The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP013988	Aerococcus urinaeequi strain USDA-ARS-USMARC-56713 chromosome, complete genome	2054328	284448	296023	2054328		Streptococcus_phage(50.0%)	11	NA	NA
WP_026465257.1|284448_285387_+	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	48.9	1.2e-85
WP_059348410.1|285613_287338_+	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	55.7	6.1e-181
WP_059348411.1|287410_288298_+	RNase adapter RapZ	NA	NA	NA	NA	NA
WP_059348412.1|288294_289326_+	uridine diphosphate-N-acetylglucosamine-binding protein YvcK	NA	A1IMD5	Streptococcus_phage	49.2	3.4e-86
WP_016897946.1|289350_290295_+	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	37.9	8.6e-52
WP_026465262.1|290684_291110_-	DUF1772 domain-containing protein	NA	NA	NA	NA	NA
WP_059348413.1|291306_291687_-	single-stranded DNA-binding protein	NA	A0A097BYB0	Leuconostoc_phage	30.4	3.4e-07
WP_026465264.1|291948_292674_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	33.6	2.7e-29
WP_026465265.1|292676_294119_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	33.5	5.2e-32
WP_059348414.1|294159_294810_+	VanZ family protein	NA	NA	NA	NA	NA
WP_016897940.1|294802_296023_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	46.9	6.6e-89
>prophage 2
NZ_CP013988	Aerococcus urinaeequi strain USDA-ARS-USMARC-56713 chromosome, complete genome	2054328	765445	774174	2054328		Tetraselmis_virus(16.67%)	8	NA	NA
WP_016896849.1|765445_765925_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	49.3	1.2e-28
WP_016896850.1|765936_767187_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	28.4	1.9e-30
WP_059348718.1|767217_768243_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SR00	Cyanophage	45.1	1.0e-66
WP_026466293.1|768239_768803_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	38.9	1.5e-24
WP_059348719.1|768855_770376_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	42.7	1.2e-60
WP_059348720.1|770406_771660_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_016896855.1|771920_772370_+	winged helix DNA-binding protein	NA	NA	NA	NA	NA
WP_059348721.1|772398_774174_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.3	8.9e-34
>prophage 3
NZ_CP013988	Aerococcus urinaeequi strain USDA-ARS-USMARC-56713 chromosome, complete genome	2054328	1039579	1049059	2054328		Tupanvirus(16.67%)	10	NA	NA
WP_059348863.1|1039579_1041493_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.9	1.5e-58
WP_026466084.1|1041555_1042509_+	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	61.4	1.4e-115
WP_059348864.1|1042564_1043068_+	dihydrofolate reductase	NA	A0A1Q2U372	Vibrio_phage	37.5	5.4e-21
WP_059348865.1|1043085_1043739_+	YpmS family protein	NA	NA	NA	NA	NA
WP_016897095.1|1043763_1043997_+	D-Ala-D-Ala carboxypeptidase	NA	NA	NA	NA	NA
WP_059348866.1|1044055_1045636_+	S41 family peptidase	NA	A0A0R6PIZ1	Moraxella_phage	30.3	1.8e-25
WP_059134308.1|1045730_1046291_+	signal peptidase I	NA	NA	NA	NA	NA
WP_026466079.1|1046385_1047261_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_082685353.1|1047261_1048071_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	34.9	1.2e-22
WP_059349378.1|1048171_1049059_+	DNA-protecting protein DprA	NA	S6BFL3	Thermus_phage	45.8	7.4e-21
>prophage 4
NZ_CP013988	Aerococcus urinaeequi strain USDA-ARS-USMARC-56713 chromosome, complete genome	2054328	1743482	1749613	2054328		Staphylococcus_phage(66.67%)	8	NA	NA
WP_059349211.1|1743482_1743956_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	53.6	5.6e-36
WP_059349212.1|1743974_1745171_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	51.3	1.9e-109
WP_059349213.1|1745171_1745774_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	41.2	6.5e-37
WP_059349214.1|1745774_1746869_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	36.0	4.5e-44
WP_059349215.1|1747205_1747844_-	deoxyribonuclease I	NA	NA	NA	NA	NA
WP_026465769.1|1747926_1748454_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	39.3	3.1e-27
WP_026465770.1|1748553_1748937_-	tautomerase family protein	NA	NA	NA	NA	NA
WP_059349216.1|1749178_1749613_-	cupin domain-containing protein	NA	Q2I8C5	Bacillus_phage	51.2	4.8e-34
