The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_AP014724	Sulfurospirillum cavolei strain UCH003	2698323	530571	536993	2698323		Escherichia_phage(50.0%)	7	NA	NA
WP_060825340.1|530571_531576_+	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	46.3	1.1e-78
WP_060825341.1|531572_532460_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	A0A291LA53	Escherichia_phage	63.4	4.8e-105
WP_060825342.1|532456_533032_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	56.0	5.4e-41
WP_060825343.1|533024_533891_+	dTDP-4-dehydrorhamnose reductase	NA	A0A1D8EQE2	Escherichia_phage	41.2	1.1e-42
WP_060825344.1|533890_534907_+	dTDP-glucose 4,6-dehydratase	NA	K7QJG5	Escherichia_phage	46.7	1.2e-78
WP_060825345.1|534903_535713_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_060826916.1|535712_536993_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.5	1.8e-12
>prophage 2
NZ_AP014724	Sulfurospirillum cavolei strain UCH003	2698323	545675	553693	2698323		Micromonas_sp._RCC1109_virus(33.33%)	7	NA	NA
WP_060826917.1|545675_546773_+	CDP-glucose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	25.4	6.5e-11
WP_060825351.1|546769_548554_+	thiamine pyrophosphate-binding protein	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	36.0	4.5e-86
WP_060825352.1|548557_549436_+	acetaldehyde dehydrogenase (acetylating)	NA	E5EQ71	Micromonas_sp._RCC1109_virus	42.8	1.3e-54
WP_060825353.1|549425_550433_+	4-hydroxy-2-oxovalerate aldolase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	43.8	6.5e-74
WP_060825354.1|550434_551436_+	NAD-dependent epimerase/dehydratase family protein	NA	M1GXM0	Acanthocystis_turfacea_Chlorella_virus	25.1	4.7e-16
WP_060825355.1|551432_552356_+	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA	NA
WP_060825356.1|552355_553693_+	lipopolysaccharide biosynthesis protein RfbH	NA	A0A218MN59	uncultured_virus	35.3	5.4e-68
>prophage 3
NZ_AP014724	Sulfurospirillum cavolei strain UCH003	2698323	1276968	1367280	2698323	protease,terminase,plate,tail,tRNA,capsid,transposase	Burkholderia_phage(15.0%)	83	NA	NA
WP_060825872.1|1276968_1278081_-|tRNA	tRNA (uridine(54)-C5)-methyltransferase TrmA	tRNA	A0A167RER2	Powai_lake_megavirus	27.6	2.4e-16
WP_039674538.1|1278290_1279001_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060825873.1|1279011_1280529_-	B12-binding domain-containing radical SAM protein	NA	NA	NA	NA	NA
WP_060825874.1|1280746_1282867_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_060825875.1|1282866_1284213_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_060825876.1|1284226_1292818_-	DUF4347 domain-containing protein	NA	NA	NA	NA	NA
WP_060825877.1|1292835_1293558_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_060825878.1|1293572_1295465_-	TolC family protein	NA	NA	NA	NA	NA
WP_060825879.1|1295735_1296410_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_060825880.1|1296406_1297981_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_060825881.1|1298021_1301045_-	tetrathionate reductase subunit TtrA	NA	NA	NA	NA	NA
WP_060825882.1|1301047_1302172_-	polysulfide reductase NrfD	NA	NA	NA	NA	NA
WP_039674532.1|1302173_1302962_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA	NA
WP_060825883.1|1303041_1304703_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_039674530.1|1304689_1305382_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_039674527.1|1305386_1305878_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_060825884.1|1305936_1308495_-	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA	NA
WP_173636972.1|1308519_1310655_-	DNA translocase FtsK 4TM domain-containing protein	NA	S5VNE3	Mycobacterium_phage	45.1	4.7e-82
WP_060825886.1|1310806_1313440_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039674522.1|1313606_1313888_+	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	50.6	5.2e-13
WP_060825887.1|1313952_1315437_-	inorganic phosphate transporter	NA	NA	NA	NA	NA
WP_060825888.1|1315927_1316629_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144440965.1|1316849_1318035_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	42.1	2.0e-50
WP_060825890.1|1319036_1320299_-	MFS transporter	NA	NA	NA	NA	NA
WP_060825891.1|1320295_1322431_-	bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase	NA	NA	NA	NA	NA
WP_060825892.1|1322433_1322742_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_060825893.1|1322842_1324168_-	dual specificity protein phosphatase family protein	NA	NA	NA	NA	NA
WP_060825894.1|1324170_1325889_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_041961804.1|1325911_1326550_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_144440985.1|1326559_1327492_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_060826954.1|1327488_1328085_-	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA	NA
WP_060825895.1|1328291_1329278_-	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_144440986.1|1329387_1329828_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039674507.1|1329943_1330537_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060825897.1|1330549_1331056_-	META domain-containing protein	NA	NA	NA	NA	NA
WP_039674505.1|1331073_1332771_-	cation:proton antiporter	NA	NA	NA	NA	NA
WP_041961808.1|1332792_1333815_-	bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	35.0	4.0e-55
WP_060825898.1|1334315_1335113_-	DNA adenine methylase	NA	A7YGS0	Campylobacter_phage	53.4	9.7e-73
WP_144440987.1|1335207_1335477_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060825900.1|1335424_1335856_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144440988.1|1335815_1336370_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060825902.1|1336359_1336626_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060825903.1|1336622_1336847_-	hypothetical protein	NA	K4I1E3	Acidithiobacillus_phage	40.0	1.4e-05
WP_158509035.1|1336855_1337746_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060825905.1|1337802_1338006_-|tail	tail protein X	tail	NA	NA	NA	NA
WP_060825906.1|1338002_1338386_-|tail	phage tail protein	tail	NA	NA	NA	NA
WP_060825907.1|1338378_1340376_-|tail	phage tail tape measure protein	tail	E5FFG5	Burkholderia_phage	33.0	2.1e-44
WP_060825908.1|1340505_1340742_-|tail	phage tail assembly protein	tail	Q75QK8	Wolbachia_phage	45.1	3.3e-05
WP_060825909.1|1340751_1341258_-|tail	phage major tail tube protein	tail	NA	NA	NA	NA
WP_060825910.1|1341267_1342383_-|tail	phage tail sheath subtilisin-like domain-containing protein	tail	A7YGH4	Campylobacter_phage	37.2	1.9e-42
WP_060825911.1|1342433_1343006_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060825912.1|1343017_1344058_-	hypothetical protein	NA	A0A2H4PCZ7	Mycobacterium_phage	44.2	4.1e-15
WP_060825913.1|1344057_1344627_-|tail	phage tail protein	tail	NA	NA	NA	NA
WP_060825914.1|1344619_1345690_-|plate	baseplate J/gp47 family protein	plate	R4JDM0	Burkholderia_phage	33.7	1.1e-10
WP_060825915.1|1345689_1345965_-	GPW/gp25 family protein	NA	NA	NA	NA	NA
WP_060825916.1|1345961_1346450_-|plate	phage baseplate assembly protein V	plate	A0A219YA41	Aeromonas_phage	33.3	1.2e-09
WP_060825917.1|1346446_1346689_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060825918.1|1346851_1347295_+	DUF1834 family protein	NA	NA	NA	NA	NA
WP_060825919.1|1347291_1348161_+	hypothetical protein	NA	H7BWC3	unidentified_phage	35.1	5.5e-21
WP_060825920.1|1348157_1348619_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060825921.1|1348631_1349612_+|capsid	major capsid protein	capsid	NA	NA	NA	NA
WP_060825922.1|1349751_1350156_+	DUF1320 family protein	NA	NA	NA	NA	NA
WP_060825923.1|1350145_1350634_+	DUF1804 family protein	NA	NA	NA	NA	NA
WP_082709161.1|1350620_1352363_+|terminase	phage terminase large subunit	terminase	B7SDZ1	Pseudomonas_virus	38.2	1.2e-86
WP_060825924.1|1352359_1353763_+	DUF935 family protein	NA	Q5ZQY4	Pseudomonas_phage	23.2	2.1e-17
WP_082709222.1|1353855_1354917_+	hypothetical protein	NA	Q6QIB9	Burkholderia_phage	42.3	4.2e-31
WP_060825926.1|1355006_1355483_+	phage virion morphogenesis protein	NA	NA	NA	NA	NA
WP_060825927.1|1355479_1355740_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158509036.1|1355815_1356100_-	DUF1018 domain-containing protein	NA	NA	NA	NA	NA
WP_144440965.1|1356129_1357316_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	42.1	2.0e-50
WP_060825928.1|1357801_1358761_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173636955.1|1359041_1359212_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144440989.1|1359214_1359940_+	arginyltransferase	NA	NA	NA	NA	NA
WP_060825929.1|1359996_1360827_+	adenylosuccinate lyase	NA	NA	NA	NA	NA
WP_060825930.1|1360823_1362095_-	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_041961811.1|1362110_1362833_-	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.9	8.9e-25
WP_060825931.1|1362819_1363245_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_060825932.1|1363241_1364225_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	32.5	2.1e-45
WP_039674492.1|1364221_1364470_-	RNA-binding S4 domain-containing protein	NA	NA	NA	NA	NA
WP_060825933.1|1364623_1365850_+	argininosuccinate synthase	NA	NA	NA	NA	NA
WP_039674489.1|1365887_1366286_+	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_039674488.1|1366282_1366729_+	50S ribosomal protein L9	NA	NA	NA	NA	NA
WP_039674486.1|1366734_1367280_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
>prophage 4
NZ_AP014724	Sulfurospirillum cavolei strain UCH003	2698323	1630064	1670289	2698323	head,terminase,integrase,plate,tail,tRNA,capsid,transposase	Burkholderia_phage(17.65%)	53	1629966:1629979	1634354:1634367
1629966:1629979	attL	GCGCGAAGCGATGG	NA	NA	NA	NA
WP_060826155.1|1630064_1632215_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	A0A219VHD4	Ochrobactrum_phage	22.4	7.3e-06
WP_060826156.1|1632281_1632992_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_060826157.1|1633038_1633299_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060826159.1|1633611_1633866_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060826160.1|1633868_1634507_+	DUF3164 family protein	NA	A0A2H4IYN0	uncultured_Caudovirales_phage	34.8	2.3e-24
1634354:1634367	attR	GCGCGAAGCGATGG	NA	NA	NA	NA
WP_060826161.1|1634593_1634821_+	transcriptional regulator	NA	M5A9C2	Nitratiruptor_phage	49.3	1.3e-09
WP_060826162.1|1634916_1635129_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060826163.1|1635139_1635406_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060826164.1|1635402_1636329_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_060826165.1|1636575_1636980_+	DUF1018 domain-containing protein	NA	NA	NA	NA	NA
WP_060825927.1|1637055_1637316_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060825926.1|1637312_1637789_-	phage virion morphogenesis protein	NA	NA	NA	NA	NA
WP_082709222.1|1637878_1638940_-	hypothetical protein	NA	Q6QIB9	Burkholderia_phage	42.3	4.2e-31
WP_060826166.1|1639032_1640436_-	DUF935 family protein	NA	Q5ZQY4	Pseudomonas_phage	23.2	2.1e-17
WP_082709170.1|1640432_1642175_-|terminase	phage terminase large subunit	terminase	A0A076FR23	Pseudomonas_phage	38.1	1.9e-81
WP_060826167.1|1642161_1642425_-	DUF1804 family protein	NA	NA	NA	NA	NA
WP_144440965.1|1642494_1643681_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	42.1	2.0e-50
WP_060826168.1|1643732_1643948_-	DUF1804 family protein	NA	NA	NA	NA	NA
WP_060826169.1|1643937_1644342_-	DUF1320 family protein	NA	NA	NA	NA	NA
WP_060826170.1|1644481_1645468_-|capsid	major capsid protein	capsid	NA	NA	NA	NA
WP_060826171.1|1645480_1645846_-|head	head decoration protein	head	NA	NA	NA	NA
WP_060826172.1|1645857_1646712_-	hypothetical protein	NA	H7BWC3	unidentified_phage	35.1	7.1e-21
WP_060826173.1|1646708_1647152_-	DUF1834 family protein	NA	NA	NA	NA	NA
WP_060826174.1|1647316_1647559_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060826175.1|1647555_1648044_+|plate	phage baseplate assembly protein V	plate	A0A219YA41	Aeromonas_phage	31.2	2.7e-09
WP_060825915.1|1648040_1648316_+	GPW/gp25 family protein	NA	NA	NA	NA	NA
WP_060825914.1|1648315_1649386_+|plate	baseplate J/gp47 family protein	plate	R4JDM0	Burkholderia_phage	33.7	1.1e-10
WP_060825913.1|1649378_1649948_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_060825912.1|1649947_1650988_+	hypothetical protein	NA	A0A2H4PCZ7	Mycobacterium_phage	44.2	4.1e-15
WP_060825911.1|1650999_1651572_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060825910.1|1651622_1652738_+|tail	phage tail sheath subtilisin-like domain-containing protein	tail	A7YGH4	Campylobacter_phage	37.2	1.9e-42
WP_060825909.1|1652747_1653254_+|tail	phage major tail tube protein	tail	NA	NA	NA	NA
WP_060825908.1|1653263_1653500_+|tail	phage tail assembly protein	tail	Q75QK8	Wolbachia_phage	45.1	3.3e-05
WP_060825907.1|1653629_1655627_+|tail	phage tail tape measure protein	tail	E5FFG5	Burkholderia_phage	33.0	2.1e-44
WP_060825906.1|1655619_1656003_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_060825905.1|1655999_1656203_+|tail	tail protein X	tail	NA	NA	NA	NA
WP_158509035.1|1656259_1657150_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060825903.1|1657158_1657383_+	hypothetical protein	NA	K4I1E3	Acidithiobacillus_phage	40.0	1.4e-05
WP_060825902.1|1657379_1657646_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144440988.1|1657635_1658190_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060825900.1|1658149_1658581_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144440987.1|1658528_1658798_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060825898.1|1658892_1659690_+	DNA adenine methylase	NA	A7YGS0	Campylobacter_phage	53.4	9.7e-73
WP_060826176.1|1660773_1661085_-	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA	NA
WP_060826177.1|1661081_1662086_-	type I-B CRISPR-associated endonuclease Cas1	NA	NA	NA	NA	NA
WP_060826178.1|1662109_1662922_-	antirepressor	NA	NA	NA	NA	NA
WP_060826179.1|1662931_1663426_-	CRISPR-associated protein Cas4	NA	NA	NA	NA	NA
WP_060826180.1|1663422_1665627_-	CRISPR-associated helicase/endonuclease Cas3	NA	A0A2R2ZGW0	Clostridioides_phage	26.3	4.4e-22
WP_060826181.1|1665626_1666340_-	CRISPR-associated protein Cas5	NA	NA	NA	NA	NA
WP_060826182.1|1666341_1667262_-	type I-B CRISPR-associated protein Cas7/Cst2/DevR	NA	NA	NA	NA	NA
WP_060826183.1|1667274_1668978_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060826184.1|1668974_1669691_-	CRISPR-associated endoribonuclease Cas6	NA	NA	NA	NA	NA
WP_060826963.1|1669809_1670289_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
