assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001515665.1_ASM151566v1	NZ_CP012015	Staphylococcus aureus subsp. aureus strain Gv51 chromosome, complete genome	1	443862-443962	1	CRISPRCasFinder	no		csa3,WYL,cas3,DEDDh,DinG	Orphan	TTATGAATTGAGTATTAAATTTG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas3,DEDDh,DinG	NA|70aa|up_8|NZ_CP012015.1_435434_435644_-,NA|128aa|up_6|NZ_CP012015.1_436468_436852_-,NA|34aa|up_0|NZ_CP012015.1_443086_443188_+,NA|221aa|down_1|NZ_CP012015.1_445052_445715_-	NA|84aa|up_9|NZ_CP012015.1_435144_435396_+	COG2261, COG2261, Predicted membrane protein [Function unknown]	NA|70aa|up_8|NZ_CP012015.1_435434_435644_-	NA	NA|194aa|up_7|NZ_CP012015.1_435821_436403_+	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|128aa|up_6|NZ_CP012015.1_436468_436852_-	NA	NA|209aa|up_5|NZ_CP012015.1_437106_437733_-	NF033193, lipo_NDxxF, NDxxF motif lipoprotein	NA|508aa|up_4|NZ_CP012015.1_438177_439701_-	PRK15317, PRK15317, alkyl hydroperoxide reductase subunit F; Provisional	NA|190aa|up_3|NZ_CP012015.1_439716_440286_-	TIGR03137, AhpC, peroxiredoxin	NA|252aa|up_2|NZ_CP012015.1_440777_441533_+	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA	NA|463aa|up_1|NZ_CP012015.1_441613_443002_-	COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only]	NA|34aa|up_0|NZ_CP012015.1_443086_443188_+	NA	NA|319aa|down_0|NZ_CP012015.1_443978_444935_-	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional	NA|221aa|down_1|NZ_CP012015.1_445052_445715_-	NA	NA|136aa|down_2|NZ_CP012015.1_445857_446265_-	pfam11181, YflT, Heat induced stress protein YflT	NA|193aa|down_3|NZ_CP012015.1_446777_447356_+	PRK09219, PRK09219, xanthine phosphoribosyltransferase; Validated	NA|423aa|down_4|NZ_CP012015.1_447355_448624_+	TIGR03173, pbuX, xanthine permease	NA|489aa|down_5|NZ_CP012015.1_448661_450128_+	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed	NA|514aa|down_6|NZ_CP012015.1_450152_451694_+	PRK00074, guaA, GMP synthase; Reviewed	NA|398aa|down_7|NZ_CP012015.1_451761_452955_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|67aa|down_8|NZ_CP012015.1_452981_453182_-	pfam11372, DUF3173, Domain of unknown function (DUF3173)	NA|77aa|down_9|NZ_CP012015.1_453679_453910_-	pfam12645, HTH_16, Helix-turn-helix domain
GCF_001515665.1_ASM151566v1	NZ_CP012015	Staphylococcus aureus subsp. aureus strain Gv51 chromosome, complete genome	2	709873-709965	2	CRISPRCasFinder	no		csa3,WYL,cas3,DEDDh,DinG	Orphan	CTAAAGGTGAAGAGGAACGCAGTTGGATGCTA	32	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas3,DEDDh,DinG	NA|36aa|up_3|NZ_CP012015.1_706356_706464_+,NA|169aa|down_4|NZ_CP012015.1_713712_714219_+,NA|239aa|down_5|NZ_CP012015.1_714380_715097_+	NA|313aa|up_9|NZ_CP012015.1_700558_701497_+	cd19083, AKR_AKR11A1_11D1, AKR11A and  AKR11D families of aldo-keto reductase (AKR)	NA|179aa|up_8|NZ_CP012015.1_701707_702244_+	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|159aa|up_7|NZ_CP012015.1_702412_702889_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|432aa|up_6|NZ_CP012015.1_702928_704224_+	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only]	NA|174aa|up_5|NZ_CP012015.1_704251_704773_+	pfam08741, YwhD, YwhD family	NA|337aa|up_4|NZ_CP012015.1_705271_706282_+	PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional	NA|36aa|up_3|NZ_CP012015.1_706356_706464_+	NA	NA|139aa|up_2|NZ_CP012015.1_706556_706973_+	COG4506, COG4506, Uncharacterized protein conserved in bacteria [Function unknown]	NA|554aa|up_1|NZ_CP012015.1_706969_708631_+	PRK01611, argS, arginyl-tRNA synthetase; Reviewed	NA|212aa|up_0|NZ_CP012015.1_709019_709655_+	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair]	NA|296aa|down_0|NZ_CP012015.1_710033_710921_+	cd01143, YvrC, Periplasmic binding protein YvrC	NA|317aa|down_1|NZ_CP012015.1_711068_712019_+	pfam01032, FecCD, FecCD transport family	NA|240aa|down_2|NZ_CP012015.1_712073_712793_+	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]	NA|267aa|down_3|NZ_CP012015.1_712776_713577_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|169aa|down_4|NZ_CP012015.1_713712_714219_+	NA	NA|239aa|down_5|NZ_CP012015.1_714380_715097_+	NA	NA|263aa|down_6|NZ_CP012015.1_715265_716054_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|125aa|down_7|NZ_CP012015.1_716304_716679_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|310aa|down_8|NZ_CP012015.1_717626_718556_-	COG3238, COG3238, Uncharacterized protein conserved in bacteria [Function unknown]	NA|75aa|down_9|NZ_CP012015.1_718750_718975_-	pfam11148, DUF2922, Protein of unknown function (DUF2922)
GCF_001515665.1_ASM151566v1	NZ_CP012015	Staphylococcus aureus subsp. aureus strain Gv51 chromosome, complete genome	3	830057-830139	3	CRISPRCasFinder	no		csa3,WYL,cas3,DEDDh,DinG	Orphan	CCAATTTCTACAGACAATGCAAGTTGG	27	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas3,DEDDh,DinG	NA|69aa|up_9|NZ_CP012015.1_816657_816864_+,NA|34aa|down_1|NZ_CP012015.1_831595_831697_+,NA|52aa|down_8|NZ_CP012015.1_839876_840032_+	NA|69aa|up_9|NZ_CP012015.1_816657_816864_+	NA	NA|237aa|up_8|NZ_CP012015.1_816951_817662_+	COG2049, DUR1, Allophanate hydrolase subunit 1 [Amino acid transport and metabolism]	NA|335aa|up_7|NZ_CP012015.1_817645_818650_+	COG1984, DUR1, Allophanate hydrolase subunit 2 [Amino acid transport and metabolism]	NA|647aa|up_6|NZ_CP012015.1_819123_821064_+	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]	NA|628aa|up_5|NZ_CP012015.1_821334_823218_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|594aa|up_4|NZ_CP012015.1_823229_825011_+	TIGR01389, recQ, ATP-dependent DNA helicase RecQ	NA|326aa|up_3|NZ_CP012015.1_825232_826210_+	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]	NA|505aa|up_2|NZ_CP012015.1_826202_827717_+	cd13610, PBP2_ChoS, Substrate-binding domain ChoS of an osmoregulated ABC-type transporter and related proteins; type 2 periplasmic-binding protein fold	NA|353aa|up_1|NZ_CP012015.1_827956_829015_+	PRK03158, PRK03158, histidinol-phosphate aminotransferase; Provisional	NA|181aa|up_0|NZ_CP012015.1_829365_829908_+	COG4502, COG4502, 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]	NA|306aa|down_0|NZ_CP012015.1_830587_831505_-	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	NA|34aa|down_1|NZ_CP012015.1_831595_831697_+	NA	NA|502aa|down_2|NZ_CP012015.1_831774_833280_-	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism]	NA|167aa|down_3|NZ_CP012015.1_833620_834121_-	COG0780, COG0780, Enzyme related to GTP cyclohydrolase I [General function prediction only]	NA|289aa|down_4|NZ_CP012015.1_834140_835007_-	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|133aa|down_5|NZ_CP012015.1_835807_836206_+	COG1780, NrdI, Protein involved in ribonucleotide reduction [Nucleotide transport and metabolism]	NA|702aa|down_6|NZ_CP012015.1_836168_838274_+	PRK07632, PRK07632, ribonucleotide-diphosphate reductase subunit alpha; Validated	NA|324aa|down_7|NZ_CP012015.1_838391_839363_+	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit	NA|52aa|down_8|NZ_CP012015.1_839876_840032_+	NA	NA|324aa|down_9|NZ_CP012015.1_840070_841042_+	COG4606, CeuB, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism]
GCF_001515665.1_ASM151566v1	NZ_CP012015	Staphylococcus aureus subsp. aureus strain Gv51 chromosome, complete genome	4	871109-871189	4	CRISPRCasFinder	no	cas3	csa3,WYL,cas3,DEDDh,DinG	Unclear	TTCTTTATGTTGGGGCCCCGCCAACT	26	1	10	871135-871163|871135-871163|871135-871163|871135-871163|871135-871163|871135-871163|871135-871163|871135-871163|871135-871163|871135-871163	NZ_CP012015.1_390282-390254|NZ_CP012015.1_390337-390309|NZ_CP012015.1_1960161-1960133|NZ_CP012015.1_312013-311985|NZ_CP012015.1_920999-921027|NZ_CP012015.1_1003690-1003718|NZ_CP012015.1_1245701-1245673|NZ_CP012015.1_1774143-1774171|NZ_CP012015.1_2128341-2128369|NZ_CP012015.1_2677778-2677750	NA	1	1	Unclear	csa3,WYL,cas3,DEDDh,DinG	NA|35aa|up_7|NZ_CP012015.1_862022_862127_+,NA|36aa|up_5|NZ_CP012015.1_863559_863667_+,NA	NA|191aa|up_9|NZ_CP012015.1_858463_859036_+	COG1544, COG1544, Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis]	NA|844aa|up_8|NZ_CP012015.1_859449_861981_+	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|35aa|up_7|NZ_CP012015.1_862022_862127_+	NA	NA|370aa|up_6|NZ_CP012015.1_862295_863406_+	PRK00578, prfB, peptide chain release factor 2; Validated	NA|36aa|up_5|NZ_CP012015.1_863559_863667_+	NA	NA|280aa|up_4|NZ_CP012015.1_863814_864654_+	COG3942, COG3942, Surface antigen [General function prediction only]	NA|217aa|up_3|NZ_CP012015.1_864827_865478_+	pfam12917, HD_2, HD containing hydrolase-like enzyme	NA|79aa|up_2|NZ_CP012015.1_865474_865711_+	COG4897, CsbA, Uncharacterized protein conserved in bacteria [Function unknown]	NA|662aa|up_1|NZ_CP012015.1_865979_867965_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|949aa|up_0|NZ_CP012015.1_867972_870819_+	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|311aa|down_0|NZ_CP012015.1_871425_872358_+	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional	NA|280aa|down_1|NZ_CP012015.1_872363_873203_+	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed	NA|162aa|down_2|NZ_CP012015.1_873210_873696_+	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|480aa|down_3|NZ_CP012015.1_873703_875143_+	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs	NA|312aa|down_4|NZ_CP012015.1_875209_876145_+	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|279aa|down_5|NZ_CP012015.1_876984_877821_+	COG1660, COG1660, Predicted P-loop-containing kinase [General function prediction only]	NA|332aa|down_6|NZ_CP012015.1_877817_878813_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|196aa|down_7|NZ_CP012015.1_880438_881026_+	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|301aa|down_8|NZ_CP012015.1_881268_882171_-	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]	NA|210aa|down_9|NZ_CP012015.1_882873_883503_+	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed
GCF_001515665.1_ASM151566v1	NZ_CP012015	Staphylococcus aureus subsp. aureus strain Gv51 chromosome, complete genome	5	920933-921014	5	CRISPRCasFinder	no		csa3,WYL,cas3,DEDDh,DinG	Orphan	CCCCAACTTGCATTGTCTGTAGAA	24	1	2	920957-920990|920957-920990	NZ_CP012015.1_1456590-1456557|NZ_CP012015.1_1549150-1549183	NA	1	1	Orphan	csa3,WYL,cas3,DEDDh,DinG	NA,NA	NA|194aa|up_9|NZ_CP012015.1_914036_914618_+	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|206aa|up_8|NZ_CP012015.1_914690_915308_-	COG1279, COG1279, Lysine efflux permease [General function prediction only]	NA|165aa|up_7|NZ_CP012015.1_915462_915957_-	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain	NA|141aa|up_6|NZ_CP012015.1_916355_916778_-	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily	NA|239aa|up_5|NZ_CP012015.1_916925_917642_+	PRK13575, PRK13575, type I 3-dehydroquinate dehydratase	NA|180aa|up_4|NZ_CP012015.1_917724_918264_+	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA	NA|107aa|up_3|NZ_CP012015.1_918413_918734_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|119aa|up_2|NZ_CP012015.1_918877_919234_+	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC	NA|127aa|up_1|NZ_CP012015.1_919391_919772_+	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|293aa|up_0|NZ_CP012015.1_919950_920829_+	COG3878, COG3878, Uncharacterized protein conserved in bacteria [Function unknown]	NA|129aa|down_0|NZ_CP012015.1_921570_921957_+	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]	NA|99aa|down_1|NZ_CP012015.1_921949_922246_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|342aa|down_2|NZ_CP012015.1_922495_923521_+	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|232aa|down_3|NZ_CP012015.1_923513_924209_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|274aa|down_4|NZ_CP012015.1_924226_925048_+	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|407aa|down_5|NZ_CP012015.1_925191_926412_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|453aa|down_6|NZ_CP012015.1_926453_927812_-	pfam02037, SAP, SAP domain	NA|191aa|down_7|NZ_CP012015.1_927838_928411_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|74aa|down_8|NZ_CP012015.1_928582_928804_+	COG1476, COG1476, Predicted transcriptional regulators [Transcription]	NA|91aa|down_9|NZ_CP012015.1_928804_929077_+	pfam13545, HTH_Crp_2, Crp-like helix-turn-helix domain
GCF_001515665.1_ASM151566v1	NZ_CP012015	Staphylococcus aureus subsp. aureus strain Gv51 chromosome, complete genome	6	1117447-1117534	6	CRISPRCasFinder	no		csa3,WYL,cas3,DEDDh,DinG	Orphan	CCCCTAACAACTAAAAGTTGTAAGG	25	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas3,DEDDh,DinG	NA,NA|45aa|down_0|NZ_CP012015.1_1117543_1117678_-,NA|432aa|down_1|NZ_CP012015.1_1117829_1119125_+	NA|224aa|up_9|NZ_CP012015.1_1105237_1105909_+	PRK03619, PRK03619, phosphoribosylformylglycinamidine synthase subunit PurQ	NA|730aa|up_8|NZ_CP012015.1_1105901_1108091_+	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL	NA|495aa|up_7|NZ_CP012015.1_1108069_1109554_+	PRK07272, PRK07272, amidophosphoribosyltransferase; Provisional	NA|343aa|up_6|NZ_CP012015.1_1109546_1110575_+	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|189aa|up_5|NZ_CP012015.1_1110577_1111144_+	COG0299, PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]	NA|493aa|up_4|NZ_CP012015.1_1111158_1112637_+	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|416aa|up_3|NZ_CP012015.1_1112658_1113906_+	PRK13790, PRK13790, phosphoribosylamine--glycine ligase; Provisional	NA|269aa|up_2|NZ_CP012015.1_1114170_1114977_-	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]	NA|467aa|up_1|NZ_CP012015.1_1114969_1116370_-	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system	NA|192aa|up_0|NZ_CP012015.1_1116384_1116960_-	COG4721, COG4721, ABC-type cobalt transport system, predicted permease component [Inorganic ion transport and metabolism]	NA|45aa|down_0|NZ_CP012015.1_1117543_1117678_-	NA	NA|432aa|down_1|NZ_CP012015.1_1117829_1119125_+	NA	NA|391aa|down_2|NZ_CP012015.1_1119549_1120722_+	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only]	NA|181aa|down_3|NZ_CP012015.1_1120775_1121318_+	pfam05128, DUF697, Domain of unknown function (DUF697)	NA|89aa|down_4|NZ_CP012015.1_1121471_1121738_+	PRK13780, PRK13780, phosphocarrier protein HPr; Provisional	NA|573aa|down_5|NZ_CP012015.1_1121740_1123459_+	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	NA|78aa|down_6|NZ_CP012015.1_1123695_1123929_-	cd02976, NrdH, NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile	NA|454aa|down_7|NZ_CP012015.1_1124126_1125488_+	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I	NA|340aa|down_8|NZ_CP012015.1_1125484_1126504_+	COG1294, AppB, Cytochrome bd-type quinol oxidase, subunit 2 [Energy production and conversion]	NA|221aa|down_9|NZ_CP012015.1_1126636_1127299_+	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
GCF_001515665.1_ASM151566v1	NZ_CP012015	Staphylococcus aureus subsp. aureus strain Gv51 chromosome, complete genome	7	1245735-1245820	7	CRISPRCasFinder	no		csa3,WYL,cas3,DEDDh,DinG	Orphan	AAAGTCAGCTTACAATAATGTGCAAGTTGG	30	1	5	1245765-1245790|1245765-1245790|1245765-1245790|1245765-1245790|1245765-1245790	NZ_CP012015.1_311853-311878|NZ_CP012015.1_839585-839610|NZ_CP012015.1_876562-876537|NZ_CP012015.1_839529-839554|NZ_CP012015.1_839641-839666	NA	1	1	Orphan	csa3,WYL,cas3,DEDDh,DinG	NA|31aa|up_9|NZ_CP012015.1_1238305_1238398_-,NA|169aa|up_7|NZ_CP012015.1_1239430_1239937_+,NA|62aa|up_4|NZ_CP012015.1_1242018_1242204_-,NA|78aa|up_3|NZ_CP012015.1_1242825_1243059_-,NA|49aa|up_1|NZ_CP012015.1_1245167_1245314_+,NA|75aa|up_0|NZ_CP012015.1_1245270_1245495_+,NA|76aa|down_5|NZ_CP012015.1_1252793_1253021_+	NA|31aa|up_9|NZ_CP012015.1_1238305_1238398_-	NA	NA|134aa|up_8|NZ_CP012015.1_1238357_1238759_-	PRK13033, PRK13033, formyl peptide receptor-like 1 inhibitory protein; Reviewed	NA|169aa|up_7|NZ_CP012015.1_1239430_1239937_+	NA	NA|166aa|up_6|NZ_CP012015.1_1240195_1240693_+	pfam12199, efb-c, Extracellular fibrinogen binding protein C terminal	NA|117aa|up_5|NZ_CP012015.1_1240846_1241197_+	pfam11546, CompInhib_SCIN, Staphylococcal complement inhibitor SCIN	NA|62aa|up_4|NZ_CP012015.1_1242018_1242204_-	NA	NA|78aa|up_3|NZ_CP012015.1_1242825_1243059_-	NA	NA|320aa|up_2|NZ_CP012015.1_1243535_1244495_-	TIGR01002, synergohymenotropic_toxin, beta-channel forming cytolysin	NA|49aa|up_1|NZ_CP012015.1_1245167_1245314_+	NA	NA|75aa|up_0|NZ_CP012015.1_1245270_1245495_+	NA	NA|239aa|down_0|NZ_CP012015.1_1245995_1246712_-	PRK13350, PRK13350, superantigen-like protein; Reviewed	NA|242aa|down_1|NZ_CP012015.1_1246819_1247545_-	PRK13349, PRK13349, superantigen-like protein; Reviewed	NA|334aa|down_2|NZ_CP012015.1_1248801_1249803_+	PRK04284, PRK04284, ornithine carbamoyltransferase; Provisional	NA|311aa|down_3|NZ_CP012015.1_1249825_1250758_+	PRK12353, PRK12353, putative amino acid kinase; Reviewed	NA|519aa|down_4|NZ_CP012015.1_1250929_1252486_+	COG1288, COG1288, Predicted membrane protein [Function unknown]	NA|76aa|down_5|NZ_CP012015.1_1252793_1253021_+	NA	NA|316aa|down_6|NZ_CP012015.1_1253325_1254273_-	cd09325, TDT_C4-dicarb_trans, C4-dicarboxylate transporters of the Tellurite-resistance/Dicarboxylate Transporter (TDT) family	NA|63aa|down_7|NZ_CP012015.1_1254521_1254710_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|45aa|down_8|NZ_CP012015.1_1255621_1255756_+	pfam05480, Staph_haemo, Staphylococcus haemolytic protein	NA|45aa|down_9|NZ_CP012015.1_1255812_1255947_+	pfam05480, Staph_haemo, Staphylococcus haemolytic protein
GCF_001515665.1_ASM151566v1	NZ_CP012015	Staphylococcus aureus subsp. aureus strain Gv51 chromosome, complete genome	8	2117620-2117698	8	CRISPRCasFinder	no	DEDDh	csa3,WYL,cas3,DEDDh,DinG	Unclear	AATTTCTCTATGTTGGGGCCCCG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas3,DEDDh,DinG	NA|92aa|up_5|NZ_CP012015.1_2111825_2112101_+,NA|129aa|up_1|NZ_CP012015.1_2116085_2116472_-,NA|138aa|down_1|NZ_CP012015.1_2119335_2119749_-,NA|37aa|down_2|NZ_CP012015.1_2119777_2119888_-,NA|31aa|down_6|NZ_CP012015.1_2122893_2122986_-	NA|177aa|up_9|NZ_CP012015.1_2109128_2109659_-	COG1607, COG1607, Acyl-CoA hydrolase [Lipid metabolism]	NA|419aa|up_8|NZ_CP012015.1_2109748_2111005_-	pfam02073, Peptidase_M29, Thermophilic metalloprotease (M29)	NA|67aa|up_7|NZ_CP012015.1_2111007_2111208_-	COG4840, COG4840, Uncharacterized protein conserved in bacteria [Function unknown]	NA|155aa|up_6|NZ_CP012015.1_2111354_2111819_+	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase	NA|92aa|up_5|NZ_CP012015.1_2111825_2112101_+	NA	NA|406aa|up_4|NZ_CP012015.1_2112378_2113596_+	COG1295, Rbn, Ribonuclease BN family enzyme [Replication, recombination, and repair]	NA|210aa|up_3|NZ_CP012015.1_2113711_2114341_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|234aa|up_2|NZ_CP012015.1_2115369_2116071_-	COG4758, COG4758, Predicted membrane protein [Function unknown]	NA|129aa|up_1|NZ_CP012015.1_2116085_2116472_-	NA	NA|253aa|up_0|NZ_CP012015.1_2116688_2117447_-	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|329aa|down_0|NZ_CP012015.1_2117918_2118905_+	COG4129, COG4129, Predicted membrane protein [Function unknown]	NA|138aa|down_1|NZ_CP012015.1_2119335_2119749_-	NA	NA|37aa|down_2|NZ_CP012015.1_2119777_2119888_-	NA	NA|244aa|down_3|NZ_CP012015.1_2119973_2120705_-	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only]	NA|438aa|down_4|NZ_CP012015.1_2120706_2122020_-	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane]	NA|167aa|down_5|NZ_CP012015.1_2122311_2122812_+	COG1528, Ftn, Ferritin-like protein [Inorganic ion transport and metabolism]	NA|31aa|down_6|NZ_CP012015.1_2122893_2122986_-	NA	DEDDh|185aa|down_7|NZ_CP012015.1_2123200_2123755_+	cd06130, DNA_pol_III_epsilon_like, an uncharacterized bacterial subgroup of the DEDDh 3'-5' exonuclease domain family with similarity to the epsilon subunit of DNA polymerase III	NA|357aa|down_8|NZ_CP012015.1_2123822_2124893_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|177aa|down_9|NZ_CP012015.1_2125139_2125670_-	pfam11667, DUF3267, Putative zincin peptidase
GCF_001515665.1_ASM151566v1	NZ_CP012015	Staphylococcus aureus subsp. aureus strain Gv51 chromosome, complete genome	9	2357806-2357956	9	CRISPRCasFinder	no	csa3	csa3,WYL,cas3,DEDDh,DinG	Type I-A	AACTTTAGTTGTTAGGGGCTCTTATGCA	28	0	0	NA	NA	NA	2	2	Orphan	csa3,WYL,cas3,DEDDh,DinG	NA|77aa|up_5|NZ_CP012015.1_2352677_2352908_-,NA|364aa|up_0|NZ_CP012015.1_2356696_2357788_+,NA|35aa|down_0|NZ_CP012015.1_2358287_2358392_-,NA|31aa|down_2|NZ_CP012015.1_2360503_2360596_+	NA|237aa|up_9|NZ_CP012015.1_2348287_2348998_+	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|148aa|up_8|NZ_CP012015.1_2349118_2349562_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|138aa|up_7|NZ_CP012015.1_2349761_2350175_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|458aa|up_6|NZ_CP012015.1_2350632_2352006_-	pfam01878, EVE, EVE domain	NA|77aa|up_5|NZ_CP012015.1_2352677_2352908_-	NA	NA|313aa|up_4|NZ_CP012015.1_2352938_2353877_-	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|222aa|up_3|NZ_CP012015.1_2354311_2354977_-	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	csa3|107aa|up_2|NZ_CP012015.1_2355128_2355449_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|327aa|up_1|NZ_CP012015.1_2355450_2356431_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|364aa|up_0|NZ_CP012015.1_2356696_2357788_+	NA	NA|35aa|down_0|NZ_CP012015.1_2358287_2358392_-	NA	NA|379aa|down_1|NZ_CP012015.1_2359078_2360215_-	pfam02037, SAP, SAP domain	NA|31aa|down_2|NZ_CP012015.1_2360503_2360596_+	NA	NA|286aa|down_3|NZ_CP012015.1_2361300_2362158_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|down_4|NZ_CP012015.1_2362225_2363008_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|602aa|down_5|NZ_CP012015.1_2363239_2365045_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|down_6|NZ_CP012015.1_2365725_2367264_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|down_7|NZ_CP012015.1_2367298_2369431_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|down_8|NZ_CP012015.1_2369442_2369877_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|369aa|down_9|NZ_CP012015.1_2369876_2370983_+	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional
GCF_001515665.1_ASM151566v1	NZ_CP012015	Staphylococcus aureus subsp. aureus strain Gv51 chromosome, complete genome	10	2483086-2483279	1	CRT	no		csa3,WYL,cas3,DEDDh,DinG	Orphan	TGTTGGGGCCCCGCCAACTTGCA	23	3	13	2483109-2483141|2483109-2483141|2483109-2483141|2483109-2483141|2483165-2483200|2483165-2483200|2483165-2483200|2483165-2483200|2483165-2483200|2483224-2483256|2483224-2483256|2483224-2483256|2483224-2483256	NZ_CP012015.1_1245754-1245722|NZ_CP012015.1_1456544-1456512|NZ_CP012015.1_1549196-1549228|NZ_CP012015.1_2758145-2758177|NZ_CP012015.1_1245701-1245666|NZ_CP012015.1_1960161-1960126|NZ_CP012015.1_312013-311978|NZ_CP012015.1_1774143-1774178|NZ_CP012015.1_2128341-2128376|NZ_CP012015.1_876517-876549|NZ_CP012015.1_1245754-1245722|NZ_CP012015.1_1456544-1456512|NZ_CP012015.1_2758145-2758177	NA	3	3	Orphan	csa3,WYL,cas3,DEDDh,DinG	NA|55aa|up_9|NZ_CP012015.1_2473613_2473778_+,NA|106aa|up_8|NZ_CP012015.1_2474022_2474340_+,NA|84aa|up_5|NZ_CP012015.1_2479464_2479716_+,NA|57aa|up_0|NZ_CP012015.1_2482855_2483026_+,NA	NA|55aa|up_9|NZ_CP012015.1_2473613_2473778_+	NA	NA|106aa|up_8|NZ_CP012015.1_2474022_2474340_+	NA	NA|1056aa|up_7|NZ_CP012015.1_2474526_2477694_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|422aa|up_6|NZ_CP012015.1_2477810_2479076_-	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis]	NA|84aa|up_5|NZ_CP012015.1_2479464_2479716_+	NA	NA|255aa|up_4|NZ_CP012015.1_2479707_2480472_-	pfam13468, Glyoxalase_3, Glyoxalase-like domain	NA|147aa|up_3|NZ_CP012015.1_2480633_2481074_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|404aa|up_2|NZ_CP012015.1_2481066_2482278_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|117aa|up_1|NZ_CP012015.1_2482379_2482730_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|57aa|up_0|NZ_CP012015.1_2482855_2483026_+	NA	NA|341aa|down_0|NZ_CP012015.1_2483420_2484443_-	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial	NA|200aa|down_1|NZ_CP012015.1_2484462_2485062_-	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed	NA|78aa|down_2|NZ_CP012015.1_2485068_2485302_-	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins	NA|149aa|down_3|NZ_CP012015.1_2485307_2485754_-	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|162aa|down_4|NZ_CP012015.1_2485767_2486253_-	COG1763, MobB, Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]	NA|420aa|down_5|NZ_CP012015.1_2486249_2487509_-	cd00887, MoeA, MoeA family	NA|165aa|down_6|NZ_CP012015.1_2487571_2488066_+	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|169aa|down_7|NZ_CP012015.1_2488067_2488574_-	COG0521, MoaB, Molybdopterin biosynthesis enzymes [Coenzyme metabolism]	NA|335aa|down_8|NZ_CP012015.1_2488604_2489609_-	PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated	NA|202aa|down_9|NZ_CP012015.1_2489778_2490384_-	COG4148, ModC, ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
GCF_001515665.1_ASM151566v1	NZ_CP012015	Staphylococcus aureus subsp. aureus strain Gv51 chromosome, complete genome	11	2980913-2980996	10	CRISPRCasFinder	no		csa3,WYL,cas3,DEDDh,DinG	Orphan	TTTCGAAATTCTCTGTGTTGGGACCC	26	1	3	2980939-2980970|2980939-2980970|2980939-2980970	NZ_CP012015.1_876617-876648|NZ_CP012015.1_1127407-1127438|NZ_CP012015.1_1549240-1549271	NA	1	1	Orphan	csa3,WYL,cas3,DEDDh,DinG	NA|64aa|up_7|NZ_CP012015.1_2974864_2975056_+,NA|166aa|up_6|NZ_CP012015.1_2976142_2976640_-,NA	NA|253aa|up_9|NZ_CP012015.1_2972144_2972903_+	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|627aa|up_8|NZ_CP012015.1_2972892_2974773_+	pfam02687, FtsX, FtsX-like permease family	NA|64aa|up_7|NZ_CP012015.1_2974864_2975056_+	NA	NA|166aa|up_6|NZ_CP012015.1_2976142_2976640_-	NA	NA|250aa|up_5|NZ_CP012015.1_2976641_2977391_-	pfam15526, Ntox21, Novel toxin 21	NA|268aa|up_4|NZ_CP012015.1_2977409_2978213_-	cd07477, Peptidases_S8_Subtilisin_subset, Peptidase S8 family domain in Subtilisin proteins	NA|67aa|up_3|NZ_CP012015.1_2978696_2978897_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|190aa|up_2|NZ_CP012015.1_2979023_2979593_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|132aa|up_1|NZ_CP012015.1_2979845_2980241_-	pfam11345, DUF3147, Protein of unknown function (DUF3147)	NA|118aa|up_0|NZ_CP012015.1_2980308_2980662_-	pfam11345, DUF3147, Protein of unknown function (DUF3147)	NA|280aa|down_0|NZ_CP012015.1_2981214_2982054_-	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein	NA|240aa|down_1|NZ_CP012015.1_2982096_2982816_-	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA|626aa|down_2|NZ_CP012015.1_2982815_2984693_-	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA|460aa|down_3|NZ_CP012015.1_2984759_2986139_-	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA|118aa|down_4|NZ_CP012015.1_2986282_2986636_-	PRK00499, rnpA, ribonuclease P; Reviewed	NA|46aa|down_5|NZ_CP012015.1_2986755_2986893_-	pfam00468, Ribosomal_L34, Ribosomal protein L34	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
