assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001516245.2_ASM151624v2	NZ_CP008856	Pseudomonas aeruginosa strain F23197 chromosome, complete genome	1	1512098-1513267	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no		csa3,DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,PD-DExK	Orphan	GTTCACTGCCGTACAGGCAGCTAAGAAA,GTTCACTGCCGTACAGGCAGCTAAGAAA,GTTCACTGCCGTACAGGCAGCTAAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	19,19,19	19	Orphan	csa3,DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,PD-DExK	NA|105aa|up_0|NZ_CP008856.2_1511511_1511826_+,NA|141aa|down_0|NZ_CP008856.2_1514087_1514510_-,NA|59aa|down_5|NZ_CP008856.2_1517687_1517864_-	NA|329aa|up_9|NZ_CP008856.2_1501231_1502218_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|110aa|up_8|NZ_CP008856.2_1502234_1502564_-	pfam06942, GlpM, GlpM protein	NA|513aa|up_7|NZ_CP008856.2_1502696_1504235_-	PRK12266, glpD, glycerol-3-phosphate dehydrogenase; Reviewed	NA|268aa|up_6|NZ_CP008856.2_1504513_1505317_-	PRK10906, PRK10906, DeoR/GlpR family transcriptional regulator	NA|506aa|up_5|NZ_CP008856.2_1505473_1506991_-	PRK00047, glpK, glycerol kinase GlpK	NA|280aa|up_4|NZ_CP008856.2_1507030_1507870_-	cd00333, MIP, Major intrinsic protein (MIP) superfamily	NA|157aa|up_3|NZ_CP008856.2_1508134_1508605_+	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins	NA|495aa|up_2|NZ_CP008856.2_1508668_1510153_+	cd07786, FGGY_EcGK_like, Escherichia coli glycerol kinase-like proteins; belongs to the FGGY family of carbohydrate kinases	NA|262aa|up_1|NZ_CP008856.2_1510348_1511134_+	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|105aa|up_0|NZ_CP008856.2_1511511_1511826_+	NA	NA|141aa|down_0|NZ_CP008856.2_1514087_1514510_-	NA	NA|177aa|down_1|NZ_CP008856.2_1514608_1515139_-	COG3038, CybB, Cytochrome B561 [Energy production and conversion]	NA|66aa|down_2|NZ_CP008856.2_1515321_1515519_+	cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones	NA|213aa|down_3|NZ_CP008856.2_1515497_1516136_-	PRK09975, PRK09975, DNA-binding transcriptional regulator EnvR; Provisional	NA|393aa|down_4|NZ_CP008856.2_1516501_1517680_+	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|59aa|down_5|NZ_CP008856.2_1517687_1517864_-	NA	NA|308aa|down_6|NZ_CP008856.2_1517990_1518914_-	cd06986, cupin_MmsR-like_N, AraC/XylS family transcriptional regulators similar to MmsR, N-terminal cupin domain	NA|498aa|down_7|NZ_CP008856.2_1519045_1520539_+	TIGR01722, Methylmalonate-semialdehyde_dehydrogenase, methylmalonic acid semialdehyde dehydrogenase	NA|299aa|down_8|NZ_CP008856.2_1520554_1521451_+	TIGR01692, 3-hydroxyisobutyrate_dehydrogenase_mitochondrial, 3-hydroxyisobutyrate dehydrogenase	NA|629aa|down_9|NZ_CP008856.2_1521552_1523439_+	cd05967, PrpE, Propionyl-CoA synthetase (PrpE)
GCF_001516245.2_ASM151624v2	NZ_CP008856	Pseudomonas aeruginosa strain F23197 chromosome, complete genome	2	1878259-1878360	2	CRISPRCasFinder	no	DEDDh	csa3,DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,PD-DExK	Unclear	GCGGCGGGTATCGGCGGATAACGCC	25	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,PD-DExK	NA|454aa|up_7|NZ_CP008856.2_1870384_1871746_-,NA|106aa|down_6|NZ_CP008856.2_1884603_1884921_+	NA|286aa|up_9|NZ_CP008856.2_1868579_1869437_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|268aa|up_8|NZ_CP008856.2_1869577_1870381_-	COG2853, VacJ, Surface lipoprotein [Cell envelope biogenesis, outer membrane]	NA|454aa|up_7|NZ_CP008856.2_1870384_1871746_-	NA	NA|74aa|up_6|NZ_CP008856.2_1871888_1872110_-	COG3205, COG3205, Predicted membrane protein [Function unknown]	NA|286aa|up_5|NZ_CP008856.2_1872403_1873261_+	cd13639, PBP2_OpuAC_like, Substrate binding domain of Lactococcus lactis ABC-type transporter OpuA and related proteins; the type 2 periplasmic binding protein fold	NA|104aa|up_4|NZ_CP008856.2_1873478_1873790_+	COG3162, COG3162, Predicted membrane protein [Function unknown]	NA|552aa|up_3|NZ_CP008856.2_1873786_1875442_+	PRK09395, actP, cation/acetate symporter ActP	NA|600aa|up_2|NZ_CP008856.2_1875531_1877331_+	COG2905, COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]	DEDDh|209aa|up_1|NZ_CP008856.2_1877327_1877954_+	PRK09145, PRK09145, 3'-5' exonuclease	NA|53aa|up_0|NZ_CP008856.2_1878062_1878221_+	pfam11752, DUF3309, Protein of unknown function (DUF3309)	NA|375aa|down_0|NZ_CP008856.2_1878495_1879620_+	pfam04339, FemAB_like, Peptidogalycan biosysnthesis/recognition	NA|89aa|down_1|NZ_CP008856.2_1879652_1879919_-	pfam10976, DUF2790, Protein of unknown function (DUF2790)	NA|611aa|down_2|NZ_CP008856.2_1880200_1882033_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|188aa|down_3|NZ_CP008856.2_1882095_1882659_-	PRK10903, PRK10903, peptidylprolyl isomerase A	NA|276aa|down_4|NZ_CP008856.2_1882640_1883468_-	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|310aa|down_5|NZ_CP008856.2_1883474_1884404_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|106aa|down_6|NZ_CP008856.2_1884603_1884921_+	NA	NA|214aa|down_7|NZ_CP008856.2_1885067_1885709_+	COG1182, AcpD, Acyl carrier protein phosphodiesterase [Lipid metabolism]	NA|300aa|down_8|NZ_CP008856.2_1885813_1886713_-	pfam00892, EamA, EamA-like transporter family	NA|112aa|down_9|NZ_CP008856.2_1886722_1887058_-	PRK10089, PRK10089, chaperone CsaA
GCF_001516245.2_ASM151624v2	NZ_CP008856	Pseudomonas aeruginosa strain F23197 chromosome, complete genome	3	2845847-2846835	3,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1	csa3,DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,PD-DExK	Type I-F	GTTCACTGCCGTACAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	15,16,13	16	TypeI-F	csa3,DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,PD-DExK	NA|82aa|up_6|NZ_CP008856.2_2827390_2827636_-,NA|156aa|up_4|NZ_CP008856.2_2828898_2829366_+,NA|105aa|down_6|NZ_CP008856.2_2857463_2857778_-	NA|725aa|up_9|NZ_CP008856.2_2823979_2826154_+	pfam04632, FUSC, Fusaric acid resistance protein family	NA|70aa|up_8|NZ_CP008856.2_2826143_2826353_+	pfam07869, DUF1656, Protein of unknown function (DUF1656)	NA|335aa|up_7|NZ_CP008856.2_2826349_2827354_+	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|82aa|up_6|NZ_CP008856.2_2827390_2827636_-	NA	NA|305aa|up_5|NZ_CP008856.2_2827897_2828812_+	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family	NA|156aa|up_4|NZ_CP008856.2_2828898_2829366_+	NA	NA|188aa|up_3|NZ_CP008856.2_2829382_2829946_-	PRK07037, PRK07037, extracytoplasmic-function sigma-70 factor; Validated	NA|255aa|up_2|NZ_CP008856.2_2830588_2831353_+	COG3208, GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|4343aa|up_1|NZ_CP008856.2_2831426_2844455_+	PRK05691, PRK05691, peptide synthase; Validated	NA|171aa|up_0|NZ_CP008856.2_2844940_2845453_-	COG3617, COG3617, Prophage antirepressor [Transcription]	cas6f|188aa|down_0|NZ_CP008856.2_2847024_2847588_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|343aa|down_1|NZ_CP008856.2_2847591_2848620_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|328aa|down_2|NZ_CP008856.2_2848630_2849614_-	cd09736, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2	cas8f|435aa|down_3|NZ_CP008856.2_2849600_2850905_-	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas3f|1077aa|down_4|NZ_CP008856.2_2850962_2854193_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|325aa|down_5|NZ_CP008856.2_2854189_2855164_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|105aa|down_6|NZ_CP008856.2_2857463_2857778_-	NA	NA|388aa|down_7|NZ_CP008856.2_2858024_2859187_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|304aa|down_8|NZ_CP008856.2_2859492_2860404_-	COG4313, COG4313, Protein involved in meta-pathway of phenol degradation [Energy production and conversion]	NA|473aa|down_9|NZ_CP008856.2_2860437_2861856_-	pfam03573, OprD, outer membrane porin, OprD family
GCF_001516245.2_ASM151624v2	NZ_CP008856	Pseudomonas aeruginosa strain F23197 chromosome, complete genome	4	2855424-2857194	4,3,3	CRISPRCasFinder,CRT,PILER-CR	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1	csa3,DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,PD-DExK	Type I-F	ATTTCTTAGCTGCCTACACGGCAGTGAAC,TTTCTTAGCTGCCTACACGGCAGTGAAC,GTTCACTGCCGTGTAGGCAGCTAAGAAA	29,28,28	0	0	NA	NA	I-F:I-F:I-F	29,29,11	29	TypeI-F	csa3,DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,PD-DExK	NA,NA|105aa|down_0|NZ_CP008856.2_2857463_2857778_-	NA|188aa|up_9|NZ_CP008856.2_2829382_2829946_-	PRK07037, PRK07037, extracytoplasmic-function sigma-70 factor; Validated	NA|255aa|up_8|NZ_CP008856.2_2830588_2831353_+	COG3208, GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|4343aa|up_7|NZ_CP008856.2_2831426_2844455_+	PRK05691, PRK05691, peptide synthase; Validated	NA|171aa|up_6|NZ_CP008856.2_2844940_2845453_-	COG3617, COG3617, Prophage antirepressor [Transcription]	cas6f|188aa|up_5|NZ_CP008856.2_2847024_2847588_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|343aa|up_4|NZ_CP008856.2_2847591_2848620_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|328aa|up_3|NZ_CP008856.2_2848630_2849614_-	cd09736, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2	cas8f|435aa|up_2|NZ_CP008856.2_2849600_2850905_-	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas3f|1077aa|up_1|NZ_CP008856.2_2850962_2854193_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|325aa|up_0|NZ_CP008856.2_2854189_2855164_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|105aa|down_0|NZ_CP008856.2_2857463_2857778_-	NA	NA|388aa|down_1|NZ_CP008856.2_2858024_2859187_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|304aa|down_2|NZ_CP008856.2_2859492_2860404_-	COG4313, COG4313, Protein involved in meta-pathway of phenol degradation [Energy production and conversion]	NA|473aa|down_3|NZ_CP008856.2_2860437_2861856_-	pfam03573, OprD, outer membrane porin, OprD family	NA|227aa|down_4|NZ_CP008856.2_2861937_2862618_-	cd01012, YcaC_related, YcaC related amidohydrolases; E	NA|287aa|down_5|NZ_CP008856.2_2862715_2863576_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|313aa|down_6|NZ_CP008856.2_2863676_2864615_+	PRK14997, PRK14997, LysR family transcriptional regulator; Provisional	NA|548aa|down_7|NZ_CP008856.2_2864618_2866262_-	PRK13272, treA, alpha,alpha-trehalase TreA	NA|142aa|down_8|NZ_CP008856.2_2866620_2867046_+	COG4244, COG4244, Predicted membrane protein [Function unknown]	NA|440aa|down_9|NZ_CP008856.2_2867038_2868358_+	COG2133, COG2133, Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism]
GCF_001516245.2_ASM151624v2	NZ_CP008856	Pseudomonas aeruginosa strain F23197 chromosome, complete genome	5	5727527-5727621	5	CRISPRCasFinder	no		csa3,DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,PD-DExK	Orphan	GCCGACAACGGCAGCGAGCAGACCGT	26	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,PD-DExK	NA|205aa|up_9|NZ_CP008856.2_5718051_5718666_+,NA|208aa|down_2|NZ_CP008856.2_5729215_5729839_-	NA|205aa|up_9|NZ_CP008856.2_5718051_5718666_+	NA	NA|288aa|up_8|NZ_CP008856.2_5718757_5719621_-	COG2513, PrpB, PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism]	NA|422aa|up_7|NZ_CP008856.2_5719828_5721094_+	cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins	NA|139aa|up_6|NZ_CP008856.2_5721268_5721685_-	PRK11505, PRK11505, phosphate starvation-inducible protein PsiF	NA|180aa|up_5|NZ_CP008856.2_5721839_5722379_+	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown]	NA|115aa|up_4|NZ_CP008856.2_5722467_5722812_+	PRK11251, PRK11251, osmotically-inducible lipoprotein OsmE	NA|136aa|up_3|NZ_CP008856.2_5722855_5723263_-	PRK09376, rho, transcription termination factor Rho; Provisional	NA|271aa|up_2|NZ_CP008856.2_5723409_5724222_+	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown]	NA|690aa|up_1|NZ_CP008856.2_5724223_5726293_-	COG2982, AsmA, Uncharacterized protein involved in outer membrane biogenesis [Cell envelope biogenesis, outer membrane]	NA|178aa|up_0|NZ_CP008856.2_5726588_5727122_+	COG2193, Bfr, Bacterioferritin (cytochrome b1) [Inorganic ion transport and metabolism]	NA|256aa|down_0|NZ_CP008856.2_5727783_5728551_-	cd02108, bact_SO_family_Moco, bacterial subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains	NA|205aa|down_1|NZ_CP008856.2_5728547_5729162_-	COG4117, COG4117, Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) [Energy production and conversion]	NA|208aa|down_2|NZ_CP008856.2_5729215_5729839_-	NA	NA|230aa|down_3|NZ_CP008856.2_5729976_5730666_+	TIGR01387, Transcriptional_regulatory_protein_PcoR, heavy metal response regulator	NA|464aa|down_4|NZ_CP008856.2_5730644_5732036_+	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase	NA|439aa|down_5|NZ_CP008856.2_5732026_5733343_-	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily	NA|371aa|down_6|NZ_CP008856.2_5733562_5734675_-	COG3239, DesA, Fatty acid desaturase [Lipid metabolism]	NA|367aa|down_7|NZ_CP008856.2_5734671_5735772_-	cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain	NA|210aa|down_8|NZ_CP008856.2_5735930_5736560_+	PRK11202, PRK11202, HTH-type transcriptional repressor FabR	NA|168aa|down_9|NZ_CP008856.2_5736789_5737293_+	PRK13261, ureE, urease accessory protein UreE; Provisional
