assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001518935.2_ASM151893v2	NZ_CP013991	Corynebacterium glutamicum strain USDA-ARS-USMARC-56828 chromosome, complete genome	1	261590-261692	1	CRISPRCasFinder	no		DEDDh,csa3,csb1gr7,csb2gr5,cas3,csb3,cas4,cas1,cas2,cas9,WYL,PrimPol,DinG	Orphan	GCCCTGTTTGAACCGCCCGATCACAACAGGGC	32	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,csb1gr7,csb2gr5,cas3,csb3,cas4,cas1,cas2,cas9,WYL,PrimPol,DinG	NA|76aa|up_8|NZ_CP013991.1_256228_256456_-,NA|160aa|up_7|NZ_CP013991.1_256503_256983_+,NA|152aa|up_6|NZ_CP013991.1_256979_257435_+,NA|135aa|up_3|NZ_CP013991.1_258817_259222_+,NA	NA|489aa|up_9|NZ_CP013991.1_254685_256152_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|76aa|up_8|NZ_CP013991.1_256228_256456_-	NA	NA|160aa|up_7|NZ_CP013991.1_256503_256983_+	NA	NA|152aa|up_6|NZ_CP013991.1_256979_257435_+	NA	NA|299aa|up_5|NZ_CP013991.1_257460_258357_+	pfam07929, PRiA4_ORF3, Plasmid pRiA4b ORF-3-like protein	NA|133aa|up_4|NZ_CP013991.1_258408_258807_+	COG2246, COG2246, Predicted membrane protein [Function unknown]	NA|135aa|up_3|NZ_CP013991.1_258817_259222_+	NA	NA|212aa|up_2|NZ_CP013991.1_259223_259859_+	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown]	NA|311aa|up_1|NZ_CP013991.1_259855_260788_-	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only]	NA|200aa|up_0|NZ_CP013991.1_260809_261409_-	pfam13468, Glyoxalase_3, Glyoxalase-like domain	NA|264aa|down_0|NZ_CP013991.1_261978_262770_-	COG1134, TagH, ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|299aa|down_1|NZ_CP013991.1_262785_263682_-	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|392aa|down_2|NZ_CP013991.1_263824_265000_+	COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]	NA|319aa|down_3|NZ_CP013991.1_264996_265953_-	cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase	NA|164aa|down_4|NZ_CP013991.1_265973_266465_-	pfam12725, DUF3810, Protein of unknown function (DUF3810)	NA|94aa|down_5|NZ_CP013991.1_266774_267056_+	COG0633, Fdx, Ferredoxin [Energy production and conversion]	NA|496aa|down_6|NZ_CP013991.1_267052_268540_-	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism]	NA|298aa|down_7|NZ_CP013991.1_269199_270093_+	pfam13338, AbiEi_4, Transcriptional regulator, AbiEi antitoxin	NA|358aa|down_8|NZ_CP013991.1_270084_271158_-	PRK05597, PRK05597, molybdopterin biosynthesis protein MoeB; Validated	NA|153aa|down_9|NZ_CP013991.1_271154_271613_-	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]
GCF_001518935.2_ASM151893v2	NZ_CP013991	Corynebacterium glutamicum strain USDA-ARS-USMARC-56828 chromosome, complete genome	2	377820-377915	2	CRISPRCasFinder	no		DEDDh,csa3,csb1gr7,csb2gr5,cas3,csb3,cas4,cas1,cas2,cas9,WYL,PrimPol,DinG	Orphan	TGCGTGGGCAGTGTGGTTTGGTTT	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,csb1gr7,csb2gr5,cas3,csb3,cas4,cas1,cas2,cas9,WYL,PrimPol,DinG	NA|62aa|up_4|NZ_CP013991.1_374163_374349_-,NA|107aa|down_8|NZ_CP013991.1_385118_385439_+	NA|315aa|up_9|NZ_CP013991.1_369572_370517_+	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|399aa|up_8|NZ_CP013991.1_370509_371706_+	cd01151, GCD, Glutaryl-CoA dehydrogenase	NA|158aa|up_7|NZ_CP013991.1_371727_372201_+	cd03450, NodN, NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit	NA|276aa|up_6|NZ_CP013991.1_372315_373143_+	cd16278, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|228aa|up_5|NZ_CP013991.1_373218_373902_-	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|62aa|up_4|NZ_CP013991.1_374163_374349_-	NA	NA|261aa|up_3|NZ_CP013991.1_374394_375177_+	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|187aa|up_2|NZ_CP013991.1_375184_375745_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|248aa|up_1|NZ_CP013991.1_375737_376481_+	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|399aa|up_0|NZ_CP013991.1_376571_377768_+	pfam02674, Colicin_V, Colicin V production protein	NA|332aa|down_0|NZ_CP013991.1_378320_379316_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|184aa|down_1|NZ_CP013991.1_379330_379882_-	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|281aa|down_2|NZ_CP013991.1_380046_380889_-	cd02612, HAD_PGPPase, phosphatidylglycerol-phosphate phosphatase, similar to Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C	NA|354aa|down_3|NZ_CP013991.1_381366_382428_+	TIGR03815, CpaE_hom_Actino, helicase/secretion neighborhood CpaE-like protein	NA|378aa|down_4|NZ_CP013991.1_382424_383558_+	TIGR03819, heli_sec_ATPase, helicase/secretion neighborhood ATPase	NA|259aa|down_5|NZ_CP013991.1_383542_384319_+	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion]	NA|192aa|down_6|NZ_CP013991.1_384315_384891_+	COG2064, TadC, Flp pilus assembly protein TadC [Cell motility and secretion / Intracellular trafficking and secretion]	NA|67aa|down_7|NZ_CP013991.1_384914_385115_+	pfam14029, DUF4244, Protein of unknown function (DUF4244)	NA|107aa|down_8|NZ_CP013991.1_385118_385439_+	NA	NA|100aa|down_9|NZ_CP013991.1_385461_385761_+	TIGR03816, tadE_like_DECH, helicase/secretion neighborhood TadE-like protein
GCF_001518935.2_ASM151893v2	NZ_CP013991	Corynebacterium glutamicum strain USDA-ARS-USMARC-56828 chromosome, complete genome	3	762635-764834	1,3,1,2	CRT,CRISPRCasFinder,PILER-CR,PILER-CR	no	csb1gr7,csb2gr5,cas3,csb3,cas4,cas1,cas2	DEDDh,csa3,csb1gr7,csb2gr5,cas3,csb3,cas4,cas1,cas2,cas9,WYL,PrimPol,DinG	Unclear	CCCTCAATGAAAGGCCGTCGAATTAACGACGGCAAG,CCCTCAATGAAAGGCCGTCGAATTAACGACGGCAAG,CCTCAATGAAAGGCCGTCGAATTAACGACGGCAAG,CCCTCAATGAAAGGCCGTCGAATTAACGACGGCAAG	36,36,35,36	0	0	NA	NA	NA:NA:NA:NA	30,29,27,27	30	Unclear	DEDDh,csa3,csb1gr7,csb2gr5,cas3,csb3,cas4,cas1,cas2,cas9,WYL,PrimPol,DinG	NA|109aa|up_9|NZ_CP013991.1_751340_751667_+,NA|148aa|up_8|NZ_CP013991.1_751730_752174_-,NA|257aa|down_0|NZ_CP013991.1_765698_766469_+,NA|221aa|down_2|NZ_CP013991.1_768062_768725_-	NA|109aa|up_9|NZ_CP013991.1_751340_751667_+	NA	NA|148aa|up_8|NZ_CP013991.1_751730_752174_-	NA	csb1gr7|401aa|up_7|NZ_CP013991.1_752610_753813_+	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053)	csb2gr5|516aa|up_6|NZ_CP013991.1_753815_755363_+	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system	cas3|902aa|up_5|NZ_CP013991.1_755375_758081_+	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc	csb3|351aa|up_4|NZ_CP013991.1_758080_759133_+	cd09764, Csb3_I-U, CRISPR/Cas system-associated RAMP superfamily protein Csb3	cas4|295aa|up_3|NZ_CP013991.1_759132_760017_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas1|154aa|up_2|NZ_CP013991.1_760013_760475_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	NA|437aa|up_1|NZ_CP013991.1_760709_762020_+	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	cas2|101aa|up_0|NZ_CP013991.1_762187_762490_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|257aa|down_0|NZ_CP013991.1_765698_766469_+	NA	NA|527aa|down_1|NZ_CP013991.1_766477_768058_+	cd03468, PolY_like, DNA Polymerase Y-family	NA|221aa|down_2|NZ_CP013991.1_768062_768725_-	NA	NA|288aa|down_3|NZ_CP013991.1_768863_769727_+	COG4759, COG4759, Uncharacterized protein conserved in bacteria containing thioredoxin-like domain [Posttranslational modification, protein turnover, chaperones]	NA|288aa|down_4|NZ_CP013991.1_769735_770599_-	PRK13105, ubiA, prenyltransferase; Reviewed	NA|131aa|down_5|NZ_CP013991.1_770601_770994_-	TIGR03462, Bifunctional_lycopene_cyclase/phytoene_synthase, lycopene cyclase domain	NA|150aa|down_6|NZ_CP013991.1_770990_771440_-	TIGR03462, Bifunctional_lycopene_cyclase/phytoene_synthase, lycopene cyclase domain	NA|549aa|down_7|NZ_CP013991.1_771443_773090_-	TIGR02734, Phytoene_desaturase_lycopene-forming, phytoene desaturase	NA|305aa|down_8|NZ_CP013991.1_773089_774004_-	COG1562, ERG9, Phytoene/squalene synthetase [Lipid metabolism]	NA|713aa|down_9|NZ_CP013991.1_774000_776139_-	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only]
GCF_001518935.2_ASM151893v2	NZ_CP013991	Corynebacterium glutamicum strain USDA-ARS-USMARC-56828 chromosome, complete genome	4	1495048-1495144	4	CRISPRCasFinder	no		DEDDh,csa3,csb1gr7,csb2gr5,cas3,csb3,cas4,cas1,cas2,cas9,WYL,PrimPol,DinG	Orphan	TTTGGCACGTGTGTCCGGTTATGAG	25	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,csb1gr7,csb2gr5,cas3,csb3,cas4,cas1,cas2,cas9,WYL,PrimPol,DinG	NA|180aa|up_5|NZ_CP013991.1_1489399_1489939_+,NA|367aa|down_6|NZ_CP013991.1_1506763_1507864_+,NA|146aa|down_7|NZ_CP013991.1_1507879_1508317_-	NA|708aa|up_9|NZ_CP013991.1_1485366_1487490_+	COG1200, RecG, RecG-like helicase [DNA replication, recombination, and repair / Transcription]	NA|72aa|up_8|NZ_CP013991.1_1487509_1487725_+	COG0511, AccB, Biotin carboxyl carrier protein [Lipid metabolism]	NA|195aa|up_7|NZ_CP013991.1_1487724_1488309_+	COG0742, COG0742, N6-adenine-specific methylase [DNA replication, recombination, and repair]	NA|161aa|up_6|NZ_CP013991.1_1488312_1488795_+	PRK00168, coaD, phosphopantetheine adenylyltransferase; Provisional	NA|180aa|up_5|NZ_CP013991.1_1489399_1489939_+	NA	NA|251aa|up_4|NZ_CP013991.1_1489999_1490752_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|317aa|up_3|NZ_CP013991.1_1490767_1491718_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|335aa|up_2|NZ_CP013991.1_1491760_1492765_-	cd01004, PBP2_MidA_like, Mimosine binding domain of ABC-type transporter MidA and similar proteins; the type 2 periplasmic binding protein fold	NA|270aa|up_1|NZ_CP013991.1_1492864_1493674_+	pfam06889, DUF1266, Protein of unknown function (DUF1266)	NA|327aa|up_0|NZ_CP013991.1_1493756_1494737_-	COG2035, COG2035, Predicted membrane protein [Function unknown]	NA|881aa|down_0|NZ_CP013991.1_1495559_1498202_+	PRK05755, PRK05755, DNA polymerase I; Provisional	NA|292aa|down_1|NZ_CP013991.1_1499330_1500206_+	cd19127, AKR_AKR5B1, AKR5B family of aldo-keto reductase (AKR)	NA|260aa|down_2|NZ_CP013991.1_1500579_1501359_-	pfam08241, Methyltransf_11, Methyltransferase domain	NA|487aa|down_3|NZ_CP013991.1_1501610_1503071_+	PRK07899, rpsA, 30S ribosomal protein S1; Reviewed	NA|682aa|down_4|NZ_CP013991.1_1503729_1505775_+	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component	NA|201aa|down_5|NZ_CP013991.1_1505785_1506388_+	PRK14734, coaE, dephospho-CoA kinase; Provisional	NA|367aa|down_6|NZ_CP013991.1_1506763_1507864_+	NA	NA|146aa|down_7|NZ_CP013991.1_1507879_1508317_-	NA	NA|313aa|down_8|NZ_CP013991.1_1508728_1509667_-	cd02651, nuc_hydro_IU_UC_XIUA, nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, xanthosine-inosine-uridine-adenosine-preferring and, uridine-cytidine preferring nucleoside hydrolases	NA|484aa|down_9|NZ_CP013991.1_1509699_1511151_-	cd17504, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) transporters of the Major Facilitator Superfamily
GCF_001518935.2_ASM151893v2	NZ_CP013991	Corynebacterium glutamicum strain USDA-ARS-USMARC-56828 chromosome, complete genome	5	3122436-3122606	2	CRT	no		DEDDh,csa3,csb1gr7,csb2gr5,cas3,csb3,cas4,cas1,cas2,cas9,WYL,PrimPol,DinG	Orphan	GCCTTGGTTTCCACCGAA	18	0	0	NA	NA	NA	3	3	Orphan	DEDDh,csa3,csb1gr7,csb2gr5,cas3,csb3,cas4,cas1,cas2,cas9,WYL,PrimPol,DinG	NA|61aa|up_4|NZ_CP013991.1_3118649_3118832_-,NA|60aa|up_2|NZ_CP013991.1_3119237_3119417_-,NA|48aa|down_1|NZ_CP013991.1_3123424_3123568_-,NA|64aa|down_2|NZ_CP013991.1_3123655_3123847_-,NA|166aa|down_8|NZ_CP013991.1_3129678_3130176_+	NA|473aa|up_9|NZ_CP013991.1_3113355_3114774_+	COG1432, COG1432, Uncharacterized conserved protein [Function unknown]	NA|292aa|up_8|NZ_CP013991.1_3114833_3115709_-	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms]	NA|125aa|up_7|NZ_CP013991.1_3116403_3116778_-	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin	NA|69aa|up_6|NZ_CP013991.1_3116963_3117170_+	COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism]	NA|440aa|up_5|NZ_CP013991.1_3117370_3118690_+	TIGR00895, transport_protein, benzoate transport	NA|61aa|up_4|NZ_CP013991.1_3118649_3118832_-	NA	NA|133aa|up_3|NZ_CP013991.1_3118842_3119241_-	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|60aa|up_2|NZ_CP013991.1_3119237_3119417_-	NA	NA|511aa|up_1|NZ_CP013991.1_3119645_3121178_-	PRK05636, PRK05636, replicative DNA helicase; Provisional	NA|151aa|up_0|NZ_CP013991.1_3121785_3122238_-	PRK00137, rplI, 50S ribosomal protein L9; Reviewed	NA|96aa|down_0|NZ_CP013991.1_3123008_3123296_-	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed	NA|48aa|down_1|NZ_CP013991.1_3123424_3123568_-	NA	NA|64aa|down_2|NZ_CP013991.1_3123655_3123847_-	NA	NA|487aa|down_3|NZ_CP013991.1_3123843_3125304_-	COG5650, COG5650, Predicted integral membrane protein [Function unknown]	NA|721aa|down_4|NZ_CP013991.1_3125349_3127512_-	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane]	NA|131aa|down_5|NZ_CP013991.1_3127603_3127996_-	pfam17249, DUF5318, Family of unknown function (DUF5318)	NA|158aa|down_6|NZ_CP013991.1_3128201_3128675_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|314aa|down_7|NZ_CP013991.1_3128705_3129647_+	pfam00582, Usp, Universal stress protein family	NA|166aa|down_8|NZ_CP013991.1_3129678_3130176_+	NA	NA|108aa|down_9|NZ_CP013991.1_3130243_3130567_-	COG2329, COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides [General function prediction only]
