assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001547915.1_ASM154791v1	NZ_AP014628	Pseudomonas sp. St29	1	2799376-2799467	1	CRISPRCasFinder	no		DEDDh,DinG,csa3,cas3,PD-DExK,WYL,RT	Orphan	CGTAGGAGCTGGCTTGCCAGCGAAGCGGCCC	31	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,cas3,PD-DExK,WYL,RT	NA|115aa|up_8|NZ_AP014628.1_2788823_2789168_+,NA|110aa|up_7|NZ_AP014628.1_2790065_2790395_-,NA|99aa|up_4|NZ_AP014628.1_2793702_2793999_-,NA|312aa|down_2|NZ_AP014628.1_2802221_2803157_-,NA|140aa|down_3|NZ_AP014628.1_2803275_2803695_-,NA|125aa|down_6|NZ_AP014628.1_2806113_2806488_+	NA|105aa|up_9|NZ_AP014628.1_2788435_2788750_+	cd03707, EFTU_III, Domain III of Elongation Factor (EF) Tu	NA|115aa|up_8|NZ_AP014628.1_2788823_2789168_+	NA	NA|110aa|up_7|NZ_AP014628.1_2790065_2790395_-	NA	NA|787aa|up_6|NZ_AP014628.1_2790964_2793325_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|110aa|up_5|NZ_AP014628.1_2793331_2793661_-	cd06990, cupin_DUF861, domain of unknown function DUF 861, cupin domain	NA|99aa|up_4|NZ_AP014628.1_2793702_2793999_-	NA	NA|480aa|up_3|NZ_AP014628.1_2794280_2795720_+	pfam08548, Peptidase_M10_C, Peptidase M10 serralysin C terminal	NA|201aa|up_2|NZ_AP014628.1_2795849_2796452_+	pfam14433, SUKH-3, SUKH-3 immunity protein	NA|250aa|up_1|NZ_AP014628.1_2796606_2797356_-	COG4278, COG4278, Uncharacterized conserved protein [Function unknown]	NA|541aa|up_0|NZ_AP014628.1_2797642_2799265_-	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|549aa|down_0|NZ_AP014628.1_2799541_2801188_-	PRK02106, PRK02106, choline dehydrogenase; Validated	NA|298aa|down_1|NZ_AP014628.1_2801321_2802215_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|312aa|down_2|NZ_AP014628.1_2802221_2803157_-	NA	NA|140aa|down_3|NZ_AP014628.1_2803275_2803695_-	NA	NA|516aa|down_4|NZ_AP014628.1_2803792_2805340_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|211aa|down_5|NZ_AP014628.1_2805450_2806083_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|125aa|down_6|NZ_AP014628.1_2806113_2806488_+	NA	NA|471aa|down_7|NZ_AP014628.1_2806516_2807929_-	PRK10337, PRK10337, sensor protein QseC; Provisional	NA|221aa|down_8|NZ_AP014628.1_2807925_2808588_-	PRK10643, PRK10643, two-component system response regulator PmrA	NA|215aa|down_9|NZ_AP014628.1_2808610_2809255_-	TIGR02521, Uncharacterized_protein_HI_0366, type IV pilus biogenesis/stability protein PilW
GCF_001547915.1_ASM154791v1	NZ_AP014628	Pseudomonas sp. St29	2	3749339-3749431	2	CRISPRCasFinder	no		DEDDh,DinG,csa3,cas3,PD-DExK,WYL,RT	Orphan	GGGGTACATATCCGTTGCTGCGGGTGCGGC	30	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,cas3,PD-DExK,WYL,RT	NA|187aa|up_6|NZ_AP014628.1_3730183_3730744_+,NA	NA|677aa|up_9|NZ_AP014628.1_3725943_3727974_+	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein	NA|391aa|up_8|NZ_AP014628.1_3728020_3729193_+	pfam01551, Peptidase_M23, Peptidase family M23	NA|316aa|up_7|NZ_AP014628.1_3729249_3730197_+	COG3179, COG3179, Predicted chitinase [General function prediction only]	NA|187aa|up_6|NZ_AP014628.1_3730183_3730744_+	NA	NA|136aa|up_5|NZ_AP014628.1_3730942_3731350_+	cd09105, PLDc_vPLD1_2_like_2, Catalytic domain, repeat 2, of vertebrate phospholipases, PLD1 and PLD2, and similar proteins	NA|304aa|up_4|NZ_AP014628.1_3731330_3732242_+	sd00010, SLR, Sel1-like repeat	NA|4125aa|up_3|NZ_AP014628.1_3732370_3744745_-	pfam12545, DUF3739, Filamentous haemagglutinin family outer membrane protein	NA|388aa|up_2|NZ_AP014628.1_3744960_3746124_-	cd13565, PBP2_PstS, Substrate binding domain of ABC-type phosphate transporter, a member of the type 2 periplasmic-binding fold superfamily	NA|404aa|up_1|NZ_AP014628.1_3746677_3747889_-	TIGR02120, Putative_general_secretion_pathway_protein_F, type II secretion system protein F	NA|477aa|up_0|NZ_AP014628.1_3747888_3749319_-	TIGR02533, Type_II_secretion_system_protein_E, type II secretion system protein E	NA|796aa|down_0|NZ_AP014628.1_3750402_3752790_-	TIGR02517, Putative_type_II_secretion_system_protein_D, type II secretion system protein D	NA|187aa|down_1|NZ_AP014628.1_3752786_3753347_-	pfam04612, T2SSM, Type II secretion system (T2SS), protein M	NA|396aa|down_2|NZ_AP014628.1_3753339_3754527_-	TIGR01709, Type_II_secretion_system_protein_L, type II secretion system protein L	NA|328aa|down_3|NZ_AP014628.1_3754523_3755507_-	pfam03934, T2SSK, Type II secretion system (T2SS), protein K	NA|149aa|down_4|NZ_AP014628.1_3755515_3755962_-	TIGR01710, Type_II_secretion_system_protein_G, type II secretion system protein G	NA|129aa|down_5|NZ_AP014628.1_3756110_3756497_+	TIGR01707, Type_II_secretion_system_protein_I, type II secretion system protein I	NA|143aa|down_6|NZ_AP014628.1_3756500_3756929_-	pfam11356, T2SSC, Type II secretion system protein C	NA|154aa|down_7|NZ_AP014628.1_3757059_3757521_+	TIGR01708, Type_II_secretion_system_protein_H, type II secretion system protein H	NA|204aa|down_8|NZ_AP014628.1_3757517_3758129_+	COG4795, PulJ, Type II secretory pathway, component PulJ [Intracellular trafficking and secretion]	NA|317aa|down_9|NZ_AP014628.1_3758324_3759275_-	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms]
GCF_001547915.1_ASM154791v1	NZ_AP014628	Pseudomonas sp. St29	3	4318803-4318928	3	CRISPRCasFinder	no		DEDDh,DinG,csa3,cas3,PD-DExK,WYL,RT	Orphan	TCGCATCGTCGCACCTGCCGCATCGTCG	28	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,cas3,PD-DExK,WYL,RT	NA|104aa|up_9|NZ_AP014628.1_4310197_4310509_-,NA|343aa|down_2|NZ_AP014628.1_4321058_4322087_+,NA|228aa|down_3|NZ_AP014628.1_4322239_4322923_+,NA|343aa|down_4|NZ_AP014628.1_4323055_4324084_+	NA|104aa|up_9|NZ_AP014628.1_4310197_4310509_-	NA	NA|100aa|up_8|NZ_AP014628.1_4310601_4310901_+	pfam07119, DUF1375, Protein of unknown function (DUF1375)	NA|116aa|up_7|NZ_AP014628.1_4311006_4311354_+	pfam07119, DUF1375, Protein of unknown function (DUF1375)	NA|258aa|up_6|NZ_AP014628.1_4311396_4312170_-	cd01948, EAL, EAL domain	NA|334aa|up_5|NZ_AP014628.1_4312418_4313420_+	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|173aa|up_4|NZ_AP014628.1_4313477_4313996_-	COG4875, COG4875, Uncharacterized protein conserved in bacteria with a cystatin-like fold [Function unknown]	NA|388aa|up_3|NZ_AP014628.1_4314168_4315332_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|223aa|up_2|NZ_AP014628.1_4315328_4315997_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|776aa|up_1|NZ_AP014628.1_4315993_4318321_+	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|151aa|up_0|NZ_AP014628.1_4318317_4318770_+	cd17551, REC_RpfG-like, phosphoacceptor receiver (REC) domain of cyclic di-GMP phosphodiesterase response regulator RpfG and similar proteins	NA|266aa|down_0|NZ_AP014628.1_4319080_4319878_-	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain	NA|333aa|down_1|NZ_AP014628.1_4319963_4320962_+	pfam13593, SBF_like, SBF-like CPA transporter family (DUF4137)	NA|343aa|down_2|NZ_AP014628.1_4321058_4322087_+	NA	NA|228aa|down_3|NZ_AP014628.1_4322239_4322923_+	NA	NA|343aa|down_4|NZ_AP014628.1_4323055_4324084_+	NA	NA|207aa|down_5|NZ_AP014628.1_4324273_4324894_+	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|297aa|down_6|NZ_AP014628.1_4324906_4325797_-	cd08442, PBP2_YofA_SoxR_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators, YofA and SoxR, contains the type 2 periplasmic binding fold	NA|464aa|down_7|NZ_AP014628.1_4325885_4327277_+	PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional	NA|83aa|down_8|NZ_AP014628.1_4327543_4327792_+	pfam03869, Arc, Arc-like DNA binding domain	NA|727aa|down_9|NZ_AP014628.1_4328035_4330216_+	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor
GCF_001547915.1_ASM154791v1	NZ_AP014628	Pseudomonas sp. St29	4	5453365-5453465	4	CRISPRCasFinder	no		DEDDh,DinG,csa3,cas3,PD-DExK,WYL,RT	Orphan	GCCATTAGTAATACGCACGGACT	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,cas3,PD-DExK,WYL,RT	NA|492aa|up_8|NZ_AP014628.1_5445787_5447263_+,NA|81aa|up_7|NZ_AP014628.1_5447343_5447586_-,NA|367aa|up_6|NZ_AP014628.1_5447815_5448916_-,NA|63aa|up_2|NZ_AP014628.1_5451105_5451294_+,NA|107aa|up_0|NZ_AP014628.1_5452879_5453200_+,NA|293aa|down_3|NZ_AP014628.1_5457699_5458578_+,NA|183aa|down_7|NZ_AP014628.1_5463616_5464165_-	NA|295aa|up_9|NZ_AP014628.1_5444125_5445010_-	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|492aa|up_8|NZ_AP014628.1_5445787_5447263_+	NA	NA|81aa|up_7|NZ_AP014628.1_5447343_5447586_-	NA	NA|367aa|up_6|NZ_AP014628.1_5447815_5448916_-	NA	NA|124aa|up_5|NZ_AP014628.1_5449004_5449376_-	PRK13877, PRK13877, conjugal transfer transcriptional regulator TraJ	NA|122aa|up_4|NZ_AP014628.1_5449677_5450043_+	pfam17273, DUF5338, Family of unknown function (DUF5338)	NA|263aa|up_3|NZ_AP014628.1_5450314_5451103_+	TIGR02780, TrbJ_protein, P-type conjugative transfer protein TrbJ	NA|63aa|up_2|NZ_AP014628.1_5451105_5451294_+	NA	NA|527aa|up_1|NZ_AP014628.1_5451296_5452877_+	TIGR02783, probable_conjugal_transfer_protein_TrbL, P-type conjugative transfer protein TrbL	NA|107aa|up_0|NZ_AP014628.1_5452879_5453200_+	NA	NA|73aa|down_0|NZ_AP014628.1_5454906_5455125_-	pfam05930, Phage_AlpA, Prophage CP4-57 regulatory protein (AlpA)	NA|317aa|down_1|NZ_AP014628.1_5455207_5456158_+	TIGR00721, Tfx_protein, DNA-binding protein, Tfx family	NA|270aa|down_2|NZ_AP014628.1_5456239_5457049_+	pfam04471, Mrr_cat, Restriction endonuclease	NA|293aa|down_3|NZ_AP014628.1_5457699_5458578_+	NA	NA|404aa|down_4|NZ_AP014628.1_5458829_5460041_-	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain	NA|526aa|down_5|NZ_AP014628.1_5460348_5461926_-	PRK00074, guaA, GMP synthase; Reviewed	NA|490aa|down_6|NZ_AP014628.1_5462030_5463500_-	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed	NA|183aa|down_7|NZ_AP014628.1_5463616_5464165_-	NA	NA|257aa|down_8|NZ_AP014628.1_5464295_5465066_-	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|316aa|down_9|NZ_AP014628.1_5465168_5466116_+	cd08414, PBP2_LTTR_aromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators involved in the catabolism of aromatic compounds and that of other related regulators, contains type 2 periplasmic binding fold
