The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP014346	Mycoplasma mycoides subsp. mycoides strain T1/44 chromosome, complete genome	1188848	17077	90020	1188848	transposase,protease,tRNA	Bacillus_phage(13.33%)	48	NA	NA
WP_011166223.1|17077_18607_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SEZ7	Hokovirus	35.9	3.0e-78
WP_011166224.1|18810_20457_+	LppA family lipoprotein	NA	NA	NA	NA	NA
WP_011166225.1|20489_22088_+	LppA family lipoprotein	NA	NA	NA	NA	NA
WP_139552542.1|22140_23552_-|transposase	IS3-like element IS1296 family transposase	transposase	A0A1B1P773	Bacillus_phage	48.1	2.3e-64
WP_011166228.1|23627_24614_-	mannitol-1-phosphate 5-dehydrogenase	NA	NA	NA	NA	NA
WP_011166229.1|24614_25412_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011166230.1|25445_25874_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_011166231.1|25873_26632_-	sorbitol-6-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_011166236.1|30176_30404_-	30S ribosomal protein S18	NA	NA	NA	NA	NA
WP_011166237.1|30423_30864_-	single-stranded DNA-binding protein	NA	Q4ZAD5	Staphylococcus_virus	39.6	1.0e-15
WP_011166238.1|30875_31289_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_015545525.1|31494_31704_-	cold-shock protein	NA	A0A1X9IGI9	Lactococcus_phage	51.6	4.2e-12
WP_015545499.1|31889_32489_+	FMN-dependent NADH-azoreductase	NA	NA	NA	NA	NA
WP_015545463.1|32525_33560_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.2	1.2e-33
WP_061104381.1|33607_34474_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
WP_015545413.1|34682_37835_-	STREFT protein	NA	NA	NA	NA	NA
WP_061104382.1|37981_43369_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_011166245.1|43806_44793_+	lactate dehydrogenase	NA	M1I636	Acanthocystis_turfacea_Chlorella_virus	30.9	9.0e-36
WP_011166246.1|44811_45936_+	malate permease	NA	NA	NA	NA	NA
WP_162465383.1|47849_49451_+|transposase	IS1634-like element IS1634 family transposase	transposase	NA	NA	NA	NA
WP_061104383.1|49580_51527_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	E5EQ50	Micromonas_sp._RCC1109_virus	46.3	1.7e-102
WP_011166253.1|52586_53792_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	R4TVK3	Phaeocystis_globosa_virus	26.4	1.4e-11
WP_015545419.1|53794_54622_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011166255.1|54673_55396_-|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	tRNA	NA	NA	NA	NA
WP_011166256.1|55395_56136_-	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_061104384.1|56113_56755_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	44.4	2.7e-41
WP_015545330.1|57348_59295_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.8	2.8e-41
WP_015545301.1|59376_59820_-	nucleoside deaminase	NA	NA	NA	NA	NA
WP_015545495.1|59960_60923_-	GMP reductase	NA	Q4ZCY7	Staphylococcus_virus	63.6	3.6e-114
WP_011166263.1|62349_64425_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011166264.1|64602_65052_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_015545481.1|65122_66865_+	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_145837449.1|66917_68329_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	47.7	8.6e-64
WP_061104385.1|68397_68580_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162465381.1|68763_69000_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162465384.1|69663_71265_+|transposase	IS1634-like element IS1634 family transposase	transposase	NA	NA	NA	NA
WP_011166272.1|71459_72134_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015545644.1|72316_72607_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011166274.1|72625_73207_+	membrane protein	NA	NA	NA	NA	NA
WP_015545592.1|73321_74434_+	alanine dehydrogenase	NA	NA	NA	NA	NA
WP_015545490.1|74834_75659_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011166277.1|75740_77009_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	46.1	3.3e-75
WP_011166278.1|77110_77425_+	DUF1904 family protein	NA	NA	NA	NA	NA
WP_011166279.1|77426_78401_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_011166280.1|78403_79906_+|tRNA	lysine--tRNA ligase	tRNA	A0A2K9KZX5	Tupanvirus	36.3	3.8e-86
WP_011166282.1|81897_82206_-	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	42.9	3.3e-13
WP_011166283.1|82216_83059_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_162465386.1|88418_90020_+|transposase	IS1634-like element IS1634 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP014346	Mycoplasma mycoides subsp. mycoides strain T1/44 chromosome, complete genome	1188848	117253	202411	1188848	transposase,tRNA	Bacillus_phage(18.18%)	52	NA	NA
WP_162465387.1|117253_118855_-|transposase	IS1634 family transposase	transposase	NA	NA	NA	NA
WP_011166309.1|119468_119684_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_011166310.1|119673_121083_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	34.0	1.8e-45
WP_011166311.1|121084_121483_-	transcription antitermination factor NusB	NA	NA	NA	NA	NA
WP_061104390.1|121494_122613_-	lipoprotein	NA	NA	NA	NA	NA
WP_011166314.1|122638_123508_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	31.5	2.0e-26
WP_011166315.1|123500_124253_-	riboflavin kinase	NA	NA	NA	NA	NA
WP_011166316.1|124466_126602_-	peptidase	NA	NA	NA	NA	NA
WP_015545435.1|126851_128201_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_162465389.1|128360_129962_-|transposase	IS1634-like element IS1634 family transposase	transposase	NA	NA	NA	NA
WP_015545628.1|130074_131055_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_015545309.1|133330_134680_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_011166318.1|134732_135647_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_015545309.1|137922_139272_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_011166318.1|139324_140239_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_061104391.1|140641_141514_-	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	44.2	8.7e-59
WP_011166320.1|141722_142163_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015545528.1|142231_142993_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_011166322.1|143056_144595_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A1V0SKJ1	Klosneuvirus	29.3	1.1e-53
WP_015545552.1|145607_146834_+	threonine ammonia-lyase	NA	A0A1W6JHY1	Lactococcus_phage	27.3	4.1e-14
WP_039275551.1|147051_148632_+	MFS transporter	NA	NA	NA	NA	NA
WP_011166325.1|148643_149504_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_011166326.1|149779_150496_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061104392.1|150812_152228_+	MFS transporter	NA	NA	NA	NA	NA
WP_011166329.1|155587_156079_-	lipoprotein	NA	NA	NA	NA	NA
WP_011166330.1|156158_157571_-|transposase	IS1634-like element ISMmy1 family transposase	transposase	NA	NA	NA	NA
WP_011167170.1|158121_158580_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081093875.1|158714_160067_+	helix-rich protein	NA	NA	NA	NA	NA
WP_011167164.1|163194_164532_-	DUF285 domain-containing protein	NA	NA	NA	NA	NA
WP_061104393.1|164724_165225_-	isochorismatase family protein	NA	A0A2K9L2K0	Tupanvirus	39.7	8.3e-22
WP_015545454.1|165443_166787_+	CoA-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	23.2	2.0e-14
WP_061104394.1|166806_168381_+	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA	NA
WP_015545387.1|168531_170421_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
WP_011167158.1|171647_172628_+	aspartate--ammonia ligase	NA	A0A1C9C5F0	Heterosigma_akashiwo_virus	40.7	7.1e-49
WP_011167156.1|172833_173091_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015545543.1|173122_173293_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162465417.1|173674_175276_-|transposase	IS1634 family transposase	transposase	NA	NA	NA	NA
WP_015545338.1|175946_179714_-	DNA-directed RNA polymerase subunit beta'	NA	A0A0N9QZ01	Chrysochromulina_ericina_virus	25.7	9.9e-59
WP_061104395.1|179725_183601_-	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	26.0	7.4e-49
WP_015545323.1|183590_184766_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061104396.1|184936_185305_-	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
WP_011167150.1|185373_185871_-	50S ribosomal protein L10	NA	NA	NA	NA	NA
WP_011167149.1|186192_187428_-	DUF285 domain-containing protein	NA	NA	NA	NA	NA
WP_039275908.1|188536_188914_-	DUF285 domain-containing protein	NA	NA	NA	NA	NA
WP_162492354.1|189084_190686_-|transposase	IS1634 family transposase	transposase	NA	NA	NA	NA
WP_162492355.1|193326_193605_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045596717.1|194169_195144_-	transglutaminase	NA	NA	NA	NA	NA
WP_015545311.1|195802_196483_-	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_011167140.1|196482_196911_-	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_011167138.1|198891_199233_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015545394.1|199639_200512_+	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	44.6	2.7e-60
WP_162492356.1|200809_202411_+|transposase	IS1634 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP014346	Mycoplasma mycoides subsp. mycoides strain T1/44 chromosome, complete genome	1188848	289675	362557	1188848	transposase	Bacillus_phage(23.08%)	55	NA	NA
WP_162492358.1|289675_291277_+|transposase	IS1634 family transposase	transposase	NA	NA	NA	NA
WP_011167070.1|291285_291576_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061104404.1|291682_293146_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_015545529.1|295519_297286_-	YfcC family protein	NA	NA	NA	NA	NA
WP_039275787.1|297354_298062_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_011167065.1|298033_299128_-	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_011167064.1|299163_299364_-	DUF951 domain-containing protein	NA	NA	NA	NA	NA
WP_015545630.1|300060_300657_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_015545437.1|300760_302341_-	APC family permease	NA	NA	NA	NA	NA
WP_015545684.1|302486_303167_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011167059.1|303138_304677_-	APC family permease	NA	NA	NA	NA	NA
WP_015545297.1|304735_307393_-	HAD-IC family P-type ATPase	NA	M1HI01	Paramecium_bursaria_Chlorella_virus	25.4	9.9e-37
WP_139552596.1|308739_310150_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	47.7	5.0e-64
WP_015545406.1|310201_311608_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011167052.1|312573_313536_+	BspA family leucine-rich repeat surface protein	NA	NA	NA	NA	NA
WP_011166340.1|313550_314519_+	DUF285 domain-containing protein	NA	NA	NA	NA	NA
WP_145837452.1|314557_315969_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	48.5	3.5e-65
WP_011167050.1|316089_318276_+	lipoprotein	NA	NA	NA	NA	NA
WP_011167049.1|318284_318581_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_015545390.1|318659_319103_+	ribose 5-phosphate isomerase B	NA	NA	NA	NA	NA
WP_011167047.1|319086_320328_+	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	51.3	6.1e-98
WP_015545345.1|320427_321051_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_011167045.1|321191_321572_+	MG406 family protein	NA	NA	NA	NA	NA
WP_011167044.1|321589_322453_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
WP_011167043.1|322482_322788_+	ATP synthase subunit C	NA	NA	NA	NA	NA
WP_011167042.1|322816_323362_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
WP_011167041.1|323363_323909_+	F0F1 ATP synthase subunit delta	NA	NA	NA	NA	NA
WP_015545272.1|323920_325498_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
WP_015545588.1|325499_326342_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
WP_015545389.1|326350_327778_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
WP_011167037.1|327777_328077_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061104406.1|330309_331284_-	serine hydrolase	NA	NA	NA	NA	NA
WP_011167027.1|333626_333878_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162465407.1|334114_335716_+|transposase	IS1634 family transposase	transposase	NA	NA	NA	NA
WP_162492353.1|335756_336800_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015545520.1|337124_339953_+	magnesium-translocating P-type ATPase	NA	M1HX51	Paramecium_bursaria_Chlorella_virus	25.3	7.5e-43
WP_011167021.1|340812_340977_+	hypothetical protein	NA	NA	NA	NA	NA
WP_107326326.1|341008_341344_+	membrane arginine transporter	NA	NA	NA	NA	NA
WP_011167032.1|341356_342262_+	carbamate kinase	NA	NA	NA	NA	NA
WP_162465406.1|342425_344027_+|transposase	IS1634-like element IS1634 family transposase	transposase	NA	NA	NA	NA
WP_011167030.1|344237_344966_-	ROK family protein	NA	NA	NA	NA	NA
WP_015545425.1|344968_345205_-	ROK family protein	NA	NA	NA	NA	NA
WP_061104408.1|345366_346341_-	serine hydrolase	NA	NA	NA	NA	NA
WP_039275770.1|346435_346627_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011167016.1|346604_348635_-	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	45.5	8.7e-09
WP_162465405.1|349078_350680_-|transposase	IS1634-like element IS1634 family transposase	transposase	NA	NA	NA	NA
WP_011167014.1|350939_351422_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011167013.1|351421_351868_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	37.8	4.1e-20
WP_011167012.1|351877_353992_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	32.2	1.9e-59
WP_013729883.1|354027_354312_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_011167011.1|354613_355633_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	B5LJM6	Mycobacterium_phage	53.7	1.9e-97
WP_045596645.1|355641_356115_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	R4JF54	Bacillus_phage	35.8	1.0e-13
WP_061104409.1|356101_358264_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	V9VI16	Lactococcus_phage	44.2	1.6e-162
WP_011167008.1|359967_361266_+	adenylosuccinate synthase	NA	L7Y4J5	Megavirus	34.4	2.1e-56
WP_015545429.1|361258_362557_+	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	30.2	5.5e-17
>prophage 4
NZ_CP014346	Mycoplasma mycoides subsp. mycoides strain T1/44 chromosome, complete genome	1188848	391411	435755	1188848	transposase	Planktothrix_phage(100.0%)	23	NA	NA
WP_162465404.1|391411_393013_-|transposase	IS1634-like element IS1634 family transposase	transposase	NA	NA	NA	NA
WP_011166981.1|393234_393969_-	glucosamine-6-phosphate deaminase	NA	NA	NA	NA	NA
WP_041363444.1|396412_397855_+	Myrrcad domain-containing protein	NA	NA	NA	NA	NA
WP_045610421.1|398061_399501_+	Myrrcad domain-containing protein	NA	NA	NA	NA	NA
WP_015545624.1|401346_402786_+	Myrrcad domain-containing protein	NA	NA	NA	NA	NA
WP_080512646.1|402916_404518_-|transposase	IS1634-like element IS1634 family transposase	transposase	NA	NA	NA	NA
WP_011166972.1|404877_406401_+	DUF285 domain-containing protein	NA	NA	NA	NA	NA
WP_045596633.1|408135_409548_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_011166961.1|409667_410069_-	RidA family protein	NA	NA	NA	NA	NA
WP_011166960.1|410078_411269_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_011166968.1|411400_412264_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_011166956.1|412486_413959_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_011166955.1|413969_414719_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	31.4	8.1e-13
WP_162492359.1|414914_416516_+|transposase	IS1634 family transposase	transposase	NA	NA	NA	NA
WP_015545549.1|419384_421424_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162465402.1|422085_423687_+|transposase	IS1634-like element IS1634 family transposase	transposase	NA	NA	NA	NA
WP_011166962.1|424099_425545_+|transposase	IS1634 family transposase	transposase	NA	NA	NA	NA
WP_011166961.1|425664_426066_-	RidA family protein	NA	NA	NA	NA	NA
WP_011166967.1|428480_429914_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_011166955.1|429924_430674_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	31.4	8.1e-13
WP_039275742.1|430637_432470_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_162492250.1|433950_434088_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162492360.1|434153_435755_-|transposase	IS1634 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP014346	Mycoplasma mycoides subsp. mycoides strain T1/44 chromosome, complete genome	1188848	493865	600360	1188848	transposase,tRNA	Bacillus_phage(28.57%)	60	NA	NA
WP_080512646.1|493865_495467_+|transposase	IS1634-like element IS1634 family transposase	transposase	NA	NA	NA	NA
WP_011166888.1|495703_496930_+	energy-coupling factor transporter ATPase	NA	G9BWD6	Planktothrix_phage	32.1	2.1e-18
WP_011166887.1|496917_497829_+	energy-coupling factor transporter ATPase	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	28.1	1.6e-18
WP_011166886.1|497842_498853_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_015545486.1|498855_499611_+|tRNA	tRNA pseudouridine synthase A	tRNA	NA	NA	NA	NA
WP_061104417.1|499705_503851_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_011166883.1|503980_504436_+	50S ribosomal protein L13	NA	NA	NA	NA	NA
WP_011166882.1|504435_504834_+	30S ribosomal protein S9	NA	NA	NA	NA	NA
WP_045596608.1|504992_507797_+	MOLPALP family lipoprotein	NA	NA	NA	NA	NA
WP_015545302.1|508082_510497_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	56.9	7.4e-257
WP_015545496.1|510563_512126_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011166877.1|512214_512694_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011166876.1|512725_513013_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011166875.1|513005_513488_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011166874.1|513489_514377_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	1.5e-21
WP_015545373.1|514607_515705_+	putrescine carbamoyltransferase	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	27.4	1.3e-19
WP_011166871.1|517148_518243_+	agmatine deiminase	NA	M1I5R4	Acanthocystis_turfacea_Chlorella_virus	52.2	8.3e-107
WP_015545551.1|518358_519291_+	carbamate kinase	NA	NA	NA	NA	NA
WP_061104418.1|523240_525136_-	peptidase M13	NA	E3T4I7	Cafeteria_roenbergensis_virus	30.6	1.2e-65
WP_011166863.1|526685_527048_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011166862.1|527071_527293_+	acyl carrier protein	NA	NA	NA	NA	NA
WP_011166861.1|527293_527758_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_015545626.1|528057_528909_-	DegV family EDD domain-containing protein	NA	NA	NA	NA	NA
WP_011166859.1|528919_529759_-	DegV family protein	NA	NA	NA	NA	NA
WP_015545492.1|529833_530442_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015545670.1|530419_531481_+	nicotinate phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_011166856.1|531489_532734_+|tRNA	tyrosine--tRNA ligase	tRNA	K4F5T3	Cronobacter_phage	39.4	4.7e-74
WP_162465396.1|532977_534579_+|transposase	IS1634-like element IS1634 family transposase	transposase	NA	NA	NA	NA
WP_011166855.1|534888_537852_+	DNA polymerase III subunit alpha	NA	A0A291AVZ2	Streptomyces_phage	31.5	7.3e-89
WP_011166854.1|537860_540596_+	DNA polymerase I	NA	F8WQ35	Bacillus_phage	31.0	1.9e-43
WP_061104419.1|540606_541431_+	DNA-formamidopyrimidine glycosylase	NA	A0A127AWE5	Bacillus_phage	25.0	1.1e-13
WP_011166852.1|541587_542772_+	chromosome replication initiation/membrane attachment protein	NA	NA	NA	NA	NA
WP_011166851.1|542781_543720_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_061104420.1|543820_544834_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_011166849.1|544948_546163_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_061104421.1|546339_546843_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011166847.1|546902_549521_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011166846.1|549537_549843_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162465396.1|551654_553256_+|transposase	IS1634-like element IS1634 family transposase	transposase	NA	NA	NA	NA
WP_139552609.1|553350_553461_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_045596594.1|553508_554453_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015545606.1|554527_556360_-	ribonuclease J	NA	NA	NA	NA	NA
WP_011166842.1|556732_556936_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011166841.1|557300_558524_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011166840.1|558816_559704_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011166838.1|563180_563861_+	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA	NA
WP_139552578.1|564059_565459_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	48.0	7.2e-63
WP_061104422.1|573881_575039_+	DUF285 domain-containing protein	NA	NA	NA	NA	NA
WP_011166826.1|575111_575489_+	DUF2130 domain-containing protein	NA	NA	NA	NA	NA
WP_011166824.1|576409_577042_+	hypothetical protein	NA	NA	NA	NA	NA
WP_107326335.1|577387_578674_+	AAA family ATPase	NA	A0A2P0VMS9	Tetraselmis_virus	31.6	8.2e-29
WP_011166822.1|578776_579289_+	SMEK domain-containing protein	NA	NA	NA	NA	NA
WP_011166820.1|580211_582098_-	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_011166819.1|582106_582841_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA	NA
WP_011166818.1|583043_583889_+	class II fructose-bisphosphate aldolase family protein	NA	NA	NA	NA	NA
WP_011166816.1|584883_585111_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039275703.1|586967_589226_+	putative immunoglobulin-blocking virulence protein	NA	NA	NA	NA	NA
WP_011166809.1|589246_591835_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011166808.1|594030_596283_+	putative immunoglobulin-blocking virulence protein	NA	NA	NA	NA	NA
WP_145837453.1|598934_600360_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	48.5	2.1e-65
>prophage 6
NZ_CP014346	Mycoplasma mycoides subsp. mycoides strain T1/44 chromosome, complete genome	1188848	633738	710927	1188848	transposase,protease,tRNA	Bodo_saltans_virus(20.0%)	60	NA	NA
WP_162465408.1|633738_635340_+|transposase	IS1634 family transposase	transposase	NA	NA	NA	NA
WP_011166780.1|635717_635924_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162492361.1|637271_638873_-|transposase	IS1634 family transposase	transposase	NA	NA	NA	NA
WP_015545348.1|639333_640047_+	UMP kinase	NA	NA	NA	NA	NA
WP_011166777.1|640057_640606_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_011166776.1|640607_642272_+|tRNA	arginine--tRNA ligase	tRNA	M1PAX3	Moumouvirus	20.3	2.8e-13
WP_061104426.1|647435_651884_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_011166774.1|651892_652501_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015545258.1|652529_653582_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	36.7	2.7e-22
WP_011166772.1|653590_655975_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_011166771.1|655974_656493_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008362864.1|656507_656687_+	50S ribosomal protein L32	NA	NA	NA	NA	NA
WP_011166770.1|656793_657195_+	division/cell wall cluster transcriptional repressor MraZ	NA	NA	NA	NA	NA
WP_011166769.1|657203_658130_+	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA	NA
WP_061104427.1|658138_659359_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011166766.1|659413_660574_+	cell division protein FtsZ	NA	NA	NA	NA	NA
WP_011166765.1|660585_661002_+	cell division protein SepF	NA	NA	NA	NA	NA
WP_011166764.1|661014_662004_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_015545299.1|662754_665502_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A2I2L3Y0	Orpheovirus	27.1	1.5e-83
WP_011166762.1|665492_666101_+	peptidase A8	NA	NA	NA	NA	NA
WP_011166761.1|666081_667014_+	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	27.8	1.0e-09
WP_039275688.1|667006_668308_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011166759.1|668310_668793_+	dCMP deaminase family protein	NA	A0A0M4K765	Mollivirus	50.0	1.0e-37
WP_011166756.1|669935_670268_+	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA	NA
WP_011166755.1|670454_671402_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_011166754.1|671450_672074_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061104428.1|672724_673744_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015545565.1|674089_674362_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011166752.1|674870_675587_+	DUF285 domain-containing protein	NA	NA	NA	NA	NA
WP_061104429.1|675613_676306_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011166749.1|677353_678766_+|transposase	IS1634-like element ISMmy1 family transposase	transposase	NA	NA	NA	NA
WP_011166748.1|678862_679537_+	lipoprotein	NA	NA	NA	NA	NA
WP_011166746.1|679871_680237_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013729662.1|683992_684136_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_011166745.1|684195_685083_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	34.4	1.2e-34
WP_015545405.1|685105_685507_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011166743.1|685650_685953_+	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_011166742.1|685955_686270_+|protease	ribosomal-processing cysteine protease Prp	protease	NA	NA	NA	NA
WP_008362816.1|686271_686553_+	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_011166741.1|686716_687604_+	N-acetylneuraminate lyase	NA	NA	NA	NA	NA
WP_011166740.1|687605_689309_+	sodium:solute symporter	NA	NA	NA	NA	NA
WP_011166738.1|689757_690633_+	ROK family protein	NA	NA	NA	NA	NA
WP_011166737.1|690691_691372_+	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA	NA
WP_015545333.1|691527_692877_+	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_011166735.1|692949_693390_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061104431.1|693413_694031_+	uridine kinase	NA	A0A1V0SD85	Indivirus	32.0	1.6e-22
WP_162465397.1|694317_695919_+|transposase	IS1634 family transposase	transposase	NA	NA	NA	NA
WP_011166732.1|696059_698804_-	C1 family peptidase	NA	NA	NA	NA	NA
WP_011166731.1|698951_700160_+	DNA polymerase IV	NA	A0A290GHP0	Caldibacillus_phage	26.7	1.4e-09
WP_011166730.1|700182_701286_-	ribosome biogenesis GTPase YqeH	NA	NA	NA	NA	NA
WP_015545344.1|701294_702215_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011166728.1|702325_702907_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011166727.1|702960_703098_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011166726.1|703113_704472_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	32.1	1.4e-47
WP_011166725.1|704549_705473_-	Holliday junction branch migration DNA helicase RuvB	NA	G3MBE0	Bacillus_virus	35.2	7.9e-10
WP_011166724.1|705489_706050_-	Holliday junction DNA helicase RuvA	NA	NA	NA	NA	NA
WP_008362785.1|706157_706322_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_011166722.1|706600_707140_+	lipoprotein	NA	NA	NA	NA	NA
WP_011166721.1|707188_709015_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162465396.1|709325_710927_+|transposase	IS1634-like element IS1634 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP014346	Mycoplasma mycoides subsp. mycoides strain T1/44 chromosome, complete genome	1188848	1001440	1078522	1188848	transposase,tRNA	Erysipelothrix_phage(14.29%)	57	NA	NA
WP_011166477.1|1001440_1002628_-|tRNA	tRNA 4-thiouridine(8) synthase ThiI	tRNA	NA	NA	NA	NA
WP_061104455.1|1002635_1004423_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011166475.1|1004677_1005304_+	30S ribosomal protein S4	NA	NA	NA	NA	NA
WP_015545461.1|1005348_1005744_-	PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM	NA	NA	NA	NA	NA
WP_011166473.1|1005751_1006378_-	dihydroxyacetone kinase subunit L	NA	NA	NA	NA	NA
WP_080512642.1|1006450_1006741_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011166471.1|1006741_1007206_-	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_011166470.1|1007285_1009007_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
WP_011166469.1|1009100_1009523_-	pantetheine-phosphate adenylyltransferase	NA	NA	NA	NA	NA
WP_011166468.1|1009532_1011488_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011166467.1|1011557_1012739_-	acetate kinase	NA	NA	NA	NA	NA
WP_011166466.1|1012751_1013720_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_061104456.1|1013741_1015529_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.1	1.3e-40
WP_011166464.1|1015547_1016834_-	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA	NA
WP_013447584.1|1016862_1017852_-	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA	NA
WP_011166462.1|1017851_1018964_-	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	NA	NA	NA	NA	NA
WP_011166461.1|1019007_1020012_-	lipoate--protein ligase	NA	NA	NA	NA	NA
WP_011166460.1|1020014_1021379_-	FAD-dependent oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	22.1	5.1e-13
WP_011166459.1|1022052_1023972_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	30.0	2.6e-79
WP_011166458.1|1024238_1025675_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_015545480.1|1025746_1026727_-	6-phosphofructokinase	NA	H8ZJH0	Ostreococcus_tauri_virus	28.8	9.3e-09
WP_015545438.1|1027060_1028224_+	type 2 glycerol-3-phosphate oxidase	NA	NA	NA	NA	NA
WP_061104457.1|1028240_1029758_+	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_011166454.1|1029793_1030573_+	aquaporin family protein	NA	NA	NA	NA	NA
WP_011166453.1|1030617_1031190_-	hypoxanthine phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_011166452.1|1031195_1031627_-	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_011166451.1|1031628_1032450_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_011166450.1|1032516_1033872_-	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	58.4	1.5e-142
WP_015545360.1|1034262_1035096_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_162473319.1|1036417_1038019_-|transposase	IS1634-like element IS1634 family transposase	transposase	NA	NA	NA	NA
WP_011166445.1|1038810_1039719_+	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA	NA
WP_162492250.1|1042351_1042489_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080512646.1|1042554_1044156_-|transposase	IS1634-like element IS1634 family transposase	transposase	NA	NA	NA	NA
WP_011166439.1|1046446_1047328_+	HAD family phosphatase	NA	NA	NA	NA	NA
WP_011166438.1|1047361_1049026_-	LppA family lipoprotein	NA	NA	NA	NA	NA
WP_139552553.1|1049132_1050544_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	48.5	2.7e-65
WP_011166436.1|1050616_1052407_-	oligoendopeptidase F	NA	NA	NA	NA	NA
WP_011166435.1|1052406_1053090_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081093895.1|1054575_1054746_-	ATPase	NA	NA	NA	NA	NA
WP_015545555.1|1054844_1055876_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_011166430.1|1057465_1058878_-|transposase	IS1634 family transposase	transposase	NA	NA	NA	NA
WP_015545410.1|1059087_1059225_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_015545546.1|1059822_1060500_+	chromate transporter	NA	NA	NA	NA	NA
WP_061104458.1|1061935_1065064_-	ABC transporter permease subunit	NA	Q6GZ01	Mycoplasma_phage	29.4	1.4e-13
WP_011166425.1|1065048_1066041_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_011166424.1|1066040_1067096_-	spermidine/putrescine ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	38.2	6.2e-35
WP_011166423.1|1067460_1067826_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_011166422.1|1067844_1068036_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_011166421.1|1068061_1068607_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	29.7	5.7e-08
WP_011166420.1|1068796_1069399_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	33.0	1.6e-06
WP_039275580.1|1069472_1070030_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_011166418.1|1070032_1070926_+	guanylate kinase	NA	A0A0M5KCK5	Mollivirus	33.1	1.4e-11
WP_015545663.1|1070915_1072187_+	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA	NA
WP_011166416.1|1072179_1073205_+	DNA cytosine methyltransferase	NA	F2Y148	Organic_Lake_phycodnavirus	47.0	8.6e-82
WP_011166415.1|1073197_1073962_+	Eco47II family restriction endonuclease	NA	NA	NA	NA	NA
WP_015545564.1|1073993_1075823_-	translational GTPase TypA	NA	A0A1S5SF82	Streptococcus_phage	24.3	1.6e-22
WP_144245595.1|1077111_1078522_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	48.5	2.0e-65
