assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001559635.1_ASM155963v1	NZ_CP014269	Escherichia coli B strain C3029 chromosome, complete genome	1	623319-623468	1	CRISPRCasFinder	no		DEDDh,DinG,RT,cas3,c2c9_V-U4,csa3	Orphan	CGCGTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCA	54	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,RT,cas3,c2c9_V-U4,csa3	NA|551aa|up_6|NZ_CP014269.1_614551_616204_+,NA	NA|238aa|up_9|NZ_CP014269.1_612454_613168_-	PRK12742, PRK12742, SDR family oxidoreductase	NA|198aa|up_8|NZ_CP014269.1_613238_613832_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|151aa|up_7|NZ_CP014269.1_613976_614429_+	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|551aa|up_6|NZ_CP014269.1_614551_616204_+	NA	NA|335aa|up_5|NZ_CP014269.1_616276_617281_-	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|139aa|up_4|NZ_CP014269.1_617442_617859_+	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|168aa|up_3|NZ_CP014269.1_617904_618408_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|399aa|up_2|NZ_CP014269.1_618600_619797_+	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|952aa|up_1|NZ_CP014269.1_619852_622708_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|148aa|up_0|NZ_CP014269.1_622707_623151_-	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|504aa|down_0|NZ_CP014269.1_623504_625016_-	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|367aa|down_1|NZ_CP014269.1_625282_626383_+	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|361aa|down_2|NZ_CP014269.1_626382_627465_+	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|501aa|down_3|NZ_CP014269.1_627625_629128_-	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|333aa|down_4|NZ_CP014269.1_629205_630204_-	cd01575, PBP1_GntR, ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators	NA|440aa|down_5|NZ_CP014269.1_630270_631590_-	TIGR00791, Gluconate_permease, gluconate transporter	NA|255aa|down_6|NZ_CP014269.1_631652_632417_-	PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional	NA|344aa|down_7|NZ_CP014269.1_632440_633472_-	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional	NA|188aa|down_8|NZ_CP014269.1_633688_634252_+	PRK09825, idnK, gluconokinase	NA|340aa|down_9|NZ_CP014269.1_634255_635275_-	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)
GCF_001559635.1_ASM155963v1	NZ_CP014269	Escherichia coli B strain C3029 chromosome, complete genome	2	802627-802758	1	PILER-CR	no		DEDDh,DinG,RT,cas3,c2c9_V-U4,csa3	Orphan	TTTTCAATATTGGTGAT	17	0	0	NA	NA	NA	2	2	Orphan	DEDDh,DinG,RT,cas3,c2c9_V-U4,csa3	NA,NA	NA|305aa|up_9|NZ_CP014269.1_787614_788529_+	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional	NA|274aa|up_8|NZ_CP014269.1_788695_789517_+	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]	NA|383aa|up_7|NZ_CP014269.1_789972_791121_+	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|1074aa|up_6|NZ_CP014269.1_791138_794360_+	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|132aa|up_5|NZ_CP014269.1_794621_795017_+	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|197aa|up_4|NZ_CP014269.1_795225_795816_-	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|262aa|up_3|NZ_CP014269.1_795821_796607_-	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|518aa|up_2|NZ_CP014269.1_796715_798269_-	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|381aa|up_1|NZ_CP014269.1_799687_800830_-	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|505aa|up_0|NZ_CP014269.1_800860_802375_-	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|257aa|down_0|NZ_CP014269.1_802848_803619_+	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|314aa|down_1|NZ_CP014269.1_803633_804575_+	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|429aa|down_2|NZ_CP014269.1_804625_805912_+	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|96aa|down_3|NZ_CP014269.1_805908_806196_+	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|444aa|down_4|NZ_CP014269.1_806252_807584_+	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|177aa|down_5|NZ_CP014269.1_807691_808222_+	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF	NA|621aa|down_6|NZ_CP014269.1_808214_810077_+	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|160aa|down_7|NZ_CP014269.1_810268_810748_+	PRK10769, folA, type 3 dihydrofolate reductase	NA|281aa|down_8|NZ_CP014269.1_810825_811668_-	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	NA|126aa|down_9|NZ_CP014269.1_811674_812052_-	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed
GCF_001559635.1_ASM155963v1	NZ_CP014269	Escherichia coli B strain C3029 chromosome, complete genome	3	1104703-1104849	2	CRISPRCasFinder	no		DEDDh,DinG,RT,cas3,c2c9_V-U4,csa3	Orphan	TCCGGCCTACGGATGGCGCGAGAATTTGTAGGCCTGATAAGACGCG	46	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,RT,cas3,c2c9_V-U4,csa3	NA,NA	NA|418aa|up_9|NZ_CP014269.1_1089008_1090262_-	PRK09528, lacY, galactoside permease; Reviewed	NA|884aa|up_8|NZ_CP014269.1_1092922_1095574_-	PHA00452, PHA00452, T3/T7-like RNA polymerase	NA|361aa|up_7|NZ_CP014269.1_1096176_1097259_-	PRK09526, lacI, lac repressor; Reviewed	NA|316aa|up_6|NZ_CP014269.1_1097335_1098283_-	PRK09834, PRK09834, DNA-binding transcriptional regulator	NA|555aa|up_5|NZ_CP014269.1_1098359_1100024_+	PRK06183, mhpA, bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase	NA|315aa|up_4|NZ_CP014269.1_1100025_1100970_+	cd07365, MhpB_like, Subunit B of the Class III Extradiol ring-cleavage dioxygenase, 2,3-dihydroxyphenylpropionate 1,2-dioxygenase (MhpB), which catalyzes the oxidization and subsequent ring-opening of 2,3-dihydroxyphenylpropionate	NA|289aa|up_3|NZ_CP014269.1_1100987_1101854_+	TIGR03343, 2-hydroxy-6-oxo-6-phenylhexa-24-dienoate_hydrolase, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase	NA|270aa|up_2|NZ_CP014269.1_1101863_1102673_+	PRK11342, mhpD, 2-keto-4-pentenoate hydratase; Provisional	NA|317aa|up_1|NZ_CP014269.1_1102669_1103620_+	PRK08300, PRK08300, acetaldehyde dehydrogenase; Validated	NA|338aa|up_0|NZ_CP014269.1_1103616_1104630_+	PRK08195, PRK08195, 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase,; Validated	NA|404aa|down_0|NZ_CP014269.1_1105007_1106219_+	PRK11551, PRK11551, putative 3-hydroxyphenylpropionic transporter MhpT; Provisional	NA|180aa|down_1|NZ_CP014269.1_1106320_1106860_+	COG3122, COG3122, Uncharacterized protein conserved in bacteria [Function unknown]	NA|278aa|down_2|NZ_CP014269.1_1107085_1107919_-	TIGR02821, S-formylglutathione_hydrolase, S-formylglutathione hydrolase	NA|370aa|down_3|NZ_CP014269.1_1108011_1109121_-	cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases	NA|92aa|down_4|NZ_CP014269.1_1109155_1109431_-	PRK11352, PRK11352, formaldehyde-responsive transcriptional repressor FrmR	NA|258aa|down_5|NZ_CP014269.1_1109616_1110390_-	TIGR04390, hypothetical_protein, outer membrane protein, YaiO family	NA|321aa|down_6|NZ_CP014269.1_1111332_1112295_+	PRK11480, tauA, taurine transporter substrate binding subunit; Provisional	NA|256aa|down_7|NZ_CP014269.1_1112307_1113075_+	PRK11248, tauB, taurine ABC transporter ATP-binding subunit	NA|276aa|down_8|NZ_CP014269.1_1113071_1113899_+	PRK10160, PRK10160, taurine ABC transporter permease TauC	NA|284aa|down_9|NZ_CP014269.1_1113895_1114747_+	PRK09553, tauD, taurine dioxygenase; Reviewed
GCF_001559635.1_ASM155963v1	NZ_CP014269	Escherichia coli B strain C3029 chromosome, complete genome	4	1136692-1136836	3	CRISPRCasFinder	no		DEDDh,DinG,RT,cas3,c2c9_V-U4,csa3	Orphan	ATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAA	43	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,RT,cas3,c2c9_V-U4,csa3	NA|28aa|up_2|NZ_CP014269.1_1133785_1133869_+,NA	NA|372aa|up_9|NZ_CP014269.1_1128541_1129657_+	PRK10245, adrA, diguanylate cyclase AdrA; Provisional	NA|270aa|up_8|NZ_CP014269.1_1129673_1130483_-	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed	NA|153aa|up_7|NZ_CP014269.1_1130602_1131061_+	PRK00124, PRK00124, YaiI/YqxD family protein	NA|175aa|up_6|NZ_CP014269.1_1131243_1131768_+	PRK03731, aroL, shikimate kinase AroL	NA|64aa|up_5|NZ_CP014269.1_1131817_1132009_+	PRK10380, PRK10380, hypothetical protein; Provisional	NA|226aa|up_4|NZ_CP014269.1_1132266_1132944_+	PRK10481, PRK10481, hypothetical protein; Provisional	NA|95aa|up_3|NZ_CP014269.1_1133015_1133300_+	PRK10579, PRK10579, pyrimidine/purine nucleoside phosphorylase	NA|28aa|up_2|NZ_CP014269.1_1133785_1133869_+	NA	NA|304aa|up_1|NZ_CP014269.1_1134723_1135635_-	COG2974, RdgC, DNA recombination-dependent growth factor C [DNA replication, recombination, and repair]	NA|303aa|up_0|NZ_CP014269.1_1135759_1136668_+	PRK09557, PRK09557, fructokinase; Reviewed	NA|395aa|down_0|NZ_CP014269.1_1136912_1138097_-	PRK10091, PRK10091, MFS transport protein AraJ; Provisional	NA|1049aa|down_1|NZ_CP014269.1_1138222_1141369_-	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional	NA|401aa|down_2|NZ_CP014269.1_1141365_1142568_-	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional	NA|230aa|down_3|NZ_CP014269.1_1142757_1143447_+	PRK10161, PRK10161, phosphate response regulator transcription factor PhoB	NA|432aa|down_4|NZ_CP014269.1_1143504_1144800_+	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR	NA|440aa|down_5|NZ_CP014269.1_1145206_1146526_+	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ	NA|458aa|down_6|NZ_CP014269.1_1146601_1147975_+	PRK10580, proY, putative proline-specific permease; Provisional	NA|606aa|down_7|NZ_CP014269.1_1148130_1149948_+	PRK10785, PRK10785, maltodextrin glucosidase; Provisional	NA|194aa|down_8|NZ_CP014269.1_1149952_1150534_-	PRK10045, PRK10045, ACP phosphodiesterase	NA|357aa|down_9|NZ_CP014269.1_1150626_1151697_+	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional
GCF_001559635.1_ASM155963v1	NZ_CP014269	Escherichia coli B strain C3029 chromosome, complete genome	5	3058254-3058369	4	CRISPRCasFinder	no		DEDDh,DinG,RT,cas3,c2c9_V-U4,csa3	Orphan	GCGTAAACGCCTTATCCGGCCTACGGCTC	29	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,RT,cas3,c2c9_V-U4,csa3	NA,NA	NA|395aa|up_9|NZ_CP014269.1_3037192_3038377_+	PRK05790, PRK05790, putative acyltransferase; Provisional	NA|259aa|up_8|NZ_CP014269.1_3038450_3039227_-	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|550aa|up_7|NZ_CP014269.1_3039231_3040881_-	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|1505aa|up_6|NZ_CP014269.1_3040881_3045396_-	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|208aa|up_5|NZ_CP014269.1_3045419_3046043_-	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|563aa|up_4|NZ_CP014269.1_3046039_3047728_-	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|876aa|up_3|NZ_CP014269.1_3047876_3050504_-	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|241aa|up_2|NZ_CP014269.1_3050650_3051373_+	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|1251aa|up_1|NZ_CP014269.1_3051500_3055253_-	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|762aa|up_0|NZ_CP014269.1_3055948_3058234_+	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|377aa|down_0|NZ_CP014269.1_3058475_3059606_+	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|85aa|down_1|NZ_CP014269.1_3059605_3059860_+	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|217aa|down_2|NZ_CP014269.1_3059913_3060564_-	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|359aa|down_3|NZ_CP014269.1_3061026_3062103_-	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|453aa|down_4|NZ_CP014269.1_3062107_3063466_-	PRK11273, glpT, glycerol-3-phosphate transporter	NA|543aa|down_5|NZ_CP014269.1_3063738_3065367_+	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|420aa|down_6|NZ_CP014269.1_3065356_3066616_+	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|397aa|down_7|NZ_CP014269.1_3066612_3067803_+	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|301aa|down_8|NZ_CP014269.1_3067995_3068898_+	PRK09956, PRK09956, ISNCY family transposase	NA|268aa|down_9|NZ_CP014269.1_3068938_3069742_-	PRK10128, PRK10128, 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional
GCF_001559635.1_ASM155963v1	NZ_CP014269	Escherichia coli B strain C3029 chromosome, complete genome	6	3468755-3468899	5	CRISPRCasFinder	no	csa3	DEDDh,DinG,RT,cas3,c2c9_V-U4,csa3	Type I-A	CACAATGCCTGATGCGACGCTGGAGCGTCTTATCATGCCTACAAA	45	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,RT,cas3,c2c9_V-U4,csa3	NA,NA	NA|150aa|up_9|NZ_CP014269.1_3459745_3460195_+	pfam06610, AlaE, L-alanine exporter	NA|115aa|up_8|NZ_CP014269.1_3460231_3460576_-	PRK10556, PRK10556, hypothetical protein; Provisional	NA|110aa|up_7|NZ_CP014269.1_3460727_3461057_+	PRK10132, PRK10132, hypothetical protein; Provisional	NA|82aa|up_6|NZ_CP014269.1_3461304_3461550_+	PRK10329, PRK10329, glutaredoxin-like protein NrdH	NA|137aa|up_5|NZ_CP014269.1_3461546_3461957_+	PRK03600, nrdI, class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA|715aa|up_4|NZ_CP014269.1_3461929_3464074_+	PRK08188, PRK08188, ribonucleotide-diphosphate reductase subunit alpha; Validated	NA|320aa|up_3|NZ_CP014269.1_3464083_3465043_+	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit	NA|401aa|up_2|NZ_CP014269.1_3465396_3466599_+	PRK10070, PRK10070, proline/glycine betaine ABC transporter ATP-binding protein ProV	NA|355aa|up_1|NZ_CP014269.1_3466591_3467656_+	PRK10952, PRK10952, proline/glycine betaine ABC transporter permease ProW	NA|331aa|up_0|NZ_CP014269.1_3467713_3468706_+	PRK11119, proX, proline/glycine betaine ABC transporter substrate-binding protein ProX	NA|395aa|down_0|NZ_CP014269.1_3468997_3470182_+	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily	NA|246aa|down_1|NZ_CP014269.1_3470305_3471043_+	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]	NA|112aa|down_2|NZ_CP014269.1_3471032_3471368_+	PRK10408, PRK10408, L-valine transporter subunit YgaH	NA|177aa|down_3|NZ_CP014269.1_3471458_3471989_+	PRK10870, PRK10870, transcriptional repressor MprA; Provisional	NA|391aa|down_4|NZ_CP014269.1_3472115_3473288_+	PRK15136, PRK15136, multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA|513aa|down_5|NZ_CP014269.1_3473304_3474843_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|172aa|down_6|NZ_CP014269.1_3474906_3475422_-	PRK02260, PRK02260, S-ribosylhomocysteine lyase	NA|519aa|down_7|NZ_CP014269.1_3475571_3477128_-	PRK02107, PRK02107, glutamate--cysteine ligase; Provisional	NA|143aa|down_8|NZ_CP014269.1_3477200_3477629_-	COG1238, COG1238, Predicted membrane protein [Function unknown]	NA|189aa|down_9|NZ_CP014269.1_3477625_3478192_-	PRK10725, PRK10725, fructose-1-phosphate/6-phosphogluconate phosphatase
GCF_001559635.1_ASM155963v1	NZ_CP014269	Escherichia coli B strain C3029 chromosome, complete genome	7	3538391-3538663	2,6,1	PILER-CR,CRISPRCasFinder,CRT	no		DEDDh,DinG,RT,cas3,c2c9_V-U4,csa3	Orphan	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	4,4,4	4	Orphan	DEDDh,DinG,RT,cas3,c2c9_V-U4,csa3	NA,NA	NA|254aa|up_9|NZ_CP014269.1_3530203_3530965_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_CP014269.1_3530945_3531995_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_CP014269.1_3531991_3532471_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_CP014269.1_3532470_3533181_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_CP014269.1_3533199_3533511_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_CP014269.1_3533704_3534028_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_CP014269.1_3534077_3534683_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_2|NZ_CP014269.1_3534682_3536110_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_CP014269.1_3536111_3537020_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|346aa|up_0|NZ_CP014269.1_3537271_3538309_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|371aa|down_0|NZ_CP014269.1_3538740_3539853_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|51aa|down_1|NZ_CP014269.1_3540045_3540198_-	pfam01848, HOK_GEF, Hok/gef family	NA|245aa|down_2|NZ_CP014269.1_3540462_3541197_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|down_3|NZ_CP014269.1_3541270_3542983_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|600aa|down_4|NZ_CP014269.1_3542982_3544782_-	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|121aa|down_5|NZ_CP014269.1_3545100_3545463_+	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|424aa|down_6|NZ_CP014269.1_3545540_3546812_+	PRK10015, PRK10015, oxidoreductase; Provisional	NA|87aa|down_7|NZ_CP014269.1_3546802_3547063_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|192aa|down_8|NZ_CP014269.1_3547079_3547655_+	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|287aa|down_9|NZ_CP014269.1_3547802_3548663_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]
GCF_001559635.1_ASM155963v1	NZ_CP014269	Escherichia coli B strain C3029 chromosome, complete genome	8	3556897-3557719	7,2,3,4	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no		DEDDh,DinG,RT,cas3,c2c9_V-U4,csa3	Orphan	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,GTCGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29,31	0	0	NA	NA	I-E:I-E:I-E:I-E	13,13,9,9	13	Orphan	DEDDh,DinG,RT,cas3,c2c9_V-U4,csa3	NA,NA|47aa|down_1|NZ_CP014269.1_3558868_3559009_+	NA|424aa|up_9|NZ_CP014269.1_3545540_3546812_+	PRK10015, PRK10015, oxidoreductase; Provisional	NA|87aa|up_8|NZ_CP014269.1_3546802_3547063_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|192aa|up_7|NZ_CP014269.1_3547079_3547655_+	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|287aa|up_6|NZ_CP014269.1_3547802_3548663_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|260aa|up_5|NZ_CP014269.1_3548659_3549439_-	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|470aa|up_4|NZ_CP014269.1_3549416_3550826_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|485aa|up_3|NZ_CP014269.1_3550847_3552302_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|262aa|up_2|NZ_CP014269.1_3552371_3553157_-	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|426aa|up_1|NZ_CP014269.1_3553475_3554753_+	cd06174, MFS, Major Facilitator Superfamily	NA|493aa|up_0|NZ_CP014269.1_3554779_3556258_+	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|224aa|down_0|NZ_CP014269.1_3558058_3558730_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|47aa|down_1|NZ_CP014269.1_3558868_3559009_+	NA	NA|291aa|down_2|NZ_CP014269.1_3559022_3559895_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|433aa|down_3|NZ_CP014269.1_3559954_3561253_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_4|NZ_CP014269.1_3561340_3562978_-	PRK05380, pyrG, CTP synthetase; Validated	NA|264aa|down_5|NZ_CP014269.1_3563205_3563997_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|112aa|down_6|NZ_CP014269.1_3564067_3564403_-	PRK09907, PRK09907, endoribonuclease MazF	NA|83aa|down_7|NZ_CP014269.1_3564402_3564651_-	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|745aa|down_8|NZ_CP014269.1_3564728_3566963_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|434aa|down_9|NZ_CP014269.1_3567010_3568312_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
