assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001563265.1_ASM156326v1	NZ_CP005083	Sphingobium sp. TKS chromosome 1, complete sequence	1	3607795-3607896	1	CRISPRCasFinder	no		DEDDh,cas3,RT,csa3,WYL,DinG	Orphan	AAGCCCCTCCCCTTCAGGGGAGGGG	25	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,RT,csa3,WYL,DinG	NA,NA	NA|219aa|up_9|NZ_CP005083.1_3598050_3598707_-	pfam04280, Tim44, Tim44-like domain	NA|166aa|up_8|NZ_CP005083.1_3598897_3599395_+	pfam02556, SecB, Preprotein translocase subunit SecB	NA|531aa|up_7|NZ_CP005083.1_3599542_3601135_+	cd13123, MATE_MurJ_like, MurJ/MviN, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|335aa|up_6|NZ_CP005083.1_3601150_3602155_+	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|217aa|up_5|NZ_CP005083.1_3602353_3603004_+	pfam13590, DUF4136, Domain of unknown function (DUF4136)	NA|202aa|up_4|NZ_CP005083.1_3603229_3603835_-	pfam00160, Pro_isomerase, Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	NA|472aa|up_3|NZ_CP005083.1_3603867_3605283_-	TIGR00362, DnaA, chromosomal replication initiator protein DnaA	NA|88aa|up_2|NZ_CP005083.1_3605726_3605990_-	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed	NA|271aa|up_1|NZ_CP005083.1_3606109_3606922_-	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA|244aa|up_0|NZ_CP005083.1_3607048_3607780_+	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA|514aa|down_0|NZ_CP005083.1_3607906_3609448_+	TIGR01982, Probable_protein_kinase_UbiB, 2-polyprenylphenol 6-hydroxylase	NA|457aa|down_1|NZ_CP005083.1_3609575_3610946_+	COG4783, COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only]	NA|257aa|down_2|NZ_CP005083.1_3610942_3611713_+	cd03023, DsbA_Com1_like, DsbA family, Com1-like subfamily; composed of proteins similar to Com1, a 27-kDa outer membrane-associated immunoreactive protein originally found in both acute and chronic disease strains of the pathogenic bacteria Coxiella burnetti	NA|45aa|down_3|NZ_CP005083.1_3611987_3612122_+	PRK00399, rpmH, 50S ribosomal protein L34; Reviewed	NA|71aa|down_4|NZ_CP005083.1_3612669_3612882_+	pfam01809, Haemolytic, Haemolytic domain	NA|568aa|down_5|NZ_CP005083.1_3612917_3614621_+	PRK01318, PRK01318, membrane protein insertase; Provisional	NA|216aa|down_6|NZ_CP005083.1_3614646_3615294_+	PRK00454, engB, GTP-binding protein YsxC; Reviewed	NA|101aa|down_7|NZ_CP005083.1_3615300_3615603_+	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism]	NA|185aa|down_8|NZ_CP005083.1_3615609_3616164_-	COG1514, LigT, 2'-5' RNA ligase [Translation, ribosomal structure and biogenesis]	NA|146aa|down_9|NZ_CP005083.1_3616289_3616727_+	COG3871, COG3871, Uncharacterized stress protein (general stress protein 26) [General function prediction only]
GCF_001563265.1_ASM156326v1	NZ_CP005087	Sphingobium sp. TKS plasmid pTK3, complete sequence	1	20291-20380	1	CRISPRCasFinder	no			Orphan	GACTCGACCCCAAAACTCACTTTT	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,RT,csa3,WYL,DinG	NA|54aa|up_7|NZ_CP005087.1_12003_12165_+,NA|114aa|up_6|NZ_CP005087.1_12190_12532_+,NA|317aa|up_4|NZ_CP005087.1_16430_17381_+,NA|94aa|up_1|NZ_CP005087.1_18924_19206_+,NA|241aa|down_6|NZ_CP005087.1_32686_33409_+,NA|85aa|down_8|NZ_CP005087.1_34611_34866_+	NA|254aa|up_9|NZ_CP005087.1_9743_10505_+	COG4544, COG4544, Uncharacterized conserved protein [Function unknown]	NA|507aa|up_8|NZ_CP005087.1_10419_11940_+	cd03468, PolY_like, DNA Polymerase Y-family	NA|54aa|up_7|NZ_CP005087.1_12003_12165_+	NA	NA|114aa|up_6|NZ_CP005087.1_12190_12532_+	NA	NA|1089aa|up_5|NZ_CP005087.1_12789_16056_+	PRK05672, dnaE2, error-prone DNA polymerase; Validated	NA|317aa|up_4|NZ_CP005087.1_16430_17381_+	NA	NA|255aa|up_3|NZ_CP005087.1_17399_18164_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|212aa|up_2|NZ_CP005087.1_18263_18899_+	PHA02518, PHA02518, ParA-like protein; Provisional	NA|94aa|up_1|NZ_CP005087.1_18924_19206_+	NA	NA|304aa|up_0|NZ_CP005087.1_19262_20174_-	pfam01051, Rep_3, Initiator Replication protein	NA|243aa|down_0|NZ_CP005087.1_22010_22739_-	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|506aa|down_1|NZ_CP005087.1_22725_24243_-	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|289aa|down_2|NZ_CP005087.1_26291_27158_+	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|75aa|down_3|NZ_CP005087.1_28804_29029_-	pfam06412, TraD, Conjugal transfer protein TraD	NA|102aa|down_4|NZ_CP005087.1_29066_29372_-	pfam06412, TraD, Conjugal transfer protein TraD	NA|1045aa|down_5|NZ_CP005087.1_29544_32679_+	PRK13889, PRK13889, conjugal transfer relaxase TraA; Provisional	NA|241aa|down_6|NZ_CP005087.1_32686_33409_+	NA	NA|255aa|down_7|NZ_CP005087.1_33818_34583_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|85aa|down_8|NZ_CP005087.1_34611_34866_+	NA	NA|297aa|down_9|NZ_CP005087.1_34951_35842_+	PRK03592, PRK03592, haloalkane dehalogenase; Provisional
GCF_001563265.1_ASM156326v1	NZ_CP005088	Sphingobium sp. TKS plasmid pTK4, complete sequence	1	56257-56346	1	CRISPRCasFinder	no			Orphan	AAAAGTGAGTTTTGGGGTCGAGTC	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,RT,csa3,WYL,DinG	NA|92aa|up_8|NZ_CP005088.1_44307_44583_+,NA|95aa|up_7|NZ_CP005088.1_44579_44864_+,NA|154aa|up_3|NZ_CP005088.1_48214_48676_+,NA|94aa|down_1|NZ_CP005088.1_57430_57712_-,NA|317aa|down_4|NZ_CP005088.1_59255_60206_-,NA|114aa|down_6|NZ_CP005088.1_64104_64446_-,NA|54aa|down_7|NZ_CP005088.1_64471_64633_-	NA|79aa|up_9|NZ_CP005088.1_44078_44315_+	pfam06412, TraD, Conjugal transfer protein TraD	NA|92aa|up_8|NZ_CP005088.1_44307_44583_+	NA	NA|95aa|up_7|NZ_CP005088.1_44579_44864_+	NA	NA|312aa|up_6|NZ_CP005088.1_44860_45796_+	smart00748, HEPN, Higher Eukarytoes and Prokaryotes Nucleotide-binding domain	NA|239aa|up_5|NZ_CP005088.1_45792_46509_+	COG2968, COG2968, Uncharacterized conserved protein [Function unknown]	NA|554aa|up_4|NZ_CP005088.1_46515_48177_+	COG3505, VirD4, Type IV secretory pathway, VirD4 components [Intracellular trafficking and secretion]	NA|154aa|up_3|NZ_CP005088.1_48214_48676_+	NA	NA|289aa|up_2|NZ_CP005088.1_49478_50345_-	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|506aa|up_1|NZ_CP005088.1_52393_53911_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|243aa|up_0|NZ_CP005088.1_53897_54626_+	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|304aa|down_0|NZ_CP005088.1_56462_57374_+	pfam01051, Rep_3, Initiator Replication protein	NA|94aa|down_1|NZ_CP005088.1_57430_57712_-	NA	NA|212aa|down_2|NZ_CP005088.1_57737_58373_-	PHA02518, PHA02518, ParA-like protein; Provisional	NA|255aa|down_3|NZ_CP005088.1_58472_59237_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|317aa|down_4|NZ_CP005088.1_59255_60206_-	NA	NA|1089aa|down_5|NZ_CP005088.1_60580_63847_-	PRK05672, dnaE2, error-prone DNA polymerase; Validated	NA|114aa|down_6|NZ_CP005088.1_64104_64446_-	NA	NA|54aa|down_7|NZ_CP005088.1_64471_64633_-	NA	NA|507aa|down_8|NZ_CP005088.1_64696_66217_-	cd03468, PolY_like, DNA Polymerase Y-family	NA|254aa|down_9|NZ_CP005088.1_66131_66893_-	COG4544, COG4544, Uncharacterized conserved protein [Function unknown]
