assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001543265.1_ASM154326v1	NZ_CP013861	Pseudomonas fragi strain P121 chromosome, complete genome	1	1036828-1036920	1	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,WYL	Orphan	TGTAGGAGCGAGCTTGCCTCGCGA	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,WYL	NA|62aa|up_8|NZ_CP013861.1_1025464_1025650_+,NA|104aa|up_7|NZ_CP013861.1_1026275_1026587_-,NA|487aa|up_6|NZ_CP013861.1_1027088_1028549_-,NA|533aa|up_5|NZ_CP013861.1_1028545_1030144_-,NA|218aa|down_9|NZ_CP013861.1_1050672_1051326_+	NA|395aa|up_9|NZ_CP013861.1_1024078_1025263_+	smart00974, T5orf172, This entry represents the putative helicase A859L	NA|62aa|up_8|NZ_CP013861.1_1025464_1025650_+	NA	NA|104aa|up_7|NZ_CP013861.1_1026275_1026587_-	NA	NA|487aa|up_6|NZ_CP013861.1_1027088_1028549_-	NA	NA|533aa|up_5|NZ_CP013861.1_1028545_1030144_-	NA	NA|292aa|up_4|NZ_CP013861.1_1031190_1032066_-	cd08438, PBP2_CidR, The C-terminal substrate binding domain of LysR-like transcriptional regulator CidR, contains the type 2 periplasmic binding fold	NA|380aa|up_3|NZ_CP013861.1_1032198_1033338_+	PRK11197, lldD, L-lactate dehydrogenase; Provisional	NA|343aa|up_2|NZ_CP013861.1_1033351_1034380_+	COG1289, COG1289, Predicted membrane protein [Function unknown]	NA|459aa|up_1|NZ_CP013861.1_1034948_1036325_+	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism]	NA|163aa|up_0|NZ_CP013861.1_1036324_1036813_+	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|319aa|down_0|NZ_CP013861.1_1036981_1037938_-	PRK15068, PRK15068, tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA|248aa|down_1|NZ_CP013861.1_1037934_1038678_-	TIGR00740, tRNA_cmo5U34-methyltransferase, tRNA (cmo5U34)-methyltransferase	NA|114aa|down_2|NZ_CP013861.1_1038791_1039133_-	pfam07947, YhhN, YhhN family	NA|131aa|down_3|NZ_CP013861.1_1039747_1040140_-	pfam09394, Inhibitor_I42, Chagasin family peptidase inhibitor I42	NA|810aa|down_4|NZ_CP013861.1_1040376_1042806_-	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]	NA|806aa|down_5|NZ_CP013861.1_1043005_1045423_-	TIGR03074, PQQ_membr_DH, membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family	NA|461aa|down_6|NZ_CP013861.1_1045553_1046936_-	COG3659, OprB, Carbohydrate-selective porin [Cell envelope biogenesis, outer membrane]	NA|679aa|down_7|NZ_CP013861.1_1048161_1050198_-	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|77aa|down_8|NZ_CP013861.1_1050419_1050650_+	pfam09905, VF530, DNA-binding protein VF530	NA|218aa|down_9|NZ_CP013861.1_1050672_1051326_+	NA
GCF_001543265.1_ASM154326v1	NZ_CP013861	Pseudomonas fragi strain P121 chromosome, complete genome	2	1937017-1937140	2	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,WYL	Orphan	GCGAGCTGTTGCGATTTGCGCTGAAAAGCTCG	32	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,WYL	NA|137aa|up_0|NZ_CP013861.1_1936577_1936988_+,NA	NA|351aa|up_9|NZ_CP013861.1_1922712_1923765_+	cd19094, AKR_Tas-like, Escherichia coli Tas protein and similar proteins	NA|562aa|up_8|NZ_CP013861.1_1924046_1925732_+	cd08492, PBP2_NikA_DppA_OppA_like_15, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|327aa|up_7|NZ_CP013861.1_1925745_1926726_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|288aa|up_6|NZ_CP013861.1_1926722_1927586_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|571aa|up_5|NZ_CP013861.1_1927582_1929295_+	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|403aa|up_4|NZ_CP013861.1_1929319_1930528_+	cd01163, DszC, Dibenzothiophene (DBT) desulfurization enzyme C	NA|471aa|up_3|NZ_CP013861.1_1930586_1931999_-	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family	NA|389aa|up_2|NZ_CP013861.1_1931982_1933149_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|1074aa|up_1|NZ_CP013861.1_1933138_1936360_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|137aa|up_0|NZ_CP013861.1_1936577_1936988_+	NA	NA|470aa|down_0|NZ_CP013861.1_1937698_1939108_-	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|474aa|down_1|NZ_CP013861.1_1939226_1940648_-	TIGR02745, iron-sulfur_cluster-binding_protein, cytochrome c oxidase accessory protein FixG	NA|79aa|down_2|NZ_CP013861.1_1940913_1941150_-	pfam11462, DUF3203, Protein of unknown function (DUF3203)	NA|53aa|down_3|NZ_CP013861.1_1941307_1941466_-	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|666aa|down_4|NZ_CP013861.1_1941680_1943678_+	cd11344, AmyAc_GlgE_like, Alpha amylase catalytic domain found in GlgE-like proteins	NA|1116aa|down_5|NZ_CP013861.1_1943738_1947086_+	TIGR02456, Trehalose_synthase, trehalose synthase	NA|742aa|down_6|NZ_CP013861.1_1947085_1949311_+	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB	NA|267aa|down_7|NZ_CP013861.1_1949545_1950346_-	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only]	NA|234aa|down_8|NZ_CP013861.1_1950407_1951109_-	cd02525, Succinoglycan_BP_ExoA, ExoA is involved in the biosynthesis of succinoglycan	NA|200aa|down_9|NZ_CP013861.1_1951105_1951705_-	pfam05401, NodS, Nodulation protein S (NodS)
GCF_001543265.1_ASM154326v1	NZ_CP013861	Pseudomonas fragi strain P121 chromosome, complete genome	3	4004188-4004294	3	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,WYL	Orphan	ATTAGCGCCTACAAAAACAGTGTGGGAGCTGGC	33	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,WYL	NA,NA|127aa|down_4|NZ_CP013861.1_4010147_4010528_+	NA|290aa|up_9|NZ_CP013861.1_3992133_3993003_-	PRK09377, tsf, elongation factor Ts; Provisional	NA|248aa|up_8|NZ_CP013861.1_3993209_3993953_-	PRK05299, rpsB, 30S ribosomal protein S2; Provisional	NA|288aa|up_7|NZ_CP013861.1_3994244_3995108_+	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|901aa|up_6|NZ_CP013861.1_3995175_3997878_+	PRK00275, glnD, PII uridylyl-transferase; Provisional	NA|400aa|up_5|NZ_CP013861.1_3997904_3999104_+	PRK09147, PRK09147, succinyldiaminopimelate transaminase; Provisional	NA|548aa|up_4|NZ_CP013861.1_3999181_4000825_-	TIGR00831, Putative_Na+/H+_exchanger_Rv2287/MT2345/Mb2309	NA|121aa|up_3|NZ_CP013861.1_4001054_4001417_+	cd03035, ArsC_Yffb, Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC	NA|345aa|up_2|NZ_CP013861.1_4001453_4002488_+	TIGR03536, DapD_gpp, 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA|402aa|up_1|NZ_CP013861.1_4002547_4003753_+	pfam00266, Aminotran_5, Aminotransferase class-V	NA|135aa|up_0|NZ_CP013861.1_4003749_4004154_+	pfam02657, SufE, Fe-S metabolism associated domain	NA|270aa|down_0|NZ_CP013861.1_4004331_4005141_-	COG1179, COG1179, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]	NA|864aa|down_1|NZ_CP013861.1_4005416_4008008_+	cd06435, CESA_NdvC_like, NdvC_like  proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase	NA|384aa|down_2|NZ_CP013861.1_4008106_4009258_+	PRK13009, PRK13009, succinyl-diaminopimelate desuccinylase; Reviewed	NA|270aa|down_3|NZ_CP013861.1_4009257_4010067_+	PRK11088, rrmA, 23S rRNA methyltransferase A; Provisional	NA|127aa|down_4|NZ_CP013861.1_4010147_4010528_+	NA	NA|70aa|down_5|NZ_CP013861.1_4010638_4010848_-	pfam00313, CSD, 'Cold-shock' DNA-binding domain	NA|838aa|down_6|NZ_CP013861.1_4011088_4013602_+	PRK04974, PRK04974, glycerol-3-phosphate 1-O-acyltransferase PlsB	NA|134aa|down_7|NZ_CP013861.1_4013688_4014090_+	pfam09619, YscW, Type III secretion system lipoprotein chaperone (YscW)	NA|1020aa|down_8|NZ_CP013861.1_4014178_4017238_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|367aa|down_9|NZ_CP013861.1_4017243_4018344_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit
GCF_001543265.1_ASM154326v1	NZ_CP013861	Pseudomonas fragi strain P121 chromosome, complete genome	4	4399392-4399750	1	PILER-CR	no		cas3,csa3,DEDDh,DinG,WYL	Orphan	TGTGGGAGCTGGCTTGCCAGGGATTGGCTGTGTGGGCATGCCTTCTCC	48	1	3	4399518-4399547|4399518-4399547|4399518-4399547	NZ_CP013861.1_4399828-4399857|NZ_CP013861.1_4400141-4400170|NZ_CP013861.1_4399985-4400014	NA	4	4	Orphan	cas3,csa3,DEDDh,DinG,WYL	NA,NA	NA|308aa|up_9|NZ_CP013861.1_4385274_4386198_+	cd08426, PBP2_LTTR_like_5, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|518aa|up_8|NZ_CP013861.1_4386377_4387931_-	TIGR03248, galactar-dH20, galactarate dehydratase	NA|455aa|up_7|NZ_CP013861.1_4387942_4389307_-	TIGR00893, Probable_glucarate_transporter, D-galactonate transporter	NA|304aa|up_6|NZ_CP013861.1_4389462_4390374_-	PRK03620, PRK03620, 5-dehydro-4-deoxyglucarate dehydratase; Provisional	NA|249aa|up_5|NZ_CP013861.1_4390748_4391495_-	COG2186, FadR, Transcriptional regulators [Transcription]	NA|259aa|up_4|NZ_CP013861.1_4391607_4392384_-	TIGR02001, gcw_chp, conserved hypothetical protein, proteobacterial	NA|581aa|up_3|NZ_CP013861.1_4392478_4394221_-	COG1574, COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]	NA|433aa|up_2|NZ_CP013861.1_4394298_4395597_-	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	NA|363aa|up_1|NZ_CP013861.1_4395648_4396737_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|453aa|up_0|NZ_CP013861.1_4396790_4398149_-	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|161aa|down_0|NZ_CP013861.1_4400369_4400852_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|209aa|down_1|NZ_CP013861.1_4400988_4401615_+	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|193aa|down_2|NZ_CP013861.1_4406629_4407208_-	pfam02342, TerD, TerD domain	NA|192aa|down_3|NZ_CP013861.1_4407245_4407821_-	pfam02342, TerD, TerD domain	NA|348aa|down_4|NZ_CP013861.1_4407847_4408891_-	TIGR03718, R_switched_Alx, integral membrane protein, TerC family	NA|150aa|down_5|NZ_CP013861.1_4408898_4409348_-	COG3793, TerB, Tellurite resistance protein [Inorganic ion transport and metabolism]	NA|405aa|down_6|NZ_CP013861.1_4409414_4410629_-	COG4110, COG4110, Uncharacterized protein involved in stress response [General function prediction only]	NA|197aa|down_7|NZ_CP013861.1_4410625_4411216_-	pfam02342, TerD, TerD domain	NA|225aa|down_8|NZ_CP013861.1_4411289_4411964_-	cd02612, HAD_PGPPase, phosphatidylglycerol-phosphate phosphatase, similar to Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C	NA|320aa|down_9|NZ_CP013861.1_4411960_4412920_-	pfam15617, C-C_Bond_Lyase, C-C_Bond_Lyase of the TIM-Barrel fold
