assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001562215.1_ASM156221v1	NZ_CP014274	Stenotrophomonas sp. KCTC 12332, complete genome	1	303432-303564	1	CRISPRCasFinder	no	DEDDh,csa3	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	Type I-A	CCCCCTCTCCCCAACCCCTCTCCCGCAAGGGGAGAGGGGCT	41	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	NA,NA|228aa|down_9|NZ_CP014274.1_320996_321680_+	NA|176aa|up_9|NZ_CP014274.1_293220_293748_+	PRK13264, PRK13264, 3-hydroxyanthranilate 3,4-dioxygenase; Provisional	NA|425aa|up_8|NZ_CP014274.1_293798_295073_+	TIGR01814, kynureninase, kynureninase	NA|457aa|up_7|NZ_CP014274.1_295091_296462_+	COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion]	DEDDh|480aa|up_6|NZ_CP014274.1_296461_297901_+	PRK11779, sbcB, exonuclease I; Provisional	NA|229aa|up_5|NZ_CP014274.1_297897_298584_+	TIGR02453, conserved_hypothetical_protein, TIGR02453 family protein	NA|158aa|up_4|NZ_CP014274.1_298655_299129_+	cd07814, SRPBCC_CalC_Aha1-like, Putative hydrophobic ligand-binding SRPBCC domain of Micromonospora echinospora CalC, human Aha1, and related proteins	NA|185aa|up_3|NZ_CP014274.1_299148_299703_+	pfam11159, DUF2939, Protein of unknown function (DUF2939)	NA|458aa|up_2|NZ_CP014274.1_299718_301092_-	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|315aa|up_1|NZ_CP014274.1_301563_302508_-	pfam06189, 5-nucleotidase, 5'-nucleotidase	NA|255aa|up_0|NZ_CP014274.1_302607_303372_-	PRK04761, ppnK, inorganic polyphosphate/ATP-NAD kinase; Reviewed	NA|1661aa|down_0|NZ_CP014274.1_303720_308703_-	pfam05088, Bac_GDH, Bacterial NAD-glutamate dehydrogenase	NA|221aa|down_1|NZ_CP014274.1_308949_309612_+	pfam14246, TetR_C_7, AefR-like transcriptional repressor, C-terminal region	NA|394aa|down_2|NZ_CP014274.1_309611_310793_+	PRK09578, PRK09578, MexX/AxyX family multidrug efflux RND transporter periplasmic adaptor subunit	NA|1055aa|down_3|NZ_CP014274.1_310805_313970_+	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family	NA|383aa|down_4|NZ_CP014274.1_314169_315318_-	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	csa3|310aa|down_5|NZ_CP014274.1_315445_316375_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|360aa|down_6|NZ_CP014274.1_316396_317476_+	PRK09490, metH, B12-dependent methionine synthase; Provisional	NA|201aa|down_7|NZ_CP014274.1_317486_318089_+	PRK07578, PRK07578, short chain dehydrogenase; Provisional	NA|945aa|down_8|NZ_CP014274.1_318088_320923_+	PRK09490, metH, B12-dependent methionine synthase; Provisional	NA|228aa|down_9|NZ_CP014274.1_320996_321680_+	NA
GCF_001562215.1_ASM156221v1	NZ_CP014274	Stenotrophomonas sp. KCTC 12332, complete genome	2	334957-335101	1	PILER-CR	no	csa3	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	Type I-A	GTGGGCTCGGGCGATGTCGAGCTCAACGGCGTGC	34	0	0	NA	NA	NA	2	2	Orphan	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	NA|81aa|up_3|NZ_CP014274.1_331997_332240_+,NA|328aa|up_0|NZ_CP014274.1_333471_334455_+,NA|143aa|down_1|NZ_CP014274.1_335973_336402_+	NA|693aa|up_9|NZ_CP014274.1_325820_327899_-	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|225aa|up_8|NZ_CP014274.1_327946_328621_-	COG3122, COG3122, Uncharacterized protein conserved in bacteria [Function unknown]	NA|80aa|up_7|NZ_CP014274.1_328629_328869_-	PRK00846, PRK00846, hypothetical protein; Provisional	NA|450aa|up_6|NZ_CP014274.1_328861_330211_-	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]	NA|327aa|up_5|NZ_CP014274.1_330236_331217_-	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]	NA|202aa|up_4|NZ_CP014274.1_331302_331908_-	COG0386, BtuE, Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]	NA|81aa|up_3|NZ_CP014274.1_331997_332240_+	NA	NA|121aa|up_2|NZ_CP014274.1_332243_332606_+	COG1725, COG1725, Predicted transcriptional regulators [Transcription]	NA|291aa|up_1|NZ_CP014274.1_332602_333475_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|328aa|up_0|NZ_CP014274.1_333471_334455_+	NA	NA|195aa|down_0|NZ_CP014274.1_335331_335916_+	pfam11101, DUF2884, Protein of unknown function (DUF2884)	NA|143aa|down_1|NZ_CP014274.1_335973_336402_+	NA	NA|470aa|down_2|NZ_CP014274.1_336576_337986_-	PRK00485, fumC, fumarate hydratase; Reviewed	NA|461aa|down_3|NZ_CP014274.1_338189_339572_+	PRK09285, PRK09285, adenylosuccinate lyase; Provisional	NA|492aa|down_4|NZ_CP014274.1_339965_341441_+	COG2850, COG2850, Uncharacterized conserved protein [Function unknown]	NA|302aa|down_5|NZ_CP014274.1_341437_342343_+	COG2153, ElaA, Predicted acyltransferase [General function prediction only]	NA|944aa|down_6|NZ_CP014274.1_342518_345350_+	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed	NA|404aa|down_7|NZ_CP014274.1_345392_346604_+	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA|475aa|down_8|NZ_CP014274.1_346730_348155_+	PRK06327, PRK06327, dihydrolipoamide dehydrogenase; Validated	NA|198aa|down_9|NZ_CP014274.1_348280_348874_+	TIGR00730, LOG_family_protein_YJL055W, TIGR00730 family protein
GCF_001562215.1_ASM156221v1	NZ_CP014274	Stenotrophomonas sp. KCTC 12332, complete genome	3	783928-784004	2	CRISPRCasFinder	no	csa3	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	Type I-A	ACATGTAGTGCCGAGCCATGCTCG	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	NA|83aa|up_9|NZ_CP014274.1_772251_772500_+,NA|200aa|up_6|NZ_CP014274.1_775767_776367_+,NA|166aa|up_2|NZ_CP014274.1_778952_779450_+,NA	NA|83aa|up_9|NZ_CP014274.1_772251_772500_+	NA	NA|264aa|up_8|NZ_CP014274.1_772593_773385_-	pfam14257, DUF4349, Domain of unknown function (DUF4349)	NA|601aa|up_7|NZ_CP014274.1_773704_775507_+	pfam05960, DUF885, Bacterial protein of unknown function (DUF885)	NA|200aa|up_6|NZ_CP014274.1_775767_776367_+	NA	NA|329aa|up_5|NZ_CP014274.1_776588_777575_+	cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase	NA|194aa|up_4|NZ_CP014274.1_777691_778273_+	COG3548, COG3548, Predicted integral membrane protein [Function unknown]	NA|152aa|up_3|NZ_CP014274.1_778432_778888_+	pfam08818, DUF1801, Domain of unknown function (DU1801)	NA|166aa|up_2|NZ_CP014274.1_778952_779450_+	NA	NA|611aa|up_1|NZ_CP014274.1_779783_781616_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|517aa|up_0|NZ_CP014274.1_781826_783377_-	pfam00144, Beta-lactamase, Beta-lactamase	NA|276aa|down_0|NZ_CP014274.1_784136_784964_+	pfam01904, DUF72, Protein of unknown function DUF72	NA|307aa|down_1|NZ_CP014274.1_785010_785931_+	pfam00892, EamA, EamA-like transporter family	NA|355aa|down_2|NZ_CP014274.1_786117_787182_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|241aa|down_3|NZ_CP014274.1_787308_788031_-	PRK10475, PRK10475, 23S rRNA pseudouridine(2604) synthase RluF	NA|559aa|down_4|NZ_CP014274.1_788085_789762_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|661aa|down_5|NZ_CP014274.1_789948_791931_-	PRK11634, PRK11634, ATP-dependent RNA helicase DeaD; Provisional	NA|88aa|down_6|NZ_CP014274.1_792126_792390_+	pfam13275, S4_2, S4 domain	NA|393aa|down_7|NZ_CP014274.1_792632_793811_-	PRK09126, PRK09126, FAD-dependent hydroxylase	NA|186aa|down_8|NZ_CP014274.1_793954_794512_-	pfam13211, DUF4019, Protein of unknown function (DUF4019)	NA|497aa|down_9|NZ_CP014274.1_795910_797401_+	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair]
GCF_001562215.1_ASM156221v1	NZ_CP014274	Stenotrophomonas sp. KCTC 12332, complete genome	4	1039452-1039558	3	CRISPRCasFinder	no	DinG	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	Type IV-A	CAGCCGAGCATGGCTCGGCTCTAC	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	NA|172aa|up_3|NZ_CP014274.1_1033248_1033764_+,NA|344aa|down_7|NZ_CP014274.1_1065341_1066373_+	DinG|704aa|up_9|NZ_CP014274.1_1021972_1024084_-	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]	NA|178aa|up_8|NZ_CP014274.1_1024232_1024766_-	sd00006, TPR, Tetratricopeptide repeat	NA|809aa|up_7|NZ_CP014274.1_1024774_1027201_-	TIGR02071, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein 1B	NA|701aa|up_6|NZ_CP014274.1_1027297_1029400_+	cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function	NA|477aa|up_5|NZ_CP014274.1_1029469_1030900_-	PRK11447, PRK11447, cellulose synthase subunit BcsC; Provisional	NA|719aa|up_4|NZ_CP014274.1_1031030_1033187_-	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]	NA|172aa|up_3|NZ_CP014274.1_1033248_1033764_+	NA	NA|174aa|up_2|NZ_CP014274.1_1033836_1034358_+	pfam13511, DUF4124, Domain of unknown function (DUF4124)	NA|1401aa|up_1|NZ_CP014274.1_1034366_1038569_-	PRK11131, PRK11131, ATP-dependent RNA helicase HrpA; Provisional	NA|199aa|up_0|NZ_CP014274.1_1038657_1039254_+	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|601aa|down_0|NZ_CP014274.1_1039651_1041454_+	TIGR01389, recQ, ATP-dependent DNA helicase RecQ	NA|544aa|down_1|NZ_CP014274.1_1041488_1043120_-	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion]	NA|1635aa|down_2|NZ_CP014274.1_1043119_1048024_-	NF033176, auto_AIDA-I, autotransporter adhesin AIDA-I	NA|4026aa|down_3|NZ_CP014274.1_1048092_1060170_-	NF012204, adhes_FxxPxG, leukotoxin LktA family filamentous adhesin	NA|252aa|down_4|NZ_CP014274.1_1060276_1061032_-	pfam07277, SapC, SapC	NA|918aa|down_5|NZ_CP014274.1_1061570_1064324_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|184aa|down_6|NZ_CP014274.1_1064344_1064896_-	TIGR02999, Sig-70_X6, RNA polymerase sigma factor, TIGR02999 family	NA|344aa|down_7|NZ_CP014274.1_1065341_1066373_+	NA	NA|224aa|down_8|NZ_CP014274.1_1066748_1067420_-	pfam06508, QueC, Queuosine biosynthesis protein QueC	NA|230aa|down_9|NZ_CP014274.1_1067498_1068188_-	TIGR04349, Radical_SAM_domain_protein, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE, gammaproteobacterial type
GCF_001562215.1_ASM156221v1	NZ_CP014274	Stenotrophomonas sp. KCTC 12332, complete genome	5	1105995-1106076	4	CRISPRCasFinder	no		DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	Orphan	CCCCTCTCCCGCATGCGGGAGAGGGG	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	NA,NA|294aa|down_3|NZ_CP014274.1_1111451_1112333_-	NA|415aa|up_9|NZ_CP014274.1_1091716_1092961_-	COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]	NA|298aa|up_8|NZ_CP014274.1_1093033_1093927_-	PRK15442, PRK15442, beta-lactamase TEM; Provisional	NA|292aa|up_7|NZ_CP014274.1_1094109_1094985_+	cd08484, PBP2_LTTR_beta_lactamase, The C-terminal substrate-domain of LysR-type transcriptional regulators for beta-lactamase genes, contains the type 2 periplasmic binding fold	NA|625aa|up_6|NZ_CP014274.1_1095115_1096990_-	PRK10636, PRK10636, putative ABC transporter ATP-binding protein; Provisional	NA|793aa|up_5|NZ_CP014274.1_1097301_1099680_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|571aa|up_4|NZ_CP014274.1_1100013_1101726_+	PRK10669, PRK10669, putative cation:proton antiport protein; Provisional	NA|293aa|up_3|NZ_CP014274.1_1101701_1102580_-	pfam06445, GyrI-like, GyrI-like small molecule binding domain	NA|309aa|up_2|NZ_CP014274.1_1102623_1103550_-	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|217aa|up_1|NZ_CP014274.1_1103671_1104322_+	COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only]	NA|429aa|up_0|NZ_CP014274.1_1104557_1105844_-	PRK06084, PRK06084, bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	NA|863aa|down_0|NZ_CP014274.1_1106139_1108728_-	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB	NA|271aa|down_1|NZ_CP014274.1_1108903_1109716_-	pfam11219, DUF3014, Protein of unknown function (DUF3014)	NA|526aa|down_2|NZ_CP014274.1_1109809_1111387_-	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and    metabolism]	NA|294aa|down_3|NZ_CP014274.1_1111451_1112333_-	NA	NA|158aa|down_4|NZ_CP014274.1_1112397_1112871_-	pfam12098, DUF3574, Protein of unknown function (DUF3574)	NA|811aa|down_5|NZ_CP014274.1_1113053_1115486_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|444aa|down_6|NZ_CP014274.1_1115824_1117156_+	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA	NA|249aa|down_7|NZ_CP014274.1_1117469_1118216_+	cd01627, HAD_TPP, trehalose-phosphate phosphatase similar to Escherichia coli trehalose-6-phosphate phosphatase OtsB and Saccharomyces cerevisiae trehalose-phosphatase TPS2	NA|593aa|down_8|NZ_CP014274.1_1118268_1120047_+	COG3387, SGA1, Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]	NA|456aa|down_9|NZ_CP014274.1_1120043_1121411_+	TIGR02400, Alphaalpha-trehalose-phosphate_synthase, alpha,alpha-trehalose-phosphate synthase [UDP-forming]
GCF_001562215.1_ASM156221v1	NZ_CP014274	Stenotrophomonas sp. KCTC 12332, complete genome	6	1134057-1134192	5	CRISPRCasFinder	no		DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	Orphan	CCCCTCTCCCGTTTACGGGAGAGGGGTTGGGGTGAGGGCGCTTT	44	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	NA,NA	NA|184aa|up_9|NZ_CP014274.1_1121964_1122516_-	pfam13761, DUF4166, Domain of unknown function (DUF4166)	NA|260aa|up_8|NZ_CP014274.1_1122500_1123280_-	PRK10723, PRK10723, polyphenol oxidase	NA|330aa|up_7|NZ_CP014274.1_1123279_1124269_-	PRK11180, rluD, 23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA|295aa|up_6|NZ_CP014274.1_1124386_1125271_+	COG4105, ComL, DNA uptake lipoprotein [General function prediction only]	NA|546aa|up_5|NZ_CP014274.1_1125690_1127328_-	PRK13981, PRK13981, NAD synthetase; Provisional	NA|127aa|up_4|NZ_CP014274.1_1127329_1127710_-	cd01038, Endonuclease_DUF559, Domain of unknown function, appears to be related to a diverse group of endonucleases	NA|292aa|up_3|NZ_CP014274.1_1128589_1129465_-	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated	NA|390aa|up_2|NZ_CP014274.1_1129486_1130656_-	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta	NA|542aa|up_1|NZ_CP014274.1_1130913_1132539_+	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|468aa|up_0|NZ_CP014274.1_1132597_1134001_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|577aa|down_0|NZ_CP014274.1_1134240_1135971_-	TIGR02538, Type_IV_pilus_assembly_protein_PilF, type IV-A pilus assembly ATPase PilB	NA|138aa|down_1|NZ_CP014274.1_1136805_1137219_-	COG4969, PilA, Tfp pilus assembly protein, major pilin PilA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|419aa|down_2|NZ_CP014274.1_1137755_1139012_+	COG1459, PulF, Type II secretory pathway, component PulF [Cell motility and secretion / Intracellular trafficking and secretion]	NA|289aa|down_3|NZ_CP014274.1_1139015_1139882_+	COG1989, PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases [Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]	NA|206aa|down_4|NZ_CP014274.1_1139937_1140555_+	PRK00081, coaE, dephospho-CoA kinase; Reviewed	NA|447aa|down_5|NZ_CP014274.1_1140717_1142058_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|226aa|down_6|NZ_CP014274.1_1142050_1142728_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|292aa|down_7|NZ_CP014274.1_1143090_1143966_-	PRK10446, PRK10446, 30S ribosomal protein S6--L-glutamate ligase	NA|607aa|down_8|NZ_CP014274.1_1144423_1146244_-	cd01847, Triacylglycerol_lipase_like, Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases	NA|67aa|down_9|NZ_CP014274.1_1146388_1146589_+	PRK05659, PRK05659, sulfur carrier protein ThiS; Validated
GCF_001562215.1_ASM156221v1	NZ_CP014274	Stenotrophomonas sp. KCTC 12332, complete genome	7	1269565-1269652	6	CRISPRCasFinder	no		DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	Orphan	AGCGTGGTGCCGAGCCATGCTCGGCAG	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	NA|110aa|up_2|NZ_CP014274.1_1266456_1266786_-,NA|225aa|down_1|NZ_CP014274.1_1270691_1271366_+,NA|158aa|down_8|NZ_CP014274.1_1279666_1280140_-	NA|64aa|up_9|NZ_CP014274.1_1256204_1256396_-	COG1773, COG1773, Rubredoxin [Energy production and conversion]	NA|209aa|up_8|NZ_CP014274.1_1256465_1257092_+	PRK00043, thiE, thiamine phosphate synthase	NA|431aa|up_7|NZ_CP014274.1_1257266_1258559_+	PRK00062, PRK00062, glutamate-1-semialdehyde 2,1-aminomutase	NA|131aa|up_6|NZ_CP014274.1_1258834_1259227_-	cd13922, Azurin, Azurin is a redox partner for enzymes such as nitrite reductase or arsenite oxidase	NA|198aa|up_5|NZ_CP014274.1_1259423_1260017_+	cd02603, HAD_sEH-N_like, N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX/HAD4 alpha-D-glucose 1-phosphate phosphatase, and related domains, may be inactive	NA|1332aa|up_4|NZ_CP014274.1_1260093_1264089_-	pfam03797, Autotransporter, Autotransporter beta-domain	NA|814aa|up_3|NZ_CP014274.1_1263776_1266218_-	cd00063, FN3, Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin	NA|110aa|up_2|NZ_CP014274.1_1266456_1266786_-	NA	NA|409aa|up_1|NZ_CP014274.1_1267289_1268516_-	PRK04612, argD, acetylornithine transaminase	NA|288aa|up_0|NZ_CP014274.1_1268586_1269450_+	pfam00520, Ion_trans, Ion transport protein	NA|272aa|down_0|NZ_CP014274.1_1269733_1270549_-	PRK08278, PRK08278, SDR family oxidoreductase	NA|225aa|down_1|NZ_CP014274.1_1270691_1271366_+	NA	NA|221aa|down_2|NZ_CP014274.1_1271490_1272153_-	PRK12274, PRK12274, serine/threonine protein kinase; Provisional	NA|666aa|down_3|NZ_CP014274.1_1272273_1274271_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|203aa|down_4|NZ_CP014274.1_1274620_1275229_-	COG2802, COG2802, Uncharacterized protein, similar to the N-terminal domain of Lon protease [General function prediction only]	NA|455aa|down_5|NZ_CP014274.1_1275360_1276725_-	TIGR01081, mpl, UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase	NA|188aa|down_6|NZ_CP014274.1_1277055_1277619_-	PRK00279, adk, adenylate kinase; Reviewed	NA|419aa|down_7|NZ_CP014274.1_1277761_1279018_+	PRK14072, PRK14072, diphosphate--fructose-6-phosphate 1-phosphotransferase	NA|158aa|down_8|NZ_CP014274.1_1279666_1280140_-	NA	NA|676aa|down_9|NZ_CP014274.1_1280416_1282444_+	PRK00733, hppA, membrane-bound proton-translocating pyrophosphatase; Validated
GCF_001562215.1_ASM156221v1	NZ_CP014274	Stenotrophomonas sp. KCTC 12332, complete genome	8	1394770-1394877	7	CRISPRCasFinder	no		DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	Orphan	GTCAGCTTCGCGGCTTACGCCGCTCC	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	NA,NA|273aa|down_8|NZ_CP014274.1_1404155_1404974_-	NA|321aa|up_9|NZ_CP014274.1_1380686_1381649_-	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|504aa|up_8|NZ_CP014274.1_1382080_1383592_-	TIGR01249, Putative_proline_iminopeptidase, proline iminopeptidase, Neisseria-type subfamily	NA|570aa|up_7|NZ_CP014274.1_1383846_1385556_+	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|291aa|up_6|NZ_CP014274.1_1386471_1387344_-	cd16310, Mbl1b-like_MBL-B3, Caulobacter crescentus Mbl1b and related metallo-beta-lactamases, subclass B3; MBL-fold metallo-hydrolase domain	NA|562aa|up_5|NZ_CP014274.1_1387667_1389353_+	sd00006, TPR, Tetratricopeptide repeat	NA|213aa|up_4|NZ_CP014274.1_1389417_1390056_-	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|455aa|up_3|NZ_CP014274.1_1390238_1391603_-	PLN02611, PLN02611, glutamate--cysteine ligase	NA|233aa|up_2|NZ_CP014274.1_1391806_1392505_+	cd02432, Nodulin-21_like_1, Nodulin-21 and CCC1-related protein family	NA|278aa|up_1|NZ_CP014274.1_1392508_1393342_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|325aa|up_0|NZ_CP014274.1_1393443_1394418_+	cd07720, OPHC2-like_MBL-fold, Pseudomonas pseudoalcaligenes organophosphorus hydrolase C2, and related proteins; MBL-fold metallo hydrolase domain	NA|262aa|down_0|NZ_CP014274.1_1395688_1396474_+	COG2863, COG2863, Cytochrome c553 [Energy production and conversion]	NA|216aa|down_1|NZ_CP014274.1_1396568_1397216_+	cd03019, DsbA_DsbA, DsbA family, DsbA subfamily; DsbA is a monomeric thiol disulfide oxidoreductase protein containing a redox active CXXC motif imbedded in a TRX fold	NA|271aa|down_2|NZ_CP014274.1_1397335_1398148_+	cd03019, DsbA_DsbA, DsbA family, DsbA subfamily; DsbA is a monomeric thiol disulfide oxidoreductase protein containing a redox active CXXC motif imbedded in a TRX fold	NA|255aa|down_3|NZ_CP014274.1_1398192_1398957_+	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only]	NA|292aa|down_4|NZ_CP014274.1_1398966_1399842_-	PRK10532, PRK10532, threonine and homoserine efflux system; Provisional	NA|137aa|down_5|NZ_CP014274.1_1399981_1400392_-	COG0848, ExbD, Biopolymer transport protein [Intracellular trafficking and secretion]	NA|649aa|down_6|NZ_CP014274.1_1400574_1402521_+	PRK11619, PRK11619, lytic murein transglycosylase; Provisional	NA|412aa|down_7|NZ_CP014274.1_1402698_1403934_+	PRK10885, cca, multifunctional CCA addition/repair protein	NA|273aa|down_8|NZ_CP014274.1_1404155_1404974_-	NA	NA|356aa|down_9|NZ_CP014274.1_1405333_1406401_-	COG4299, COG4299, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_001562215.1_ASM156221v1	NZ_CP014274	Stenotrophomonas sp. KCTC 12332, complete genome	9	1639094-1639237	8	CRISPRCasFinder	no		DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	Orphan	CTGTAGTGCCGAGCCATGCTCGGCAG	26	0	0	NA	NA	NA	2	2	Orphan	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	NA,NA|64aa|down_6|NZ_CP014274.1_1646083_1646275_-	NA|205aa|up_9|NZ_CP014274.1_1627663_1628278_-	TIGR01711, Type_II_secretion_system_protein_J, type II secretion system protein J	NA|121aa|up_8|NZ_CP014274.1_1628274_1628637_-	TIGR01707, Type_II_secretion_system_protein_I, type II secretion system protein I	NA|194aa|up_7|NZ_CP014274.1_1628633_1629215_-	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion]	NA|143aa|up_6|NZ_CP014274.1_1629142_1629571_-	TIGR01710, Type_II_secretion_system_protein_G, type II secretion system protein G	NA|402aa|up_5|NZ_CP014274.1_1629578_1630784_-	TIGR02120, Putative_general_secretion_pathway_protein_F, type II secretion system protein F	NA|503aa|up_4|NZ_CP014274.1_1630812_1632321_-	TIGR02533, Type_II_secretion_system_protein_E, type II secretion system protein E	NA|155aa|up_3|NZ_CP014274.1_1632641_1633106_+	pfam11356, T2SSC, Type II secretion system protein C	NA|640aa|up_2|NZ_CP014274.1_1633102_1635022_+	TIGR02517, Putative_type_II_secretion_system_protein_D, type II secretion system protein D	NA|969aa|up_1|NZ_CP014274.1_1635113_1638020_+	pfam10462, Peptidase_M66, Peptidase M66	NA|185aa|up_0|NZ_CP014274.1_1638066_1638621_+	pfam11356, T2SSC, Type II secretion system protein C	NA|549aa|down_0|NZ_CP014274.1_1639431_1641078_-	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|96aa|down_1|NZ_CP014274.1_1641163_1641451_-	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|108aa|down_2|NZ_CP014274.1_1641940_1642264_+	pfam03091, CutA1, CutA1 divalent ion tolerance protein	NA|787aa|down_3|NZ_CP014274.1_1642267_1644628_+	COG4232, COG4232, Thiol:disulfide interchange protein [Posttranslational modification, protein turnover, chaperones / Energy production and conversion]	NA|197aa|down_4|NZ_CP014274.1_1644627_1645218_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|101aa|down_5|NZ_CP014274.1_1645607_1645910_-	PRK14900, valS, valyl-tRNA synthetase; Provisional	NA|64aa|down_6|NZ_CP014274.1_1646083_1646275_-	NA	NA|504aa|down_7|NZ_CP014274.1_1646277_1647789_-	TIGR01813, Fumarate_reductase_flavoprotein_subunit, flavocytochrome c	NA|387aa|down_8|NZ_CP014274.1_1647661_1648822_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|95aa|down_9|NZ_CP014274.1_1649074_1649359_+	cd11493, SLC5sbd_NIS-like_u1, uncharacterized subgroup of the Na(+)/iodide (NIS) cotransporter subfamily; putative solute-binding domain
GCF_001562215.1_ASM156221v1	NZ_CP014274	Stenotrophomonas sp. KCTC 12332, complete genome	10	2165381-2165470	9	CRISPRCasFinder	no		DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	Orphan	GGTGCGCTTCGCTTACCCGGGCTACCTTGG	30	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	NA|147aa|up_9|NZ_CP014274.1_2155221_2155662_-,NA|169aa|up_6|NZ_CP014274.1_2157811_2158318_-,NA|87aa|up_5|NZ_CP014274.1_2158521_2158782_-,NA	NA|147aa|up_9|NZ_CP014274.1_2155221_2155662_-	NA	NA|377aa|up_8|NZ_CP014274.1_2155661_2156792_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|244aa|up_7|NZ_CP014274.1_2157029_2157761_-	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional	NA|169aa|up_6|NZ_CP014274.1_2157811_2158318_-	NA	NA|87aa|up_5|NZ_CP014274.1_2158521_2158782_-	NA	NA|619aa|up_4|NZ_CP014274.1_2158783_2160640_-	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism]	NA|83aa|up_3|NZ_CP014274.1_2160636_2160885_-	pfam04023, FeoA, FeoA domain	NA|263aa|up_2|NZ_CP014274.1_2161010_2161799_+	PRK05995, PRK05995, enoyl-CoA hydratase; Provisional	NA|298aa|up_1|NZ_CP014274.1_2161830_2162724_+	cd07938, DRE_TIM_HMGL, 3-hydroxy-3-methylglutaryl-CoA lyase, catalytic TIM barrel domain	NA|851aa|up_0|NZ_CP014274.1_2162720_2165273_+	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase	NA|257aa|down_0|NZ_CP014274.1_2165573_2166344_+	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs	NA|189aa|down_1|NZ_CP014274.1_2166402_2166969_+	PRK04542, PRK04542, elongation factor P; Provisional	NA|376aa|down_2|NZ_CP014274.1_2167146_2168274_-	PRK13557, PRK13557, histidine kinase; Provisional	NA|626aa|down_3|NZ_CP014274.1_2168270_2170148_-	pfam13387, DUF4105, Domain of unknown function (DUF4105)	NA|100aa|down_4|NZ_CP014274.1_2170147_2170447_-	pfam09498, DUF2388, Protein of unknown function (DUF2388)	NA|383aa|down_5|NZ_CP014274.1_2173678_2174827_-	NF000247, MexA, MexA family multidrug efflux RND transporter periplasmic adaptor subunit	NA|241aa|down_6|NZ_CP014274.1_2174977_2175700_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|356aa|down_7|NZ_CP014274.1_2175699_2176767_+	PRK10549, PRK10549, two-component system sensor histidine kinase BaeS	NA|463aa|down_8|NZ_CP014274.1_2176830_2178219_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|414aa|down_9|NZ_CP014274.1_2178421_2179663_+	PRK11790, PRK11790, phosphoglycerate dehydrogenase
GCF_001562215.1_ASM156221v1	NZ_CP014274	Stenotrophomonas sp. KCTC 12332, complete genome	11	2188526-2188663	10	CRISPRCasFinder	no		DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	Orphan	GGGAGGGGTTAGCCTTTTGCGGTAATTCCTCTGCCGAGCAT	41	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	NA,NA	NA|463aa|up_9|NZ_CP014274.1_2176830_2178219_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|414aa|up_8|NZ_CP014274.1_2178421_2179663_+	PRK11790, PRK11790, phosphoglycerate dehydrogenase	NA|182aa|up_7|NZ_CP014274.1_2179963_2180509_-	cd03674, Nudix_Hydrolase_1, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|492aa|up_6|NZ_CP014274.1_2180696_2182172_+	TIGR00909, putative_amino_acid_transporter, amino acid transporter	NA|482aa|up_5|NZ_CP014274.1_2182249_2183695_+	TIGR00909, putative_amino_acid_transporter, amino acid transporter	NA|216aa|up_4|NZ_CP014274.1_2183990_2184638_+	PRK09220, PRK09220, methylthioribulose 1-phosphate dehydratase	NA|185aa|up_3|NZ_CP014274.1_2184661_2185216_+	COG1791, COG1791, Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]	NA|233aa|up_2|NZ_CP014274.1_2185362_2186061_+	cd01629, HAD_EP, Enolase-phosphatase similar to human enolase-phosphatase E1 and and Xanthomonas oryzae pv	NA|170aa|up_1|NZ_CP014274.1_2186269_2186779_+	COG1285, SapB, Uncharacterized membrane protein [Function unknown]	NA|386aa|up_0|NZ_CP014274.1_2186911_2188069_-	cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain	NA|606aa|down_0|NZ_CP014274.1_2188695_2190513_-	COG4805, COG4805, Uncharacterized protein conserved in bacteria [Function unknown]	NA|423aa|down_1|NZ_CP014274.1_2190731_2192000_+	TIGR00905, Arginine/ornithine_antiporter, transporter, basic amino acid/polyamine antiporter (APA) family	NA|213aa|down_2|NZ_CP014274.1_2192024_2192663_-	TIGR04123, hypothetical_protein, metallophosphoesterase, DNA ligase-associated	NA|830aa|down_3|NZ_CP014274.1_2192655_2195145_-	TIGR04121, ATP-dependent_helicase, DEXH box helicase, DNA ligase-associated	NA|535aa|down_4|NZ_CP014274.1_2195141_2196746_-	PRK09247, PRK09247, ATP-dependent DNA ligase; Validated	NA|332aa|down_5|NZ_CP014274.1_2196745_2197741_-	TIGR04122, hypothetical_protein, putative exonuclease, DNA ligase-associated	NA|90aa|down_6|NZ_CP014274.1_2198342_2198612_+	PRK05700, fliQ, flagellar type III secretion system protein FliQ	NA|264aa|down_7|NZ_CP014274.1_2198616_2199408_+	PRK05701, fliR, flagellar type III secretion system protein FliR	NA|707aa|down_8|NZ_CP014274.1_2199579_2201700_+	cd01948, EAL, EAL domain	NA|377aa|down_9|NZ_CP014274.1_2201887_2203018_+	PRK05702, flhB, flagellar type III secretion system protein FlhB
GCF_001562215.1_ASM156221v1	NZ_CP014274	Stenotrophomonas sp. KCTC 12332, complete genome	12	2211741-2211846	11	CRISPRCasFinder	no		DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	Orphan	GCCCTCACCCCAACCCCTCTCCCGC	25	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	NA,NA	NA|264aa|up_9|NZ_CP014274.1_2198616_2199408_+	PRK05701, fliR, flagellar type III secretion system protein FliR	NA|707aa|up_8|NZ_CP014274.1_2199579_2201700_+	cd01948, EAL, EAL domain	NA|377aa|up_7|NZ_CP014274.1_2201887_2203018_+	PRK05702, flhB, flagellar type III secretion system protein FlhB	NA|703aa|up_6|NZ_CP014274.1_2203014_2205123_+	PRK06012, flhA, flagellar type III secretion system protein FlhA	NA|599aa|up_5|NZ_CP014274.1_2205277_2207074_+	PRK12727, PRK12727, flagellar biosynthesis protein FlhF	NA|295aa|up_4|NZ_CP014274.1_2207060_2207945_+	cd02038, FlhG-like, MinD-like ATPase FlhG	NA|250aa|up_3|NZ_CP014274.1_2207941_2208691_+	PRK06986, fliA, flagellar biosynthesis sigma factor; Validated	NA|127aa|up_2|NZ_CP014274.1_2208716_2209097_+	cd19923, REC_CheY_CheY3, phosphoacceptor receiver (REC) domain of chemotaxis response regulator CheY3 and similar CheY family proteins	NA|207aa|up_1|NZ_CP014274.1_2209096_2209717_+	pfam04344, CheZ, Chemotaxis phosphatase, CheZ	NA|623aa|up_0|NZ_CP014274.1_2209720_2211589_+	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms]	NA|247aa|down_0|NZ_CP014274.1_2211913_2212654_+	PRK09109, motC, flagellar motor protein; Reviewed	NA|316aa|down_1|NZ_CP014274.1_2212657_2213605_+	PRK09038, PRK09038, flagellar motor protein MotD; Reviewed	NA|261aa|down_2|NZ_CP014274.1_2213604_2214387_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|325aa|down_3|NZ_CP014274.1_2214383_2215358_+	pfam01584, CheW, CheW-like domain	NA|103aa|down_4|NZ_CP014274.1_2215841_2216150_+	pfam13466, STAS_2, STAS domain	NA|122aa|down_5|NZ_CP014274.1_2216146_2216512_+	cd17562, REC_CheY4-like, phosphoacceptor receiver (REC) domain of chemotaxis response regulator CheY4 and similar CheY family proteins	NA|654aa|down_6|NZ_CP014274.1_2216548_2218510_+	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms]	NA|749aa|down_7|NZ_CP014274.1_2218808_2221055_+	PRK15041, PRK15041, methyl-accepting chemotaxis protein	NA|879aa|down_8|NZ_CP014274.1_2221172_2223809_+	PRK15041, PRK15041, methyl-accepting chemotaxis protein	NA|744aa|down_9|NZ_CP014274.1_2224218_2226450_+	PRK15041, PRK15041, methyl-accepting chemotaxis protein
GCF_001562215.1_ASM156221v1	NZ_CP014274	Stenotrophomonas sp. KCTC 12332, complete genome	13	2246022-2246136	12	CRISPRCasFinder	no		DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	Orphan	CAGGACTGGTGATTGCTTCTGCTTCCGG	28	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	NA|102aa|up_6|NZ_CP014274.1_2232211_2232517_+,NA	NA|251aa|up_9|NZ_CP014274.1_2229217_2229970_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|248aa|up_8|NZ_CP014274.1_2230334_2231078_+	pfam07317, YcgR, Flagellar regulator YcgR	NA|164aa|up_7|NZ_CP014274.1_2231517_2232009_+	PRK10612, PRK10612, chemotaxis protein CheW	NA|102aa|up_6|NZ_CP014274.1_2232211_2232517_+	NA	NA|794aa|up_5|NZ_CP014274.1_2232600_2234982_+	PRK15041, PRK15041, methyl-accepting chemotaxis protein	NA|722aa|up_4|NZ_CP014274.1_2235090_2237256_+	PRK15041, PRK15041, methyl-accepting chemotaxis protein	NA|282aa|up_3|NZ_CP014274.1_2237271_2238117_+	PRK10611, PRK10611, protein-glutamate O-methyltransferase CheR	NA|200aa|up_2|NZ_CP014274.1_2238113_2238713_+	PRK13487, PRK13487, chemoreceptor glutamine deamidase CheD; Provisional	NA|352aa|up_1|NZ_CP014274.1_2238709_2239765_+	PRK00742, PRK00742, chemotaxis-specific protein-glutamate methyltransferase CheB	NA|524aa|up_0|NZ_CP014274.1_2239821_2241393_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|678aa|down_0|NZ_CP014274.1_2247553_2249587_+	TIGR03375, type_I_sec_LssB, type I secretion system ATPase, LssB family	NA|414aa|down_1|NZ_CP014274.1_2249586_2250828_+	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family	NA|864aa|down_2|NZ_CP014274.1_2251523_2254115_-	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated	NA|133aa|down_3|NZ_CP014274.1_2254153_2254552_-	COG1487, VapC, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	NA|78aa|down_4|NZ_CP014274.1_2254548_2254782_-	smart00966, SpoVT_AbrB, SpoVT / AbrB like domain	NA|922aa|down_5|NZ_CP014274.1_2255062_2257828_+	PRK09277, PRK09277, aconitate hydratase AcnA	NA|151aa|down_6|NZ_CP014274.1_2258195_2258648_-	pfam14534, DUF4440, Domain of unknown function (DUF4440)	NA|561aa|down_7|NZ_CP014274.1_2258753_2260436_+	PRK08751, PRK08751, long-chain fatty acid--CoA ligase	NA|508aa|down_8|NZ_CP014274.1_2260925_2262449_-	pfam16370, MetallophosC, C terminal of Calcineurin-like phosphoesterase	NA|213aa|down_9|NZ_CP014274.1_2262702_2263341_-	PRK02759, PRK02759, bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE
GCF_001562215.1_ASM156221v1	NZ_CP014274	Stenotrophomonas sp. KCTC 12332, complete genome	14	2447402-2447473	13	CRISPRCasFinder	no		DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	Orphan	TGCCGAGCATGGCTCGGCACTAC	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	NA,NA|84aa|down_1|NZ_CP014274.1_2449278_2449530_-,NA|122aa|down_9|NZ_CP014274.1_2458261_2458627_-	NA|258aa|up_9|NZ_CP014274.1_2439335_2440109_-	PRK10871, nlpD, murein hydrolase activator NlpD	NA|205aa|up_8|NZ_CP014274.1_2440105_2440720_-	COG1238, COG1238, Predicted membrane protein [Function unknown]	NA|226aa|up_7|NZ_CP014274.1_2440739_2441417_-	PRK00312, pcm, protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA|260aa|up_6|NZ_CP014274.1_2441413_2442193_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|180aa|up_5|NZ_CP014274.1_2442374_2442914_+	COG2840, COG2840, Uncharacterized protein conserved in bacteria [Function unknown]	NA|364aa|up_4|NZ_CP014274.1_2443134_2444226_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|167aa|up_3|NZ_CP014274.1_2444222_2444723_-	pfam02542, YgbB, YgbB family	NA|232aa|up_2|NZ_CP014274.1_2444769_2445465_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|124aa|up_1|NZ_CP014274.1_2445464_2445836_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|431aa|up_0|NZ_CP014274.1_2445841_2447134_-	PRK00077, eno, enolase; Provisional	NA|555aa|down_0|NZ_CP014274.1_2447482_2449147_-	PRK05380, pyrG, CTP synthetase; Validated	NA|84aa|down_1|NZ_CP014274.1_2449278_2449530_-	NA	NA|630aa|down_2|NZ_CP014274.1_2449687_2451577_+	PRK05559, PRK05559, DNA topoisomerase IV subunit B; Reviewed	NA|374aa|down_3|NZ_CP014274.1_2451822_2452944_-	pfam01384, PHO4, Phosphate transporter family	NA|209aa|down_4|NZ_CP014274.1_2452956_2453583_-	COG1392, COG1392, Phosphate transport regulator (distant homolog of PhoU) [Inorganic ion transport and metabolism]	NA|448aa|down_5|NZ_CP014274.1_2453859_2455203_+	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|225aa|down_6|NZ_CP014274.1_2455186_2455861_+	pfam06055, ExoD, Exopolysaccharide synthesis, ExoD	NA|332aa|down_7|NZ_CP014274.1_2456131_2457127_-	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1	NA|252aa|down_8|NZ_CP014274.1_2457240_2457996_-	PRK05320, PRK05320, rhodanese superfamily protein; Provisional	NA|122aa|down_9|NZ_CP014274.1_2458261_2458627_-	NA
GCF_001562215.1_ASM156221v1	NZ_CP014274	Stenotrophomonas sp. KCTC 12332, complete genome	15	2458113-2458188	14	CRISPRCasFinder	no		DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	Orphan	CTTACCCCTCCCCAACCCTCCCCT	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	NA|84aa|up_7|NZ_CP014274.1_2449278_2449530_-,NA|122aa|down_0|NZ_CP014274.1_2458261_2458627_-,NA|96aa|down_8|NZ_CP014274.1_2466478_2466766_+	NA|431aa|up_9|NZ_CP014274.1_2445841_2447134_-	PRK00077, eno, enolase; Provisional	NA|555aa|up_8|NZ_CP014274.1_2447482_2449147_-	PRK05380, pyrG, CTP synthetase; Validated	NA|84aa|up_7|NZ_CP014274.1_2449278_2449530_-	NA	NA|630aa|up_6|NZ_CP014274.1_2449687_2451577_+	PRK05559, PRK05559, DNA topoisomerase IV subunit B; Reviewed	NA|374aa|up_5|NZ_CP014274.1_2451822_2452944_-	pfam01384, PHO4, Phosphate transporter family	NA|209aa|up_4|NZ_CP014274.1_2452956_2453583_-	COG1392, COG1392, Phosphate transport regulator (distant homolog of PhoU) [Inorganic ion transport and metabolism]	NA|448aa|up_3|NZ_CP014274.1_2453859_2455203_+	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|225aa|up_2|NZ_CP014274.1_2455186_2455861_+	pfam06055, ExoD, Exopolysaccharide synthesis, ExoD	NA|332aa|up_1|NZ_CP014274.1_2456131_2457127_-	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1	NA|252aa|up_0|NZ_CP014274.1_2457240_2457996_-	PRK05320, PRK05320, rhodanese superfamily protein; Provisional	NA|122aa|down_0|NZ_CP014274.1_2458261_2458627_-	NA	NA|144aa|down_1|NZ_CP014274.1_2458687_2459119_+	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]	NA|411aa|down_2|NZ_CP014274.1_2459102_2460335_+	TIGR03862, flavo_PP4765, uncharacterized flavoprotein, PP_4765 family	NA|541aa|down_3|NZ_CP014274.1_2460446_2462069_-	cd02808, GltS_FMN, Glutamate synthase (GltS) FMN-binding domain	NA|430aa|down_4|NZ_CP014274.1_2462100_2463390_-	COG0677, WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]	NA|145aa|down_5|NZ_CP014274.1_2463757_2464192_+	pfam04940, BLUF, Sensors of blue-light using FAD	NA|470aa|down_6|NZ_CP014274.1_2464391_2465801_-	PRK09249, PRK09249, coproporphyrinogen dehydrogenase	NA|129aa|down_7|NZ_CP014274.1_2465904_2466291_-	cd08916, TrHb3_P, Truncated hemoglobins (TrHbs, 2/2Hb, 2/2 globins); group 3 (P)	NA|96aa|down_8|NZ_CP014274.1_2466478_2466766_+	NA	NA|367aa|down_9|NZ_CP014274.1_2466753_2467854_+	TIGR02745, iron-sulfur_cluster-binding_protein, cytochrome c oxidase accessory protein FixG
GCF_001562215.1_ASM156221v1	NZ_CP014274	Stenotrophomonas sp. KCTC 12332, complete genome	16	2870843-2870937	15	CRISPRCasFinder	no		DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	Orphan	CGGCATCCTCTCCCGCAAGGGGAGAGGAAA	30	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	NA|188aa|up_9|NZ_CP014274.1_2860516_2861080_-,NA|147aa|down_8|NZ_CP014274.1_2878420_2878861_+	NA|188aa|up_9|NZ_CP014274.1_2860516_2861080_-	NA	NA|158aa|up_8|NZ_CP014274.1_2861099_2861573_+	cd08349, BLMA_like, Bleomycin binding protein (BLMA) and similar proteins	NA|787aa|up_7|NZ_CP014274.1_2862331_2864692_-	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|562aa|up_6|NZ_CP014274.1_2864820_2866506_-	cd01300, YtcJ_like, YtcJ_like metal dependent amidohydrolases	NA|242aa|up_5|NZ_CP014274.1_2866604_2867330_-	PRK11280, PRK11280, hypothetical protein; Provisional	NA|145aa|up_4|NZ_CP014274.1_2867433_2867868_-	TIGR03562, osmo_induc_OsmC, peroxiredoxin, OsmC subfamily	NA|137aa|up_3|NZ_CP014274.1_2868171_2868582_+	cd13834, HU_like, DNA-binding proteins similar to HU domains	NA|101aa|up_2|NZ_CP014274.1_2868796_2869099_+	pfam12977, DUF3861, Domain of Unknown Function with PDB structure (DUF3861)	NA|196aa|up_1|NZ_CP014274.1_2869335_2869923_+	pfam07273, DUF1439, Protein of unknown function (DUF1439)	NA|156aa|up_0|NZ_CP014274.1_2870145_2870613_-	cd10518, SET_SETD1-like, SET domain (including post-SET domain) found in SET domain-containing proteins (SETD1A/SETD1B), histone-lysine N-methyltransferases (KMT2A/KMT2B/KMT2C/KMT2D) and similar proteins	NA|149aa|down_0|NZ_CP014274.1_2871270_2871717_+	TIGR02944, conserved_hypothetical_protein, FeS assembly SUF system regulator, gammaproteobacterial	NA|492aa|down_1|NZ_CP014274.1_2871736_2873212_+	PRK11814, PRK11814, cysteine desulfurase activator complex subunit SufB; Provisional	NA|137aa|down_2|NZ_CP014274.1_2873208_2873619_+	COG3755, COG3755, Uncharacterized protein conserved in bacteria [Function unknown]	NA|255aa|down_3|NZ_CP014274.1_2873655_2874420_+	TIGR01978, Probable_ATP-dependent_transporter_SufC, FeS assembly ATPase SufC	NA|421aa|down_4|NZ_CP014274.1_2874419_2875682_+	TIGR01981, UPF0051_protein_Rv1462/MT1509, FeS assembly protein SufD	NA|419aa|down_5|NZ_CP014274.1_2875678_2876935_+	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily	NA|179aa|down_6|NZ_CP014274.1_2877327_2877864_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|111aa|down_7|NZ_CP014274.1_2877860_2878193_+	cd03528, Rieske_RO_ferredoxin, Rieske non-heme iron oxygenase (RO) family, Rieske ferredoxin component; composed of the Rieske ferredoxin component of some three-component RO systems including biphenyl dioxygenase (BPDO) and carbazole 1,9a-dioxygenase (CARDO)	NA|147aa|down_8|NZ_CP014274.1_2878420_2878861_+	NA	NA|764aa|down_9|NZ_CP014274.1_2878986_2881278_+	COG4774, Fiu, Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]
GCF_001562215.1_ASM156221v1	NZ_CP014274	Stenotrophomonas sp. KCTC 12332, complete genome	17	2891221-2891323	16	CRISPRCasFinder	no	csa3	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	Type I-A	GTAGCGCCGAGCCATGCTCGGCA	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	NA|138aa|up_6|NZ_CP014274.1_2883178_2883592_+,NA|65aa|down_9|NZ_CP014274.1_2901799_2901994_-	NA|764aa|up_9|NZ_CP014274.1_2878986_2881278_+	COG4774, Fiu, Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]	NA|236aa|up_8|NZ_CP014274.1_2881422_2882130_+	sd00010, SLR, Sel1-like repeat	NA|226aa|up_7|NZ_CP014274.1_2882151_2882829_+	PRK05467, PRK05467, Fe(II)-dependent oxygenase superfamily protein; Provisional	NA|138aa|up_6|NZ_CP014274.1_2883178_2883592_+	NA	NA|805aa|up_5|NZ_CP014274.1_2883708_2886123_+	COG4771, FepA, Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism]	NA|205aa|up_4|NZ_CP014274.1_2886464_2887079_+	pfam16357, PepSY_TM_like_2, Putative PepSY_TM-like	NA|174aa|up_3|NZ_CP014274.1_2887104_2887626_+	COG3656, COG3656, Predicted periplasmic protein [Function unknown]	NA|269aa|up_2|NZ_CP014274.1_2887651_2888458_+	pfam10670, DUF4198, Domain of unknown function (DUF4198)	NA|325aa|up_1|NZ_CP014274.1_2888636_2889611_+	COG1477, ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis [Coenzyme metabolism]	NA|537aa|up_0|NZ_CP014274.1_2889607_2891218_+	cd06200, SiR_like1, Cytochrome p450- like alpha subunits of E	NA|197aa|down_0|NZ_CP014274.1_2891418_2892009_-	pfam05962, HutD, HutD	NA|611aa|down_1|NZ_CP014274.1_2892195_2894028_-	pfam10605, 3HBOH, 3HB-oligomer hydrolase (3HBOH)	NA|266aa|down_2|NZ_CP014274.1_2894139_2894937_+	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional	NA|221aa|down_3|NZ_CP014274.1_2895134_2895797_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|144aa|down_4|NZ_CP014274.1_2895936_2896368_-	COG2391, COG2391, Predicted transporter component [General function prediction only]	NA|138aa|down_5|NZ_CP014274.1_2896364_2896778_-	COG2391, COG2391, Predicted transporter component [General function prediction only]	NA|297aa|down_6|NZ_CP014274.1_2896774_2897665_-	cd07724, POD-like_MBL-fold, ETHE1 (PDO type I), persulfide dioxygenase A (PDOA, PDO type II) and related proteins; MBL-fold metallo-hydrolase domain	csa3|107aa|down_7|NZ_CP014274.1_2897746_2898067_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|1120aa|down_8|NZ_CP014274.1_2898190_2901550_-	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|65aa|down_9|NZ_CP014274.1_2901799_2901994_-	NA
GCF_001562215.1_ASM156221v1	NZ_CP014274	Stenotrophomonas sp. KCTC 12332, complete genome	18	3692718-3692814	17	CRISPRCasFinder	no		DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	Orphan	AAAGCCCCTCTCCCTCCGGGAGAGGGGTTGGGGTG	35	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	NA,NA|372aa|down_2|NZ_CP014274.1_3695023_3696139_-,NA|158aa|down_3|NZ_CP014274.1_3696073_3696547_+	NA|943aa|up_9|NZ_CP014274.1_3683091_3685920_+	PRK12648, PRK12648, putative monovalent cation/H+ antiporter subunit A; Reviewed	NA|127aa|up_8|NZ_CP014274.1_3685919_3686300_+	PRK09094, PRK09094, putative monovalent cation/H+ antiporter subunit C; Reviewed	NA|517aa|up_7|NZ_CP014274.1_3686296_3687847_+	PRK12666, PRK12666, putative monovalent cation/H+ antiporter subunit D; Reviewed	NA|169aa|up_6|NZ_CP014274.1_3687843_3688350_+	PRK08965, PRK08965, putative monovalent cation/H+ antiporter subunit E; Reviewed	NA|95aa|up_5|NZ_CP014274.1_3688346_3688631_+	PRK06161, PRK06161, putative monovalent cation/H+ antiporter subunit F; Reviewed	NA|112aa|up_4|NZ_CP014274.1_3688627_3688963_+	PRK12674, PRK12674, putative monovalent cation/H+ antiporter subunit G; Reviewed	NA|318aa|up_3|NZ_CP014274.1_3689069_3690023_-	TIGR00367, Uncharacterized_membrane_protein_MJ0091, K+-dependent Na+/Ca+ exchanger related-protein	NA|200aa|up_2|NZ_CP014274.1_3690100_3690700_-	PRK00249, flgH, flagellar basal body L-ring protein FlgH	NA|187aa|up_1|NZ_CP014274.1_3690829_3691390_+	PRK08724, fliD, flagellar filament capping protein FliD	NA|433aa|up_0|NZ_CP014274.1_3691391_3692690_-	PRK05341, PRK05341, homogentisate 1,2-dioxygenase; Provisional	NA|357aa|down_0|NZ_CP014274.1_3693277_3694348_-	COG3185, COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]	NA|165aa|down_1|NZ_CP014274.1_3694515_3695010_+	COG1846, MarR, Transcriptional regulators [Transcription]	NA|372aa|down_2|NZ_CP014274.1_3695023_3696139_-	NA	NA|158aa|down_3|NZ_CP014274.1_3696073_3696547_+	NA	NA|198aa|down_4|NZ_CP014274.1_3696461_3697055_-	pfam13899, Thioredoxin_7, Thioredoxin-like	NA|503aa|down_5|NZ_CP014274.1_3697065_3698574_-	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism]	NA|287aa|down_6|NZ_CP014274.1_3698780_3699641_-	TIGR03036, trp_2_3_diox, tryptophan 2,3-dioxygenase	NA|363aa|down_7|NZ_CP014274.1_3700446_3701535_+	TIGR03181, PDH_E1_alph_x, pyruvate dehydrogenase E1 component, alpha subunit	NA|360aa|down_8|NZ_CP014274.1_3701527_3702607_+	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|118aa|down_9|NZ_CP014274.1_3702608_3702962_+	cd11855, SH3_Sho1p, Src homology 3 domain of High osmolarity signaling protein Sho1p
GCF_001562215.1_ASM156221v1	NZ_CP014274	Stenotrophomonas sp. KCTC 12332, complete genome	19	3814883-3814966	18	CRISPRCasFinder	no		DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	Orphan	GCCCCTGCCGAGCATGGCTCGGCACTAC	28	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	NA,NA|98aa|down_9|NZ_CP014274.1_3827753_3828047_-	NA|245aa|up_9|NZ_CP014274.1_3802274_3803009_-	cd06662, SURF1, SURF1 superfamily	NA|73aa|up_8|NZ_CP014274.1_3803066_3803285_+	pfam11137, DUF2909, Protein of unknown function (DUF2909)	NA|292aa|up_7|NZ_CP014274.1_3803331_3804207_-	cd01665, Cyt_c_Oxidase_III, Cytochrome c oxidase subunit III	NA|199aa|up_6|NZ_CP014274.1_3804229_3804826_-	PRK05089, PRK05089, cytochrome C oxidase assembly protein; Provisional	NA|537aa|up_5|NZ_CP014274.1_3804971_3806582_-	cd01663, Cyt_c_Oxidase_I, Cytochrome C oxidase subunit I	NA|314aa|up_4|NZ_CP014274.1_3806644_3807586_-	cd13912, CcO_II_C, C-terminal domain of Cytochrome c Oxidase subunit II	NA|158aa|up_3|NZ_CP014274.1_3807603_3808077_-	pfam10003, DUF2244, Integral membrane protein (DUF2244)	NA|1073aa|up_2|NZ_CP014274.1_3808367_3811586_+	PRK11904, PRK11904, bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA	NA|483aa|up_1|NZ_CP014274.1_3812422_3813871_-	pfam03349, Toluene_X, Outer membrane protein transport protein (OMPP1/FadL/TodX)	NA|231aa|up_0|NZ_CP014274.1_3814072_3814765_+	pfam01694, Rhomboid, Rhomboid family	NA|448aa|down_0|NZ_CP014274.1_3816533_3817877_-	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	NA|218aa|down_1|NZ_CP014274.1_3817923_3818577_+	COG3595, COG3595, Uncharacterized conserved protein [Function unknown]	NA|570aa|down_2|NZ_CP014274.1_3818638_3820348_+	cd05660, M28_like_PA, M28 Zn-peptidase containing a protease-associated (PA) domain insert	NA|124aa|down_3|NZ_CP014274.1_3820654_3821026_+	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|304aa|down_4|NZ_CP014274.1_3821150_3822062_-	COG2962, RarD, Predicted permeases [General function prediction only]	NA|301aa|down_5|NZ_CP014274.1_3822058_3822961_-	PRK11272, PRK11272, putative DMT superfamily transporter inner membrane protein; Provisional	NA|445aa|down_6|NZ_CP014274.1_3823159_3824494_+	cd17367, MFS_KgtP, Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters	NA|551aa|down_7|NZ_CP014274.1_3824633_3826286_-	cd05660, M28_like_PA, M28 Zn-peptidase containing a protease-associated (PA) domain insert	NA|311aa|down_8|NZ_CP014274.1_3826735_3827668_-	cd07726, ST1585-like_MBL-fold, uncharacterized subgroup which includes Sulfolobus tokodaii ST1585 protein; MBL-fold metallo hydrolase domain	NA|98aa|down_9|NZ_CP014274.1_3827753_3828047_-	NA
GCF_001562215.1_ASM156221v1	NZ_CP014274	Stenotrophomonas sp. KCTC 12332, complete genome	20	3988728-3988860	19	CRISPRCasFinder	no		DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	Orphan	GGGAGAGGGGTTGGGGTGAGGGCAGCTTTGGCCGGTAAAGCCCCT	45	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	NA|128aa|up_8|NZ_CP014274.1_3980938_3981322_-,NA	NA|427aa|up_9|NZ_CP014274.1_3979605_3980886_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|128aa|up_8|NZ_CP014274.1_3980938_3981322_-	NA	NA|595aa|up_7|NZ_CP014274.1_3981650_3983435_-	COG4805, COG4805, Uncharacterized protein conserved in bacteria [Function unknown]	NA|112aa|up_6|NZ_CP014274.1_3983544_3983880_-	COG3952, COG3952, Predicted membrane protein [Function unknown]	NA|241aa|up_5|NZ_CP014274.1_3983882_3984605_-	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1	NA|322aa|up_4|NZ_CP014274.1_3984677_3985643_-	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs	NA|244aa|up_3|NZ_CP014274.1_3985639_3986371_-	pfam05076, SUFU, Suppressor of fused protein (SUFU)	NA|103aa|up_2|NZ_CP014274.1_3986410_3986719_-	pfam11731, Cdd1, Pathogenicity locus	NA|305aa|up_1|NZ_CP014274.1_3986753_3987668_-	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein	NA|266aa|up_0|NZ_CP014274.1_3987667_3988465_-	pfam13614, AAA_31, AAA domain	NA|213aa|down_0|NZ_CP014274.1_3988895_3989534_-	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA|197aa|down_1|NZ_CP014274.1_3989648_3990239_-	COG2091, Sfp, Phosphopantetheinyl transferase [Coenzyme metabolism]	NA|85aa|down_2|NZ_CP014274.1_3990341_3990596_+	COG2261, COG2261, Predicted membrane protein [Function unknown]	NA|258aa|down_3|NZ_CP014274.1_3990652_3991426_-	cd09086, ExoIII-like_AP-endo, Escherichia coli exonuclease III (ExoIII) and Neisseria meningitides NExo-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases	NA|1161aa|down_4|NZ_CP014274.1_3991742_3995225_+	PRK11448, hsdR, type I restriction enzyme EcoKI subunit R; Provisional	NA|396aa|down_5|NZ_CP014274.1_3995315_3996503_+	COG3177, COG3177, Fic family protein [Function unknown]	NA|517aa|down_6|NZ_CP014274.1_3996499_3998050_+	pfam02384, N6_Mtase, N-6 DNA Methylase	NA|445aa|down_7|NZ_CP014274.1_3998046_3999381_+	PRK09737, PRK09737, type I restriction-modification system specificity subunit	NA|604aa|down_8|NZ_CP014274.1_3999410_4001222_+	COG3472, COG3472, Uncharacterized conserved protein [Function unknown]	NA|636aa|down_9|NZ_CP014274.1_4001306_4003214_+	PRK10236, PRK10236, acidic protein MsyB
GCF_001562215.1_ASM156221v1	NZ_CP014274	Stenotrophomonas sp. KCTC 12332, complete genome	21	4027840-4027926	20	CRISPRCasFinder	no		DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	Orphan	CAGCTCTCTCTGGTTCCTATTTTCCTG	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	NA,NA	NA|314aa|up_9|NZ_CP014274.1_4012503_4013445_+	cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP	NA|730aa|up_8|NZ_CP014274.1_4013481_4015671_+	COG1262, COG1262, Uncharacterized conserved protein [Function unknown]	NA|619aa|up_7|NZ_CP014274.1_4015667_4017524_+	pfam07944, Glyco_hydro_127, Beta-L-arabinofuranosidase, GH127	NA|398aa|up_6|NZ_CP014274.1_4017688_4018882_+	pfam02515, CoA_transf_3, CoA-transferase family III	NA|322aa|up_5|NZ_CP014274.1_4018892_4019858_+	PRK05269, PRK05269, transaldolase B; Provisional	NA|472aa|up_4|NZ_CP014274.1_4020164_4021580_-	cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like	NA|574aa|up_3|NZ_CP014274.1_4021893_4023615_-	PRK09395, actP, cation/acetate symporter ActP	NA|106aa|up_2|NZ_CP014274.1_4023611_4023929_-	pfam04341, DUF485, Protein of unknown function, DUF485	NA|478aa|up_1|NZ_CP014274.1_4024081_4025515_-	PHA01819, PHA01819, hypothetical protein	NA|648aa|up_0|NZ_CP014274.1_4025753_4027697_+	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|222aa|down_0|NZ_CP014274.1_4027944_4028610_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|203aa|down_1|NZ_CP014274.1_4029372_4029981_+	COG1971, COG1971, Predicted membrane protein [Function unknown]	NA|1147aa|down_2|NZ_CP014274.1_4030661_4034102_-	cd10322, SLC5sbd, Solute carrier 5 family, sodium/glucose transporters and related proteins; solute-binding domain	NA|456aa|down_3|NZ_CP014274.1_4034597_4035965_-	PRK10808, PRK10808, outer membrane protein A; Reviewed	NA|3013aa|down_4|NZ_CP014274.1_4039004_4048043_-	NF012181, MSCRAMM_SdrD, MSCRAMM family adhesin SdrD	NA|247aa|down_5|NZ_CP014274.1_4048374_4049115_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|716aa|down_6|NZ_CP014274.1_4049261_4051409_-	pfam10459, Peptidase_S46, Peptidase S46	NA|1271aa|down_7|NZ_CP014274.1_4051680_4055493_-	COG2911, COG2911, Uncharacterized protein conserved in bacteria [Function unknown]	NA|600aa|down_8|NZ_CP014274.1_4055537_4057337_-	COG0729, COG0729, Outer membrane protein [Cell envelope biogenesis, outer membrane]	NA|925aa|down_9|NZ_CP014274.1_4057916_4060691_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel
GCF_001562215.1_ASM156221v1	NZ_CP014274	Stenotrophomonas sp. KCTC 12332, complete genome	22	4083418-4083524	21	CRISPRCasFinder	no		DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	Orphan	TGCACTTGGCAGCTGTTCCGATGCCTGCAGC	31	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	NA,NA	NA|335aa|up_9|NZ_CP014274.1_4069808_4070813_-	COG3706, PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms]	NA|188aa|up_8|NZ_CP014274.1_4070803_4071367_-	cd16433, CheB, Chemotaxis response regulator protein-glutamate methylesterase, CheB	NA|289aa|up_7|NZ_CP014274.1_4071381_4072248_-	COG1352, CheR, Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms]	NA|1201aa|up_6|NZ_CP014274.1_4072232_4075835_-	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|249aa|up_5|NZ_CP014274.1_4075932_4076679_-	PRK10921, PRK10921, Sec-independent protein translocase subunit TatC	NA|76aa|up_4|NZ_CP014274.1_4077200_4077428_-	PRK04561, tatA, twin arginine translocase protein A; Provisional	NA|303aa|up_3|NZ_CP014274.1_4077502_4078411_-	cd11524, SYLF, The SYLF domain (also called DUF500), a novel lipid-binding module	NA|321aa|up_2|NZ_CP014274.1_4078643_4079606_+	PRK00035, hemH, ferrochelatase; Reviewed	NA|288aa|up_1|NZ_CP014274.1_4079602_4080466_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|525aa|up_0|NZ_CP014274.1_4081596_4083171_+	PRK15041, PRK15041, methyl-accepting chemotaxis protein	NA|264aa|down_0|NZ_CP014274.1_4083890_4084682_-	pfam01863, DUF45, Protein of unknown function DUF45	NA|303aa|down_1|NZ_CP014274.1_4084735_4085644_-	PRK00321, rdgC, recombination associated protein; Reviewed	NA|310aa|down_2|NZ_CP014274.1_4085785_4086715_-	PRK10696, PRK10696, tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional	NA|65aa|down_3|NZ_CP014274.1_4086790_4086985_+	pfam04325, DUF465, Protein of unknown function (DUF465)	NA|877aa|down_4|NZ_CP014274.1_4087565_4090196_-	PRK04974, PRK04974, glycerol-3-phosphate 1-O-acyltransferase PlsB	NA|240aa|down_5|NZ_CP014274.1_4091487_4092207_-	PRK00230, PRK00230, orotidine-5'-phosphate decarboxylase	NA|301aa|down_6|NZ_CP014274.1_4092203_4093106_-	cd07534, HAD_CAP, molecular class C acid phosphatases, similar to Haemophilus influenzae e (P4) acid phosphatase; belongs to the haloacid dehalogenase-like hydrolase superfamily	NA|222aa|down_7|NZ_CP014274.1_4093296_4093962_+	pfam04337, DUF480, Protein of unknown function, DUF480	NA|174aa|down_8|NZ_CP014274.1_4094087_4094609_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|662aa|down_9|NZ_CP014274.1_4094849_4096835_-	TIGR01074, ATP-dependent_DNA_helicase_Rep, ATP-dependent DNA helicase Rep
GCF_001562215.1_ASM156221v1	NZ_CP014274	Stenotrophomonas sp. KCTC 12332, complete genome	23	4099632-4099733	22	CRISPRCasFinder	no		DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	Orphan	GGGGCAAAAGCGGCACTGCTGCGATCTG	28	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	NA,NA|292aa|down_5|NZ_CP014274.1_4104669_4105545_-	NA|310aa|up_9|NZ_CP014274.1_4085785_4086715_-	PRK10696, PRK10696, tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional	NA|65aa|up_8|NZ_CP014274.1_4086790_4086985_+	pfam04325, DUF465, Protein of unknown function (DUF465)	NA|877aa|up_7|NZ_CP014274.1_4087565_4090196_-	PRK04974, PRK04974, glycerol-3-phosphate 1-O-acyltransferase PlsB	NA|240aa|up_6|NZ_CP014274.1_4091487_4092207_-	PRK00230, PRK00230, orotidine-5'-phosphate decarboxylase	NA|301aa|up_5|NZ_CP014274.1_4092203_4093106_-	cd07534, HAD_CAP, molecular class C acid phosphatases, similar to Haemophilus influenzae e (P4) acid phosphatase; belongs to the haloacid dehalogenase-like hydrolase superfamily	NA|222aa|up_4|NZ_CP014274.1_4093296_4093962_+	pfam04337, DUF480, Protein of unknown function, DUF480	NA|174aa|up_3|NZ_CP014274.1_4094087_4094609_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|662aa|up_2|NZ_CP014274.1_4094849_4096835_-	TIGR01074, ATP-dependent_DNA_helicase_Rep, ATP-dependent DNA helicase Rep	NA|207aa|up_1|NZ_CP014274.1_4096958_4097579_+	PRK04296, PRK04296, thymidine kinase; Provisional	NA|535aa|up_0|NZ_CP014274.1_4097786_4099391_-	PRK13273, mdoD, glucan biosynthesis protein D; Provisional	NA|271aa|down_0|NZ_CP014274.1_4099824_4100637_-	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA|110aa|down_1|NZ_CP014274.1_4100953_4101283_-	pfam13499, EF-hand_7, EF-hand domain pair	NA|401aa|down_2|NZ_CP014274.1_4101279_4102482_-	COG1398, OLE1, Fatty-acid desaturase [Lipid metabolism]	NA|275aa|down_3|NZ_CP014274.1_4102609_4103434_+	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|395aa|down_4|NZ_CP014274.1_4103473_4104658_-	pfam16024, DUF4785, Domain of unknown function (DUF4785)	NA|292aa|down_5|NZ_CP014274.1_4104669_4105545_-	NA	NA|279aa|down_6|NZ_CP014274.1_4105838_4106675_+	cd03397, PAP2_acid_phosphatase, PAP2, bacterial acid phosphatase or class A non-specific acid phosphatases	NA|395aa|down_7|NZ_CP014274.1_4106947_4108132_+	smart00636, Glyco_18, Glyco_18 domain	NA|777aa|down_8|NZ_CP014274.1_4108257_4110588_-	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|338aa|down_9|NZ_CP014274.1_4110757_4111771_+	pfam01987, AIM24, Mitochondrial biogenesis AIM24
GCF_001562215.1_ASM156221v1	NZ_CP014274	Stenotrophomonas sp. KCTC 12332, complete genome	24	4357476-4357579	23	CRISPRCasFinder	no		DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	Orphan	TGTAGTGCCGAGCCATGCTCGGCAA	25	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	NA,NA|74aa|down_5|NZ_CP014274.1_4363484_4363706_-	NA|211aa|up_9|NZ_CP014274.1_4345466_4346099_+	cd02042, ParAB_family, partition proteins ParAB family	NA|159aa|up_8|NZ_CP014274.1_4346117_4346594_+	COG2062, SixA, Phosphohistidine phosphatase SixA [Signal transduction mechanisms]	NA|190aa|up_7|NZ_CP014274.1_4346598_4347168_+	COG2353, COG2353, Uncharacterized conserved protein [Function unknown]	NA|662aa|up_6|NZ_CP014274.1_4347164_4349150_+	cd09111, PLDc_ymdC_like_1, Putative catalytic domain, repeat 1, of Escherichia coli uncharacterized protein ymdC and similar proteins	NA|143aa|up_5|NZ_CP014274.1_4349179_4349608_+	PRK10293, PRK10293, 1,4-dihydroxy-2-naphthoyl-CoA hydrolase	NA|846aa|up_4|NZ_CP014274.1_4350094_4352632_-	PRK11359, PRK11359, cyclic-di-GMP phosphodiesterase; Provisional	NA|264aa|up_3|NZ_CP014274.1_4352877_4353669_+	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|330aa|up_2|NZ_CP014274.1_4353723_4354713_+	COG0429, COG0429, Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]	NA|690aa|up_1|NZ_CP014274.1_4354770_4356840_+	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|204aa|up_0|NZ_CP014274.1_4356853_4357465_+	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea	NA|270aa|down_0|NZ_CP014274.1_4357722_4358532_-	pfam14302, DUF4377, Domain of unknown function (DUF4377)	NA|265aa|down_1|NZ_CP014274.1_4358615_4359410_-	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase	NA|470aa|down_2|NZ_CP014274.1_4359623_4361033_+	PRK09469, glnA, glutamate--ammonia ligase	NA|113aa|down_3|NZ_CP014274.1_4361397_4361736_+	COG0347, GlnK, Nitrogen regulatory protein PII [Amino acid transport and metabolism]	NA|472aa|down_4|NZ_CP014274.1_4361824_4363240_+	PRK10666, PRK10666, ammonium transporter AmtB	NA|74aa|down_5|NZ_CP014274.1_4363484_4363706_-	NA	NA|249aa|down_6|NZ_CP014274.1_4363943_4364690_+	COG3023, ampD, N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]	NA|352aa|down_7|NZ_CP014274.1_4364718_4365774_+	COG3852, NtrB, Signal transduction histidine kinase, nitrogen specific [Signal transduction mechanisms]	NA|479aa|down_8|NZ_CP014274.1_4365766_4367203_+	TIGR01818, Nitrogen_assimilation_regulatory_protein, nitrogen regulation protein NR(I)	NA|828aa|down_9|NZ_CP014274.1_4367406_4369890_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins
GCF_001562215.1_ASM156221v1	NZ_CP014274	Stenotrophomonas sp. KCTC 12332, complete genome	25	4363350-4363490	24	CRISPRCasFinder	no		DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	Orphan	TTACCGGGAAAGCCCCTGCCGAGCATGGCTCGGCACTACAG	41	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,PD-DExK,WYL	NA,NA|296aa|down_6|NZ_CP014274.1_4371634_4372522_-,NA|312aa|down_8|NZ_CP014274.1_4374051_4374987_+,NA|186aa|down_9|NZ_CP014274.1_4375129_4375687_+	NA|846aa|up_9|NZ_CP014274.1_4350094_4352632_-	PRK11359, PRK11359, cyclic-di-GMP phosphodiesterase; Provisional	NA|264aa|up_8|NZ_CP014274.1_4352877_4353669_+	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|330aa|up_7|NZ_CP014274.1_4353723_4354713_+	COG0429, COG0429, Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]	NA|690aa|up_6|NZ_CP014274.1_4354770_4356840_+	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|204aa|up_5|NZ_CP014274.1_4356853_4357465_+	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea	NA|270aa|up_4|NZ_CP014274.1_4357722_4358532_-	pfam14302, DUF4377, Domain of unknown function (DUF4377)	NA|265aa|up_3|NZ_CP014274.1_4358615_4359410_-	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase	NA|470aa|up_2|NZ_CP014274.1_4359623_4361033_+	PRK09469, glnA, glutamate--ammonia ligase	NA|113aa|up_1|NZ_CP014274.1_4361397_4361736_+	COG0347, GlnK, Nitrogen regulatory protein PII [Amino acid transport and metabolism]	NA|472aa|up_0|NZ_CP014274.1_4361824_4363240_+	PRK10666, PRK10666, ammonium transporter AmtB	NA|249aa|down_0|NZ_CP014274.1_4363943_4364690_+	COG3023, ampD, N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]	NA|352aa|down_1|NZ_CP014274.1_4364718_4365774_+	COG3852, NtrB, Signal transduction histidine kinase, nitrogen specific [Signal transduction mechanisms]	NA|479aa|down_2|NZ_CP014274.1_4365766_4367203_+	TIGR01818, Nitrogen_assimilation_regulatory_protein, nitrogen regulation protein NR(I)	NA|828aa|down_3|NZ_CP014274.1_4367406_4369890_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|191aa|down_4|NZ_CP014274.1_4370008_4370581_+	pfam00080, Sod_Cu, Copper/zinc superoxide dismutase (SODC)	NA|205aa|down_5|NZ_CP014274.1_4370626_4371241_+	pfam00080, Sod_Cu, Copper/zinc superoxide dismutase (SODC)	NA|296aa|down_6|NZ_CP014274.1_4371634_4372522_-	NA	NA|432aa|down_7|NZ_CP014274.1_4372612_4373908_+	PRK09268, PRK09268, acetyl-CoA C-acetyltransferase	NA|312aa|down_8|NZ_CP014274.1_4374051_4374987_+	NA	NA|186aa|down_9|NZ_CP014274.1_4375129_4375687_+	NA
