bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	1.1|261365|25|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	96.00	25	1	0	1	25	157840	157816	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	4e-05	38.0	1.0	TTTCTTTTCGAAATTCTCTTTGTTG	157816-157840	CAACACAGAGAATTTCGAAAAGAAA	1
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	1.1|261365|25|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	96.00	25	1	0	1	25	362666	362642	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	4e-05	38.0	1.0	TTTCTTTTCGAAATTCTCTTTGTTG	362642-362666	CAACATAGAGAATTTCGAAAAGAAA	1
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	1.1|261365|25|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	96.00	25	1	0	1	25	362721	362697	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	4e-05	38.0	1.0	TTTCTTTTCGAAATTCTCTTTGTTG	362697-362721	CAACATAGAGAATTTCGAAAAGAAA	1
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	1.1|261365|25|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	96.00	25	1	0	1	25	633802	633778	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	4e-05	38.0	1.0	TTTCTTTTCGAAATTCTCTTTGTTG	633778-633802	CAACACAGAGAATTTCGAAAAGAAA	1
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	1.1|261365|25|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	96.00	25	1	0	1	25	804208	804232	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	4e-05	38.0	1.0	TTTCTTTTCGAAATTCTCTTTGTTG	804208-804232	TTTCTTTTCGAAATTCTCTGTGTTG	1
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	1.1|261365|25|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	96.00	25	1	0	1	25	804266	804290	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	4e-05	38.0	1.0	TTTCTTTTCGAAATTCTCTTTGTTG	804266-804290	TTTCTTTTCGAAATTCTCTGTGTTG	1
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	1.1|261365|25|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	96.00	25	1	0	1	25	804324	804348	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	4e-05	38.0	1.0	TTTCTTTTCGAAATTCTCTTTGTTG	804324-804348	TTTCTTTTCGAAATTCTCTGTGTTG	1
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	1.1|261365|25|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	96.00	25	1	0	1	25	804382	804406	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	4e-05	38.0	1.0	TTTCTTTTCGAAATTCTCTTTGTTG	804382-804406	TTTCTTTTCGAAATTCTCTGTGTTG	1
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	1.1|261365|25|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	96.00	25	1	0	1	25	1017922	1017946	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	4e-05	38.0	1.0	TTTCTTTTCGAAATTCTCTTTGTTG	1017922-1017946	TTTCTTTTCGAAATTCTCTGTGTTG	1
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	1.1|261365|25|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	96.00	25	1	0	1	25	1330981	1330957	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	4e-05	38.0	1.0	TTTCTTTTCGAAATTCTCTTTGTTG	1330957-1330981	CAACACAGAGAATTTCGAAAAGAAA	1
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	1.1|261365|25|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	96.00	25	1	0	1	25	1420878	1420902	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	4e-05	38.0	1.0	TTTCTTTTCGAAATTCTCTTTGTTG	1420878-1420902	TTTCTTTTCGAAATTCTCTGTGTTG	1
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	1.1|261365|25|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	96.00	25	1	0	1	25	1601351	1601375	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	4e-05	38.0	1.0	TTTCTTTTCGAAATTCTCTTTGTTG	1601351-1601375	TTTCTTTTCGAAATTCTCTGTGTTG	1
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	1.1|261365|25|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	96.00	25	1	0	1	25	1777149	1777125	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	4e-05	38.0	1.0	TTTCTTTTCGAAATTCTCTTTGTTG	1777125-1777149	CAACACAGAGAATTTCGAAAAGAAA	1
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	1.1|261365|25|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	96.00	25	1	0	1	25	1929821	1929845	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	4e-05	38.0	1.0	TTTCTTTTCGAAATTCTCTTTGTTG	1929821-1929845	TTTCTTTTCGAAATTCTCTGTGTTG	1
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	1.1|261365|25|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	96.00	25	1	0	1	25	2278603	2278627	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	4e-05	38.0	1.0	TTTCTTTTCGAAATTCTCTTTGTTG	2278603-2278627	TTTCTTTTCGAAATTCTCTGTGTTG	1
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	1.1|261365|25|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	96.00	25	1	0	1	25	2615454	2615430	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	4e-05	38.0	1.0	TTTCTTTTCGAAATTCTCTTTGTTG	2615430-2615454	CAACACAGAGAATTTCGAAAAGAAA	1
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	1.1|261365|25|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	92.00	25	2	0	1	25	811522	811546	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	4e-04	34.9	1.0	TTTCTTTTCGAAATTCTCTTTGTTG	811522-811546	TTTCATTTCGAAATTCTCTGTGTTG	2
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	1.1|261365|25|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	92.00	25	2	0	1	25	1335447	1335471	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	4e-04	34.9	1.0	TTTCTTTTCGAAATTCTCTTTGTTG	1335447-1335471	TTTCTTATCGAAATTCTCTGTGTTG	2
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	3.1|798696|32|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	96.88	32	1	0	1	32	362685	362654	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	3e-08	49.1	1.0	ACTTGCATTGTTTGTAGAATTTCTTTTCGAAA	362654-362685	TTTCGAAAAGAAATTCTACAAGCAATGCAAGT	1
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	3.1|798696|32|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	96.88	32	1	0	1	32	362740	362709	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	3e-08	49.1	1.0	ACTTGCATTGTTTGTAGAATTTCTTTTCGAAA	362709-362740	TTTCGAAAAGAAATTCTACAAGCAATGCAAGT	1
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	3.1|798696|32|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	96.88	32	1	0	1	32	1777168	1777137	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	3e-08	49.1	1.0	ACTTGCATTGTTTGTAGAATTTCTTTTCGAAA	1777137-1777168	TTTCGAAAAGAAATTCTACAGACAATGCAAGT	1
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	3.1|798696|32|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	93.75	32	2	0	1	32	157859	157828	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	2e-07	46.0	1.0	ACTTGCATTGTTTGTAGAATTTCTTTTCGAAA	157828-157859	TTTCGAAAAGAAATTCTACAGGCAATGCAAGT	2
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	3.1|798696|32|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	93.75	32	2	0	1	32	633821	633790	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	2e-07	46.0	1.0	ACTTGCATTGTTTGTAGAATTTCTTTTCGAAA	633790-633821	TTTCGAAAAGAAATTCTACAGGCAATGCAAGT	2
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	3.1|798696|32|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	93.75	32	2	0	1	32	804247	804278	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	2e-07	46.0	1.0	ACTTGCATTGTTTGTAGAATTTCTTTTCGAAA	804247-804278	ACTTGCATTGCCTGTAGAATTTCTTTTCGAAA	2
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	3.1|798696|32|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	93.75	32	2	0	1	32	804305	804336	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	2e-07	46.0	1.0	ACTTGCATTGTTTGTAGAATTTCTTTTCGAAA	804305-804336	ACTTGCATTGCCTGTAGAATTTCTTTTCGAAA	2
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	3.1|798696|32|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	93.75	32	2	0	1	32	804363	804394	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	2e-07	46.0	1.0	ACTTGCATTGTTTGTAGAATTTCTTTTCGAAA	804363-804394	ACTTGCATTGCCTGTAGAATTTCTTTTCGAAA	2
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	3.1|798696|32|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	93.75	32	2	0	1	32	1939151	1939182	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	2e-07	46.0	1.0	ACTTGCATTGTTTGTAGAATTTCTTTTCGAAA	1939151-1939182	ACTTGCATTGTCTGTAGAATTTCCTTTCGAAA	2
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	3.1|798696|32|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	93.75	32	2	0	1	32	2615473	2615442	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	2e-07	46.0	1.0	ACTTGCATTGTTTGTAGAATTTCTTTTCGAAA	2615442-2615473	TTTCGAAAAGAAATTCTACAGGCAATGCAAGT	2
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	6.1|1928408|31|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	96.77	31	1	0	1	31	362567	362537	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	8e-08	47.5	1.0	CACATTATCGTAAGCTGACTTTTCGTCAGCT	362537-362567	AGCTGACGAAAAGTCAGCTTACAATAATGTG	1
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	6.1|1928408|31|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	96.77	31	1	0	1	31	633875	633845	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	8e-08	47.5	1.0	CACATTATCGTAAGCTGACTTTTCGTCAGCT	633845-633875	AGCTGACGAAAAGTCAGCTTACAATAATGTG	1
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	6.1|1928408|31|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	96.77	31	1	0	1	31	1017849	1017879	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	8e-08	47.5	1.0	CACATTATCGTAAGCTGACTTTTCGTCAGCT	1017849-1017879	CACATTATTGTAAGCTGACTTTTCGTCAGCT	1
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	6.1|1928408|31|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	96.77	31	1	0	1	31	1117252	1117222	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	8e-08	47.5	1.0	CACATTATCGTAAGCTGACTTTTCGTCAGCT	1117222-1117252	AGCTGACGAAAAGTCAGCTTACAATAATGTG	1
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	6.1|1928408|31|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	96.77	31	1	0	1	31	1331054	1331024	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	8e-08	47.5	1.0	CACATTATCGTAAGCTGACTTTTCGTCAGCT	1331024-1331054	AGCTGACGAAAAGTCAGCTTACAATAATGTG	1
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	6.1|1928408|31|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	96.77	31	1	0	1	31	1601278	1601308	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	8e-08	47.5	1.0	CACATTATCGTAAGCTGACTTTTCGTCAGCT	1601278-1601308	CACATTATTGTAAGCTGACTTTTCGTCAGCT	1
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	6.1|1928408|31|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	96.77	31	1	0	1	31	2278647	2278677	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	8e-08	47.5	1.0	CACATTATCGTAAGCTGACTTTTCGTCAGCT	2278647-2278677	CACATTATTGTAAGCTGACTTTTCGTCAGCT	1
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	6.1|1928408|31|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	96.77	31	1	0	1	31	2565011	2565041	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	8e-08	47.5	1.0	CACATTATCGTAAGCTGACTTTTCGTCAGCT	2565011-2565041	CACATTATTGTAAGCTGACTTTTCGTCAGCT	1
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	6.1|1928408|31|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	93.55	31	2	0	1	31	804135	804165	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	7e-07	44.4	1.0	CACATTATCGTAAGCTGACTTTTCGTCAGCT	804135-804165	CACATTATTGTAAGCTGACTTTTCGTAAGCT	2
NZ_AP014653	Staphylococcus aureus subsp. aureus strain TMUS2134	6.1|1928408|31|NZ_AP014653|CRISPRCasFinder	NZ_AP014653.1	Staphylococcus aureus subsp. aureus strain TMUS2134	93.55	31	2	0	1	31	2289450	2289480	261332-261422|402580-402681|798673-798750|1095478-1095570|1886692-1886773|1928383-1928463|2173550-2173630|2440699-2440796	7e-07	44.4	1.0	CACATTATCGTAAGCTGACTTTTCGTCAGCT	2289450-2289480	CACATTATTGTATGCTGACTTTTCGTCAGCT	2
