assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001560895.1_ASM156089v1	NZ_CP014326	Streptococcus mitis strain SVGS_061 chromosome, complete genome	1	1089783-1089862	1	CRISPRCasFinder	no		cas3,DEDDh,DinG	Orphan	GGGCCAAGCGGTGGCGGACACCAGAA	26	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG	NA|78aa|up_9|NZ_CP014326.1_1079193_1079427_+,NA|100aa|up_7|NZ_CP014326.1_1080350_1080650_+,NA|163aa|up_6|NZ_CP014326.1_1080639_1081128_+,NA|81aa|up_4|NZ_CP014326.1_1083025_1083268_+,NA|285aa|up_3|NZ_CP014326.1_1083284_1084139_+,NA|57aa|down_6|NZ_CP014326.1_1094332_1094503_+,NA|100aa|down_9|NZ_CP014326.1_1097806_1098106_-	NA|78aa|up_9|NZ_CP014326.1_1079193_1079427_+	NA	NA|196aa|up_8|NZ_CP014326.1_1079429_1080017_+	pfam02517, Abi, CAAX protease self-immunity	NA|100aa|up_7|NZ_CP014326.1_1080350_1080650_+	NA	NA|163aa|up_6|NZ_CP014326.1_1080639_1081128_+	NA	NA|626aa|up_5|NZ_CP014326.1_1081127_1083005_+	pfam02534, T4SS-DNA_transf, Type IV secretory system Conjugative DNA transfer	NA|81aa|up_4|NZ_CP014326.1_1083025_1083268_+	NA	NA|285aa|up_3|NZ_CP014326.1_1083284_1084139_+	NA	NA|120aa|up_2|NZ_CP014326.1_1084192_1084552_+	pfam12666, PrgI, PrgI family protein	NA|772aa|up_1|NZ_CP014326.1_1084544_1086860_+	TIGR02746, hypothetical_protein, type-IV secretion system protein TraC	NA|938aa|up_0|NZ_CP014326.1_1086871_1089685_+	pfam18013, Phage_lysozyme2, Phage tail lysozyme	NA|406aa|down_0|NZ_CP014326.1_1090089_1091307_-	pfam00589, Phage_integrase, Phage integrase family	NA|68aa|down_1|NZ_CP014326.1_1091388_1091592_-	pfam09035, Tn916-Xis, Excisionase from transposon Tn916	NA|77aa|down_2|NZ_CP014326.1_1092052_1092283_-	pfam12645, HTH_16, Helix-turn-helix domain	NA|141aa|down_3|NZ_CP014326.1_1092279_1092702_-	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|118aa|down_4|NZ_CP014326.1_1093206_1093560_+	pfam18430, DBD_HTH, Putative DNA-binding domain	NA|64aa|down_5|NZ_CP014326.1_1093619_1093811_-	pfam14205, Cys_rich_KTR, Cysteine-rich KTR	NA|57aa|down_6|NZ_CP014326.1_1094332_1094503_+	NA	NA|406aa|down_7|NZ_CP014326.1_1094888_1096106_+	TIGR00900, multidrug_transporter, H+ Antiporter protein	NA|488aa|down_8|NZ_CP014326.1_1096225_1097689_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|100aa|down_9|NZ_CP014326.1_1097806_1098106_-	NA
GCF_001560895.1_ASM156089v1	NZ_CP014326	Streptococcus mitis strain SVGS_061 chromosome, complete genome	2	1558602-1558698	2	CRISPRCasFinder	no		cas3,DEDDh,DinG	Orphan	TGAAAAAAGACCCAACCGGGTCTT	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG	NA,NA	NA|171aa|up_9|NZ_CP014326.1_1548353_1548866_-	pfam05708, Peptidase_C92, Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family	NA|312aa|up_8|NZ_CP014326.1_1548952_1549888_-	PRK05427, PRK05427, putative manganese-dependent inorganic pyrophosphatase; Provisional	NA|410aa|up_7|NZ_CP014326.1_1550127_1551357_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|778aa|up_6|NZ_CP014326.1_1551334_1553668_-	pfam00899, ThiF, ThiF family	NA|292aa|up_5|NZ_CP014326.1_1554044_1554920_-	TIGR01716, HTH-type_transcriptional_regulator_rgg, transcriptional activator, Rgg/GadR/MutR family, C-terminal domain	NA|91aa|up_4|NZ_CP014326.1_1555117_1555390_-	cd10456, GIY-YIG_UPF0213, The GIY-YIG domain of uncharacterized protein family UPF0213 related to structure-specific endonuclease SLX1	NA|250aa|up_3|NZ_CP014326.1_1555379_1556129_-	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only]	NA|121aa|up_2|NZ_CP014326.1_1556181_1556544_-	PRK07252, PRK07252, S1 RNA-binding domain-containing protein	NA|467aa|up_1|NZ_CP014326.1_1556545_1557946_-	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones]	NA|168aa|up_0|NZ_CP014326.1_1558027_1558531_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|80aa|down_0|NZ_CP014326.1_1558702_1558942_-	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed	NA|157aa|down_1|NZ_CP014326.1_1558973_1559444_-	PRK07275, PRK07275, single-stranded DNA-binding protein; Provisional	NA|97aa|down_2|NZ_CP014326.1_1559455_1559746_-	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed	NA|449aa|down_3|NZ_CP014326.1_1559897_1561244_-	PRK03932, asnC, asparaginyl-tRNA synthetase; Validated	NA|393aa|down_4|NZ_CP014326.1_1561257_1562436_-	PRK05764, PRK05764, aspartate aminotransferase; Provisional	NA|163aa|down_5|NZ_CP014326.1_1562432_1562921_-	COG5353, COG5353, Uncharacterized protein conserved in bacteria [Function unknown]	NA|399aa|down_6|NZ_CP014326.1_1563108_1564305_-	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|183aa|down_7|NZ_CP014326.1_1564692_1565241_+	COG0431, COG0431, Predicted flavoprotein [General function prediction only]	NA|2409aa|down_8|NZ_CP014326.1_1565886_1573113_-	COG3250, LacZ, Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]	NA|2767aa|down_9|NZ_CP014326.1_1573469_1581770_-	cd06564, GH20_DspB_LnbB-like, Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins
GCF_001560895.1_ASM156089v1	NZ_CP014326	Streptococcus mitis strain SVGS_061 chromosome, complete genome	3	1737070-1745691	1	CRT	no		cas3,DEDDh,DinG	Orphan	TGTNNNTGCTGANTCNGA	18	9	14	1742764-1742793|1742908-1742937|1743460-1743489|1743556-1743585|1743964-1743993|1744660-1744689|1744924-1744953|1744924-1744953|1744924-1744953|1744972-1745001|1745020-1745037|1745020-1745037|1745020-1745037|1745020-1745037	NZ_CP014326.1_1737040-1737069|NZ_CP014326.1_1737040-1737069|NZ_CP014326.1_1737040-1737069|NZ_CP014326.1_1737040-1737069|NZ_CP014326.1_1737040-1737069|NZ_CP014326.1_1737040-1737069|NZ_CP014326.1_1736944-1736973|NZ_CP014326.1_1736992-1737021|NZ_CP014326.1_1737064-1737093|NZ_CP014326.1_1737016-1737045|NZ_CP014326.1_1745980-1745997|NZ_CP014326.1_1746028-1746045|NZ_CP014326.1_1745788-1745805|NZ_CP014326.1_1745884-1745901	NA	99	99	Orphan	cas3,DEDDh,DinG	NA,NA	NA|398aa|up_9|NZ_CP014326.1_1721932_1723126_-	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|416aa|up_8|NZ_CP014326.1_1723104_1724352_-	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|813aa|up_7|NZ_CP014326.1_1724381_1726820_-	TIGR03728, glyco_access_1, glycosyltransferase, SP_1767 family	NA|337aa|up_6|NZ_CP014326.1_1726829_1727840_-	PRK09814, PRK09814, sugar transferase	NA|404aa|up_5|NZ_CP014326.1_1728079_1729291_-	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|407aa|up_4|NZ_CP014326.1_1729303_1730524_-	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|289aa|up_3|NZ_CP014326.1_1731187_1732054_-	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|698aa|up_2|NZ_CP014326.1_1732043_1734137_-	COG1442, RfaJ, Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]	NA|295aa|up_1|NZ_CP014326.1_1734615_1735500_-	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|128aa|up_0|NZ_CP014326.1_1735616_1736000_-	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others	NA|515aa|down_0|NZ_CP014326.1_1750838_1752383_-	PRK00741, prfC, peptide chain release factor 3; Provisional	NA|50aa|down_1|NZ_CP014326.1_1752681_1752831_-	pfam16935, Hol_Tox, Putative Holin-like Toxin (Hol-Tox)	NA|101aa|down_2|NZ_CP014326.1_1753157_1753460_+	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA|489aa|down_3|NZ_CP014326.1_1753459_1754926_+	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA|481aa|down_4|NZ_CP014326.1_1754925_1756368_+	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA|187aa|down_5|NZ_CP014326.1_1756499_1757060_+	PRK00529, PRK00529, elongation factor P; Validated	NA|130aa|down_6|NZ_CP014326.1_1757081_1757471_+	COG1302, COG1302, Uncharacterized protein conserved in bacteria [Function unknown]	NA|142aa|down_7|NZ_CP014326.1_1757463_1757889_+	PRK00202, nusB, transcription antitermination factor NusB	NA|256aa|down_8|NZ_CP014326.1_1758195_1758963_-	PRK12319, PRK12319, acetyl-CoA carboxylase subunit alpha; Provisional	NA|289aa|down_9|NZ_CP014326.1_1758959_1759826_-	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta
GCF_001560895.1_ASM156089v1	NZ_CP014326	Streptococcus mitis strain SVGS_061 chromosome, complete genome	4	1928965-1929051	3	CRISPRCasFinder	no		cas3,DEDDh,DinG	Orphan	AATGGTGATATGAAGACTGGTTGG	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG	NA|207aa|up_2|NZ_CP014326.1_1924101_1924722_-,NA|57aa|up_0|NZ_CP014326.1_1926081_1926252_+,NA	NA|239aa|up_9|NZ_CP014326.1_1917180_1917897_-	PRK12378, PRK12378, YebC/PmpR family DNA-binding transcriptional regulator	NA|457aa|up_8|NZ_CP014326.1_1917993_1919364_-	cd13138, MATE_yoeA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Bacillus subtilis yoeA	NA|389aa|up_7|NZ_CP014326.1_1919478_1920645_-	PRK09354, recA, recombinase A; Provisional	NA|423aa|up_6|NZ_CP014326.1_1920687_1921956_-	PRK00549, PRK00549, competence damage-inducible protein A; Provisional	NA|339aa|up_5|NZ_CP014326.1_1922041_1923058_-	COG1316, LytR, Transcriptional regulator [Transcription]	NA|173aa|up_4|NZ_CP014326.1_1923065_1923584_-	PRK10140, PRK10140, N-acetyltransferase	NA|148aa|up_3|NZ_CP014326.1_1923573_1924017_-	COG0802, COG0802, Predicted ATPase or kinase [General function prediction only]	NA|207aa|up_2|NZ_CP014326.1_1924101_1924722_-	NA	NA|288aa|up_1|NZ_CP014326.1_1925026_1925890_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|57aa|up_0|NZ_CP014326.1_1926081_1926252_+	NA	NA|332aa|down_0|NZ_CP014326.1_1929183_1930179_+	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|138aa|down_1|NZ_CP014326.1_1930520_1930934_-	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|1226aa|down_2|NZ_CP014326.1_1931043_1934721_-	PRK00566, PRK00566, DNA-directed RNA polymerase subunit beta'; Provisional	NA|1202aa|down_3|NZ_CP014326.1_1934759_1938365_-	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed	NA|495aa|down_4|NZ_CP014326.1_1938846_1940331_+	pfam08270, PRD_Mga, M protein trans-acting positive regulator (MGA) PRD domain	NA|1294aa|down_5|NZ_CP014326.1_1940439_1944321_+	TIGR02102, alkaline_amylopullulanase, pullulanase, extracellular, Gram-positive	NA|350aa|down_6|NZ_CP014326.1_1944420_1945470_-	TIGR03858, LLM_2I7G, probable oxidoreductase, LLM family	NA|603aa|down_7|NZ_CP014326.1_1945704_1947513_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|460aa|down_8|NZ_CP014326.1_1947703_1949083_-	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]	NA|618aa|down_9|NZ_CP014326.1_1949181_1951035_-	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional
GCF_001560895.1_ASM156089v1	NZ_CP014326	Streptococcus mitis strain SVGS_061 chromosome, complete genome	5	2049264-2049359	4	CRISPRCasFinder	no		cas3,DEDDh,DinG	Orphan	TTATATATAAAAATTTTACACATT	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG	NA,NA	NA|740aa|up_9|NZ_CP014326.1_2036600_2038820_-	COG2274, SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]	NA|286aa|up_8|NZ_CP014326.1_2039509_2040367_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|217aa|up_7|NZ_CP014326.1_2040504_2041155_-	cd00118, LysM, Lysin Motif is a small domain involved in binding peptidoglycan	NA|224aa|up_6|NZ_CP014326.1_2041394_2042066_+	COG1760, SdaA, L-serine deaminase [Amino acid transport and metabolism]	NA|290aa|up_5|NZ_CP014326.1_2042074_2042944_+	TIGR00718, Probable_L-serine_dehydratase_alpha_chain, L-serine dehydratase, iron-sulfur-dependent, alpha subunit	NA|211aa|up_4|NZ_CP014326.1_2042968_2043601_+	cd04302, HAD_5NT, haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to the Pseudomonas aeruginosa PA0065	NA|451aa|up_3|NZ_CP014326.1_2043748_2045100_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|617aa|up_2|NZ_CP014326.1_2045150_2047001_-	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]	NA|277aa|up_1|NZ_CP014326.1_2047086_2047917_-	cd04195, GT2_AmsE_like, GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis	NA|389aa|up_0|NZ_CP014326.1_2048071_2049238_+	cd17339, MFS_NIMT_CynX_like, 2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters	NA|109aa|down_0|NZ_CP014326.1_2049376_2049703_+	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|198aa|down_1|NZ_CP014326.1_2049689_2050283_+	COG4709, COG4709, Predicted membrane protein [Function unknown]	NA|304aa|down_2|NZ_CP014326.1_2050275_2051187_+	pfam13349, DUF4097, Putative adhesin	NA|346aa|down_3|NZ_CP014326.1_2051244_2052282_+	pfam07133, Merozoite_SPAM, Merozoite surface protein (SPAM)	NA|287aa|down_4|NZ_CP014326.1_2052506_2053367_-	pfam14132, DUF4299, Domain of unknown function (DUF4299)	NA|329aa|down_5|NZ_CP014326.1_2053488_2054475_-	PRK00142, PRK00142, rhodanese-related sulfurtransferase	NA|99aa|down_6|NZ_CP014326.1_2054606_2054903_-	pfam08951, EntA_Immun, Enterocin A Immunity	NA|229aa|down_7|NZ_CP014326.1_2054972_2055659_-	pfam02517, Abi, CAAX protease self-immunity	NA|494aa|down_8|NZ_CP014326.1_2055894_2057376_-	pfam12010, DUF3502, Domain of unknown function (DUF3502)	NA|308aa|down_9|NZ_CP014326.1_2057480_2058404_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]
