The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_AP013044	Tannerella forsythia 3313	3350939	652639	680470	3350939	tail,terminase,capsid,portal,holin	Riemerella_phage(62.5%)	31	NA	NA
WP_060827341.1|652639_653107_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_060827342.1|653114_653942_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060827343.1|653946_654231_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060827344.1|654250_657382_-|tail	phage tail protein	tail	F5A399	Riemerella_phage	37.2	3.3e-124
WP_060827345.1|657384_657807_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060828542.1|657964_658369_-	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA	NA
WP_060827346.1|658498_658903_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060827347.1|658985_659171_-	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA	NA
WP_060827348.1|659320_659578_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060827349.1|659574_660378_-	phage antirepressor KilAC domain-containing protein	NA	F5A3A8	Riemerella_phage	41.7	8.4e-16
WP_060827350.1|660667_660910_+	DUF4160 domain-containing protein	NA	NA	NA	NA	NA
WP_060827351.1|660912_661320_+	DUF2442 domain-containing protein	NA	NA	NA	NA	NA
WP_060827352.1|661427_661937_+	SocA family protein	NA	NA	NA	NA	NA
WP_060827353.1|661933_662395_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060827354.1|662544_663363_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060827355.1|663420_667398_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060827356.1|667611_668187_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060827357.1|668273_668753_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060827358.1|668765_669179_-	hypothetical protein	NA	F5A3B2	Riemerella_phage	28.0	8.2e-07
WP_070098939.1|669175_669637_-	hypothetical protein	NA	F5A3B3	Riemerella_phage	40.3	1.1e-20
WP_060827360.1|669627_669963_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060827361.1|669964_670279_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060827362.1|670344_671451_-|capsid	major capsid protein	capsid	NA	NA	NA	NA
WP_060827363.1|671471_672032_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060827364.1|672050_672761_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060827366.1|673172_673949_+	ADP-ribosylglycohydrolase family protein	NA	A0A1S6UB21	Serratia_phage	26.3	1.6e-11
WP_060827367.1|673945_674281_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060827368.1|674273_676844_-	hypothetical protein	NA	F5A3C5	Riemerella_phage	32.4	7.0e-48
WP_060827369.1|676885_678349_-|portal	phage portal protein	portal	NA	NA	NA	NA
WP_081094369.1|678377_679844_-|terminase	phage terminase large subunit	terminase	H2A0E8	Bacteroides_phage	43.1	3.0e-88
WP_060827370.1|679840_680470_-|terminase	terminase small subunit	terminase	E1ABZ9	Pseudoalteromonas_phage	40.3	1.4e-05
>prophage 2
NZ_AP013044	Tannerella forsythia 3313	3350939	1311440	1403823	3350939	protease,transposase,tRNA,integrase	Catovirus(12.5%)	60	1401460:1401475	1404840:1404855
WP_060827659.1|1311440_1314071_+|protease	zinc-dependent metalloprotease	protease	NA	NA	NA	NA
WP_060827660.1|1314107_1317443_+	SusC/RagA family TonB-linked outer membrane protein	NA	NA	NA	NA	NA
WP_046824781.1|1317456_1318806_+	RagB/SusD family nutrient uptake outer membrane protein	NA	NA	NA	NA	NA
WP_060828572.1|1319131_1321123_-	OmpA family protein	NA	NA	NA	NA	NA
WP_060828573.1|1321159_1322377_-|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
WP_060827661.1|1322429_1326506_-	response regulator	NA	NA	NA	NA	NA
WP_060827662.1|1326746_1328597_+	alpha-1,3-galactosidase B	NA	NA	NA	NA	NA
WP_060828574.1|1328703_1330176_-|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	26.7	5.3e-40
WP_046824762.1|1330295_1331021_+	3-oxoacyl-ACP reductase FabG	NA	M1NMS3	Moumouvirus	33.3	2.9e-07
WP_014224678.1|1331104_1331350_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060827663.1|1331351_1332260_+	lysophospholipid acyltransferase family protein	NA	NA	NA	NA	NA
WP_060827664.1|1332237_1333323_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_060827665.1|1333344_1333800_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046824765.1|1333810_1334236_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_060827666.1|1334232_1335420_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060827667.1|1335416_1336049_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046824767.1|1336067_1336325_+	acyl carrier protein	NA	NA	NA	NA	NA
WP_155642414.1|1336464_1340976_-	hypothetical protein	NA	NA	NA	NA	NA
WP_155642415.1|1341037_1342129_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172794524.1|1342545_1343511_+	DUF5106 domain-containing protein	NA	NA	NA	NA	NA
WP_046824771.1|1343516_1344080_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA	NA
WP_014224689.1|1344163_1344385_+	DUF2795 domain-containing protein	NA	NA	NA	NA	NA
WP_014224690.1|1344488_1345481_+	PorP/SprF family type IX secretion system membrane protein	NA	NA	NA	NA	NA
WP_041591152.1|1345514_1346954_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	NA	NA	NA	NA
WP_081094390.1|1346986_1348075_+	gliding motility protein GldL	NA	NA	NA	NA	NA
WP_060827672.1|1348126_1349692_+	gliding motility protein GldM	NA	NA	NA	NA	NA
WP_014224694.1|1349720_1350833_+	gliding motility protein GldN	NA	NA	NA	NA	NA
WP_060827673.1|1350846_1351488_-	WbqC family protein	NA	NA	NA	NA	NA
WP_060827674.1|1351491_1352343_-	signal peptidase I	NA	NA	NA	NA	NA
WP_060827675.1|1352366_1353776_-	signal peptidase I	NA	NA	NA	NA	NA
WP_014224698.1|1353792_1354524_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA	NA
WP_014224699.1|1354635_1355910_+	DUF2851 family protein	NA	NA	NA	NA	NA
WP_046472645.1|1356002_1357892_+	Ig-like domain-containing protein	NA	NA	NA	NA	NA
WP_081094391.1|1357938_1358715_+	DUF3108 domain-containing protein	NA	NA	NA	NA	NA
WP_060827676.1|1358797_1359703_+|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	E9P639	Wolbachia_endosymbiont_wVitB_of_Nasonia_vitripennis_phage	30.3	7.5e-21
WP_155642416.1|1360029_1365477_+	T9SS type A sorting domain-containing protein	NA	NA	NA	NA	NA
WP_014224706.1|1365733_1366333_+	glutathione peroxidase	NA	NA	NA	NA	NA
WP_014224707.1|1366632_1367196_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_060827678.1|1367195_1368128_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_014224709.1|1368139_1369465_-	dNTP triphosphohydrolase	NA	NA	NA	NA	NA
WP_046825289.1|1369925_1372946_+	SusC/RagA family TonB-linked outer membrane protein	NA	NA	NA	NA	NA
WP_014224710.1|1372962_1374615_+	SusD/RagB family nutrient-binding outer membrane lipoprotein	NA	NA	NA	NA	NA
WP_060827679.1|1375247_1376459_-	acetate kinase	NA	NA	NA	NA	NA
WP_014224712.1|1376455_1377475_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_014224713.1|1377528_1378302_-	TIGR00159 family protein	NA	NA	NA	NA	NA
WP_014224714.1|1378311_1379154_-	dihydropteroate synthase	NA	NA	NA	NA	NA
WP_060827680.1|1379231_1380527_+	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA	NA
WP_155642500.1|1380841_1382107_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_087879682.1|1382331_1383558_-	U32 family peptidase	NA	Q6DW11	Phage_TP	25.6	9.9e-16
WP_014224718.1|1383599_1384532_-	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_060827682.1|1385329_1385983_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041590984.1|1386867_1388181_-|transposase	IS1380 family transposase	transposase	NA	NA	NA	NA
WP_060827683.1|1388488_1389502_-	virulence RhuM family protein	NA	Q9JMN3	Wolbachia_phage	45.7	2.3e-71
WP_060828576.1|1389562_1392670_-	type I restriction endonuclease subunit R	NA	NA	NA	NA	NA
WP_060827684.1|1392666_1393842_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_060827685.1|1395053_1396601_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	42.0	3.3e-101
WP_060827686.1|1396964_1397255_+	DUF3853 family protein	NA	NA	NA	NA	NA
WP_155642501.1|1398575_1399257_+|transposase	IS1 family transposase	transposase	NA	NA	NA	NA
1401460:1401475	attL	AATATTATCCAAAGTG	NA	NA	NA	NA
WP_060827689.1|1401590_1402823_+|integrase	tyrosine-type recombinase/integrase	integrase	Q20DH2	Lactobacillus_phage	29.0	4.9e-07
WP_046824653.1|1402815_1403823_+|integrase	tyrosine-type recombinase/integrase	integrase	S5MBZ0	Brevibacillus_phage	21.5	3.4e-06
1404840:1404855	attR	AATATTATCCAAAGTG	NA	NA	NA	NA
>prophage 3
NZ_AP013044	Tannerella forsythia 3313	3350939	1998229	2075734	3350939	integrase,transposase	Mycobacterium_phage(10.0%)	57	2035230:2035289	2075735:2075896
WP_060827895.1|1998229_1999129_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1I9SC88	Mycobacterium_phage	29.7	8.3e-12
WP_014225268.1|1999140_1999440_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA	NA
WP_014225269.1|1999856_2001044_+	elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	26.4	4.0e-14
WP_014225270.1|2001181_2001370_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_014225271.1|2001381_2001924_+	transcription termination/antitermination factor NusG	NA	NA	NA	NA	NA
WP_014225272.1|2001985_2002432_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_014225273.1|2002446_2003142_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_014225274.1|2003164_2003692_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
WP_014225275.1|2003734_2004109_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
WP_014225276.1|2004225_2008038_+	DNA-directed RNA polymerase subunit beta	NA	E3T4Z4	Cafeteria_roenbergensis_virus	24.7	6.8e-31
WP_014225277.1|2008066_2012344_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	26.5	6.4e-70
WP_060827896.1|2012368_2013904_+	DUF853 family protein	NA	A0A248XCZ8	Klebsiella_phage	41.7	4.8e-76
WP_060828603.1|2014325_2015444_+	isochorismate synthase	NA	NA	NA	NA	NA
WP_060827897.1|2015443_2017177_+	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase	NA	NA	NA	NA	NA
WP_021679043.1|2017195_2018020_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA	NA
WP_060827898.1|2018019_2019090_+	o-succinylbenzoate synthase	NA	NA	NA	NA	NA
WP_060827899.1|2019113_2020163_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_060827901.1|2021318_2022545_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_060827902.1|2022593_2025224_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060827903.1|2025408_2028120_+	DEAD/DEAH box helicase family protein	NA	A0A2I7SC38	Paenibacillus_phage	24.1	7.8e-13
WP_060827904.1|2028123_2029545_+	SAM-dependent DNA methyltransferase	NA	A0A220A2U4	Liberibacter_phage	27.3	1.0e-27
WP_060827905.1|2029550_2030711_+	DUF1016 family protein	NA	A0A0U2BZN7	Salmonella_phage	35.3	1.5e-18
WP_060828604.1|2030901_2032089_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_046472573.1|2032418_2033771_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_060827268.1|2034059_2035229_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
2035230:2035289	attL	ACAATATGTCAACGAACTCCTGATATTTTAGACGCCCTAATGGGCGGCCAACCCCATGGG	NA	NA	NA	NA
WP_099046133.1|2036776_2036980_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_060827907.1|2037039_2037687_-	hypothetical protein	NA	NA	NA	NA	NA
WP_141728777.1|2038126_2038495_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046472589.1|2038504_2038867_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041590817.1|2039069_2039369_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_060827908.1|2039305_2040196_-	DUF4372 domain-containing protein	NA	NA	NA	NA	NA
WP_060827909.1|2040312_2041158_+	trypsin-like peptidase domain-containing protein	NA	A0A2H4JE36	uncultured_Caudovirales_phage	37.2	3.1e-37
WP_014225300.1|2041508_2042453_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_060827910.1|2042484_2043318_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	29.6	1.3e-22
WP_060827911.1|2043336_2045313_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014225303.1|2045318_2046062_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_060827912.1|2046168_2049369_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081094402.1|2049278_2050877_+	translocation/assembly module TamB domain-containing protein	NA	NA	NA	NA	NA
WP_060827914.1|2050869_2053179_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_060827915.1|2053267_2055763_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060827916.1|2056102_2056915_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_070098983.1|2056917_2058342_+	hypothetical protein	NA	NA	NA	NA	NA
WP_155642572.1|2058613_2059597_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060831211.1|2059586_2060402_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_060827919.1|2060398_2061661_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_081094404.1|2061682_2061946_+	acyltransferase	NA	NA	NA	NA	NA
WP_081094405.1|2062008_2063352_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_060827921.1|2063346_2064480_-	DUF1972 domain-containing protein	NA	NA	NA	NA	NA
WP_060827922.1|2064496_2064970_-	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_041590822.1|2065168_2065540_+	DUF4783 domain-containing protein	NA	NA	NA	NA	NA
WP_014225316.1|2065563_2066412_+	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA	NA
WP_060827923.1|2066436_2067558_+	carboxypeptidase-like regulatory domain-containing protein	NA	NA	NA	NA	NA
WP_172794529.1|2067500_2069129_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060827925.1|2069137_2069710_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_060827926.1|2069731_2070436_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_060827927.1|2070789_2073045_-	leucine-rich repeat protein	NA	NA	NA	NA	NA
WP_060827268.1|2074564_2075734_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
2075735:2075896	attR	ACAATATGTCAACGAACTCCTGATATTTTAGACGCCCTAATGGGCGGCCAACCCCATGGGGTTGTAAACGAACTGCTGATACAGTTCCCGGATTAAGATGTCAACGAACTGCTGACACACTTTTGTCGCTTAAAAATGTCAACGAACTGCTGATACATAACA	NA	NA	NA	NA
>prophage 4
NZ_AP013044	Tannerella forsythia 3313	3350939	3149174	3187318	3350939	transposase,tail	Wolbachia_phage(20.0%)	30	NA	NA
WP_060828385.1|3149174_3149456_+|transposase	IS110 family transposase	transposase	Q9JMN8	Wolbachia_phage	39.8	1.5e-12
WP_155642479.1|3149506_3149749_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_155642480.1|3149732_3150518_-|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	41.1	1.2e-14
WP_041590952.1|3150897_3151104_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060828386.1|3151106_3151532_-	hypothetical protein	NA	NA	NA	NA	NA
WP_155642481.1|3151534_3152116_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081094444.1|3152741_3156347_+	DNA methylase	NA	A0A248SL14	Klebsiella_phage	30.3	1.0e-129
WP_097531559.1|3156524_3157121_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_060828663.1|3157963_3159094_+	beta-ketoacyl-ACP synthase III	NA	NA	NA	NA	NA
WP_060828388.1|3159117_3161370_+	RND family transporter	NA	NA	NA	NA	NA
WP_021644789.1|3161366_3162101_+	outer membrane lipoprotein-sorting protein	NA	NA	NA	NA	NA
WP_060828389.1|3162112_3163519_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021665022.1|3163573_3166003_+	DVUA0089 family protein	NA	NA	NA	NA	NA
WP_014226283.1|3166013_3166541_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060828390.1|3166625_3167273_+	HAD family hydrolase	NA	NA	NA	NA	NA
WP_081094445.1|3167265_3168705_-	putative DNA binding domain-containing protein	NA	A0A1B3AYT3	Gordonia_phage	26.9	2.0e-23
WP_041590537.1|3168846_3169782_-|transposase	IS1595-like element ISTfo1 family transposase	transposase	NA	NA	NA	NA
WP_097531402.1|3169907_3170075_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_060828391.1|3170174_3171500_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_013815645.1|3171556_3171751_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_172793902.1|3173375_3174362_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_060828392.1|3174612_3176958_-	TonB-dependent receptor family protein	NA	NA	NA	NA	NA
WP_060828393.1|3176969_3178349_-	SPASM domain-containing protein	NA	NA	NA	NA	NA
WP_070098994.1|3180734_3181535_-	DNA adenine methylase	NA	Q0SPG6	Clostridium_phage	32.4	4.6e-22
WP_060828395.1|3181739_3182933_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060828396.1|3182943_3183285_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060828397.1|3183291_3183615_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060828398.1|3183620_3183890_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060828399.1|3183898_3184180_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060828400.1|3184189_3187318_-|tail	phage tail protein	tail	NA	NA	NA	NA
