assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001514355.1_ASM151435v1	NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	1	443413-443539	1	CRISPRCasFinder	no		DEDDh,cas3,DinG,csa3,WYL,RT	Orphan	GGGGGGCAGCTAGCGTGCGAAGCGCGCGCGGCGTGGGGGC	40	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,DinG,csa3,WYL,RT	NA,NA	NA|262aa|up_9|NZ_CP013923.1_434564_435350_+	PRK11365, ssuC, aliphatic sulfonate ABC transporter permease SsuC	NA|410aa|up_8|NZ_CP013923.1_435375_436605_+	cd01163, DszC, Dibenzothiophene (DBT) desulfurization enzyme C	NA|270aa|up_7|NZ_CP013923.1_436633_437443_+	PRK11153, metN, DL-methionine transporter ATP-binding subunit; Provisional	NA|221aa|up_6|NZ_CP013923.1_437442_438105_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|278aa|up_5|NZ_CP013923.1_438121_438955_+	cd13599, PBP2_lipoprotein_Gna1946, The membrane-associated lipoprotein Gna1946 from Neisseria meningitidis; the type 2 periplasmic binding protein fold	NA|302aa|up_4|NZ_CP013923.1_438980_439886_+	PRK11247, ssuB, aliphatic sulfonates transport ATP-binding subunit; Provisional	NA|72aa|up_3|NZ_CP013923.1_439978_440194_+	COG3585, MopI, Molybdopterin-binding protein [Coenzyme metabolism]	NA|315aa|up_2|NZ_CP013923.1_440533_441478_+	TIGR03866, PQQ_ABC_repeats, PQQ-dependent catabolism-associated beta-propeller protein	NA|265aa|up_1|NZ_CP013923.1_441461_442256_+	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins	NA|338aa|up_0|NZ_CP013923.1_442258_443272_+	COG3000, ERG3, Sterol desaturase [Lipid metabolism]	NA|166aa|down_0|NZ_CP013923.1_443541_444039_-	COG1607, COG1607, Acyl-CoA hydrolase [Lipid metabolism]	NA|513aa|down_1|NZ_CP013923.1_444116_445655_-	COG5361, COG5361, Uncharacterized conserved protein [Function unknown]	NA|1023aa|down_2|NZ_CP013923.1_445927_448996_+	TIGR01553, Formate_dehydrogenase_major_subunit, formate dehydrogenase-N alpha subunit	NA|300aa|down_3|NZ_CP013923.1_449006_449906_+	TIGR01582, Formate_dehydrogenase_iron-sulfur_subunit, formate dehydrogenase, beta subunit, Fe-S containing	NA|216aa|down_4|NZ_CP013923.1_449898_450546_+	PRK10639, PRK10639, formate dehydrogenase cytochrome b556 subunit	NA|312aa|down_5|NZ_CP013923.1_450672_451608_+	pfam04216, FdhE, Protein involved in formate dehydrogenase formation	NA|487aa|down_6|NZ_CP013923.1_451610_453071_+	PRK04311, PRK04311, selenocysteine synthase; Provisional	NA|646aa|down_7|NZ_CP013923.1_453067_455005_+	PRK10512, PRK10512, selenocysteinyl-tRNA-specific translation factor; Provisional	NA|344aa|down_8|NZ_CP013923.1_455318_456350_+	PRK10073, PRK10073, putative glycosyl transferase; Provisional	NA|180aa|down_9|NZ_CP013923.1_456413_456953_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins
GCF_001514355.1_ASM151435v1	NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	2	5815846-5815933	2	CRISPRCasFinder	no		DEDDh,cas3,DinG,csa3,WYL,RT	Orphan	AGGGGGCGACACCTGCAGACCGG	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,DinG,csa3,WYL,RT	NA,NA|112aa|down_9|NZ_CP013923.1_5822631_5822967_+	NA|622aa|up_9|NZ_CP013923.1_5800324_5802190_-	PRK12448, PRK12448, dihydroxy-acid dehydratase; Provisional	NA|275aa|up_8|NZ_CP013923.1_5802291_5803116_-	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain	NA|346aa|up_7|NZ_CP013923.1_5803600_5804638_+	PRK03739, PRK03739, 2-isopropylmalate synthase; Validated	NA|297aa|up_6|NZ_CP013923.1_5804585_5805476_-	cd05466, PBP2_LTTR_substrate, The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily	NA|183aa|up_5|NZ_CP013923.1_5805611_5806160_+	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]	NA|394aa|up_4|NZ_CP013923.1_5806156_5807338_+	cd17355, MFS_YcxA_like, MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters	NA|238aa|up_3|NZ_CP013923.1_5809272_5809986_-	pfam06508, QueC, Queuosine biosynthesis protein QueC	NA|949aa|up_2|NZ_CP013923.1_5810157_5813004_+	PRK00009, PRK00009, phosphoenolpyruvate carboxylase; Reviewed	NA|312aa|up_1|NZ_CP013923.1_5813352_5814288_+	PRK06130, PRK06130, 3-hydroxybutyryl-CoA dehydrogenase; Validated	NA|447aa|up_0|NZ_CP013923.1_5814473_5815814_+	COG2031, AtoE, Short chain fatty acids transporter [Lipid metabolism]	NA|243aa|down_0|NZ_CP013923.1_5816031_5816760_+	PRK07577, PRK07577, SDR family oxidoreductase	NA|261aa|down_1|NZ_CP013923.1_5816810_5817593_-	TIGR02431, p-hydroxybenzoate_hydroxylase_transcriptional, beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family	NA|230aa|down_2|NZ_CP013923.1_5817762_5818452_+	TIGR02429, 3-oxoadipate_CoA-transferase_subunit_A, 3-oxoacid CoA-transferase, A subunit	NA|215aa|down_3|NZ_CP013923.1_5818448_5819093_+	TIGR02428, 3-oxoadipate_CoA-transferase_subunit_B, 3-oxoacid CoA-transferase, B subunit	NA|92aa|down_4|NZ_CP013923.1_5819146_5819422_+	TIGR03221, muco_delta, muconolactone delta-isomerase	NA|99aa|down_5|NZ_CP013923.1_5819434_5819731_+	PRK12863, PRK12863, YciI-like protein; Reviewed	NA|260aa|down_6|NZ_CP013923.1_5819786_5820566_+	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|347aa|down_7|NZ_CP013923.1_5820569_5821610_+	pfam04199, Cyclase, Putative cyclase	NA|124aa|down_8|NZ_CP013923.1_5821791_5822163_-	PRK11505, PRK11505, phosphate starvation-inducible protein PsiF	NA|112aa|down_9|NZ_CP013923.1_5822631_5822967_+	NA
GCF_001514355.1_ASM151435v1	NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	3	6043527-6043634	3	CRISPRCasFinder	no		DEDDh,cas3,DinG,csa3,WYL,RT	Orphan	GAAGGCGGCTTCCGTGGCGGCGACCGC	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,DinG,csa3,WYL,RT	NA|190aa|up_4|NZ_CP013923.1_6028347_6028917_-,NA|227aa|up_3|NZ_CP013923.1_6028986_6029667_-,NA|199aa|up_2|NZ_CP013923.1_6029974_6030571_-,NA	NA|283aa|up_9|NZ_CP013923.1_6023390_6024239_-	COG3755, COG3755, Uncharacterized protein conserved in bacteria [Function unknown]	NA|390aa|up_8|NZ_CP013923.1_6024262_6025432_-	COG3904, COG3904, Predicted periplasmic protein [Function unknown]	NA|221aa|up_7|NZ_CP013923.1_6025615_6026278_-	pfam01520, Amidase_3, N-acetylmuramoyl-L-alanine amidase	NA|262aa|up_6|NZ_CP013923.1_6026687_6027473_+	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional	NA|221aa|up_5|NZ_CP013923.1_6027650_6028313_+	cd19365, TenA_C-like, uncharacterized TenA_C proteins	NA|190aa|up_4|NZ_CP013923.1_6028347_6028917_-	NA	NA|227aa|up_3|NZ_CP013923.1_6028986_6029667_-	NA	NA|199aa|up_2|NZ_CP013923.1_6029974_6030571_-	NA	NA|583aa|up_1|NZ_CP013923.1_6038891_6040640_-	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion]	NA|254aa|up_0|NZ_CP013923.1_6040915_6041677_+	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional	NA|394aa|down_0|NZ_CP013923.1_6043816_6044998_+	COG1565, COG1565, Uncharacterized conserved protein [Function unknown]	NA|368aa|down_1|NZ_CP013923.1_6045007_6046111_-	PRK13297, PRK13297, tRNA CCA-pyrophosphorylase; Provisional	NA|690aa|down_2|NZ_CP013923.1_6046107_6048177_-	cd13401, Slt70-like, 70kDa soluble lytic transglycosylase (Slt70) and similar proteins	NA|226aa|down_3|NZ_CP013923.1_6048453_6049131_+	TIGR02727, Uncharacterized_protein_YqgN, 5,10-methenyltetrahydrofolate synthetase	NA|477aa|down_4|NZ_CP013923.1_6049551_6050982_+	COG2308, COG2308, Uncharacterized conserved protein [Function unknown]	NA|331aa|down_5|NZ_CP013923.1_6050984_6051977_+	pfam04168, Alpha-E, A predicted alpha-helical domain with a conserved ER motif	NA|268aa|down_6|NZ_CP013923.1_6051990_6052794_+	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism]	NA|288aa|down_7|NZ_CP013923.1_6052849_6053713_+	cd03765, proteasome_beta_bacterial, Bacterial proteasome, beta subunit	NA|333aa|down_8|NZ_CP013923.1_6053868_6054867_+	cd13576, PBP2_BugD_Asp, Aspartic acid transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold	NA|281aa|down_9|NZ_CP013923.1_6055034_6055877_-	TIGR00676, 510-methylenetetrahydrofolate_reductase
