.1|652062_653187_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005726428.1|653268_654864_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_061406058.1|655198_657130_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	37.4	3.3e-127
WP_061406059.1|657437_658238_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_046333192.1|658541_659138_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_080940655.1|659333_659876_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	34.5	8.2e-15
WP_005596065.1|660267_660465_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_005722169.1|660535_660889_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_095261630.1|661567_661771_+	adhesin	NA	NA	NA	NA	NA
WP_061406060.1|662027_662552_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_005726457.1|662586_663525_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	81.3	6.8e-126
WP_005726458.1|663708_665034_+	chromosome partition protein MukF	NA	NA	NA	NA	NA
WP_061406061.1|665084_665816_+	chromosome partition protein MukE	NA	NA	NA	NA	NA
WP_061406062.1|665815_670297_+	chromosome partition protein MukB	NA	NA	NA	NA	NA
WP_046333200.1|670370_670823_-	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_046333201.1|670964_671831_+	membrane protein	NA	NA	NA	NA	NA
WP_061406063.1|671932_673360_+	exodeoxyribonuclease I	NA	NA	NA	NA	NA
WP_005722182.1|674227_674539_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_005726461.1|674597_674990_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_061406064.1|675002_675281_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061406065.1|675355_677962_-	type I DNA topoisomerase	NA	A0A2K9L1Q2	Tupanvirus	33.8	6.6e-86
WP_061406066.1|678122_678956_-	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_061406067.1|679041_680061_-	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_061406068.1|680213_682823_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	24.9	3.5e-18
WP_005726469.1|682993_683494_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	40.6	2.3e-19
WP_005726470.1|683557_684646_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_061406069.1|684788_685979_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_005751475.1|686040_686493_-	molybdopterin synthase catalytic subunit MoaE	NA	NA	NA	NA	NA
WP_005726473.1|686493_686739_-	molybdopterin synthase sulfur carrier subunit	NA	NA	NA	NA	NA
WP_005726474.1|686751_687228_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_005726475.1|687287_688301_-	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_010906761.1|688673_689600_+	uridine diphosphate-N-acetylglucosamine-binding protein YvcK	NA	A1IMD5	Streptococcus_phage	30.8	3.1e-30
WP_005722210.1|689619_690105_-	endopeptidase	NA	S5MM68	Bacillus_phage	36.6	7.1e-10
WP_005722212.1|690187_690484_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	40.0	4.6e-12
WP_061406070.1|690487_692875_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_005726490.1|692897_693347_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061406071.1|693387_694371_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	36.8	5.4e-33
WP_005726494.1|694549_695068_-	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA	NA
WP_005726495.1|695096_695759_-	TIGR01621 family pseudouridine synthase	NA	NA	NA	NA	NA
WP_061406072.1|695866_696517_+	histidine phosphatase family protein	NA	A0A1X9IGJ2	Lactococcus_phage	32.7	2.6e-07
WP_005726498.1|696547_697876_-	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_005751483.1|697868_698783_-	acetyl-CoA carboxylase, carboxyltransferase subunit beta	NA	NA	NA	NA	NA
WP_005726499.1|698866_699661_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_005726500.1|699819_700662_+	patatin family protein	NA	NA	NA	NA	NA
WP_005725695.1|700933_701191_-	hypothetical protein	NA	A0A0M3LNN9	Mannheimia_phage	60.0	6.2e-21
WP_081106267.1|701180_701768_-	DUF4376 domain-containing protein	NA	A0A0M3LRX2	Mannheimia_phage	33.8	1.4e-31
WP_061406073.1|701778_703503_-|tail	tail fiber protein	tail	Q94MY0	Haemophilus_virus	43.8	2.4e-76
WP_061406074.1|703516_707164_-	host specificity protein J	NA	A0A0R6PIC9	Moraxella_phage	37.8	9.7e-144
WP_134794475.1|707167_707836_-|tail	tail assembly protein	tail	A0A1P8DTG7	Proteus_phage	39.8	1.3e-30
WP_005725305.1|707825_708533_-	C40 family peptidase	NA	A0A1W6JP31	Morganella_phage	45.0	9.3e-51
WP_005725303.1|708534_709185_-|tail	phage minor tail protein L	tail	J9Q7Y5	Salmonella_phage	39.3	1.1e-37
WP_061406075.1|709233_709788_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061406076.1|709862_710210_-|tail	phage tail protein	tail	I6RSL7	Salmonella_phage	36.9	7.6e-14
WP_061406077.1|710209_712606_-	hypothetical protein	NA	H6WRV7	Salmonella_phage	31.3	9.8e-28
WP_081106268.1|712592_712853_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061406079.1|712915_713305_-|tail	phage tail protein	tail	NA	NA	NA	NA
WP_005725361.1|713408_714881_-|portal	phage portal protein	portal	K7PJP3	Enterobacteria_phage	57.4	4.5e-156
WP_042742774.1|714877_715099_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061406080.1|715095_717204_-|terminase	phage terminase large subunit family protein	terminase	K7PH52	Enterobacterial_phage	66.4	9.9e-266
WP_061406081.1|717206_717683_-	DUF1441 family protein	NA	K7PJY2	Enterobacterial_phage	55.6	3.8e-40
WP_005725369.1|717973_718234_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_014391478.1|718270_718639_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005725606.1|718849_719173_-	DUF2570 family protein	NA	NA	NA	NA	NA
WP_005725607.1|719145_719676_-	lysozyme	NA	A0A0M3LPQ1	Mannheimia_phage	50.9	5.7e-45
WP_014391475.1|719672_719933_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061406082.1|720050_720461_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061406083.1|720555_721176_-	KilA-N domain-containing protein	NA	A0A0P0ZCS0	Stx2-converting_phage	58.9	7.4e-20
WP_061406084.1|721463_722039_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080527702.1|722048_722966_-	DUF4747 family protein	NA	NA	NA	NA	NA
WP_061406085.1|723042_723408_-	hypothetical protein	NA	A0A0M3LR87	Mannheimia_phage	27.3	8.5e-08
WP_061406086.1|723407_724007_-	recombinase NinG	NA	A0A2I7REF6	Vibrio_phage	46.2	2.3e-34
WP_005725600.1|724089_724506_-	recombination protein NinB	NA	Q7Y5V7	Haemophilus_phage	62.1	2.7e-42
WP_061406087.1|724508_725867_-	AAA family ATPase	NA	A0A0M3LQC0	Mannheimia_phage	50.9	4.9e-125
WP_005725515.1|725863_726682_-	hypothetical protein	NA	Q7Y5W1	Haemophilus_phage	57.1	3.1e-74
WP_005725517.1|726759_727005_-	hypothetical protein	NA	A0A0M3LR73	Mannheimia_phage	54.2	2.0e-13
WP_061406088.1|727049_727325_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061406089.1|727346_727553_-	helix-turn-helix transcriptional regulator	NA	A0A0N7C2U7	Escherichia_phage	51.5	1.7e-13
WP_014391095.1|727691_728327_+	hypothetical protein	NA	G9L676	Escherichia_phage	44.8	2.1e-41
WP_061406090.1|728472_729081_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061406091.1|729083_729986_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061406092.1|730239_730776_-	hypothetical protein	NA	Q7Y5W8	Haemophilus_phage	53.1	1.7e-44
>prophage 3
NZ_CP007205	Pasteurella multocida subsp. multocida PMTB2.1, complete genome	2315138	1148291	1157648	2315138		Sinorhizobium_phage(16.67%)	9	NA	NA
WP_005724300.1|1148291_1149566_+	multifunctional CCA addition/repair protein	NA	A0A0F6YPT7	Sinorhizobium_phage	49.2	1.1e-91
WP_061406189.1|1149606_1150224_+	lipoprotein localization protein LolB	NA	NA	NA	NA	NA
WP_005724298.1|1150223_1151111_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
WP_061406190.1|1151180_1152128_+	ribose-phosphate pyrophosphokinase	NA	A0A2K9L2G2	Tupanvirus	38.7	2.5e-43
WP_005724068.1|1152202_1153756_-	murein DD-endopeptidase MepM	NA	A0A2K9VGT1	Pontimonas_phage	49.6	8.4e-20
WP_061406191.1|1153990_1154782_+	zinc ABC transporter ATP-binding protein ZnuC	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	29.7	9.8e-17
WP_005724066.1|1154790_1155576_+	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA	NA
WP_005724065.1|1155652_1156633_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.4	1.3e-15
WP_005724063.1|1156649_1157648_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.4	2.3e-15
