The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP013667	Coxiella burnetii strain 3262 chromosome, complete genome	2093477	500356	569918	2093477	transposase	Streptococcus_phage(40.0%)	60	NA	NA
WP_046036993.1|500356_501376_-|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	26.4	1.8e-10
WP_012220820.1|501551_502466_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	57.7	5.1e-94
WP_010958474.1|502495_502633_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017253405.1|503837_505286_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_005770178.1|505290_506250_-	ribose-phosphate pyrophosphokinase	NA	A0A2K9L2G2	Tupanvirus	35.0	3.2e-38
WP_011996384.1|506424_507057_-	lipoprotein localization protein LolB	NA	NA	NA	NA	NA
WP_010958470.1|507063_508317_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010958469.1|508350_509496_-	CCA-adding protein	NA	S5MVS8	Sinorhizobium_phage	38.6	1.3e-62
WP_040953425.1|509502_510351_+	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
WP_040953427.1|510330_510702_-	Dot/Icm T4SS effector CoxDFB6	NA	NA	NA	NA	NA
WP_040953424.1|511003_512053_-	Dot/Icm T4SS effector CoxH4	NA	NA	NA	NA	NA
WP_010958466.1|512112_512703_+	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	46.4	5.0e-34
WP_005770158.1|512818_513316_+	DUF1778 domain-containing protein	NA	NA	NA	NA	NA
WP_010958464.1|513318_513843_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017253234.1|513859_514993_-	CBU_1819 family Dot/Icm T4SS effector	NA	NA	NA	NA	NA
WP_017253235.1|515045_516491_-	CBU_1818 family Dot/Icm T4SS effector	NA	NA	NA	NA	NA
WP_005770152.1|516712_517678_-	elongation factor P--(R)-beta-lysine ligase	NA	A0A1V0SAC0	Catovirus	27.3	3.5e-24
WP_005772139.1|517682_518249_-	elongation factor P	NA	NA	NA	NA	NA
WP_010958461.1|518320_520309_+	primosomal protein N'	NA	NA	NA	NA	NA
WP_080938447.1|520438_520711_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005772222.1|520707_521727_-|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	26.4	1.8e-10
WP_017252686.1|521830_522544_-	outer membrane beta-barrel protein	NA	NA	NA	NA	NA
WP_012220811.1|522580_522709_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017252685.1|522689_523817_-	4-phosphoerythronate dehydrogenase	NA	NA	NA	NA	NA
WP_017252684.1|523883_525407_+	TolC family protein	NA	NA	NA	NA	NA
WP_012220808.1|525409_526585_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010958456.1|526577_527243_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.0	5.1e-35
WP_080513004.1|527232_528447_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010958454.1|529567_529855_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012220006.1|529934_530207_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040953503.1|530203_531223_-|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	6.7e-10
WP_010958453.1|531307_531691_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005772150.1|531702_531957_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010958452.1|531975_532104_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017252657.1|532293_532932_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017252658.1|532955_533252_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010958450.1|534014_534476_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_017252659.1|534857_536801_-	APC family permease	NA	NA	NA	NA	NA
WP_010958447.1|536929_537370_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_017252661.1|537374_539003_-	amino acid permease	NA	NA	NA	NA	NA
WP_017252662.1|539053_541762_+	DNA polymerase I	NA	A0A2H4J6W7	uncultured_Caudovirales_phage	31.4	6.0e-66
WP_010958443.1|546009_546876_+	CBU_1789 family Dot/Icm type IV secretion system effector	NA	NA	NA	NA	NA
WP_005772156.1|547846_549682_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	43.4	4.7e-131
WP_010958440.1|549718_550921_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_010957319.1|550993_551266_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046036888.1|551262_552282_-|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	6.7e-10
WP_080513002.1|552480_554499_+	transketolase	NA	NA	NA	NA	NA
WP_010958438.1|554513_555518_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010958437.1|555589_556804_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_180991540.1|556811_558245_+	pyruvate kinase	NA	NA	NA	NA	NA
WP_012220006.1|559998_560271_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040953503.1|560267_561287_-|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	6.7e-10
WP_005770375.1|561456_562548_+	fructose-bisphosphate aldolase class II	NA	NA	NA	NA	NA
WP_010958434.1|562607_562793_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012220794.1|563894_564278_-	SEL1-like repeat protein	NA	NA	NA	NA	NA
WP_012220792.1|564547_565165_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_010958432.1|565399_567145_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010958431.1|567243_568560_+	nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	39.5	3.0e-34
WP_010957319.1|568629_568902_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040953503.1|568898_569918_-|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	6.7e-10
>prophage 2
NZ_CP013667	Coxiella burnetii strain 3262 chromosome, complete genome	2093477	687083	737607	2093477	transposase,protease	Streptococcus_phage(71.43%)	50	NA	NA
WP_040953503.1|687083_688103_-|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	6.7e-10
WP_010958348.1|688344_688440_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017252654.1|688494_690939_-	type IVB secretion system protein DotA	NA	NA	NA	NA	NA
WP_010958350.1|690935_691430_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017252655.1|691619_692069_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017252656.1|692065_692524_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010958351.1|692539_693670_+	phosphoesterase	NA	NA	NA	NA	NA
WP_046036888.1|694224_695244_+|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	6.7e-10
WP_010957319.1|695240_695513_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010958352.1|695693_695876_+	virulence factor	NA	NA	NA	NA	NA
WP_010958353.1|695900_697391_-	bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE	NA	E3SJ88	Synechococcus_phage	44.6	1.2e-15
WP_040953503.1|697622_698642_+|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	6.7e-10
WP_012220006.1|698638_698911_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040953397.1|699138_700335_+	CBU_1639 family Dot/Icm T4SS effector	NA	NA	NA	NA	NA
WP_010958343.1|700446_701652_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_017253150.1|701736_702912_+	Dot/Icm T4SS effector CoxCC14	NA	NA	NA	NA	NA
WP_005769595.1|703540_703690_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010958340.1|703686_704403_+	Dot/Icm secretion system protein IcmQ	NA	NA	NA	NA	NA
WP_010958339.1|704403_705567_+	type IVB secretion system coupling complex protein DotM/IcmP	NA	NA	NA	NA	NA
WP_010958338.1|705542_707921_+	TraM recognition domain-containing protein	NA	NA	NA	NA	NA
WP_017253152.1|707930_708590_+	OmpA family protein	NA	NA	NA	NA	NA
WP_005769604.1|708595_709219_+	type IVB secretion system apparatus protein IcmL.2	NA	NA	NA	NA	NA
WP_010958336.1|709220_709877_+	type IVB secretion system apparatus protein IcmL.1	NA	NA	NA	NA	NA
WP_012569740.1|709887_710943_+	DotH/IcmK family type IV secretion protein	NA	NA	NA	NA	NA
WP_080713332.1|710929_714049_+	type IVB secretion system protein DotG/IcmE	NA	NA	NA	NA	NA
WP_010958333.1|714066_714801_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010958332.1|714871_715381_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005769614.1|715474_715891_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010958331.1|715903_716542_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_010958330.1|716614_719626_+	type IVa secretion system protein IcmB	NA	NA	NA	NA	NA
WP_005769621.1|719640_719778_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040953395.1|719995_720202_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012220725.1|720222_720522_-	hypothetical protein	NA	NA	NA	NA	NA
WP_026051240.1|720578_720926_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017253183.1|721218_721662_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012220723.1|721833_722436_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010958327.1|723003_723159_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040939795.1|723262_723358_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026051241.1|723566_723863_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005772725.1|726550_726949_+	CBU_1607 family Dot/Icm T4SS effector	NA	NA	NA	NA	NA
WP_040953394.1|727348_729445_-	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_010958325.1|729599_730628_-	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_005769646.1|730630_731536_-	30S ribosomal protein S6--L-glutamate ligase	NA	I3ULC9	Synechococcus_phage	34.4	2.2e-36
WP_061299194.1|731532_732018_-|protease	ATP-dependent zinc protease	protease	NA	NA	NA	NA
WP_010957319.1|732211_732484_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040953503.1|732480_733500_-|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	6.7e-10
WP_005773037.1|733722_734268_+	porin family protein	NA	NA	NA	NA	NA
WP_040953392.1|735016_736231_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010957319.1|736318_736591_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005772222.1|736587_737607_-|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	26.4	1.8e-10
>prophage 3
NZ_CP013667	Coxiella burnetii strain 3262 chromosome, complete genome	2093477	743223	795316	2093477	transposase,holin,tRNA	Streptococcus_phage(45.45%)	51	NA	NA
WP_040953503.1|743223_744243_+|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	6.7e-10
WP_080938449.1|744239_744512_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012220714.1|745981_746287_+|holin	bacteriophage holin	holin	NA	NA	NA	NA
WP_010958318.1|746407_748714_+	putative monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA	NA
WP_010958317.1|748710_749118_+	Na+/H+ antiporter subunit B	NA	NA	NA	NA	NA
WP_005772121.1|749114_749486_+	NADH-quinone oxidoreductase subunit K	NA	NA	NA	NA	NA
WP_017253377.1|749482_750982_+	Na+/H+ antiporter subunit D	NA	NA	NA	NA	NA
WP_010958315.1|750978_751326_+	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
WP_010958314.1|751322_751625_+	sodium:proton antiporter	NA	NA	NA	NA	NA
WP_010958313.1|751617_751998_+	monovalent cation/H(+) antiporter subunit G	NA	NA	NA	NA	NA
WP_010958312.1|752038_752161_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010958311.1|752571_753669_-	cell division protein ZapE	NA	NA	NA	NA	NA
WP_010958310.1|753665_754259_-	NAD(P)H:quinone oxidoreductase	NA	NA	NA	NA	NA
WP_017252888.1|754369_755206_+	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_010958309.1|755208_756153_+	L,D-transpeptidase family protein	NA	NA	NA	NA	NA
WP_040953390.1|756118_758638_-	CBU_1576 family Dot/Icm T4SS effector	NA	NA	NA	NA	NA
WP_040953503.1|758829_759849_+|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	6.7e-10
WP_012220006.1|759845_760118_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005772109.1|760159_760603_-	protein TolR	NA	NA	NA	NA	NA
WP_005772108.1|760580_761294_-	protein TolQ	NA	NA	NA	NA	NA
WP_040953503.1|762793_763813_+|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	6.7e-10
WP_012220006.1|763809_764082_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005772105.1|764167_765223_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	27.4	1.0e-05
WP_005772102.1|767083_767686_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010958304.1|767682_768201_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_017252979.1|768316_769051_-	Dot/Icm type IV secretion system effector transcriptional regulator CvpC	NA	NA	NA	NA	NA
WP_010958303.1|769066_770899_-|tRNA	aspartate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_012220710.1|770993_771869_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040953389.1|772546_773539_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080512995.1|773535_774324_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010958301.1|774406_774532_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010958300.1|774580_774673_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017252983.1|774841_775471_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	25.0	3.7e-11
WP_005772089.1|775467_775743_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_010958299.1|775969_777673_-	Dot/Icm T4SS effector CoxCC11	NA	NA	NA	NA	NA
WP_040953472.1|777782_778928_-|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_012220006.1|779124_779397_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010958298.1|780592_781798_-	ribonucleotide-diphosphate reductase subunit beta	NA	A0A060BQZ3	Podovirus	29.5	7.9e-34
WP_010958297.1|781847_784673_-	ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4P767	Pseudomonas_phage	43.6	2.3e-177
WP_010958296.1|784694_784796_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040953388.1|784848_784959_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026051176.1|785045_785555_+	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_026051177.1|785562_787836_+	phosphoenolpyruvate--protein phosphotransferase	NA	A0A1V0SGR7	Hokovirus	29.1	3.1e-15
WP_005772080.1|787890_788676_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
WP_010958292.1|788677_789052_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005772639.1|789048_789843_+	thymidylate synthase	NA	A6M9A2	Geobacillus_virus	66.3	2.6e-110
WP_005772222.1|790814_791834_+|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	26.4	1.8e-10
WP_012220006.1|791830_792103_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012220701.1|793372_793939_+	Dot/Icm T4SS effector CoxCC10	NA	NA	NA	NA	NA
WP_012220006.1|794027_794300_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040953503.1|794296_795316_-|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	6.7e-10
>prophage 4
NZ_CP013667	Coxiella burnetii strain 3262 chromosome, complete genome	2093477	805692	855272	2093477	transposase,tRNA	Streptococcus_phage(42.86%)	50	NA	NA
WP_040953503.1|805692_806712_+|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	6.7e-10
WP_080938449.1|806708_806981_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017253419.1|809169_811080_+	S9 family peptidase	NA	NA	NA	NA	NA
WP_017253417.1|811251_812631_-	DUF1460 domain-containing protein	NA	NA	NA	NA	NA
WP_010958280.1|812702_812798_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012220693.1|812850_814527_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012220692.1|814580_815876_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040947956.1|816712_816946_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010958278.1|817323_817758_+	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_005772051.1|817762_818020_+	glutaredoxin 3	NA	V9QKN6	Rhizobium_phage	44.6	4.1e-09
WP_005772050.1|818032_818518_+	protein-export chaperone SecB	NA	NA	NA	NA	NA
WP_010958277.1|818586_819585_+	NAD(P)-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_017253414.1|819612_820071_-|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
WP_012220690.1|820359_820611_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005772046.1|820774_820993_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017253411.1|820996_821689_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_026051283.1|821807_822581_+	SDR family NAD(P)-dependent oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	29.3	8.1e-08
WP_010958273.1|822588_823302_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005772043.1|823298_824084_-	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_005772042.1|824232_825183_+	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA	NA
WP_040953384.1|825158_826508_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	M1IAK8	Acanthocystis_turfacea_Chlorella_virus	22.4	5.8e-09
WP_010958272.1|826585_828217_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_080512994.1|828239_830468_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	34.0	1.5e-94
WP_010958270.1|830484_830922_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_040953503.1|831035_832055_+|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	6.7e-10
WP_012220006.1|832051_832324_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080713330.1|832431_834276_+	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	25.9	9.6e-23
WP_017253496.1|834272_835043_+	signal peptidase I	NA	NA	NA	NA	NA
WP_010958268.1|835063_835765_+	ribonuclease III	NA	A0A0P0CQ80	Ostreococcus_lucimarinus_virus	34.2	4.3e-24
WP_010958267.1|835761_836649_+	GTPase Era	NA	NA	NA	NA	NA
WP_012220685.1|836645_837350_+	DNA repair protein RecO	NA	NA	NA	NA	NA
WP_012220006.1|837381_837654_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040953503.1|837650_838670_-|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	6.7e-10
WP_005772029.1|840065_840197_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012220684.1|840274_841675_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012220683.1|841697_842561_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040953381.1|842642_843365_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_040948181.1|843383_844106_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040948180.1|844136_844394_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012220006.1|844577_844850_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005772222.1|844846_845866_-|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	26.4	1.8e-10
WP_012220681.1|845864_846104_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012220680.1|846269_847943_-	CBU_1493 family Dot/Icm T4SS effector	NA	NA	NA	NA	NA
WP_040953472.1|848270_849416_-|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_010958264.1|849774_850113_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A222YWE2	Escherichia_phage	41.9	3.5e-08
WP_010958263.1|850118_850430_+	HigA family addiction module antidote protein	NA	M9MUN2	Rhodococcus_phage	45.3	7.0e-11
WP_010958262.1|850498_851230_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA	NA
WP_010958261.1|851386_852784_+|tRNA	glutamate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010958260.1|852774_854157_+|tRNA	cysteine--tRNA ligase	tRNA	A0A2K9L6B7	Tupanvirus	28.6	7.6e-49
WP_005772222.1|854252_855272_+|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	26.4	1.8e-10
>prophage 5
NZ_CP013667	Coxiella burnetii strain 3262 chromosome, complete genome	2093477	866745	933714	2093477	transposase,protease,tRNA	Streptococcus_phage(40.0%)	59	NA	NA
WP_046036891.1|866745_867765_+|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	6.7e-10
WP_012220006.1|867761_868034_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005772006.1|868202_869636_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
WP_005772005.1|869640_871092_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_005772004.1|871095_871395_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_040953378.1|871542_871743_-	hypothetical protein	NA	NA	NA	NA	NA
WP_026051278.1|871956_873003_+	rod shape-determining protein	NA	NA	NA	NA	NA
WP_017253387.1|873085_873964_+	rod shape-determining protein MreC	NA	NA	NA	NA	NA
WP_010958247.1|873969_874458_+	rod shape-determining protein MreD	NA	NA	NA	NA	NA
WP_040953377.1|874457_877919_+	DUF3971 domain-containing protein	NA	NA	NA	NA	NA
WP_010958245.1|877989_879423_+|protease	metalloprotease TldD	protease	NA	NA	NA	NA
WP_005772705.1|879399_879741_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017253385.1|879745_880204_-	EVE domain-containing protein	NA	NA	NA	NA	NA
WP_005772706.1|880508_880793_+	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	55.1	7.1e-18
WP_010958243.1|880795_880993_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040953503.1|881392_882412_+|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	6.7e-10
WP_012220006.1|882408_882681_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040953376.1|882714_882879_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040947945.1|885695_886481_+	Dot/Icm T4SS effector CoxCC7	NA	NA	NA	NA	NA
WP_005771989.1|887005_887152_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010958239.1|887274_888435_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_046036970.1|888619_890644_+	Dot/Icm type IV secretion system effector CoxTRP1	NA	NA	NA	NA	NA
WP_040953374.1|891156_891672_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080713326.1|891664_893476_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040953373.1|893466_894774_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040939758.1|894751_895237_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012220665.1|895365_896934_+	SurA N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_005769081.1|897786_898554_+	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_005769079.1|898535_898832_+	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_010958235.1|899122_899485_+	NADH-quinone oxidoreductase subunit A	NA	NA	NA	NA	NA
WP_005769074.1|899489_899975_+	NADH-quinone oxidoreductase subunit B	NA	NA	NA	NA	NA
WP_012220664.1|899984_900668_+	NADH-quinone oxidoreductase subunit C	NA	NA	NA	NA	NA
WP_078068422.1|900639_901914_+	NADH-quinone oxidoreductase subunit D	NA	NA	NA	NA	NA
WP_017252939.1|901913_902438_+	NADH-quinone oxidoreductase subunit NuoE	NA	NA	NA	NA	NA
WP_010958231.1|902427_903696_+	NADH-quinone oxidoreductase subunit NuoF	NA	NA	NA	NA	NA
WP_012220661.1|903806_906170_+	NADH-quinone oxidoreductase subunit G	NA	NA	NA	NA	NA
WP_005769061.1|906169_907192_+	NADH-quinone oxidoreductase subunit NuoH	NA	NA	NA	NA	NA
WP_012220660.1|907188_907680_+	NADH-quinone oxidoreductase subunit NuoI	NA	NA	NA	NA	NA
WP_005769059.1|907693_908299_+	NADH-quinone oxidoreductase subunit J	NA	NA	NA	NA	NA
WP_005769056.1|908295_908601_+	NADH-quinone oxidoreductase subunit NuoK	NA	NA	NA	NA	NA
WP_012220659.1|908657_910619_+	NADH-quinone oxidoreductase subunit L	NA	NA	NA	NA	NA
WP_010958227.1|910623_912144_+	NADH-quinone oxidoreductase subunit M	NA	NA	NA	NA	NA
WP_010958226.1|912153_913602_+	NADH-quinone oxidoreductase subunit NuoN	NA	NA	NA	NA	NA
WP_010958225.1|913979_914441_+	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_017252940.1|914444_915956_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_012220657.1|915961_918373_+	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	24.5	4.2e-26
WP_005769039.1|918460_918820_+	ribosome-binding factor A	NA	NA	NA	NA	NA
WP_017252941.1|918797_919727_+|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_010957319.1|920258_920531_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046036967.1|920527_921547_-|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	3.9e-10
WP_017253499.1|921898_922444_-	DUF962 domain-containing protein	NA	NA	NA	NA	NA
WP_010957319.1|922560_922833_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040953503.1|922829_923849_-|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	6.7e-10
WP_005772424.1|928469_929861_-	sugar porter family MFS transporter	NA	O13311	Aichi_virus	29.1	3.4e-28
WP_010957521.1|929901_930585_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_010957522.1|930577_931282_-	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	A0A1B1IVA4	uncultured_Mediterranean_phage	32.7	2.8e-07
WP_010957523.1|931268_931622_-	Hpt domain-containing protein	NA	NA	NA	NA	NA
WP_010957524.1|931667_932561_-	cation transporter	NA	A0A1V0SED0	Indivirus	30.4	3.7e-12
WP_005769160.1|932697_933714_-|protease	protease SohB	protease	A0A2H4UUF9	Bodo_saltans_virus	27.5	6.0e-19
>prophage 6
NZ_CP013667	Coxiella burnetii strain 3262 chromosome, complete genome	2093477	1084544	1142841	2093477	transposase,protease,tRNA	Streptococcus_phage(35.71%)	56	NA	NA
WP_046036942.1|1084544_1085564_+|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	26.4	1.8e-10
WP_012220006.1|1085560_1085833_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040953351.1|1085959_1087630_-	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_041952469.1|1087634_1088534_-	NAD(+) kinase	NA	NA	NA	NA	NA
WP_010958133.1|1088543_1088873_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_005770889.1|1088862_1089240_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_010958132.1|1089294_1089921_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_012220588.1|1090050_1091448_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_005770884.1|1091450_1092044_-	biotin/lipoyl-binding protein	NA	NA	NA	NA	NA
WP_005770882.1|1092209_1094180_+	molecular chaperone DnaK	NA	G8DDB7	Micromonas_pusilla_virus	52.3	5.8e-151
WP_010958131.1|1094324_1095449_+	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	28.7	2.0e-23
WP_011997058.1|1097368_1098751_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_005770872.1|1100174_1101485_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_010958127.1|1103257_1104466_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	34.6	3.8e-52
WP_040953349.1|1104547_1107769_+	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_017253300.1|1107818_1108058_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010958124.1|1108279_1108801_+	transcription elongation factor GreA	NA	NA	NA	NA	NA
WP_005772526.1|1109134_1109737_-	exopolysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_010958122.1|1109724_1110282_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_010958121.1|1110292_1111000_-	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA	NA
WP_010958120.1|1111062_1111869_+	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.4	4.8e-11
WP_005770856.1|1111899_1113108_+	D-galactonate dehydratase family protein	NA	Q6A202	Oenococcus_phage	30.4	1.6e-47
WP_010958119.1|1113101_1113584_+|protease	protease inhibitor I42 family protein	protease	NA	NA	NA	NA
WP_010958118.1|1113585_1114848_-	6-phosphofructokinase	NA	NA	NA	NA	NA
WP_017253299.1|1115120_1115237_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046036920.1|1115328_1116348_+|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	6.7e-10
WP_012220006.1|1116344_1116617_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040953348.1|1116770_1117262_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_010958115.1|1117268_1118342_+	CBU_1268 family Dot/Icm T4SS effector	NA	NA	NA	NA	NA
WP_010958114.1|1118397_1118490_-	protein ScvA	NA	NA	NA	NA	NA
WP_012220577.1|1118533_1120582_-	LssY C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010957319.1|1120687_1120960_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040953503.1|1120956_1121976_-|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	6.7e-10
WP_017252813.1|1122065_1123013_-	lipoyl synthase	NA	NA	NA	NA	NA
WP_040953347.1|1122942_1123671_-	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_012220575.1|1124276_1124663_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005770832.1|1124686_1124950_-	DUF493 domain-containing protein	NA	NA	NA	NA	NA
WP_010958109.1|1124946_1126203_-	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	42.0	4.8e-66
WP_011997045.1|1126300_1127047_-	outer membrane beta-barrel protein	NA	NA	NA	NA	NA
WP_010957319.1|1127436_1127709_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040953503.1|1127705_1128725_-|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	6.7e-10
WP_005770826.1|1128856_1130455_-	Na+/H+ antiporter	NA	A0A2H4J178	uncultured_Caudovirales_phage	30.4	7.3e-11
WP_010958107.1|1130590_1131025_+	nucleoside-diphosphate kinase	NA	A0A167REB2	Powai_lake_megavirus	41.7	7.2e-22
WP_010958106.1|1131010_1131415_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_005770820.1|1131407_1131524_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012220574.1|1131555_1132359_+	polyprenyl synthetase family protein	NA	NA	NA	NA	NA
WP_005772782.1|1132701_1134228_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_012220573.1|1134459_1134897_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010958104.1|1135121_1136234_+|tRNA	bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN	tRNA	NA	NA	NA	NA
WP_010958103.1|1137083_1137224_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010958102.1|1137360_1137972_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010958101.1|1137968_1139234_+|tRNA	histidine--tRNA ligase	tRNA	A0A2I2L577	Orpheovirus	25.9	2.6e-19
WP_017252788.1|1139256_1139877_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_005770802.1|1140102_1141434_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_012220006.1|1141552_1141825_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040953503.1|1141821_1142841_-|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	6.7e-10
>prophage 7
NZ_CP013667	Coxiella burnetii strain 3262 chromosome, complete genome	2093477	1305026	1348106	2093477	transposase,tRNA	Streptococcus_phage(25.0%)	47	NA	NA
WP_040939595.1|1305026_1305428_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_012220327.1|1305569_1306403_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005771808.1|1306710_1306854_-	hypothetical protein	NA	NA	NA	NA	NA
WP_152630347.1|1307078_1307315_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010957754.1|1307845_1308481_-	response regulator	NA	NA	NA	NA	NA
WP_012220329.1|1308539_1309868_-	MFS transporter	NA	NA	NA	NA	NA
WP_017252803.1|1309839_1310250_-	DUF3775 domain-containing protein	NA	NA	NA	NA	NA
WP_017252947.1|1311660_1312863_+	type III PLP-dependent enzyme	NA	A0A2K9L4I2	Tupanvirus	28.4	2.1e-26
WP_010957761.1|1312886_1313948_+	deoxyhypusine synthase	NA	NA	NA	NA	NA
WP_005771798.1|1313947_1314829_+	agmatinase	NA	NA	NA	NA	NA
WP_010957760.1|1314884_1315310_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010957759.1|1315306_1315591_-	membrane protein	NA	NA	NA	NA	NA
WP_094322076.1|1315927_1316248_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052293388.1|1316229_1316580_-	hypothetical protein	NA	NA	NA	NA	NA
WP_161793206.1|1316557_1317229_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080692293.1|1317173_1317494_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017252853.1|1317641_1318562_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_017252776.1|1319739_1320957_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A067ZJB6	Vibrio_phage	30.6	2.7e-13
WP_032138365.1|1320994_1323046_+	PAS domain-containing hybrid sensor histidine kinase/response regulator	NA	A0A1V0SGX0	Hokovirus	29.9	6.2e-47
WP_040953320.1|1323106_1324834_+	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	34.7	1.4e-84
WP_017252775.1|1324837_1325773_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_012220006.1|1325883_1326156_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046036926.1|1326152_1327172_-|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	5.1e-10
WP_010957995.1|1327324_1327663_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017252705.1|1327735_1328218_+	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_010957993.1|1328295_1328892_+	CBU_1079 family Dot/Icm type IV secretion system effector	NA	NA	NA	NA	NA
WP_005768322.1|1328899_1329238_+	DUF1820 family protein	NA	NA	NA	NA	NA
WP_040953319.1|1329241_1330183_+	beta-N-acetylhexosaminidase	NA	A0A1B1IVS3	uncultured_Mediterranean_phage	30.6	2.3e-12
WP_046036886.1|1330324_1331344_+|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	26.4	1.8e-10
WP_010957319.1|1331340_1331613_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040947860.1|1331830_1332982_+	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_010957989.1|1332968_1333529_+	hypoxanthine-guanine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	27.1	2.2e-07
WP_017252872.1|1333550_1334057_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010957987.1|1334060_1335218_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	34.8	9.2e-56
WP_017252873.1|1335382_1335811_+	DoxX family protein	NA	NA	NA	NA	NA
WP_124224376.1|1335828_1336608_-	adenylate/guanylate cyclase domain-containing protein	NA	NA	NA	NA	NA
WP_129545642.1|1337877_1338135_-	adenylate/guanylate cyclase domain-containing protein	NA	NA	NA	NA	NA
WP_012220345.1|1339937_1340708_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	51.7	5.7e-70
WP_040953318.1|1340704_1342486_-	SLC13 family permease	NA	Q6A201	Oenococcus_phage	30.1	4.6e-14
WP_011996944.1|1342557_1343112_+	RNA 2',3'-cyclic phosphodiesterase	NA	NA	NA	NA	NA
WP_005768280.1|1343139_1343424_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012220346.1|1343429_1344836_-	CBU_1063 family Dot/Icm T4SS effector	NA	NA	NA	NA	NA
WP_080713307.1|1344969_1345572_-	DUF1601 domain-containing protein	NA	NA	NA	NA	NA
WP_046036891.1|1345730_1346750_+|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	6.7e-10
WP_012220006.1|1346746_1347019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080713297.1|1347159_1347726_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_005769011.1|1347674_1348106_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
>prophage 8
NZ_CP013667	Coxiella burnetii strain 3262 chromosome, complete genome	2093477	1612847	1675400	2093477	transposase,protease,tRNA	Streptococcus_phage(18.18%)	57	NA	NA
WP_040953503.1|1612847_1613867_+|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	6.7e-10
WP_012220006.1|1613863_1614136_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010957961.1|1614593_1615985_+	DUF853 family protein	NA	A0A248XCZ8	Klebsiella_phage	45.1	6.4e-80
WP_040953312.1|1616000_1616903_-	transglutaminase domain-containing protein	NA	NA	NA	NA	NA
WP_080512968.1|1616988_1617735_-	AMP-binding protein	NA	A0A2K9L3I8	Tupanvirus	40.2	2.1e-24
WP_052366694.1|1617736_1618321_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010957963.1|1618743_1619184_+	glycoside hydrolase family protein	NA	A0A0H4A794	Pseudoalteromonas_phage	42.3	1.2e-19
WP_012220363.1|1619477_1620041_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017253471.1|1620232_1620868_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_012220361.1|1620914_1622321_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	42.3	2.4e-90
WP_061301491.1|1624309_1624582_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046036920.1|1624578_1625598_-|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	6.7e-10
WP_010957966.1|1625803_1626139_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_005768678.1|1626135_1626732_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_005768680.1|1626728_1628735_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_026051170.1|1628754_1629651_-	COX aromatic rich motif-containing protein	NA	NA	NA	NA	NA
WP_012220359.1|1629658_1629814_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005768686.1|1629807_1630209_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010957969.1|1630251_1630896_-	response regulator	NA	NA	NA	NA	NA
WP_005768694.1|1633420_1633534_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012220355.1|1635646_1636228_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040953315.1|1636647_1637916_-	hypothetical protein	NA	NA	NA	NA	NA
WP_026051257.1|1638525_1638738_-	carbon storage regulator CsrA	NA	A0A2I7RT00	Vibrio_phage	70.6	1.7e-13
WP_010957971.1|1638877_1640107_-	aspartate kinase	NA	NA	NA	NA	NA
WP_040953316.1|1640112_1642710_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	40.1	5.4e-88
WP_010957973.1|1642702_1643137_-	regulatory protein RecX	NA	NA	NA	NA	NA
WP_005772330.1|1643133_1644165_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	61.7	1.7e-114
WP_005768715.1|1644252_1644753_-	CinA family protein	NA	B5TK85	Pseudomonas_phage	44.4	1.6e-28
WP_017253271.1|1644887_1647503_+	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	24.2	9.7e-37
WP_010957975.1|1647499_1648243_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_012220351.1|1648255_1649542_+	flavohemoglobin expression-modulating QEGLA motif protein	NA	NA	NA	NA	NA
WP_012220350.1|1649512_1650247_-	pseudouridine synthase	NA	NA	NA	NA	NA
WP_012220349.1|1650256_1650886_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	37.0	6.6e-24
WP_017253273.1|1650890_1651718_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	24.2	4.2e-10
WP_010957319.1|1651868_1652141_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046036917.1|1652137_1653157_-|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	6.7e-10
WP_012220489.1|1653308_1654076_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_080713296.1|1654186_1655170_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA	NA
WP_005769017.1|1655141_1655849_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
WP_005772880.1|1656009_1657365_+	Do family serine endopeptidase	NA	W5SAB9	Pithovirus	32.0	4.7e-11
WP_017252708.1|1657364_1658411_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_040953276.1|1658458_1661527_+	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	22.9	2.3e-69
WP_040953503.1|1661742_1662762_+|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	6.7e-10
WP_010957319.1|1662758_1663031_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099126537.1|1663218_1664076_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_005771755.1|1664130_1665435_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_040953274.1|1665585_1666560_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	36.2	3.4e-43
WP_010957775.1|1666561_1667059_+	3-deoxy-manno-octulosonate-8-phosphatase KdsC	NA	A0A140XBD6	Dickeya_phage	50.4	1.1e-29
WP_005772879.1|1667074_1667662_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_005771762.1|1667624_1668140_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_026051163.1|1668145_1668892_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.5	3.6e-21
WP_005771766.1|1668990_1669281_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA	NA
WP_005771767.1|1669280_1669859_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_005771768.1|1669839_1670109_+	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
WP_010957771.1|1670333_1671656_-|protease	metalloprotease PmbA	protease	NA	NA	NA	NA
WP_040953273.1|1671664_1674118_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	49.9	3.6e-211
WP_005771771.1|1674131_1675400_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	54.9	2.1e-133
>prophage 9
NZ_CP013667	Coxiella burnetii strain 3262 chromosome, complete genome	2093477	2071315	2080235	2093477		uncultured_Mediterranean_phage(28.57%)	11	NA	NA
WP_012220156.1|2071315_2072095_-	exodeoxyribonuclease III	NA	E3T4M6	Cafeteria_roenbergensis_virus	32.9	7.4e-33
WP_010957485.1|2072122_2072770_+	orotate phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_040947703.1|2072766_2074236_+	CBU_0295 family Dot/Icm type IV secretion system effector	NA	NA	NA	NA	NA
WP_005771434.1|2074232_2075648_-	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	29.9	1.5e-52
WP_010957483.1|2075625_2076111_-	dUTP diphosphatase	NA	Q2NP83	Xanthomonas_phage	58.0	2.5e-47
WP_005771445.1|2077146_2077386_+	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_005771448.1|2077396_2077609_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_005771450.1|2077622_2077868_-	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	51.1	3.3e-16
WP_040953212.1|2077882_2078362_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.6	2.4e-26
WP_005771454.1|2078358_2078919_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	S4VNV0	Pandoravirus	39.2	4.5e-16
WP_041952431.1|2078915_2080235_-	polynucleotide adenylyltransferase PcnB	NA	G3MAR3	Bacillus_virus	31.4	4.3e-25
