The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP005083	Sphingobium sp. TKS chromosome 1, complete sequence	4249857	229205	274402	4249857	integrase,transposase	Escherichia_phage(22.22%)	33	268579:268600	274945:274966
WP_001389365.1|229205_229970_-|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_066553228.1|230418_231309_+	haloalkane dehalogenase	NA	B9U1C3	Vaccinia_virus	43.0	2.9e-57
WP_001389365.1|231468_232233_-|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_041386225.1|232362_232914_-	recombinase family protein	NA	A0A1S6L009	Salmonella_phage	55.4	1.5e-43
WP_031286075.1|233052_236010_+|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	44.2	1.7e-234
WP_020819378.1|239406_239697_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020819379.1|239755_240166_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_020819380.1|240162_240444_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066553233.1|240787_242056_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_066553236.1|242518_243706_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158511719.1|243967_245173_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066553243.1|245193_246036_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_066553245.1|246032_246443_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007685994.1|247088_247781_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145907457.1|249638_250553_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020819382.1|252491_253622_-	replication initiator protein A	NA	A0A0K1Y6J9	Rhodobacter_phage	30.4	1.4e-24
WP_025160828.1|253702_254773_-	ParB/RepB/Spo0J family partition protein	NA	NA	NA	NA	NA
WP_015460581.1|254769_255966_-	AAA family ATPase	NA	A0A240F4U1	Ochrobactrum_phage	31.5	2.2e-44
WP_020819384.1|256173_256356_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021224597.1|256527_257376_+	virulence-associated protein E	NA	A0A2I6UGE7	Salinibacter_virus	27.3	7.1e-05
WP_020819387.1|257372_257816_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020819388.1|257855_258149_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_020819389.1|258145_258415_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA	NA
WP_020819391.1|258779_262229_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_037445509.1|262232_263468_-	DNA repair exonuclease	NA	NA	NA	NA	NA
WP_079640273.1|263784_264138_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020819394.1|264171_264783_+	hypothetical protein	NA	NA	NA	NA	NA
WP_051146802.1|264987_265827_-	arginase family protein	NA	NA	NA	NA	NA
WP_020819396.1|266006_268121_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_082748354.1|268202_268952_+	DUF1738 domain-containing protein	NA	A0A1V0EBY3	Caulobacter_phage	50.5	1.2e-48
268579:268600	attL	TGTTCAACGCCGATCAGATCGA	NA	NA	NA	NA
WP_066553252.1|269109_270459_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_066553254.1|270455_272243_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066553256.1|272239_274402_+|integrase	integrase	integrase	NA	NA	NA	NA
274945:274966	attR	TGTTCAACGCCGATCAGATCGA	NA	NA	NA	NA
>prophage 2
NZ_CP005083	Sphingobium sp. TKS chromosome 1, complete sequence	4249857	280594	338435	4249857	integrase,transposase	uncultured_Caudovirales_phage(33.33%)	56	280483:280542	334141:336649
280483:280542	attL	TGTGGACCGGCGTGCAAAAGGGACCCCGTTAGCGGGGTGATCGGCGTCTAAATGGGACCC	NA	NA	NA	NA
WP_061939592.1|280594_282109_+|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_061939590.1|282095_282824_+	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	37.4	3.8e-31
WP_100239852.1|283223_283670_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020819413.1|283723_284230_+	thermonuclease family protein	NA	NA	NA	NA	NA
WP_020819414.1|284265_284760_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020819415.1|284788_285823_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020819416.1|285884_286529_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048574961.1|289269_290502_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_053085586.1|290498_291866_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_048574814.1|291862_292867_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_145907140.1|293543_293801_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020819421.1|293805_293976_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025160949.1|294074_294341_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020819423.1|294533_295874_+	hypothetical protein	NA	NA	NA	NA	NA
WP_029986748.1|296048_296351_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020819425.1|296414_298559_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_020819426.1|298943_299264_+	energy transducer TonB	NA	NA	NA	NA	NA
WP_020819427.1|299342_300044_+	VIT family protein	NA	NA	NA	NA	NA
WP_025160951.1|300124_300850_+	cytochrome b561	NA	NA	NA	NA	NA
WP_020819429.1|300935_301613_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_020819430.1|301609_302626_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_020819431.1|302679_303804_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_021224265.1|303813_306885_+	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	25.5	8.1e-75
WP_020819433.1|306877_307177_+	DUF3240 family protein	NA	NA	NA	NA	NA
WP_020819434.1|307173_308421_+	TolC family protein	NA	NA	NA	NA	NA
WP_020819435.1|308428_309289_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_025160952.1|309285_310812_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_020819437.1|310808_311933_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_021223102.1|311939_313097_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_020819439.1|313093_314866_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.9	4.7e-19
WP_020819440.1|314867_315899_-	secretion protein HlyD	NA	NA	NA	NA	NA
WP_020819441.1|315895_316504_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_025160953.1|316735_317080_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_020819443.1|317090_317627_+	arsenate reductase ArsC	NA	A0A2H4J8A6	uncultured_Caudovirales_phage	42.6	3.2e-27
WP_020819444.1|317623_318070_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	70.1	5.1e-47
WP_025160954.1|318083_319157_+	ACR3 family arsenite efflux transporter	NA	NA	NA	NA	NA
WP_021223100.1|319153_319936_+	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	67.3	1.7e-77
WP_020819447.1|320348_320774_+	hypothetical protein	NA	G9BWC3	Planktothrix_phage	27.3	9.9e-08
WP_020819448.1|320973_321471_+	TIR domain-containing protein	NA	NA	NA	NA	NA
WP_021224402.1|321517_322072_+	TIR domain-containing protein	NA	NA	NA	NA	NA
WP_025160956.1|322088_322745_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020819451.1|322747_323908_-	toll/interleukin-1 receptor domain-containing protein	NA	NA	NA	NA	NA
WP_020819452.1|323913_324402_-	TIR domain-containing protein	NA	NA	NA	NA	NA
WP_025160957.1|324605_325748_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_020819454.1|325740_327558_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_025160958.1|327562_329371_+|integrase	integrase	integrase	NA	NA	NA	NA
WP_020819456.1|329354_329813_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020818778.1|330515_330869_+	DUF3768 domain-containing protein	NA	NA	NA	NA	NA
WP_066553265.1|330953_331748_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_061939590.1|331858_332587_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	37.4	3.8e-31
WP_061939592.1|332573_334088_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_145907142.1|333993_334830_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021222964.1|335046_335475_+	DoxX family protein	NA	NA	NA	NA	NA
WP_062121841.1|335540_335903_+	dioxygenase	NA	NA	NA	NA	NA
WP_020818758.1|336120_336930_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	33.3	2.5e-31
334141:336649	attR	GGGTCCCATTTAGACGCCGATCACCCCGCTAACGGGGTCCCTTTTGCACGCCGGTCCACAGGCACAAGCGAAATCGCGCCCATTTTGAACGACCTTTCCAAAGCTCACCCAGACCTGACAATCGATCTTGGCGTGAACGATCGTCTTGTCGATCTCGTGGAGGAAGGATGGGATCTCGCCATACGTATCGGACGACTACAGGACTCGCCCATGATTGCGCGCCGTCTCGCGCCTTGTCACATGGCGGTCTGCGCATCGCCGGCATATCTCAGAAAACACGGACGCCCCAAGACGGTAATCGATCTCGGCGATCATCGCTGCCTTGGCTACACCCTGTCCCACGCTGTCGGACCCAGTTCGTGGAGTTTTGGAAGCAACGGCGATATCAAGGTGCCTGTCTCGGGGCCGCTTCGCGCCGGCAACGGCGACGCACTTGTCGCAGCGGCCATTGCCGGTATGGGGATCGTCTACCAGCCCACATTCATCGTTGCCGATGCCGTTGCAGATGGTCGGCTCGAAATTCTCGAACTCGACCATCCTCCGTTCGATCTCGGCAACATCTACGCAGTGTACCCTCCGAACGAGCATCTCCCCGCGAAGGTGCGCGTCTTCATTGATTTCCTTATCAAGCGTTTTGCTGGCACCCCACCGTGGCAGCGACGCATCGATCAGACAACCGACAGGAACTGATCGCTCGCTTCGGTTCACACTGGCGGTGTGATAACGCCGCACATTTTTGCAGATTATCGCGAGGTGGGAAGCAGATTACCTGTCACGGCATCGGCGGAGACGGCTCCGCCCGCCGCTAAGAGCTAGCCGAGCAAATCCAGTTCGGAACTCCACGGCGACAGACATCGCAACCGACGGCAATGCCTTTGTCATCGGTCGCGTCGATGGAGCGATGCTATGAAAGTCCACACCGGAATGATCGGTGCCACGGTGCTGCGTGCCGCCCTTGGCGGCCTCTTCCTCGCACATGCAGGCATGAAGATCTTCGTGTTCACGCCGGCCGGAACGGCGCAATTCTTCGAGTCGGTCGGCGTACCAGGGTTCATCGCTTATCTGGTGATGACAGCGGAAACGCTTGGCGGAATTGCACTGCTCCTCGGCATCTATCCGCGCATCGTGGCGCTGGGCCTTATCCCAATCCTGCTCGGCGCGATTGCAACGGTGCATGCCGGCGCCGGCTTCTTCTTCAACAATCCCAATGGGGGTTGGGAATTTCCTGCCTTCTGGGCGCTCACCCTCATAGTCCAGGCTCTGATCGGCGATGGGCTCTACGCATTGAAGCCGACACCGCTTCCTGGGACCGTTATCAACCCTGCGATCACCTGAAGCTGCTCTCCGCCCGCAGCCCGTAATGCCATCCCCGTATAAACTCTCTTCTGGCGGTTCAATCGATGCTCCCAAGCATATTCATTAGCCACGGTGCTCCAAGCCTTGCGCTTGGCGACAGTCCGGCGCGGTCGTTCCTCGAATCTCTGCCCGCGCTTCTCCCCTTTCGACCGACCGCGATCCTGATCATATCGGCGCACTGGGAAGAGAGTGTTGTGACCCTCAACGGCCTCGACCGACACACTACAATTCATGATTTCGGTGGCTTTCCTGACGCACTTTACGAGATGCGTTACCCGGCTCCGGGATCTGCCCATCTGGTCGAGCGCGTACGCTCCCTTCTGCACGAACAAAGCATACCGAGTGCGGCAAACGAGTTTCGCGGCTGTAGCGCGACGATTACGGAGTCCGGTCGGCGTCAATTTTGATGGCCGATAGGTGGCCGCGCCGGTTGGTGAATTCTGGCTACCATTTGCTGTTGCGAGGAGCAACCGTCGAGCGACAATTACGACGCTGGGTAATTGTCGCTGGCGCTGGCCGGAAGCGAGGGTTTGAAGCGCATGGGATGGTTGGCATGTAATTGCCGCTGGCGACAATTACCCGTTGCCTCAGCAAGGGTGCTCCCGAGCGCGAAGCCAGCGACAATTATGATGGCCGGTCCGGGGCGCCATTGGGCGGGTCGTAATCGCCGGCGTTGATGCGGGCGACGGCGGAACGCTTGCGGTAGCTTTCGCCGTTCATCTCGATGATGGTCGAGTGGTGCACGAGGCGGTCGATCGCGGCGACAGCCATGGCGGGATCAGGGAAGACGTTGTCCCATGCCGAAAATGGCTGGTTGGCGGTAATGGCGAGCGAGTGGCGTTCGTAGCGGTGGGCGATGAGCTCGAACAAGGCGCTGGTTTCGACCTGGTCCTTGCGGACGTAGGACAGATCGTCGAGCACGATGAGATCGAACTTGTCGAGCTTGTCGAGCATGGCGGGCAAGCTGAGGTCGCGGCGCGCGGACTGGAGCTTCTGGACCATGTCGGTGGTGGAGCAGAACAGGACGCGCCGCCCCGTGTCGATGAGGGCATGGCCAATGGCGGCAACTGCGTGCGTCTTGCCGGTCCCGCTCTGGCCGAACAGCAGCAGGTTGCCGCCGTTCTCGATCCAGTCGTCACCGGCGGCGAGGGAC	NA	NA	NA	NA
WP_020818759.1|336929_338435_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP005083	Sphingobium sp. TKS chromosome 1, complete sequence	4249857	399708	480321	4249857	transposase,integrase	Escherichia_phage(26.67%)	76	398625:398639	477954:477972
398625:398639	attL	CCCGGCACTTCGGCC	NA	NA	NA	NA
WP_020818522.1|399708_400623_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
398625:398639	attL	CCCGGCACTTCGGCC	NA	NA	NA	NA
WP_021224259.1|400633_401083_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020818524.1|401323_401536_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048574958.1|401703_403935_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_020818526.1|404560_405088_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_025160754.1|405150_405480_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020818528.1|405521_405995_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158500939.1|406117_406957_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020818598.1|407457_407910_+	hypothetical protein	NA	A0A1P8VVG0	Erythrobacter_phage	50.4	3.9e-26
WP_020818599.1|407906_408335_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031293519.1|408561_409935_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013849886.1|409935_410505_-	recombinase family protein	NA	I1ZBD6	Salisaeta_icosahedral_phage	44.9	1.2e-32
WP_062734670.1|410645_413615_+|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	39.7	5.6e-198
WP_020820181.1|416076_417246_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_013521170.1|417374_418079_-	thiol:disulfide oxidoreductase	NA	NA	NA	NA	NA
WP_013521171.1|418075_418690_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_013521172.1|418753_419548_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_013521173.1|419549_420266_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_013521174.1|420262_421252_-	DMT family transporter	NA	NA	NA	NA	NA
WP_066553272.1|422645_423533_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_008328818.1|424099_425647_-|transposase	IS91-like element ISPps1 family transposase	transposase	NA	NA	NA	NA
WP_066553278.1|426979_427270_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_066553280.1|427381_428047_-	DoxX family protein	NA	NA	NA	NA	NA
WP_008328818.1|428301_429849_-|transposase	IS91-like element ISPps1 family transposase	transposase	NA	NA	NA	NA
WP_066553284.1|430272_430899_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_066553286.1|430917_431523_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_066553288.1|431562_431922_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066553291.1|432087_433635_-|transposase	IS91-like element ISPps1 family transposase	transposase	NA	NA	NA	NA
WP_021225953.1|435231_435474_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020820182.1|435470_436136_-	3-oxoacid CoA-transferase subunit B	NA	NA	NA	NA	NA
WP_020820183.1|436140_436839_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_020820184.1|436838_437540_-	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_157838174.1|437536_438676_-	TfdD	NA	NA	NA	NA	NA
WP_020820186.1|438687_439761_-	maleylacetate reductase	NA	NA	NA	NA	NA
WP_020820187.1|439772_440108_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082748360.1|440040_440664_-	winged helix DNA-binding protein	NA	NA	NA	NA	NA
WP_020820189.1|440805_441438_+	glutathione S-transferase	NA	NA	NA	NA	NA
WP_020820190.1|441434_442049_+	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_020820191.1|442090_443059_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_020820192.1|443065_443704_+	glutathione S-transferase	NA	NA	NA	NA	NA
WP_062121849.1|443700_444858_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_066553298.1|444862_445984_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066046204.1|445980_446622_-	recombinase family protein	NA	A0A0C4UR34	Shigella_phage	47.2	9.3e-34
WP_061939592.1|452130_453645_+|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
453233:453247	attR	CCCGGCACTTCGGCC	NA	NA	NA	NA
WP_061939590.1|453631_454360_+	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	37.4	3.8e-31
453233:453247	attR	CCCGGCACTTCGGCC	NA	NA	NA	NA
WP_066553301.1|454470_455292_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_030092864.1|455438_455819_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_008831331.1|455943_456339_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008831330.1|456335_457304_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_008831329.1|457300_457921_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_008831328.1|457927_458380_-	DUF2442 domain-containing protein	NA	NA	NA	NA	NA
WP_008831327.1|458376_458595_-	DUF4160 domain-containing protein	NA	NA	NA	NA	NA
WP_008831326.1|458741_458969_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008831325.1|458940_459147_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015449421.1|459159_459321_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_007685989.1|459372_459792_-	XRE family transcriptional regulator	NA	A0A2D1GR59	Pseudomonas_phage	48.0	4.5e-13
WP_007685988.1|459827_460148_-	type II toxin-antitoxin system YafQ family toxin	NA	NA	NA	NA	NA
WP_007685985.1|460116_460398_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA	NA
WP_066553303.1|460859_461453_+	transcription elongation protein SprT	NA	A0A193GYF0	Enterobacter_phage	41.4	1.6e-35
WP_007686145.1|461579_462233_+	AAA family ATPase	NA	D4HTX7	Vibrio_phage	29.0	1.1e-18
WP_007686146.1|462229_462544_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145907148.1|462607_463606_-	replication initiator protein A	NA	A0A0K1LLD0	Rhodobacter_phage	40.1	3.6e-56
WP_001389365.1|464095_464860_+|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_007687863.1|465353_465557_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001389365.1|467495_468260_+|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_007682395.1|468536_468899_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007682394.1|468898_469585_-	EthD domain-containing protein	NA	NA	NA	NA	NA
WP_015460611.1|469606_470359_-	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	26.3	1.7e-10
WP_001389365.1|471729_472494_-|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_066561249.1|473255_474269_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_081440685.1|474374_475043_+	EthD domain-containing protein	NA	NA	NA	NA	NA
WP_145907151.1|474987_475281_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007682041.1|475463_476138_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_007015766.1|476306_477665_-	hypothetical protein	NA	NA	NA	NA	NA
WP_026109404.1|477661_478267_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	46.6	2.7e-35
WP_001389365.1|479556_480321_-|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
>prophage 4
NZ_CP005083	Sphingobium sp. TKS chromosome 1, complete sequence	4249857	705641	718331	4249857		Aureococcus_anophage(16.67%)	8	NA	NA
WP_066553899.1|705641_709955_-	methylase	NA	A0A076FMQ0	Aureococcus_anophage	25.7	1.7e-14
WP_066553901.1|710144_710420_+	HU family DNA-binding protein	NA	B5TA87	Burkholderia_phage	46.7	3.9e-13
WP_066561338.1|710462_711107_-	antitoxin of toxin-antitoxin stability system	NA	K4JU95	Caulobacter_phage	33.2	4.5e-20
WP_066553904.1|711099_711516_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066553909.1|711605_711824_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066553912.1|711883_714025_-	ParB N-terminal domain-containing protein	NA	G8DH78	Emiliania_huxleyi_virus	28.0	1.6e-29
WP_066553916.1|714157_715351_-	hypothetical protein	NA	A0A1V0DX75	Synechococcus_virus	44.9	1.4e-78
WP_066553919.1|715577_718331_+	class I SAM-dependent DNA methyltransferase	NA	Q6NE04	Leptospira_phage	34.4	3.3e-120
>prophage 5
NZ_CP005083	Sphingobium sp. TKS chromosome 1, complete sequence	4249857	780171	838662	4249857	transposase,integrase	uncultured_Mediterranean_phage(21.43%)	50	786181:786198	845248:845264
WP_066554049.1|780171_781458_+|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	Q8W6M6	Sinorhizobium_phage	45.8	1.3e-98
WP_066554051.1|781513_782170_-	lytic transglycosylase domain-containing protein	NA	A0A0H3V0Q1	Geobacillus_virus	51.8	4.9e-22
WP_006954973.1|782466_783681_+|transposase	IS256-like element ISSpma2 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	47.9	3.2e-99
WP_066554061.1|783774_784623_+	virulence protein	NA	A0A0H5AWB1	Pseudomonas_phage	30.6	2.5e-10
WP_066554064.1|784698_786915_+	methylase	NA	A0A1Y0T2N3	Pseudomonas_phage	27.6	1.7e-10
786181:786198	attL	GTGCGCGGCGAGCGCCGC	NA	NA	NA	NA
WP_009823939.1|786959_787964_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
786181:786198	attL	GTGCGCGGCGAGCGCCGC	NA	NA	NA	NA
WP_009823940.1|787960_789316_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_015449381.1|789312_790545_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1P8DJ76	Virus_Rctr85	26.8	3.5e-05
WP_066554069.1|791147_792695_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_082748754.1|793090_793567_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_066554070.1|794610_795447_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_066554072.1|795532_796369_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_066554074.1|796911_798747_+	methylase	NA	A0A076FMQ0	Aureococcus_anophage	30.7	8.1e-14
797521:797538	attR	GTGCGCGGCGAGCGCCGC	NA	NA	NA	NA
WP_066554077.1|798809_799223_+	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
797521:797538	attR	GTGCGCGGCGAGCGCCGC	NA	NA	NA	NA
WP_066554081.1|799219_799954_+	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_066554084.1|800025_800532_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066554087.1|800915_802085_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066554096.1|802081_802594_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066554099.1|802593_804567_+	DUF3732 domain-containing protein	NA	NA	NA	NA	NA
WP_145907178.1|804792_805530_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066554101.1|805520_806876_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066554108.1|807138_809127_+	ParB/RepB/Spo0J family partition protein	NA	NA	NA	NA	NA
WP_066554111.1|810003_810996_-|integrase	site-specific integrase	integrase	A0A142F1N9	Bacillus_phage	26.9	6.3e-21
WP_066554113.1|810992_811934_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_066554115.1|811930_813148_-|integrase	tyrosine-type recombinase/integrase	integrase	W8EHC2	Mycobacterium_phage	29.0	5.0e-12
WP_066554117.1|813247_813895_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066554124.1|813899_814334_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066554126.1|814768_816160_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_066554128.1|816156_817944_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066554134.1|817940_820166_+|integrase	integrase	integrase	NA	NA	NA	NA
WP_066554136.1|820210_821113_+	DUF1738 domain-containing protein	NA	A0A1B1IWW8	uncultured_Mediterranean_phage	35.9	5.9e-34
WP_082748411.1|821109_821406_+	antirestriction protein ArdC	NA	A0A1B1IWW8	uncultured_Mediterranean_phage	44.6	1.1e-05
WP_066554144.1|821417_821840_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066554145.1|822144_823098_+	DUF2493 domain-containing protein	NA	NA	NA	NA	NA
WP_066554146.1|823220_823682_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066554149.1|823692_824121_+	hypothetical protein	NA	A0A1B1IUL8	uncultured_Mediterranean_phage	62.1	2.8e-34
WP_007688363.1|824423_824813_+	single-stranded DNA-binding protein	NA	A0A1P8L6D9	Staphylococcus_phage	35.5	8.5e-14
WP_066554152.1|824928_825297_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066554157.1|825482_825719_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066554159.1|825821_826016_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066554166.1|826455_826788_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066554168.1|826777_829174_+	type IV secretion system DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_066554174.1|829211_832139_+	conjugative relaxase	NA	NA	NA	NA	NA
WP_030092562.1|832209_832449_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066554176.1|832473_832671_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066561351.1|832670_832976_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007688341.1|833410_834052_-	helix-turn-helix transcriptional regulator	NA	A5X9F5	Aeromonas_virus	39.4	1.3e-19
WP_066554183.1|834460_835357_+	WYL domain-containing protein	NA	NA	NA	NA	NA
WP_066554185.1|835349_835808_+	BREX-3 system P-loop-containing protein BrxF	NA	NA	NA	NA	NA
WP_066554198.1|837147_838662_+|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
845248:845264	attR	GATCGTCGATCCCGTCG	NA	NA	NA	NA
>prophage 6
NZ_CP005083	Sphingobium sp. TKS chromosome 1, complete sequence	4249857	875588	933364	4249857	protease,integrase,transposase	Corynebacterium_phage(22.22%)	43	918946:918962	939833:939849
WP_066554198.1|875588_877103_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_006954973.1|877158_878373_-|transposase	IS256-like element ISSpma2 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	47.9	3.2e-99
WP_066554269.1|879098_879680_-	radical SAM protein	NA	NA	NA	NA	NA
WP_082748417.1|879676_881518_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A2L0V0F4	Agrobacterium_phage	39.9	4.1e-42
WP_066554273.1|881514_882708_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158511724.1|882704_884474_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145907184.1|884581_889462_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_066554281.1|889614_890046_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066554284.1|890346_890775_+	DUF3293 domain-containing protein	NA	NA	NA	NA	NA
WP_066554286.1|890881_892084_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	50.4	1.2e-95
WP_145907468.1|892467_893319_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	53.8	1.0e-43
WP_006954973.1|893668_894883_+|transposase	IS256-like element ISSpma2 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	47.9	3.2e-99
WP_066554292.1|895843_898681_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_066554293.1|898925_900350_-	family 43 glycosylhydrolase	NA	NA	NA	NA	NA
WP_082748423.1|900443_901457_-	arabinan endo-1,5-alpha-L-arabinosidase	NA	NA	NA	NA	NA
WP_066554295.1|901616_903179_-	alpha-N-arabinofuranosidase	NA	NA	NA	NA	NA
WP_066554297.1|903196_904123_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_066554298.1|904127_905120_-	FAH family protein	NA	NA	NA	NA	NA
WP_066561357.1|905453_906134_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_066554299.1|906231_907536_-	sugar MFS transporter	NA	NA	NA	NA	NA
WP_145907186.1|907711_908809_+	galactose-1-epimerase	NA	NA	NA	NA	NA
WP_066554304.1|908819_909677_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA	NA
WP_066554307.1|909740_910046_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066554310.1|910110_911100_-	LacI family transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	33.7	4.5e-35
WP_066554315.1|911803_912745_+|transposase	IS110 family transposase	transposase	Q75QL1	Wolbachia_phage	35.9	1.3e-28
WP_066561358.1|912759_914052_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_066554316.1|914196_914895_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.1	1.6e-26
WP_066554317.1|914891_915293_-	PDZ domain-containing protein	NA	NA	NA	NA	NA
WP_066554319.1|915366_915651_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066554325.1|915748_919078_-	glycosyltransferase	NA	NA	NA	NA	NA
918946:918962	attL	CCGACGGCACGGCGACC	NA	NA	NA	NA
WP_066554327.1|919299_919479_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066554329.1|919582_920176_+	nitroreductase family protein	NA	NA	NA	NA	NA
WP_066554337.1|920301_921036_-	anti-sigma factor	NA	NA	NA	NA	NA
WP_066561363.1|921028_921550_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_082748425.1|921560_922802_-	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
WP_066561367.1|923174_923909_+	type IV secretion system protein VirJ	NA	NA	NA	NA	NA
WP_066554341.1|923952_924384_+	DUF2147 domain-containing protein	NA	NA	NA	NA	NA
WP_145907471.1|924545_925802_+	virulence factor family protein	NA	NA	NA	NA	NA
WP_140404649.1|928568_929177_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007688625.1|929282_929627_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_066554347.1|929747_930950_+	cardiolipin synthase B	NA	NA	NA	NA	NA
WP_066554352.1|931262_932165_+|integrase	tyrosine-type recombinase/integrase	integrase	S5W9T9	Leptospira_phage	29.1	2.2e-25
WP_066554355.1|932170_933364_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
939833:939849	attR	GGTCGCCGTGCCGTCGG	NA	NA	NA	NA
>prophage 7
NZ_CP005083	Sphingobium sp. TKS chromosome 1, complete sequence	4249857	1462826	1479921	4249857	portal,capsid,head,protease,tail,tRNA	Staphylococcus_phage(14.29%)	26	NA	NA
WP_066555576.1|1462826_1463558_-|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
WP_087575270.1|1463735_1463915_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066561479.1|1464052_1464553_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066555579.1|1464571_1465780_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	47.8	8.0e-95
WP_066555581.1|1465838_1467443_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_066555583.1|1467454_1468090_-	DedA family protein	NA	NA	NA	NA	NA
WP_066555588.1|1468117_1468624_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_066555590.1|1468713_1468956_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066555592.1|1469075_1469786_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066561480.1|1469866_1470514_+	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_066561481.1|1470661_1471234_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066555598.1|1471359_1471806_-	acetyltransferase	NA	NA	NA	NA	NA
WP_066555600.1|1471869_1473186_+	DNA-packaging protein	NA	A0A1V0DY66	Dinoroseobacter_phage	41.2	6.7e-71
WP_066561483.1|1473273_1473612_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066555602.1|1473715_1474846_+|portal	phage portal protein	portal	W8ECU7	Geobacillus_phage	34.7	3.7e-49
WP_066555604.1|1474869_1475190_+	hypothetical protein	NA	K4I011	Acidithiobacillus_phage	43.7	2.7e-10
WP_066555606.1|1475182_1475602_+|head,protease	HK97 family phage prohead protease	head,protease	A0A0U2BX10	Paracoccus_phage	41.9	9.8e-16
WP_066555608.1|1475698_1476811_+|capsid	phage major capsid protein	capsid	A0A2D1GNH4	Pseudomonas_phage	43.9	9.7e-79
WP_066555609.1|1476935_1477421_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082748471.1|1477387_1477609_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066555614.1|1477605_1478001_+	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_066555616.1|1478004_1478328_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066555617.1|1478386_1478794_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_066555621.1|1478790_1479102_+	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_066555623.1|1479098_1479335_+|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
WP_066555624.1|1479378_1479921_+|tail	tail tape measure protein	tail	D6PEW0	uncultured_phage	35.5	1.8e-09
>prophage 8
NZ_CP005083	Sphingobium sp. TKS chromosome 1, complete sequence	4249857	3373024	3378701	4249857		uncultured_Mediterranean_phage(66.67%)	8	NA	NA
WP_066561911.1|3373024_3374020_-	cysteine synthase A	NA	A0A1X9I5K7	Streptococcus_phage	41.0	9.0e-52
WP_066559406.1|3374248_3375166_+	cell wall hydrolase	NA	A0A1B0UXM4	Roseobacter_phage	42.1	1.4e-19
WP_025546951.1|3375555_3375684_+	entericidin A/B family lipoprotein	NA	NA	NA	NA	NA
WP_066559409.1|3375721_3376498_-	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	41.4	1.4e-44
WP_066559412.1|3376494_3376929_-	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_066559414.1|3376958_3377210_-	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	72.2	9.3e-06
WP_066559416.1|3377328_3377922_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	44.1	4.7e-40
WP_066559418.1|3377918_3378701_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	33.6	6.2e-32
>prophage 9
NZ_CP005083	Sphingobium sp. TKS chromosome 1, complete sequence	4249857	3480891	3511062	4249857	integrase,transposase	Ralstonia_phage(50.0%)	39	3494406:3494437	3498200:3498231
WP_013039223.1|3480891_3482262_-|transposase	IS1380-like element ISSp1 family transposase	transposase	NA	NA	NA	NA
WP_066559647.1|3482319_3482712_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082748664.1|3483010_3484963_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_066559656.1|3485273_3485747_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082748666.1|3485749_3486040_+	excalibur calcium-binding domain-containing protein	NA	NA	NA	NA	NA
WP_066559659.1|3486039_3486240_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066559666.1|3486236_3486425_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082748668.1|3486428_3486914_-	thermonuclease family protein	NA	NA	NA	NA	NA
WP_066559675.1|3486949_3487549_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082748930.1|3487558_3487810_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066559686.1|3488252_3488444_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145907382.1|3488658_3488949_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066561932.1|3489037_3490198_-|integrase	site-specific integrase	integrase	A0A221SAN4	Ralstonia_phage	30.3	3.4e-34
WP_066559692.1|3490493_3491759_-	hypothetical protein	NA	A0A088FVF8	Escherichia_phage	43.4	1.8e-84
WP_145907385.1|3491764_3492109_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145907388.1|3492228_3492561_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066559698.1|3492951_3493188_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145907392.1|3493178_3493394_-	hypothetical protein	NA	NA	NA	NA	NA
3494406:3494437	attL	ACTAATCATCAGGTTCTCAAAATGCGAAGGAA	NA	NA	NA	NA
WP_048574961.1|3494546_3495779_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_053085586.1|3495775_3497143_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_048574814.1|3497139_3498144_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_066559708.1|3498598_3498829_+	hypothetical protein	NA	NA	NA	NA	NA
3498200:3498231	attR	TTCCTTCGCATTTTGAGAACCTGATGATTAGT	NA	NA	NA	NA
WP_066559711.1|3498923_3499322_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066559714.1|3499394_3499586_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082748670.1|3499627_3500245_-	DUF805 domain-containing protein	NA	NA	NA	NA	NA
WP_158511754.1|3500740_3502483_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066559719.1|3502597_3503242_+	UPF0149 family protein	NA	NA	NA	NA	NA
WP_145907398.1|3503670_3504069_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145907401.1|3504074_3505232_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145907404.1|3505344_3505683_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145907407.1|3505943_3506390_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145907410.1|3506389_3506683_+	excalibur calcium-binding domain-containing protein	NA	NA	NA	NA	NA
WP_066559723.1|3506682_3506883_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066559737.1|3507128_3507728_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082748934.1|3507736_3507988_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082748674.1|3508103_3508427_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066559741.1|3508430_3508622_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066559743.1|3509452_3509773_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066561936.1|3510030_3511062_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 1
NZ_CP005084	Sphingobium sp. TKS chromosome 2, complete sequence	989120	443715	504583	989120	transposase,integrase	Staphylococcus_phage(22.22%)	48	436507:436523	484182:484198
436507:436523	attL	CGTGCCGCCCGCGCCCG	NA	NA	NA	NA
WP_066563851.1|443715_444747_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	27.4	2.0e-06
WP_046764605.1|445160_446066_+|integrase	tyrosine-type recombinase/integrase	integrase	S5W9T9	Leptospira_phage	28.6	1.7e-20
WP_066562693.1|446070_447264_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_082749187.1|447772_450061_-	arylsulfatase	NA	NA	NA	NA	NA
WP_082749019.1|450138_452367_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_066562697.1|452457_454839_-	arylsulfatase	NA	NA	NA	NA	NA
WP_158511771.1|455195_455828_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_066563853.1|456157_458416_+	membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family	NA	NA	NA	NA	NA
WP_066562700.1|458461_459646_-	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_066562702.1|459657_460437_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_066563854.1|460461_461124_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_066562704.1|461468_462608_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_066562706.1|462707_463301_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_066562711.1|463355_464291_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA	NA
WP_066562713.1|464311_465157_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_066562715.1|465204_466311_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_066562718.1|466636_468289_+	acyl--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	25.8	2.3e-31
WP_066562720.1|468316_469432_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	35.0	5.0e-51
WP_066562721.1|469480_469969_-	flavin reductase family protein	NA	NA	NA	NA	NA
WP_066562724.1|469976_471233_-	cytochrome P450	NA	NA	NA	NA	NA
WP_066562727.1|471247_472330_-	alcohol dehydrogenase catalytic domain-containing protein	NA	NA	NA	NA	NA
WP_066562729.1|472663_473410_+	glucose 1-dehydrogenase	NA	Q06VL0	Trichoplusia_ni_ascovirus	35.2	2.2e-18
WP_082749025.1|473348_474197_+	crotonase	NA	NA	NA	NA	NA
WP_066563857.1|474696_477075_+	TonB-dependent receptor plug domain-containing protein	NA	NA	NA	NA	NA
WP_066562735.1|477394_478594_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	46.7	1.0e-94
WP_066563859.1|478832_479864_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_066562739.1|480621_480939_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066563862.1|481326_482505_-	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_066562741.1|482519_484595_-	hypothetical protein	NA	NA	NA	NA	NA
484182:484198	attR	CGTGCCGCCCGCGCCCG	NA	NA	NA	NA
WP_066562743.1|484609_486343_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_066562745.1|486449_487520_-	phosphotransferase	NA	NA	NA	NA	NA
WP_066562748.1|487516_488686_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_066562749.1|488710_489463_-	SDR family oxidoreductase	NA	A0A0N9R355	Chrysochromulina_ericina_virus	25.0	1.3e-10
WP_066562751.1|489553_490219_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_066562752.1|490332_491043_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_066563871.1|491093_491675_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_082749029.1|491841_492387_+	RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_082749031.1|492495_494199_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_066562754.1|494336_495383_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_066562756.1|495379_496168_-	formate dehydrogenase accessory sulfurtransferase FdhD	NA	NA	NA	NA	NA
WP_066562758.1|496164_496401_-	formate dehydrogenase subunit delta	NA	NA	NA	NA	NA
WP_066562760.1|496411_499258_-	formate dehydrogenase subunit alpha	NA	A0A077SK27	Escherichia_phage	24.1	1.9e-22
WP_066562761.1|499254_500844_-	formate dehydrogenase	NA	NA	NA	NA	NA
WP_066562763.1|500840_501320_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA	NA
WP_066562765.1|501306_501552_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066562769.1|501853_502513_+	sigma-70 family RNA polymerase sigma factor	NA	A0A076YQ50	Rhizobium_phage	29.5	5.1e-11
WP_066562770.1|502697_503042_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066562771.1|503557_504583_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP005084	Sphingobium sp. TKS chromosome 2, complete sequence	989120	830588	849495	989120	transposase,integrase	Bacillus_phage(40.0%)	16	846410:846440	851503:851533
WP_066563343.1|830588_831497_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1P8DJJ6	Virus_Rctr41k	28.8	4.9e-28
WP_066563346.1|831501_832698_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_145907689.1|833368_834079_+	DNA-binding response regulator	NA	NA	NA	NA	NA
WP_066563351.1|834071_834659_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066563354.1|834662_838067_+	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	27.6	5.1e-38
WP_066563357.1|838154_838898_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066563361.1|838897_839281_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066563365.1|839277_840624_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145907692.1|840620_841145_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145907695.1|841322_843008_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145907697.1|843318_844413_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066563377.1|844652_844982_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_030541462.1|844978_845326_+	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	50.9	8.3e-29
846410:846440	attL	CATTATCCAGAGCATGGTTTTATCTGGGGCG	NA	NA	NA	NA
WP_066563385.1|846497_847514_-|integrase	site-specific integrase	integrase	A0A0K2CP59	Brevibacillus_phage	25.2	1.0e-18
WP_066563387.1|847510_848482_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_082749163.1|848478_849495_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A142F1N9	Bacillus_phage	24.3	1.9e-09
851503:851533	attR	CGCCCCAGATAAAACCATGCTCTGGATAATG	NA	NA	NA	NA
>prophage 1
NZ_CP005085	Sphingobium sp. TKS plasmid pTK1, complete sequence	520614	4927	56732	520614	integrase,transposase	Escherichia_phage(20.0%)	49	10650:10709	41580:42461
WP_021224283.1|4927_7837_-|transposase	Tn3 family transposase	transposase	NA	NA	NA	NA
WP_013041559.1|8196_8880_-	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_007686501.1|8879_9278_-	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_007686500.1|9374_10541_-	hypothetical protein	NA	NA	NA	NA	NA
10650:10709	attL	AGGCTCTGTTGCAAAGATTGGCGGCAGTCAGAGGTAGGCTGTCGCTCTGCGCCGATCAGG	NA	NA	NA	NA
WP_001389365.1|10704_11469_-|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_014072606.1|12090_12477_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_014072607.1|12511_13261_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_014072608.1|13280_14060_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_014072609.1|14063_14501_-	membrane protein	NA	NA	NA	NA	NA
WP_041393786.1|14505_14931_-	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_014072611.1|14933_15275_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_014072612.1|15501_16971_+	multicopper oxidase domain-containing protein	NA	NA	NA	NA	NA
WP_014072613.1|17079_17586_+	DsrE family protein	NA	NA	NA	NA	NA
WP_041393782.1|17620_18388_-	membrane protein	NA	NA	NA	NA	NA
WP_009824028.1|18665_19544_-	AAA family ATPase	NA	B5TA81	Burkholderia_phage	25.4	1.0e-06
WP_004212864.1|19470_20871_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	A0A2H4JEQ4	uncultured_Caudovirales_phage	29.4	9.9e-12
WP_009824027.1|21062_21635_+	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	48.1	9.5e-38
WP_013039112.1|21924_23127_+	PDZ domain-containing protein	NA	NA	NA	NA	NA
WP_007406847.1|23120_23540_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_004212870.1|23615_24242_+	cation transporter	NA	NA	NA	NA	NA
WP_004212871.1|24241_26209_+	c-type cytochrome	NA	NA	NA	NA	NA
WP_007406840.1|26282_26579_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013039111.1|26639_27917_+	TolC family protein	NA	NA	NA	NA	NA
WP_004212877.1|27916_29095_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_004212878.1|29098_32344_+	CusA/CzcA family heavy metal efflux RND transporter	NA	NA	NA	NA	NA
WP_013849881.1|32397_32886_+	SRPBCC domain-containing protein	NA	NA	NA	NA	NA
WP_009824022.1|32882_33260_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004212881.1|33307_33721_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004212882.1|33724_34411_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004212885.1|34407_35016_+	cation transporter	NA	NA	NA	NA	NA
WP_004212886.1|35012_37514_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	41.0	7.7e-124
WP_004212890.1|37510_38260_+	HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_013849879.1|38456_41348_-|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	38.8	8.4e-191
WP_001389365.1|41634_42399_-|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_082749201.1|43159_43609_-	MucR family transcriptional regulator	NA	A0A1P8VVG0	Erythrobacter_phage	45.0	2.0e-19
41580:42461	attR	AGGCTCTGTTGCAAAGATTGGCGGCAGTCAGAGGTAGGCTGTCGCTCTGCGCCGATCAGGCGGCTGCTGCGAAATGGTGGTTGAGCATGCCCATGGCCTCCGTCAGCGCCGAGGGCCCAATGCCAAAAGCTCTCTCCACAAGGCGCACCTCGCCCCTGATGCCGGGCTGCAGGCACCAGGGGCGAGCCTGTCCTTTGCGCAGGGCTCGCATGACTTCGAATCCCTTGATCGTGGCATAGGCCGTGGGGATCGATTTGAAACCGCGCACCGGCTTGATCAGTATCTTGAGCTTTCCGTGATCGGCCTCGATCACGTTATTGAGATACTTCACCTGCCGGTGGGCCGTCTCCCGGTCCAGCTTTCCTTCGCGCTTCAATTCGGTGATCGCTGCACCATAGCTCGGCGCTTTGTCGGTATTGAGCGTGGCAGGCTTTTCCCAGTGCTTCAGGCCTCGCAGGGCCTTGCCCAGGAACCGCTTCGCTGCCTTGGCGCTGCGGGTCGGCGACAGGTAGAAATCGATCGTGTCGCCCCGCTTGTCGACTGCCCGGTACAGGTAGGTCCACTTGCCCCGCACCTTGACGTAGGTTTCATCCAGGCGCCAGCTCGGATCAAAGCCACGCCGCCAGAACCAGCGCAGCCGCTTCTCCATCTCCGGGGCGTAGCACTGGACCCAGCGATAGATCGTCGTATGGTCGACCGAAATGCCGCGTTCCGCCAGCATTTCCTCAAGGTCGCGATAGCTGATCGGATAGCGACAATACCAGCGCACCGCCCACAGGATCACATCACCCTGGAAATGGCGCCACTTGAAATCCGTCATCGTTCCGTCCGTCCAATCTCCGCCAAGCATGCTCAAGCTTCACGATTTTTGCAACAGAGCCG	NA	NA	NA	NA
WP_145907753.1|44549_45827_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_081659699.1|45844_47617_+	response regulator	NA	A0A1V0SGX0	Hokovirus	23.6	1.3e-05
WP_158511787.1|47613_47994_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021244690.1|48399_48828_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_021244689.1|48897_50334_+	MFS transporter	NA	NA	NA	NA	NA
WP_021244688.1|50365_50821_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_031290939.1|51023_51911_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_158511788.1|51981_52146_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145907756.1|52142_52613_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021244684.1|52930_53203_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_021244683.1|53189_53579_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_021244682.1|53768_54107_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021244680.1|54852_55158_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_145907759.1|55369_56732_+|transposase	IS3 family transposase	transposase	Q6J1X2	Lactobacillus_phage	28.5	1.7e-08
>prophage 2
NZ_CP005085	Sphingobium sp. TKS plasmid pTK1, complete sequence	520614	162577	207503	520614	integrase	Caulobacter_phage(20.0%)	41	203834:203872	207595:207633
WP_066564154.1|162577_163579_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_066564156.1|163700_164096_-	cupin domain-containing protein	NA	Q2I8C5	Bacillus_phage	45.5	2.0e-23
WP_066564159.1|164405_165098_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145907781.1|165097_166084_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066564328.1|166551_169575_-	conjugative relaxase	NA	NA	NA	NA	NA
WP_066564164.1|169579_171874_-	type IV secretion system DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_066564166.1|171863_172154_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021243667.1|172835_173054_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066564168.1|173175_173397_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066564174.1|174866_175856_-	DUF2493 domain-containing protein	NA	NA	NA	NA	NA
WP_066564177.1|176990_177320_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021243545.1|177372_177702_-	single-stranded DNA-binding protein	NA	NA	NA	NA	NA
WP_021243547.1|178636_178963_-	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA	NA
WP_046765019.1|179417_180113_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046765018.1|180276_180471_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046765017.1|180737_181106_-	hypothetical protein	NA	A0A1B1IUL8	uncultured_Mediterranean_phage	58.9	1.3e-32
WP_046765016.1|181108_181582_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046765015.1|181574_182087_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046765014.1|182211_182688_-	DUF736 domain-containing protein	NA	NA	NA	NA	NA
WP_046765013.1|182835_183162_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157035819.1|183191_183344_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145907784.1|183543_184188_+	plasmid pRiA4b ORF-3 family protein	NA	NA	NA	NA	NA
WP_046765011.1|184707_185352_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046765010.1|185482_186505_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082749226.1|186532_187009_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066564331.1|187419_187683_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158511791.1|187901_188930_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021243568.1|190054_190489_-	antirestriction protein	NA	I6WC98	Pseudomonas_phage	40.2	3.7e-18
WP_021243569.1|190723_190930_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021243570.1|190969_191581_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066564182.1|191656_191941_-	hypothetical protein	NA	K4JTS1	Caulobacter_virus	41.0	1.5e-07
WP_066553259.1|192268_193135_-	DUF1738 domain-containing protein	NA	A0A1V0EEV1	Caulobacter_phage	38.6	2.8e-41
WP_066553256.1|193304_195467_-|integrase	integrase	integrase	NA	NA	NA	NA
WP_066553254.1|195463_197251_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066553252.1|197247_198597_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_046766322.1|198754_199504_-	DUF1738 domain-containing protein	NA	A0A1V0EEV1	Caulobacter_phage	46.6	4.3e-46
WP_046766323.1|199582_201670_-	ParB N-terminal domain-containing protein	NA	G8DH78	Emiliania_huxleyi_virus	27.3	2.8e-31
WP_066564185.1|201745_203815_-	methylase	NA	A0A1Q3DLU0	Chionoecetes_opilio_bacilliform_virus	25.9	4.9e-07
203834:203872	attL	TTATCGCGAGGAAGCGGTAATGCGGAGGAGCGCGGCGTA	NA	NA	NA	NA
WP_009823939.1|203917_204922_-|integrase	site-specific integrase	integrase	S6C485	Thermus_phage	26.9	6.2e-08
WP_009823940.1|204918_206274_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_007015824.1|206270_207503_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A0K2CP59	Brevibacillus_phage	22.2	1.6e-05
207595:207633	attR	TACGCCGCGCTCCTCCGCATTACCGCTTCCTCGCGATAA	NA	NA	NA	NA
>prophage 3
NZ_CP005085	Sphingobium sp. TKS plasmid pTK1, complete sequence	520614	375677	409819	520614	coat,transposase	Escherichia_phage(42.86%)	35	NA	NA
WP_021244700.1|375677_376151_+|coat	spore coat protein U domain-containing protein	coat	NA	NA	NA	NA
WP_021244699.1|376155_376884_+	molecular chaperone	NA	NA	NA	NA	NA
WP_059140381.1|376963_379234_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
WP_059140382.1|379302_379701_+|coat	spore coat protein U domain-containing protein	coat	NA	NA	NA	NA
WP_001389365.1|381514_382279_-|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_066564280.1|382994_384557_-	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA	NA
WP_066564284.1|384553_385297_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017503343.1|385293_385605_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017503342.1|385601_385778_-	hypothetical protein	NA	NA	NA	NA	NA
WP_026109654.1|385774_386002_-	conjugal transfer protein TraD	NA	NA	NA	NA	NA
WP_066564286.1|386039_386345_-	conjugal transfer protein TraD	NA	NA	NA	NA	NA
WP_017503339.1|386518_389677_+	Ti-type conjugative transfer relaxase TraA	NA	V5UQN3	Mycobacterium_phage	26.9	1.4e-13
WP_017503338.1|389837_390572_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066564288.1|390618_390867_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_017503336.1|391126_392044_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	28.9	2.5e-11
WP_051035835.1|392362_392575_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038293089.1|392571_392955_+	response regulator	NA	NA	NA	NA	NA
WP_017503332.1|393222_393636_-	DUF2442 domain-containing protein	NA	NA	NA	NA	NA
WP_017503331.1|393622_393871_-	DUF4160 domain-containing protein	NA	NA	NA	NA	NA
WP_017503330.1|394068_394308_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062121909.1|394346_394685_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158511798.1|394869_395028_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007681980.1|395040_395346_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001389365.1|395620_396385_+|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_007684590.1|398315_398519_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007684587.1|398707_399385_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007684585.1|399364_399997_-	type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein	NA	NA	NA	NA	NA
WP_007684583.1|400136_401243_-	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA	NA
WP_001389365.1|401309_402074_-|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_013039076.1|402909_403479_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007683381.1|403413_404268_-	isoprenylcysteine carboxylmethyltransferase family protein	NA	NA	NA	NA	NA
WP_007683380.1|404264_404528_-	DUF2933 domain-containing protein	NA	NA	NA	NA	NA
WP_021226801.1|404775_406137_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021226800.1|406133_406739_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	45.5	8.8e-34
WP_031298420.1|406885_409819_+|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	34.1	1.1e-150
>prophage 4
NZ_CP005085	Sphingobium sp. TKS plasmid pTK1, complete sequence	520614	453502	516462	520614	integrase,transposase	uncultured_Caudovirales_phage(23.53%)	56	512747:512785	516508:516546
WP_001389365.1|453502_454267_+|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_007683385.1|454551_455298_+	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
WP_007683387.1|455372_455984_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_007683389.1|455995_456928_+	phytanoyl-CoA dioxygenase	NA	NA	NA	NA	NA
WP_009823965.1|456991_457330_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007683393.1|457326_457992_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_007683396.1|457988_458327_+	TrbC/VirB2 family protein	NA	NA	NA	NA	NA
WP_007683398.1|458323_458674_+	type VI secretion protein	NA	NA	NA	NA	NA
WP_007683400.1|458660_461078_+	VirB4 family type IV secretion/conjugal transfer ATPase	NA	NA	NA	NA	NA
WP_007683402.1|461081_461795_+	type VI secretion protein	NA	NA	NA	NA	NA
WP_150132838.1|461791_462010_+	EexN family lipoprotein	NA	NA	NA	NA	NA
WP_007683405.1|462031_462976_+	type IV secretion system protein	NA	NA	NA	NA	NA
WP_007683408.1|463312_464011_+	conjugal transfer protein TraJ	NA	NA	NA	NA	NA
WP_007683410.1|464007_464865_+	P-type conjugative transfer protein VirB9	NA	NA	NA	NA	NA
WP_014072617.1|464868_466086_+	conjugal transfer protein TrbI	NA	NA	NA	NA	NA
WP_007683413.1|466089_467094_+	P-type DNA transfer ATPase VirB11	NA	NA	NA	NA	NA
WP_007683415.1|467077_469042_+	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA	NA
WP_073507149.1|469031_469916_+	DNA transfer protein	NA	NA	NA	NA	NA
WP_007683417.1|469995_473466_+	DNA methyltransferase	NA	Q6NE04	Leptospira_phage	22.4	8.4e-28
WP_007683419.1|473557_474811_+	DNA repair exonuclease	NA	NA	NA	NA	NA
WP_007683421.1|474813_478254_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_007683423.1|478413_480480_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_014072624.1|480472_482245_+	ATP-dependent helicase	NA	NA	NA	NA	NA
WP_009823952.1|482576_482804_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007688041.1|483043_484093_-	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA	NA
WP_007688042.1|484085_484694_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007688043.1|484862_485984_-	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA	NA
WP_007688044.1|485976_486537_-	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA	NA
WP_007688045.1|486743_487691_-	ParB/RepB/Spo0J family partition protein	NA	I3NLC2	Bifidobacterium_phage	35.8	4.6e-13
WP_007688046.1|487690_488455_-	ParA family protein	NA	B0ZSI1	Halomonas_phage	28.9	8.9e-07
WP_009823948.1|488835_489204_-	DUF3768 domain-containing protein	NA	L7TKV8	Rhizobium_phage	44.0	3.6e-14
WP_007688059.1|489535_489763_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066553268.1|490490_492356_+	RNA-directed DNA polymerase	NA	A0A0U4J920	Pseudomonas_phage	38.0	2.4e-29
WP_007688063.1|492521_493073_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009823947.1|493150_493393_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007688066.1|493620_494055_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007688067.1|494130_494538_-	single-stranded DNA-binding protein	NA	A0A0M3LP44	Mannheimia_phage	35.9	1.2e-13
WP_007688068.1|494945_495614_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007688069.1|495726_496668_-	DUF2493 domain-containing protein	NA	A0A0D4DBJ6	Vibrio_phage	35.3	6.0e-05
WP_007688070.1|497015_497756_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	71.6	3.7e-74
WP_007688071.1|497755_498187_-	GNAT family N-acetyltransferase	NA	A0A2H4J155	uncultured_Caudovirales_phage	44.7	1.8e-20
WP_007688072.1|498183_499251_-	ACR3 family arsenite efflux transporter	NA	NA	NA	NA	NA
WP_007688073.1|499247_499688_-	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	69.3	7.0e-49
WP_007688074.1|499684_500221_-	arsenate reductase ArsC	NA	A0A2H4J8A6	uncultured_Caudovirales_phage	36.9	2.6e-21
WP_007688075.1|500233_500653_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_066564295.1|500624_500894_-	antirestriction protein ArdC	NA	NA	NA	NA	NA
WP_066553259.1|501221_502088_-	DUF1738 domain-containing protein	NA	A0A1V0EEV1	Caulobacter_phage	38.6	2.8e-41
WP_066553256.1|502257_504420_-|integrase	integrase	integrase	NA	NA	NA	NA
WP_066553254.1|504416_506204_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066553252.1|506200_507550_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_066564298.1|507707_508454_-	DUF1738 domain-containing protein	NA	A0A1V0EEV1	Caulobacter_phage	41.1	4.4e-35
WP_007688079.1|508546_510559_-	ParB N-terminal domain-containing protein	NA	G8DH78	Emiliania_huxleyi_virus	27.5	4.5e-34
WP_009823943.1|510670_512647_-	methylase	NA	NA	NA	NA	NA
512747:512785	attL	TTATCGCGAGGAAGCGGTAATGCGGAGGAGCGCGGCGTA	NA	NA	NA	NA
WP_007015824.1|512876_514109_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0K2CP59	Brevibacillus_phage	22.2	1.6e-05
WP_009823940.1|514105_515461_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_009823939.1|515457_516462_+|integrase	site-specific integrase	integrase	S6C485	Thermus_phage	26.9	6.2e-08
516508:516546	attR	TACGCCGCGCTCCTCCGCATTACCGCTTCCTCGCGATAA	NA	NA	NA	NA
>prophage 1
NZ_CP005087	Sphingobium sp. TKS plasmid pTK3, complete sequence	87635	1551	61350	87635	transposase	Escherichia_phage(30.43%)	56	NA	NA
WP_011627729.1|1551_4509_-|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	44.6	1.5e-235
WP_013039114.1|4648_5242_+	recombinase family protein	NA	A0A1S6L009	Salmonella_phage	56.6	2.2e-45
WP_082749261.1|5303_5726_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066564794.1|5909_6104_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066564796.1|6100_6751_-	hypothetical protein	NA	B7SYF4	Stenotrophomonas_phage	27.8	4.7e-09
WP_066564798.1|6998_7658_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145907848.1|7914_8175_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082749265.1|8579_8831_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066564805.1|8946_9282_-	hypothetical protein	NA	NA	NA	NA	NA
WP_128830664.1|9268_9460_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157846831.1|9453_9615_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025547075.1|9743_10505_+	damage-inducible protein	NA	NA	NA	NA	NA
WP_025547077.1|10419_11940_+	DNA polymerase Y family protein	NA	NA	NA	NA	NA
WP_162195970.1|12003_12165_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025547078.1|12190_12532_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025547079.1|12789_16056_+	DNA polymerase III subunit alpha	NA	A0A0K1Y8T6	Streptomyces_phage	27.8	1.1e-85
WP_066564807.1|16430_17381_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001389365.1|17399_18164_-|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_015460616.1|18263_18899_+	AAA family ATPase	NA	A4JWV7	Burkholderia_virus	52.6	1.2e-44
WP_015460617.1|18924_19206_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015460618.1|19262_20174_-	replication initiation protein	NA	A0A1V0E006	Clostridioides_phage	32.3	3.1e-06
WP_015449229.1|22010_22739_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	39.3	5.6e-35
WP_015449228.1|22725_24243_-|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	26.2	4.8e-12
WP_006961816.1|26291_27158_+	recombinase family protein	NA	E5FFF9	Burkholderia_phage	40.0	4.8e-25
WP_015460621.1|28804_29029_-	conjugal transfer protein TraD	NA	NA	NA	NA	NA
WP_015460622.1|29066_29372_-	conjugal transfer protein TraD	NA	NA	NA	NA	NA
WP_015460623.1|29544_32679_+	Ti-type conjugative transfer relaxase TraA	NA	V5UQN3	Mycobacterium_phage	25.3	2.9e-11
WP_015460630.1|32686_33409_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001389365.1|33818_34583_-|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_007682112.1|34611_34866_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066564812.1|34951_35842_+	haloalkane dehalogenase	NA	B9U1C3	Vaccinia_virus	43.0	1.1e-56
WP_001389365.1|36001_36766_-|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_029987071.1|36810_37371_+	recombinase family protein	NA	A0A0C4UR34	Shigella_phage	51.2	3.0e-36
WP_007682056.1|37402_37711_+	BrnT family toxin	NA	NA	NA	NA	NA
WP_007682049.1|37691_38024_+	BrnA antitoxin family protein	NA	NA	NA	NA	NA
WP_007682041.1|38485_39160_-|transposase	IS5 family transposase	transposase	A0A0M5M147	Mycobacterium_phage	31.9	4.3e-05
WP_145907151.1|39342_39636_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081440685.1|39580_40249_-	EthD domain-containing protein	NA	NA	NA	NA	NA
WP_007682039.1|40294_41056_-	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	28.2	8.8e-15
WP_001389365.1|42129_42894_+|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_082749263.1|42912_43353_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_013040178.1|43419_44334_-	prolyl oligopeptidase family serine peptidase	NA	NA	NA	NA	NA
WP_007686274.1|44555_45314_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_059153310.1|45773_47417_+	AMP-binding protein	NA	A0A1V0SBX8	Catovirus	25.3	1.9e-14
WP_001389365.1|48437_49202_+|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_066564816.1|49220_49637_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145907851.1|50079_50346_+	HTH domain-containing protein	NA	NA	NA	NA	NA
WP_086400806.1|51125_51419_+	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_030092291.1|51445_51814_+	HEPN domain-containing protein	NA	NA	NA	NA	NA
WP_066564817.1|51892_52561_+	ParA family protein	NA	D4HTX7	Vibrio_phage	33.5	7.0e-16
WP_021238836.1|52553_52841_+	hypothetical protein	NA	NA	NA	NA	NA
WP_030092293.1|52873_53929_-	replication initiator protein A	NA	A0A0K1Y6J9	Rhodobacter_phage	38.8	7.8e-62
WP_021238840.1|54511_54748_-	conjugal transfer protein TraD	NA	NA	NA	NA	NA
WP_030092294.1|54842_55091_-	conjugal transfer protein TraD	NA	NA	NA	NA	NA
WP_006953933.1|57431_58298_-	recombinase family protein	NA	A0A0F7LA37	Escherichia_phage	40.6	6.7e-27
WP_021224283.1|58440_61350_-|transposase	Tn3 family transposase	transposase	NA	NA	NA	NA
>prophage 1
NZ_CP005088	Sphingobium sp. TKS plasmid pTK4, complete sequence	75938	6822	59237	75938	integrase,transposase	Escherichia_phage(38.89%)	48	NA	NA
WP_001389365.1|6822_7587_+|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_013040175.1|7650_8634_+	alpha-ketoacid dehydrogenase subunit beta	NA	E3SJ83	Synechococcus_phage	23.7	3.3e-06
WP_007682525.1|8630_8870_+	acyltransferase	NA	NA	NA	NA	NA
WP_066564838.1|8987_11522_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_007682022.1|11692_12634_+	XdhC family protein	NA	NA	NA	NA	NA
WP_007682023.1|12630_13623_+	molybdopterin-binding protein	NA	NA	NA	NA	NA
WP_007682024.1|13661_15008_+	glutathione-disulfide reductase	NA	NA	NA	NA	NA
WP_007682027.1|15142_16381_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_007682029.1|16748_17501_+	glucose 1-dehydrogenase	NA	Q06VL0	Trichoplusia_ni_ascovirus	31.3	3.2e-17
WP_145907861.1|17824_18067_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007682510.1|17949_18522_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_013040172.1|18582_19053_+	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_021319354.1|19634_20639_+	FAD-binding protein	NA	NA	NA	NA	NA
WP_001389365.1|20657_21422_-|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_015460611.1|21887_22640_+	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.5	4.3e-14
WP_007682394.1|22661_23348_+	EthD domain-containing protein	NA	NA	NA	NA	NA
WP_007682395.1|23347_23710_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001389365.1|23807_24572_-|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_007682496.1|25859_26108_+	type II toxin-antitoxin system VapB family antitoxin	NA	NA	NA	NA	NA
WP_007682494.1|26104_26494_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_007682492.1|26493_26799_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007682491.1|26795_27194_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007682488.1|27193_28156_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_007683624.1|28219_29317_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_004211466.1|29767_30631_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	33.2	1.4e-29
WP_007684572.1|31176_32373_-|transposase	IS256 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	43.0	1.9e-80
WP_001389365.1|32757_33522_+|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_066564841.1|33912_36285_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_001389365.1|36455_37220_-|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_007685994.1|37412_38105_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041386987.1|39308_39503_-	helix-turn-helix domain-containing protein	NA	Q786F1	Bacillus_phage	39.7	8.0e-05
WP_013038672.1|39538_40276_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013038673.1|40433_43559_-	Ti-type conjugative transfer relaxase TraA	NA	V5UQN3	Mycobacterium_phage	26.9	7.3e-15
WP_013038674.1|43735_44041_+	conjugal transfer protein TraD	NA	NA	NA	NA	NA
WP_013038675.1|44078_44315_+	conjugal transfer protein TraD	NA	NA	NA	NA	NA
WP_013038676.1|44307_44583_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013038677.1|44579_44864_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013038678.1|44860_45796_+	HEPN domain-containing protein	NA	NA	NA	NA	NA
WP_013038679.1|45792_46509_+	SIMPL domain-containing protein	NA	NA	NA	NA	NA
WP_013038680.1|46515_48177_+	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA	NA
WP_013038681.1|48214_48676_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006961816.1|49478_50345_-	recombinase family protein	NA	E5FFF9	Burkholderia_phage	40.0	4.8e-25
WP_015449228.1|52393_53911_+|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	26.2	4.8e-12
WP_015449229.1|53897_54626_+	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	39.3	5.6e-35
WP_015460618.1|56462_57374_+	replication initiation protein	NA	A0A1V0E006	Clostridioides_phage	32.3	3.1e-06
WP_015460617.1|57430_57712_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015460616.1|57737_58373_-	AAA family ATPase	NA	A4JWV7	Burkholderia_virus	52.6	1.2e-44
WP_001389365.1|58472_59237_+|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
