assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001549655.1_ASM154965v1	NZ_AP014652	Staphylococcus aureus subsp. aureus strain TMUS2126	1	261332-261422	1	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	GGGCCCACACCCCAACTTGCATTGCCTGTAGAA	33	1	18	261365-261389|261365-261389|261365-261389|261365-261389|261365-261389|261365-261389|261365-261389|261365-261389|261365-261389|261365-261389|261365-261389|261365-261389|261365-261389|261365-261389|261365-261389|261365-261389|261365-261389|261365-261389	NZ_AP014652.1_157840-157816|NZ_AP014652.1_362666-362642|NZ_AP014652.1_362721-362697|NZ_AP014652.1_633802-633778|NZ_AP014652.1_804208-804232|NZ_AP014652.1_804266-804290|NZ_AP014652.1_804324-804348|NZ_AP014652.1_804382-804406|NZ_AP014652.1_1017922-1017946|NZ_AP014652.1_1330981-1330957|NZ_AP014652.1_1420878-1420902|NZ_AP014652.1_1601351-1601375|NZ_AP014652.1_1777149-1777125|NZ_AP014652.1_1929821-1929845|NZ_AP014652.1_2278603-2278627|NZ_AP014652.1_2615454-2615430|NZ_AP014652.1_811522-811546|NZ_AP014652.1_1335447-1335471	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|49aa|up_4|NZ_AP014652.1_255601_255748_+,NA	NA|699aa|up_9|NZ_AP014652.1_250191_252288_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|156aa|up_8|NZ_AP014652.1_252272_252740_+	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|93aa|up_7|NZ_AP014652.1_252762_253041_+	cd05566, PTS_IIB_galactitol, PTS_IIB_galactitol: subunit IIB of enzyme II (EII) of the galactitol-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|420aa|up_6|NZ_AP014652.1_253267_254527_+	COG3775, GatC, Phosphotransferase system, galactitol-specific IIC component [Carbohydrate transport and metabolism]	NA|352aa|up_5|NZ_AP014652.1_254544_255600_+	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family	NA|49aa|up_4|NZ_AP014652.1_255601_255748_+	NA	NA|348aa|up_3|NZ_AP014652.1_255771_256815_+	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases	NA|239aa|up_2|NZ_AP014652.1_257342_258059_+	PRK13385, PRK13385, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional	NA|342aa|up_1|NZ_AP014652.1_258051_259077_+	cd08237, ribitol-5-phosphate_DH, ribitol-5-phosphate dehydrogenase	NA|565aa|up_0|NZ_AP014652.1_259098_260793_+	pfam04464, Glyphos_transf, CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase	NA|390aa|down_0|NZ_AP014652.1_261843_263013_+	pfam04464, Glyphos_transf, CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase	NA|239aa|down_1|NZ_AP014652.1_263288_264005_+	PRK13385, PRK13385, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional	NA|342aa|down_2|NZ_AP014652.1_263997_265023_+	cd08237, ribitol-5-phosphate_DH, ribitol-5-phosphate dehydrogenase	NA|563aa|down_3|NZ_AP014652.1_265044_266733_+	pfam04464, Glyphos_transf, CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase	NA|574aa|down_4|NZ_AP014652.1_266765_268487_+	pfam18674, TarS_C1, TarS beta-glycosyltransferase C-terminal domain 1	NA|225aa|down_5|NZ_AP014652.1_268630_269305_+	PRK13276, PRK13276, iron-sulfur cluster repair di-iron protein ScdA	NA|585aa|down_6|NZ_AP014652.1_269548_271303_+	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms]	NA|247aa|down_7|NZ_AP014652.1_271305_272046_+	PRK14084, PRK14084, DNA-binding response regulator	NA|148aa|down_8|NZ_AP014652.1_272158_272602_+	PRK04125, PRK04125, antiholin-like protein LrgA	NA|234aa|down_9|NZ_AP014652.1_272594_273296_+	PRK04288, PRK04288, antiholin-like protein LrgB; Provisional
GCF_001549655.1_ASM154965v1	NZ_AP014652	Staphylococcus aureus subsp. aureus strain TMUS2126	2	402580-402681	2	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	TTATGAATTGAGTATTAAATTTG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|70aa|up_9|NZ_AP014652.1_392791_393001_-,NA|128aa|up_7|NZ_AP014652.1_393825_394209_-,NA|540aa|up_5|NZ_AP014652.1_395163_396783_-,NA|33aa|up_0|NZ_AP014652.1_401804_401903_+,NA|221aa|down_1|NZ_AP014652.1_403771_404434_-,NA|131aa|down_8|NZ_AP014652.1_412825_413218_-,NA|72aa|down_9|NZ_AP014652.1_413255_413471_+	NA|70aa|up_9|NZ_AP014652.1_392791_393001_-	NA	NA|194aa|up_8|NZ_AP014652.1_393178_393760_+	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|128aa|up_7|NZ_AP014652.1_393825_394209_-	NA	NA|209aa|up_6|NZ_AP014652.1_394464_395091_-	NF033193, lipo_NDxxF, NDxxF motif lipoprotein	NA|540aa|up_5|NZ_AP014652.1_395163_396783_-	NA	NA|508aa|up_4|NZ_AP014652.1_396897_398421_-	PRK15317, PRK15317, alkyl hydroperoxide reductase subunit F; Provisional	NA|190aa|up_3|NZ_AP014652.1_398436_399006_-	TIGR03137, AhpC, peroxiredoxin	NA|252aa|up_2|NZ_AP014652.1_399497_400253_+	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA	NA|463aa|up_1|NZ_AP014652.1_400331_401720_-	COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only]	NA|33aa|up_0|NZ_AP014652.1_401804_401903_+	NA	NA|319aa|down_0|NZ_AP014652.1_402697_403654_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|221aa|down_1|NZ_AP014652.1_403771_404434_-	NA	NA|136aa|down_2|NZ_AP014652.1_404576_404984_-	pfam11181, YflT, Heat induced stress protein YflT	NA|193aa|down_3|NZ_AP014652.1_405496_406075_+	PRK09219, PRK09219, xanthine phosphoribosyltransferase; Validated	NA|423aa|down_4|NZ_AP014652.1_406074_407343_+	TIGR03173, pbuX, xanthine permease	NA|489aa|down_5|NZ_AP014652.1_407380_408847_+	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed	NA|514aa|down_6|NZ_AP014652.1_408871_410413_+	PRK00074, guaA, GMP synthase; Reviewed	NA|369aa|down_7|NZ_AP014652.1_410924_412031_+	pfam07751, Abi_2, Abi-like protein	NA|131aa|down_8|NZ_AP014652.1_412825_413218_-	NA	NA|72aa|down_9|NZ_AP014652.1_413255_413471_+	NA
GCF_001549655.1_ASM154965v1	NZ_AP014652	Staphylococcus aureus subsp. aureus strain TMUS2126	3	798673-798750	3	CRISPRCasFinder	no	cas3	cas3,DEDDh,DinG,csa3,WYL	Unclear	TTCTTTATGTTGGGGCCCCGCCA	23	1	10	798696-798727|798696-798727|798696-798727|798696-798727|798696-798727|798696-798727|798696-798727|798696-798727|798696-798727|798696-798727	NZ_AP014652.1_362685-362654|NZ_AP014652.1_362740-362709|NZ_AP014652.1_1777168-1777137|NZ_AP014652.1_157859-157828|NZ_AP014652.1_633821-633790|NZ_AP014652.1_804247-804278|NZ_AP014652.1_804305-804336|NZ_AP014652.1_804363-804394|NZ_AP014652.1_1939151-1939182|NZ_AP014652.1_2615473-2615442	NA	1	1	Unclear	cas3,DEDDh,DinG,csa3,WYL	NA|35aa|up_7|NZ_AP014652.1_789587_789692_+,NA|36aa|up_5|NZ_AP014652.1_791124_791232_+,NA	NA|191aa|up_9|NZ_AP014652.1_786028_786601_+	COG1544, COG1544, Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis]	NA|844aa|up_8|NZ_AP014652.1_787014_789546_+	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|35aa|up_7|NZ_AP014652.1_789587_789692_+	NA	NA|370aa|up_6|NZ_AP014652.1_789860_790971_+	PRK00578, prfB, peptide chain release factor 2; Validated	NA|36aa|up_5|NZ_AP014652.1_791124_791232_+	NA	NA|280aa|up_4|NZ_AP014652.1_791379_792219_+	COG3942, COG3942, Surface antigen [General function prediction only]	NA|217aa|up_3|NZ_AP014652.1_792392_793043_+	pfam12917, HD_2, HD containing hydrolase-like enzyme	NA|79aa|up_2|NZ_AP014652.1_793039_793276_+	COG4897, CsbA, Uncharacterized protein conserved in bacteria [Function unknown]	NA|662aa|up_1|NZ_AP014652.1_793544_795530_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|949aa|up_0|NZ_AP014652.1_795537_798384_+	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|311aa|down_0|NZ_AP014652.1_798989_799922_+	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional	NA|280aa|down_1|NZ_AP014652.1_799927_800767_+	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed	NA|162aa|down_2|NZ_AP014652.1_800774_801260_+	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|480aa|down_3|NZ_AP014652.1_801267_802707_+	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs	NA|312aa|down_4|NZ_AP014652.1_802773_803709_+	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|304aa|down_5|NZ_AP014652.1_804707_805619_+	COG1660, COG1660, Predicted P-loop-containing kinase [General function prediction only]	NA|332aa|down_6|NZ_AP014652.1_805615_806611_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|196aa|down_7|NZ_AP014652.1_808228_808816_+	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|301aa|down_8|NZ_AP014652.1_809058_809961_-	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]	NA|210aa|down_9|NZ_AP014652.1_810663_811293_+	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed
GCF_001549655.1_ASM154965v1	NZ_AP014652	Staphylococcus aureus subsp. aureus strain TMUS2126	4	1095478-1095570	4	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	TCATAATGATTAAAAATCAAAGAGG	25	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|359aa|up_8|NZ_AP014652.1_1086095_1087172_+,NA|36aa|up_3|NZ_AP014652.1_1090199_1090307_+,NA|32aa|down_5|NZ_AP014652.1_1102350_1102446_-	NA|228aa|up_9|NZ_AP014652.1_1085412_1086096_+	TIGR03656, IsdC, heme uptake protein IsdC	NA|359aa|up_8|NZ_AP014652.1_1086095_1087172_+	NA	NA|293aa|up_7|NZ_AP014652.1_1087168_1088047_+	TIGR03659, heme_ABC_transporter_heme-binding_protein_isdE, heme ABC transporter, heme-binding protein isdE	NA|323aa|up_6|NZ_AP014652.1_1088056_1089025_+	COG0609, FepD, ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and metabolism]	NA|245aa|up_5|NZ_AP014652.1_1089086_1089821_+	COG4509, COG4509, Uncharacterized protein conserved in bacteria [Function unknown]	NA|108aa|up_4|NZ_AP014652.1_1089839_1090163_+	PRK13312, PRK13312, staphylobilin-forming heme oxygenase IsdG	NA|36aa|up_3|NZ_AP014652.1_1090199_1090307_+	NA	NA|247aa|up_2|NZ_AP014652.1_1090546_1091287_+	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis]	NA|353aa|up_1|NZ_AP014652.1_1091666_1092725_+	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated	NA|801aa|up_0|NZ_AP014652.1_1092724_1095127_+	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed	NA|89aa|down_0|NZ_AP014652.1_1096869_1097136_+	PRK14126, PRK14126, cell division protein ZapA; Provisional	NA|174aa|down_1|NZ_AP014652.1_1097136_1097658_+	COG1286, CvpA, Uncharacterized membrane protein, required for colicin V production [General function prediction only]	NA|571aa|down_2|NZ_AP014652.1_1097730_1099443_+	PRK08609, PRK08609, DNA polymerase/3'-5' exonuclease PolX	NA|783aa|down_3|NZ_AP014652.1_1099452_1101801_+	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed	NA|105aa|down_4|NZ_AP014652.1_1101973_1102288_+	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin	NA|32aa|down_5|NZ_AP014652.1_1102350_1102446_-	NA	NA|594aa|down_6|NZ_AP014652.1_1102611_1104393_+	PRK00558, uvrC, excinuclease ABC subunit UvrC	NA|205aa|down_7|NZ_AP014652.1_1104716_1105331_+	cd03497, SQR_TypeB_1_TM, Succinate:quinone oxidoreductase (SQR) Type B subfamily 1, transmembrane subunit; composed of proteins similar to Bacillus subtilis SQR	NA|589aa|down_8|NZ_AP014652.1_1105382_1107149_+	PRK08641, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed	NA|272aa|down_9|NZ_AP014652.1_1107148_1107964_+	PRK08640, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed
GCF_001549655.1_ASM154965v1	NZ_AP014652	Staphylococcus aureus subsp. aureus strain TMUS2126	5	1886692-1886773	5	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	TGCAAGTTGGCGGGGCCACAACATAG	26	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|33aa|up_8|NZ_AP014652.1_1878094_1878193_-,NA|132aa|up_0|NZ_AP014652.1_1885996_1886392_-,NA|51aa|down_0|NZ_AP014652.1_1887225_1887378_-	NA|399aa|up_9|NZ_AP014652.1_1876607_1877804_-	COG0420, SbcD, DNA repair exonuclease [DNA replication, recombination, and repair]	NA|33aa|up_8|NZ_AP014652.1_1878094_1878193_-	NA	NA|115aa|up_7|NZ_AP014652.1_1878685_1879030_-	PRK13676, PRK13676, YlbF/YmcA family competence regulator	NA|375aa|up_6|NZ_AP014652.1_1879098_1880223_-	COG4399, COG4399, Uncharacterized protein conserved in bacteria [Function unknown]	NA|155aa|up_5|NZ_AP014652.1_1880401_1880866_-	COG1476, COG1476, Predicted transcriptional regulators [Transcription]	NA|208aa|up_4|NZ_AP014652.1_1881221_1881845_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|371aa|up_3|NZ_AP014652.1_1881866_1882979_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|274aa|up_2|NZ_AP014652.1_1883141_1883963_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|462aa|up_1|NZ_AP014652.1_1884415_1885801_-	PRK00485, fumC, fumarate hydratase; Reviewed	NA|132aa|up_0|NZ_AP014652.1_1885996_1886392_-	NA	NA|51aa|down_0|NZ_AP014652.1_1887225_1887378_-	NA	NA|200aa|down_1|NZ_AP014652.1_1887402_1888002_-	COG0363, NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism]	NA|157aa|down_2|NZ_AP014652.1_1888159_1888630_-	COG0219, CspR, Predicted rRNA methylase (SpoU class) [Translation, ribosomal structure and biogenesis]	NA|376aa|down_3|NZ_AP014652.1_1888634_1889762_-	TIGR00276, iron-sulfur_cluster-binding_protein, epoxyqueuosine reductase	NA|241aa|down_4|NZ_AP014652.1_1889912_1890635_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|486aa|down_5|NZ_AP014652.1_1890627_1892085_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|354aa|down_6|NZ_AP014652.1_1892342_1893404_-	COG3641, PfoR, Predicted membrane protein, putative toxin regulator [General function prediction only]	NA|149aa|down_7|NZ_AP014652.1_1902350_1902797_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|317aa|down_8|NZ_AP014652.1_1902893_1903844_-	cd12155, PGDH_1, Phosphoglycerate Dehydrogenase, 2-hydroxyacid dehydrogenase family	NA|152aa|down_9|NZ_AP014652.1_1903849_1904305_-	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
GCF_001549655.1_ASM154965v1	NZ_AP014652	Staphylococcus aureus subsp. aureus strain TMUS2126	6	1928383-1928463	6	CRISPRCasFinder	no	DEDDh	cas3,DEDDh,DinG,csa3,WYL	Unclear	TCTATGTTGGGGCCCCGCCAACCTG	25	1	10	1928408-1928438|1928408-1928438|1928408-1928438|1928408-1928438|1928408-1928438|1928408-1928438|1928408-1928438|1928408-1928438|1928408-1928438|1928408-1928438	NZ_AP014652.1_362567-362537|NZ_AP014652.1_633875-633845|NZ_AP014652.1_1017849-1017879|NZ_AP014652.1_1117252-1117222|NZ_AP014652.1_1331054-1331024|NZ_AP014652.1_1601278-1601308|NZ_AP014652.1_2278647-2278677|NZ_AP014652.1_2565011-2565041|NZ_AP014652.1_804135-804165|NZ_AP014652.1_2289450-2289480	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|92aa|up_6|NZ_AP014652.1_1922585_1922861_+,NA|129aa|up_1|NZ_AP014652.1_1926842_1927229_-,NA|138aa|down_1|NZ_AP014652.1_1930148_1930562_-,NA|37aa|down_2|NZ_AP014652.1_1930590_1930701_-,NA|31aa|down_6|NZ_AP014652.1_1933706_1933799_-	NA|419aa|up_9|NZ_AP014652.1_1920508_1921765_-	pfam02073, Peptidase_M29, Thermophilic metalloprotease (M29)	NA|67aa|up_8|NZ_AP014652.1_1921767_1921968_-	COG4840, COG4840, Uncharacterized protein conserved in bacteria [Function unknown]	NA|155aa|up_7|NZ_AP014652.1_1922114_1922579_+	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase	NA|92aa|up_6|NZ_AP014652.1_1922585_1922861_+	NA	NA|406aa|up_5|NZ_AP014652.1_1923138_1924356_+	COG1295, Rbn, Ribonuclease BN family enzyme [Replication, recombination, and repair]	NA|210aa|up_4|NZ_AP014652.1_1924467_1925097_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|348aa|up_3|NZ_AP014652.1_1925086_1926130_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|234aa|up_2|NZ_AP014652.1_1926126_1926828_-	COG4758, COG4758, Predicted membrane protein [Function unknown]	NA|129aa|up_1|NZ_AP014652.1_1926842_1927229_-	NA	NA|253aa|up_0|NZ_AP014652.1_1927445_1928204_-	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|329aa|down_0|NZ_AP014652.1_1928731_1929718_+	COG4129, COG4129, Predicted membrane protein [Function unknown]	NA|138aa|down_1|NZ_AP014652.1_1930148_1930562_-	NA	NA|37aa|down_2|NZ_AP014652.1_1930590_1930701_-	NA	NA|244aa|down_3|NZ_AP014652.1_1930786_1931518_-	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only]	NA|438aa|down_4|NZ_AP014652.1_1931519_1932833_-	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane]	NA|167aa|down_5|NZ_AP014652.1_1933124_1933625_+	COG1528, Ftn, Ferritin-like protein [Inorganic ion transport and metabolism]	NA|31aa|down_6|NZ_AP014652.1_1933706_1933799_-	NA	DEDDh|185aa|down_7|NZ_AP014652.1_1934014_1934569_+	cd06130, DNA_pol_III_epsilon_like, an uncharacterized bacterial subgroup of the DEDDh 3'-5' exonuclease domain family with similarity to the epsilon subunit of DNA polymerase III	NA|357aa|down_8|NZ_AP014652.1_1934635_1935706_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|177aa|down_9|NZ_AP014652.1_1935952_1936483_-	pfam11667, DUF3267, Putative zincin peptidase
GCF_001549655.1_ASM154965v1	NZ_AP014652	Staphylococcus aureus subsp. aureus strain TMUS2126	7	2173550-2173630	7	CRISPRCasFinder	no	csa3	cas3,DEDDh,DinG,csa3,WYL	Type I-A	CAACTTTAGTTGTTAGGGGCTCTT	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|77aa|up_5|NZ_AP014652.1_2168421_2168652_-,NA|364aa|up_0|NZ_AP014652.1_2172441_2173533_+,NA|35aa|down_0|NZ_AP014652.1_2173965_2174070_-,NA|53aa|down_1|NZ_AP014652.1_2174749_2174908_+	NA|237aa|up_9|NZ_AP014652.1_2164032_2164743_+	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|148aa|up_8|NZ_AP014652.1_2164863_2165307_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|138aa|up_7|NZ_AP014652.1_2165506_2165920_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|458aa|up_6|NZ_AP014652.1_2166376_2167750_-	pfam01878, EVE, EVE domain	NA|77aa|up_5|NZ_AP014652.1_2168421_2168652_-	NA	NA|313aa|up_4|NZ_AP014652.1_2168682_2169621_-	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|222aa|up_3|NZ_AP014652.1_2170056_2170722_-	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	csa3|107aa|up_2|NZ_AP014652.1_2170873_2171194_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|327aa|up_1|NZ_AP014652.1_2171195_2172176_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|364aa|up_0|NZ_AP014652.1_2172441_2173533_+	NA	NA|35aa|down_0|NZ_AP014652.1_2173965_2174070_-	NA	NA|53aa|down_1|NZ_AP014652.1_2174749_2174908_+	NA	NA|286aa|down_2|NZ_AP014652.1_2175565_2176423_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|down_3|NZ_AP014652.1_2176490_2177273_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|602aa|down_4|NZ_AP014652.1_2177504_2179310_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|down_5|NZ_AP014652.1_2179990_2181529_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|down_6|NZ_AP014652.1_2181563_2183696_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|down_7|NZ_AP014652.1_2183707_2184142_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|369aa|down_8|NZ_AP014652.1_2184141_2185248_+	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional	NA|2485aa|down_9|NZ_AP014652.1_2185566_2193021_-	TIGR04263, cell_wall_surface_anchor_family_protein, SasC/Mrp/FmtB intercellular aggregation domain
GCF_001549655.1_ASM154965v1	NZ_AP014652	Staphylococcus aureus subsp. aureus strain TMUS2126	8	2440699-2440796	8	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	TTTCTGCGAATTTTATGAGCTAGAAAGGC	29	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|35aa|up_2|NZ_AP014652.1_2438421_2438526_+,NA|35aa|down_0|NZ_AP014652.1_2441112_2441217_-	NA|200aa|up_9|NZ_AP014652.1_2431898_2432498_-	COG1651, DsbG, Protein-disulfide isomerase [Posttranslational modification, protein turnover, chaperones]	NA|121aa|up_8|NZ_AP014652.1_2432516_2432879_-	pfam14729, DUF4467, Domain of unknown function with cystatin-like fold (DUF4467)	NA|417aa|up_7|NZ_AP014652.1_2433133_2434384_+	pfam02388, FemAB, FemAB family	NA|244aa|up_6|NZ_AP014652.1_2434480_2435212_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|240aa|up_5|NZ_AP014652.1_2435208_2435928_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|260aa|up_4|NZ_AP014652.1_2435908_2436688_-	cd13711, PBP2_Ngo0372_TcyA, Substrate binding domain of ABC transporters involved in cystine import; the type 2 periplasmic binding protein fold	NA|480aa|up_3|NZ_AP014652.1_2436808_2438248_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|35aa|up_2|NZ_AP014652.1_2438421_2438526_+	NA	NA|229aa|up_1|NZ_AP014652.1_2438679_2439366_-	PRK14119, gpmA, phosphoglyceromutase; Provisional	NA|289aa|up_0|NZ_AP014652.1_2439692_2440559_-	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]	NA|35aa|down_0|NZ_AP014652.1_2441112_2441217_-	NA	NA|437aa|down_1|NZ_AP014652.1_2441311_2442622_+	pfam11621, Sbi-IV, C3 binding domain 4 of IgG-bind protein SBI	NA|310aa|down_2|NZ_AP014652.1_2443156_2444086_+	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family	NA|316aa|down_3|NZ_AP014652.1_2444652_2445600_+	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family	NA|326aa|down_4|NZ_AP014652.1_2445601_2446579_+	TIGR01002, synergohymenotropic_toxin, beta-channel forming cytolysin	NA|156aa|down_5|NZ_AP014652.1_2446630_2447098_-	pfam06177, QueT, QueT transporter	NA|231aa|down_6|NZ_AP014652.1_2447108_2447801_-	COG1424, BioW, Pimeloyl-CoA synthetase [Coenzyme metabolism]	NA|372aa|down_7|NZ_AP014652.1_2447811_2448927_-	COG0156, BioF, 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]	NA|336aa|down_8|NZ_AP014652.1_2448904_2449912_-	PRK06256, PRK06256, biotin synthase; Validated	NA|453aa|down_9|NZ_AP014652.1_2449913_2451272_-	TIGR00508, hypothetical_protein_DESPIG_00326, adenosylmethionine-8-amino-7-oxononanoate transaminase
