The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP014163	Aerococcus urinaehominis strain CCUG42038B chromosome, complete genome	1831400	145843	154839	1831400	transposase	Streptococcus_phage(50.0%)	9	NA	NA
WP_067977260.1|145843_146077_+	hypothetical protein	NA	Q708N8	Streptococcus_phage	38.6	3.0e-06
WP_067977261.1|146063_146432_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA	NA
WP_067977262.1|146576_147752_+|transposase	IS256 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	45.7	4.3e-85
WP_067977263.1|147776_151895_-	DEAD/DEAH box helicase family protein	NA	A0A1V0SII8	Klosneuvirus	29.1	4.2e-18
WP_067977264.1|151887_152634_-	methylase	NA	NA	NA	NA	NA
WP_067977265.1|152786_153011_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A1S5S8E8	Streptococcus_phage	43.8	1.3e-14
WP_067977266.1|153050_153275_-	hypothetical protein	NA	A0A1X9I609	Streptococcus_phage	46.1	1.5e-07
WP_067977267.1|153344_153782_-	Ohr family peroxiredoxin	NA	NA	NA	NA	NA
WP_067977268.1|153933_154839_+	acetamidase	NA	A0A1V0S8X7	Catovirus	24.6	2.0e-10
>prophage 2
NZ_CP014163	Aerococcus urinaehominis strain CCUG42038B chromosome, complete genome	1831400	261644	277145	1831400		Bacillus_virus(22.22%)	14	NA	NA
WP_067977347.1|261644_263657_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	41.2	1.4e-123
WP_067977348.1|263862_264468_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_067977349.1|264518_265325_-	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_067977350.1|265329_266259_-	tyrosine recombinase	NA	A0A1P8DJJ6	Virus_Rctr41k	26.9	4.8e-15
WP_067977351.1|266460_268524_-	type I DNA topoisomerase	NA	A0A1V0SB35	Catovirus	36.3	3.7e-100
WP_067977352.1|268641_269598_-	DNA-protecting protein DprA	NA	S6BFL3	Thermus_phage	34.4	4.8e-26
WP_074572497.1|269669_270464_-	ribonuclease HII	NA	G4YAY0	Emiliania_huxleyi_virus	40.5	6.8e-26
WP_067977354.1|270456_271344_-	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_067977355.1|271364_272828_-	PDZ domain-containing protein	NA	A0A0R6PIZ1	Moraxella_phage	28.4	1.8e-19
WP_143236665.1|272860_273082_-	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA	NA
WP_067977357.1|273085_273724_-	YpmS family protein	NA	NA	NA	NA	NA
WP_067977358.1|273733_274228_-	dihydrofolate reductase	NA	G3MBI7	Bacillus_virus	33.5	2.6e-23
WP_067977359.1|274239_275193_-	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	62.7	1.5e-120
WP_067977360.1|275228_277145_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	31.1	1.7e-54
>prophage 3
NZ_CP014163	Aerococcus urinaehominis strain CCUG42038B chromosome, complete genome	1831400	528280	538730	1831400	tRNA	Staphylococcus_phage(28.57%)	8	NA	NA
WP_067977778.1|528280_530695_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	69.0	0.0e+00
WP_067977781.1|530994_532806_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A249Y0X5	Enterococcus_phage	41.2	5.9e-17
WP_067977784.1|533002_533572_+	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	39.7	1.1e-30
WP_067977785.1|533571_534249_+	hypothetical protein	NA	NA	NA	NA	NA
WP_067977788.1|534278_534479_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	66.2	4.5e-19
WP_067977790.1|534669_535365_-	JAB domain-containing protein	NA	A0A1B2LRS6	Wolbachia_phage	22.6	6.6e-09
WP_067977792.1|535433_536078_-	HAD family phosphatase	NA	G3MA51	Bacillus_virus	30.3	3.2e-18
WP_067977795.1|536090_538730_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	41.0	8.3e-153
>prophage 4
NZ_CP014163	Aerococcus urinaehominis strain CCUG42038B chromosome, complete genome	1831400	1148618	1162083	1831400		Streptococcus_phage(33.33%)	13	NA	NA
WP_067979162.1|1148618_1149491_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	50.0	4.0e-72
WP_074572599.1|1149511_1150459_+	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	51.8	1.1e-88
WP_067979164.1|1150628_1152350_+	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	58.5	1.1e-185
WP_067979166.1|1152375_1153269_+	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	31.3	1.9e-08
WP_067979169.1|1153265_1154264_+	uridine diphosphate-N-acetylglucosamine-binding protein YvcK	NA	A1IMD5	Streptococcus_phage	49.7	1.6e-85
WP_067979171.1|1154284_1155223_+	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	37.3	2.0e-48
WP_067979174.1|1155288_1155651_-	single-stranded DNA-binding protein	NA	A0A0S2MY07	Enterococcus_phage	37.2	3.0e-13
WP_067979180.1|1155760_1156486_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.3	1.2e-34
WP_067979183.1|1156486_1157911_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	28.1	7.4e-31
WP_067979186.1|1157923_1158559_+	VanZ family protein	NA	NA	NA	NA	NA
WP_067979190.1|1158542_1159745_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	45.7	4.0e-86
WP_067979194.1|1159995_1161264_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	58.1	5.8e-27
WP_067979198.1|1161384_1162083_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.1	2.8e-31
>prophage 5
NZ_CP014163	Aerococcus urinaehominis strain CCUG42038B chromosome, complete genome	1831400	1585802	1649614	1831400	protease,transposase	Planktothrix_phage(22.22%)	52	NA	NA
WP_067980307.1|1585802_1587065_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	60.1	2.8e-135
WP_067980310.1|1587080_1587686_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_158320181.1|1587724_1589632_+	DNA primase	NA	A0A1S5RF71	Helicobacter_phage	29.9	1.4e-40
WP_067980316.1|1589647_1590778_+	RNA polymerase sigma factor RpoD	NA	F4YCU2	Synechococcus_phage	38.0	3.8e-38
WP_067980319.1|1591106_1591346_-	hypothetical protein	NA	NA	NA	NA	NA
WP_067980321.1|1591490_1592393_+	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA	NA
WP_067980325.1|1592403_1594008_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.3	1.7e-12
WP_067980328.1|1594489_1595200_+	hypothetical protein	NA	NA	NA	NA	NA
WP_067980331.1|1595192_1595513_+	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_067980334.1|1595908_1597084_-|transposase	IS256 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	45.4	1.2e-84
WP_067980336.1|1597755_1598832_-	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA	NA
WP_067980338.1|1598832_1599957_-	phosphomevalonate kinase	NA	NA	NA	NA	NA
WP_067980341.1|1599934_1600957_-	diphosphomevalonate decarboxylase	NA	NA	NA	NA	NA
WP_067980344.1|1600981_1601944_-	mevalonate kinase	NA	NA	NA	NA	NA
WP_067980347.1|1602161_1603721_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	33.0	2.8e-15
WP_067980351.1|1603998_1604253_+	hypothetical protein	NA	NA	NA	NA	NA
WP_067980354.1|1604665_1605460_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_067980357.1|1605462_1606779_+	hypothetical protein	NA	NA	NA	NA	NA
WP_067980360.1|1606783_1608145_+	adenylosuccinate lyase	NA	A0A1B1ISB0	uncultured_Mediterranean_phage	27.3	1.6e-11
WP_067980363.1|1608137_1608644_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_067980366.1|1608649_1609315_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_067980369.1|1609324_1610068_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.9	1.3e-31
WP_067980372.1|1610111_1611476_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_067980374.1|1611704_1611923_+	helix-turn-helix transcriptional regulator	NA	A0A2K5B261	Erysipelothrix_phage	42.0	3.9e-08
WP_143236707.1|1613208_1613532_+	hypothetical protein	NA	Q1MVP0	Enterobacteria_phage	41.9	1.6e-10
WP_143236708.1|1613461_1614604_+	site-specific DNA-methyltransferase	NA	Q1MVP0	Enterobacteria_phage	36.8	6.3e-57
WP_067980377.1|1614725_1615064_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082702130.1|1618086_1619094_+	DUF4297 domain-containing protein	NA	NA	NA	NA	NA
WP_067980385.1|1619090_1620782_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158320184.1|1621297_1621474_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082702095.1|1621667_1622024_-	hypothetical protein	NA	NA	NA	NA	NA
WP_074572674.1|1621996_1622182_+	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_067980388.1|1622390_1623236_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_067980394.1|1625344_1625998_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_067980396.1|1625984_1626665_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_067980399.1|1626664_1627426_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.9	1.5e-27
WP_143236715.1|1627438_1628323_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_067980407.1|1628444_1630781_-	ABC transporter ATP-binding protein/permease	NA	G9BWD6	Planktothrix_phage	39.7	3.6e-35
WP_067980409.1|1630980_1632108_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_067980412.1|1632288_1633083_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_067980415.1|1634122_1635298_+|transposase	IS256 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	45.4	2.1e-84
WP_067980418.1|1635584_1636928_-	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA	NA
WP_082702096.1|1637237_1638383_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_067980427.1|1638497_1639379_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_067980429.1|1639378_1640353_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_067980432.1|1640352_1641105_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.7	3.3e-14
WP_067980436.1|1641115_1641817_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	28.7	3.4e-13
WP_067977262.1|1643147_1644323_-|transposase	IS256 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	45.7	4.3e-85
WP_067980439.1|1644765_1645656_+	hypothetical protein	NA	NA	NA	NA	NA
WP_067980442.1|1645782_1646136_+	alkylphosphonate utilization protein	NA	NA	NA	NA	NA
WP_067980446.1|1646708_1647344_+	hypothetical protein	NA	NA	NA	NA	NA
WP_067977262.1|1648438_1649614_+|transposase	IS256 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	45.7	4.3e-85
