The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	0	11525	6226215		Cafeteria_roenbergensis_virus(33.33%)	8	NA	NA
WP_020925808.1|2390_6503_-	DNA-directed RNA polymerase subunit beta	NA	E3T4Z4	Cafeteria_roenbergensis_virus	20.9	3.6e-22
WP_006389590.1|6666_7047_-	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
WP_006389589.1|7128_7653_-	50S ribosomal protein L10	NA	NA	NA	NA	NA
WP_006389588.1|7923_8625_-	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_006389587.1|8627_9059_-	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_006389586.1|9120_9654_-	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	31.2	1.3e-12
WP_006389585.1|9663_10044_-	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_054495833.1|10334_11525_-	elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	29.5	3.1e-14
>prophage 2
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	18257	19265	6226215		Bacillus_virus(100.0%)	1	NA	NA
WP_059268685.1|18257_19265_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.3	1.2e-27
>prophage 3
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	28398	30990	6226215		Bifidobacterium_phage(50.0%)	3	NA	NA
WP_026382435.1|28398_29316_-	ParB/RepB/Spo0J family partition protein	NA	I3NLC2	Bifidobacterium_phage	38.0	2.8e-15
WP_059268696.1|29361_30177_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_049077304.1|30189_30990_-	ParA family protein	NA	Q8JL10	Natrialba_phage	34.3	7.3e-20
>prophage 4
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	36090	36297	6226215		Lake_Baikal_phage(100.0%)	1	NA	NA
WP_006389561.1|36090_36297_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.5	2.8e-16
>prophage 5
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	51961	67876	6226215		Bacillus_virus(42.86%)	14	NA	NA
WP_054504527.1|51961_52957_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	27.8	2.1e-08
WP_082707096.1|52953_53970_+	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	32.0	1.6e-16
WP_059268715.1|54102_55305_+	amidohydrolase	NA	NA	NA	NA	NA
WP_059268717.1|55529_56444_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_059268719.1|56475_56670_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049077340.1|56783_57710_+	cysteine synthase family protein	NA	A0A1X9I5F1	Streptococcus_phage	35.6	7.4e-32
WP_059268722.1|58011_59457_-	catalase	NA	A0A2K9L0T1	Tupanvirus	48.2	5.8e-108
WP_054418853.1|59724_61413_-	membrane protein insertase YidC	NA	NA	NA	NA	NA
WP_100503281.1|61461_61734_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	45.9	9.1e-15
WP_026382422.1|61781_62153_-	ribonuclease P protein component	NA	NA	NA	NA	NA
WP_003816025.1|62199_62334_-	50S ribosomal protein L34	NA	NA	NA	NA	NA
WP_049070320.1|62760_64221_+	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
WP_049077351.1|64223_65333_+	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	32.6	1.1e-42
WP_054418851.1|65428_67876_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	34.9	8.3e-115
>prophage 6
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	78851	79586	6226215		Planktothrix_phage(100.0%)	1	NA	NA
WP_049070339.1|78851_79586_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.9	5.0e-31
>prophage 7
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	85973	87044	6226215		Planktothrix_phage(100.0%)	1	NA	NA
WP_054418837.1|85973_87044_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.5	1.8e-29
>prophage 8
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	92824	93763	6226215		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_059268742.1|92824_93763_+	glyoxylate/hydroxypyruvate reductase A	NA	M1HUW8	Acanthocystis_turfacea_Chlorella_virus	22.8	4.6e-05
>prophage 9
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	103035	104091	6226215		Bacillus_virus(100.0%)	1	NA	NA
WP_059268750.1|103035_104091_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.8	5.5e-31
>prophage 10
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	112315	123727	6226215		Moraxella_phage(100.0%)	1	NA	NA
WP_059268757.1|112315_123727_+	hemagglutinin repeat-containing protein	NA	A0A0R6PJK4	Moraxella_phage	35.9	2.1e-27
>prophage 11
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	132478	134008	6226215		Organic_Lake_phycodnavirus(100.0%)	1	NA	NA
WP_059268767.1|132478_134008_-	ABC transporter ATP-binding protein	NA	F2Y1V6	Organic_Lake_phycodnavirus	25.8	2.0e-05
>prophage 12
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	142243	142963	6226215		Staphylococcus_phage(100.0%)	1	NA	NA
WP_059268777.1|142243_142963_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	41.1	5.9e-37
>prophage 13
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	146135	154334	6226215		Ostreococcus_tauri_virus(33.33%)	6	NA	NA
WP_156430264.1|146135_147956_+	biosynthetic-type acetolactate synthase large subunit	NA	E4WLQ6	Ostreococcus_tauri_virus	29.6	5.9e-57
WP_082707102.1|148061_148844_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_054418774.1|148858_149713_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_020925717.1|149720_150491_-	ABC transporter ATP-binding protein	NA	A0A1M7XV31	Cedratvirus	31.0	5.6e-17
WP_049070409.1|150493_151549_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_054485405.1|151682_154334_-	DNA topoisomerase III	NA	A0A2P1ELA0	Moumouvirus	24.2	1.1e-19
>prophage 14
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	163325	164063	6226215		Planktothrix_phage(100.0%)	1	NA	NA
WP_059268792.1|163325_164063_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.4	3.9e-28
>prophage 15
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	167597	168791	6226215		Klosneuvirus(100.0%)	1	NA	NA
WP_059268799.1|167597_168791_+	acetylornithine transaminase	NA	A0A1V0SKB7	Klosneuvirus	24.1	3.2e-19
>prophage 16
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	186187	194689	6226215		Moraxella_phage(100.0%)	1	NA	NA
WP_059268823.1|186187_194689_+	filamentous hemagglutinin N-terminal domain-containing protein	NA	A0A0R6PJK4	Moraxella_phage	37.0	4.9e-29
>prophage 17
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	209209	210817	6226215		Pike_perch_iridovirus(100.0%)	1	NA	NA
WP_006386958.1|209209_210817_-	methylcrotonoyl-CoA carboxylase	NA	A0A1B2ITV7	Pike_perch_iridovirus	57.3	2.4e-22
>prophage 18
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	219529	219862	6226215		uncultured_virus(100.0%)	1	NA	NA
WP_174539031.1|219529_219862_-	YnfA family protein	NA	A0A218MNG8	uncultured_virus	53.3	5.3e-25
>prophage 19
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	233867	234923	6226215		Planktothrix_phage(100.0%)	1	NA	NA
WP_059268856.1|233867_234923_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.4	1.4e-23
>prophage 20
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	248191	252100	6226215		Tupanvirus(50.0%)	3	NA	NA
WP_049070505.1|248191_249799_-	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_049070507.1|249910_250540_-	LysE family transporter	NA	NA	NA	NA	NA
WP_059268869.1|250585_252100_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.1	2.4e-43
>prophage 21
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	256721	258449	6226215		Mycoplasma_phage(100.0%)	1	NA	NA
WP_049070514.1|256721_258449_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	32.6	1.3e-08
>prophage 22
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	262404	269980	6226215		Moraxella_phage(33.33%)	7	NA	NA
WP_049070517.1|262404_263793_-	GTPase/DUF3482 domain-containing protein	NA	A0A0R6PKD4	Moraxella_phage	38.9	1.5e-52
WP_049070518.1|263785_265216_-	DUF2868 domain-containing protein	NA	NA	NA	NA	NA
WP_059268879.1|265283_266171_-	helix-turn-helix domain-containing protein	NA	A0A291LAM3	Bordetella_phage	35.3	1.5e-10
WP_049070520.1|266340_267234_+	EamA family transporter	NA	NA	NA	NA	NA
WP_059268881.1|267237_268446_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_059268883.1|268495_268969_-	RidA family protein	NA	NA	NA	NA	NA
WP_059268886.1|269077_269980_-	transcriptional regulator GcvA	NA	Q6JIH3	Burkholderia_virus	35.4	6.7e-30
>prophage 23
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	282107	284603	6226215		uncultured_Mediterranean_phage(100.0%)	3	NA	NA
WP_049070553.1|282107_283268_+	trypsin-like peptidase domain-containing protein	NA	A0A1B1IRD3	uncultured_Mediterranean_phage	36.5	3.1e-11
WP_054418384.1|283313_283706_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_054503741.1|283811_284603_-	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	33.1	1.6e-27
>prophage 24
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	294963	295761	6226215		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_059272880.1|294963_295761_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	32.8	4.1e-23
>prophage 25
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	298797	299634	6226215		Cedratvirus(100.0%)	1	NA	NA
WP_049070585.1|298797_299634_-	ABC transporter ATP-binding protein	NA	A0A285PWH2	Cedratvirus	31.4	4.8e-14
>prophage 26
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	322631	331667	6226215		Salicola_phage(33.33%)	6	NA	NA
WP_006388088.1|322631_323516_+	RNA polymerase sigma factor RpoH	NA	A0A248SJA5	Salicola_phage	37.5	3.5e-39
WP_059268925.1|323843_324683_-	3',5'-cyclic-AMP phosphodiesterase	NA	NA	NA	NA	NA
WP_059268927.1|324872_327683_+	cation:proton antiporter	NA	A0A2H4J178	uncultured_Caudovirales_phage	29.5	9.8e-11
WP_059268928.1|327702_328509_-	NUDIX domain-containing protein	NA	NA	NA	NA	NA
WP_049070634.1|328803_329961_+	cytochrome c oxidase subunit II	NA	NA	NA	NA	NA
WP_049070636.1|330059_331667_+	cytochrome c oxidase subunit I	NA	R9VX24	Flavobacterium_phage	40.9	7.3e-11
>prophage 27
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	339354	347108	6226215		Chrysochromulina_ericina_virus(33.33%)	6	NA	NA
WP_049070648.1|339354_340728_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A0N7G7P8	Chrysochromulina_ericina_virus	34.7	2.1e-30
WP_068951047.1|340724_342116_+	MFS transporter	NA	NA	NA	NA	NA
WP_059268936.1|342227_343550_+	UDP-glucose/GDP-mannose dehydrogenase family protein	NA	A0A127AXI2	Bacillus_phage	38.5	4.8e-77
WP_049070652.1|343546_344608_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_059268938.1|344635_345124_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_049070654.1|345275_347108_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	48.1	2.5e-156
>prophage 28
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	362293	365476	6226215		Klosneuvirus(50.0%)	2	NA	NA
WP_059268958.1|362293_363364_+	ornithine cyclodeaminase	NA	A0A1V0SL93	Klosneuvirus	50.7	9.6e-92
WP_082707111.1|363376_365476_-	EAL domain-containing protein	NA	A0A127AWB9	Bacillus_phage	35.0	2.4e-14
>prophage 29
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	372725	373757	6226215		Shigella_phage(100.0%)	1	NA	NA
WP_059268969.1|372725_373757_-	glycosyltransferase family 2 protein	NA	U5P087	Shigella_phage	45.9	9.0e-71
>prophage 30
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	380357	381047	6226215		Bacillus_phage(100.0%)	1	NA	NA
WP_020925543.1|380357_381047_+	heavy metal response regulator transcription factor	NA	W8CYM9	Bacillus_phage	37.0	1.3e-33
>prophage 31
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	385012	386122	6226215		Synechococcus_phage(100.0%)	1	NA	NA
WP_049070720.1|385012_386122_-	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	29.3	4.0e-32
>prophage 32
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	391288	392818	6226215		Catovirus(100.0%)	1	NA	NA
WP_059268993.1|391288_392818_+	histidine ammonia-lyase	NA	A0A1V0S940	Catovirus	37.0	1.8e-83
>prophage 33
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	397395	398805	6226215		Mycobacterium_phage(100.0%)	1	NA	NA
WP_049070737.1|397395_398805_-	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	28.4	3.1e-21
>prophage 34
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	419577	421287	6226215		Bacillus_virus(100.0%)	1	NA	NA
WP_059269016.1|419577_421287_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.2	6.8e-07
>prophage 35
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	436633	439886	6226215		Bacillus_virus(100.0%)	4	NA	NA
WP_054419207.1|436633_437443_+	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	33.5	9.4e-23
WP_006387310.1|437442_438105_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_059269037.1|438121_438955_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059269039.1|438980_439886_+	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	35.4	7.7e-26
>prophage 36
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	453067	455005	6226215		Tupanvirus(100.0%)	1	NA	NA
WP_059269051.1|453067_455005_+	selenocysteine-specific translation elongation factor	NA	A0A2K9KZ60	Tupanvirus	30.6	1.2e-15
>prophage 37
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	468124	472099	6226215		Acinetobacter_phage(75.0%)	4	NA	NA
WP_054419334.1|468124_468913_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	51.9	2.4e-63
WP_049070803.1|468909_469941_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.4	1.1e-71
WP_049077392.1|469953_470520_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	59.9	2.6e-64
WP_024067527.1|470578_472099_-	anthranilate synthase component I	NA	A0A0B5J984	Pandoravirus	32.8	2.1e-44
>prophage 38
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	477735	481264	6226215	tRNA	Paramecium_bursaria_Chlorella_virus(33.33%)	4	NA	NA
WP_059269064.1|477735_478692_+	D-2-hydroxyacid dehydrogenase family protein	NA	M1HMI7	Paramecium_bursaria_Chlorella_virus	28.2	4.2e-14
WP_059269066.1|478860_479877_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	65.3	2.2e-93
WP_006392515.1|479879_480239_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_059269068.1|480361_481264_+	NAD(P)/FAD-dependent oxidoreductase	NA	A0A1W6JNB4	Lactococcus_phage	23.9	1.4e-06
>prophage 39
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	506290	508354	6226215		Bacillus_phage(100.0%)	1	NA	NA
WP_059269091.1|506290_508354_+	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	37.3	3.6e-103
>prophage 40
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	517471	518482	6226215		Bacillus_virus(100.0%)	1	NA	NA
WP_059269100.1|517471_518482_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.0	2.9e-13
>prophage 41
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	552085	552778	6226215		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_059272890.1|552085_552778_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	25.4	1.5e-05
>prophage 42
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	558768	559290	6226215		Tupanvirus(100.0%)	1	NA	NA
WP_059269142.1|558768_559290_-	lipocalin family protein	NA	A0A2K9L662	Tupanvirus	35.6	3.3e-21
>prophage 43
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	570300	571236	6226215		Only_Syngen_Nebraska_virus(100.0%)	1	NA	NA
WP_059269158.1|570300_571236_-	hydroxyacid dehydrogenase	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	29.5	7.8e-21
>prophage 44
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	587931	589131	6226215		Catovirus(100.0%)	1	NA	NA
WP_059269172.1|587931_589131_-	phosphoglycerate dehydrogenase	NA	A0A1V0SBV6	Catovirus	43.1	7.7e-90
>prophage 45
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	594441	605490	6226215		Bacillus_phage(33.33%)	11	NA	NA
WP_054418990.1|594441_595128_-	heavy metal response regulator transcription factor	NA	W8CYM9	Bacillus_phage	34.2	1.1e-32
WP_049070940.1|595192_596500_-	phosphate regulon sensor histidine kinase PhoR	NA	A0A1V0SGX0	Hokovirus	25.1	8.0e-16
WP_006386862.1|596512_597211_-	phosphate regulon transcriptional regulator PhoB	NA	W8CYM9	Bacillus_phage	37.6	1.3e-33
WP_049070942.1|597372_598149_+	bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA	NA	NA	NA	NA
WP_049070943.1|598328_599330_+	Tim44 domain-containing protein	NA	NA	NA	NA	NA
WP_049070944.1|599525_600164_+	SCP2 sterol-binding domain-containing protein	NA	NA	NA	NA	NA
WP_054418997.1|600167_601721_+	ubiquinone biosynthesis regulatory protein kinase UbiB	NA	A0A2N9QVT9	Dishui_lake_phycodnavirus	30.0	6.0e-34
WP_049070947.1|601904_602783_+	ferritin	NA	NA	NA	NA	NA
WP_054418999.1|602872_603361_+	adenylyltransferase/cytidyltransferase family protein	NA	A0A1B1IUK5	uncultured_Mediterranean_phage	34.8	8.4e-19
WP_049070950.1|603376_604708_-	TolC family outer membrane protein	NA	NA	NA	NA	NA
WP_006386870.1|604809_605490_-	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	35.4	4.6e-15
>prophage 46
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	611177	614951	6226215		Dickeya_phage(100.0%)	1	NA	NA
WP_059269187.1|611177_614951_+	methionine synthase	NA	A0A140XBC7	Dickeya_phage	47.7	4.2e-09
>prophage 47
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	620315	623836	6226215		Bacillus_phage(33.33%)	3	NA	NA
WP_059272893.1|620315_621047_+	amino acid ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.7	2.8e-10
WP_049070960.1|621074_622286_+	D-galactonate dehydratase family protein	NA	Q6A202	Oenococcus_phage	27.8	2.3e-41
WP_059269197.1|622273_623836_+	mannitol dehydrogenase family protein	NA	H8ZJP8	Ostreococcus_tauri_virus	28.9	6.2e-39
>prophage 48
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	635683	640952	6226215		Organic_Lake_phycodnavirus(33.33%)	5	NA	NA
WP_049070973.1|635683_636397_-	ATP-binding cassette domain-containing protein	NA	F2Y165	Organic_Lake_phycodnavirus	24.0	3.7e-07
WP_006386905.1|636713_637730_+	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	41.5	1.2e-70
WP_054483562.1|637855_639046_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_059269209.1|639047_640151_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_049070976.1|640211_640952_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.9	4.1e-33
>prophage 49
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	678039	681862	6226215		Mycoplasma_phage(50.0%)	3	NA	NA
WP_049071026.1|678039_679161_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	48.9	2.1e-17
WP_059269230.1|679165_680602_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_059269231.1|680899_681862_-	Nudix family hydrolase	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	39.3	3.8e-07
>prophage 50
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	689486	690991	6226215		Cedratvirus(50.0%)	2	NA	NA
WP_059269233.1|689486_690287_+	ABC transporter ATP-binding protein	NA	A0A2R8FFL6	Cedratvirus	23.9	2.4e-10
WP_006388550.1|690286_690991_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.0	3.7e-07
>prophage 51
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	694177	697591	6226215		Bacillus_phage(100.0%)	2	NA	NA
WP_049071051.1|694177_694975_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	37.0	4.7e-19
WP_059269235.1|694975_697591_+	GGDEF and EAL domain-containing protein	NA	A0A127AWB9	Bacillus_phage	33.5	1.5e-16
>prophage 52
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	704047	705688	6226215		Staphylococcus_phage(100.0%)	1	NA	NA
WP_059269239.1|704047_705688_+	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	31.4	1.2e-53
>prophage 53
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	716232	716973	6226215		Bacillus_phage(100.0%)	1	NA	NA
WP_054419374.1|716232_716973_+	lytic transglycosylase domain-containing protein	NA	A0A1P8CWQ1	Bacillus_phage	45.7	3.0e-20
>prophage 54
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	725342	726068	6226215		Planktothrix_phage(100.0%)	1	NA	NA
WP_059269248.1|725342_726068_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.4	6.8e-33
>prophage 55
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	737034	738123	6226215		Bacillus_virus(100.0%)	1	NA	NA
WP_059269252.1|737034_738123_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.0	4.6e-25
>prophage 56
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	741329	747458	6226215		Ectocarpus_siliculosus_virus(50.0%)	3	NA	NA
WP_059269254.1|741329_743816_-	extracellular solute-binding protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.9	2.0e-07
WP_049071115.1|743802_744474_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_054416249.1|745550_747458_-	RNB domain-containing ribonuclease	NA	Q0GXV6	Lactococcus_phage	36.4	7.1e-05
>prophage 57
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	758771	767302	6226215		Pseudomonas_phage(75.0%)	6	NA	NA
WP_054416258.1|758771_759899_+	cytochrome c552	NA	A0A125RNP0	Pseudomonas_phage	33.1	1.6e-25
WP_059269260.1|759915_761358_+	D-alanine--poly(phosphoribitol) ligase	NA	A0A2K9L3I8	Tupanvirus	26.4	6.6e-27
WP_049071142.1|761443_762004_-	YggT family protein	NA	NA	NA	NA	NA
WP_081330447.1|762173_762806_-	histone H1-like DNA-binding protein	NA	NA	NA	NA	NA
WP_054416260.1|763151_764351_-	ribonucleotide-diphosphate reductase subunit beta	NA	A0A2H4P762	Pseudomonas_phage	28.0	8.7e-33
WP_049071145.1|764371_767302_-	ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4P767	Pseudomonas_phage	44.0	4.4e-171
>prophage 58
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	782889	783702	6226215		Bacillus_virus(100.0%)	1	NA	NA
WP_059269267.1|782889_783702_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	37.0	2.2e-32
>prophage 59
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	792530	794029	6226215		Brazilian_cedratvirus(50.0%)	2	NA	NA
WP_049071173.1|792530_793319_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	26.0	2.4e-15
WP_006388640.1|793315_794029_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.2	2.7e-13
>prophage 60
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	797380	800459	6226215		Lake_Baikal_phage(50.0%)	3	NA	NA
WP_006388644.1|797380_797752_+	iron-sulfur cluster insertion protein ErpA	NA	A0A2H4N7M3	Lake_Baikal_phage	58.3	2.8e-30
WP_059269271.1|797857_798967_-	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA	NA
WP_049071177.1|799046_800459_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A8ATH6	Listeria_phage	43.8	4.6e-17
>prophage 61
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	803600	808560	6226215		Aeromonas_phage(50.0%)	5	NA	NA
WP_049071180.1|803600_804851_+	serine hydroxymethyltransferase	NA	A0A219YCZ0	Aeromonas_phage	52.5	5.6e-99
WP_006392798.1|805057_805537_+	transcriptional repressor NrdR	NA	NA	NA	NA	NA
WP_144419194.1|805663_806623_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_049071182.1|806635_807205_-	isochorismatase family protein	NA	NA	NA	NA	NA
WP_156430376.1|807444_808560_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	32.7	4.9e-38
>prophage 62
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	871214	879988	6226215		Salmonella_phage(50.0%)	7	NA	NA
WP_054503493.1|871214_872633_-	transglycosylase SLT domain-containing protein	NA	A0A140XFP7	Salmonella_phage	33.9	1.8e-05
WP_049071277.1|872640_873462_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_049071278.1|873483_874263_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_049071280.1|874312_874774_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	47.9	7.2e-36
WP_059269300.1|875025_876114_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_059269301.1|876144_879261_+	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	23.3	1.9e-76
WP_049071285.1|879265_879988_+	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	38.9	2.4e-38
>prophage 63
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	885004	886057	6226215		Enterobacteria_phage(100.0%)	1	NA	NA
WP_049071292.1|885004_886057_+	glycosyltransferase family 2 protein	NA	A0A075B8F6	Enterobacteria_phage	39.9	2.3e-61
>prophage 64
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	894250	897848	6226215		Staphylococcus_phage(66.67%)	4	NA	NA
WP_049071301.1|894250_894970_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.3	3.1e-09
WP_049077448.1|894962_895718_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	9.7e-14
WP_054503510.1|895794_896706_-	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
WP_049077449.1|896960_897848_-	alpha/beta fold hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.5	1.3e-06
>prophage 65
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	904408	906520	6226215		Streptococcus_phage(100.0%)	1	NA	NA
WP_049071316.1|904408_906520_+	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	27.2	1.9e-62
>prophage 66
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	909778	910582	6226215		Staphylococcus_phage(100.0%)	1	NA	NA
WP_059269308.1|909778_910582_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.0	4.3e-12
>prophage 67
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	923953	924883	6226215		Streptococcus_phage(100.0%)	1	NA	NA
WP_054416337.1|923953_924883_+	glyoxylate/hydroxypyruvate reductase A	NA	M1NSB9	Streptococcus_phage	29.9	5.2e-09
>prophage 68
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	950826	952662	6226215		Tupanvirus(100.0%)	1	NA	NA
WP_059269322.1|950826_952662_-	ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	28.3	7.3e-47
>prophage 69
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	972553	973537	6226215		Xanthomonas_phage(100.0%)	1	NA	NA
WP_049071396.1|972553_973537_+	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	47.3	6.0e-24
>prophage 70
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	989962	991663	6226215		Staphylococcus_phage(100.0%)	1	NA	NA
WP_059269331.1|989962_991663_+	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	26.9	7.2e-33
>prophage 71
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	997255	998344	6226215		Cedratvirus(100.0%)	1	NA	NA
WP_049071432.1|997255_998344_+	methionine ABC transporter ATP-binding protein	NA	A0A285PWH2	Cedratvirus	27.2	7.7e-12
>prophage 72
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1012940	1014536	6226215		Bacillus_phage(100.0%)	1	NA	NA
WP_059269339.1|1012940_1014536_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	37.9	1.4e-17
>prophage 73
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1030341	1031484	6226215		Streptococcus_phage(100.0%)	1	NA	NA
WP_059272905.1|1030341_1031484_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	38.4	1.7e-41
>prophage 74
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1036861	1037395	6226215		Synechococcus_phage(100.0%)	1	NA	NA
WP_049071488.1|1036861_1037395_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	36.2	1.3e-12
>prophage 75
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1060016	1061537	6226215		Hepacivirus(100.0%)	1	NA	NA
WP_059269358.1|1060016_1061537_-	acyl--CoA ligase	NA	Q75ZG1	Hepacivirus	24.5	3.4e-26
>prophage 76
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1071966	1079657	6226215	tRNA	Roseobacter_phage(33.33%)	7	NA	NA
WP_049071540.1|1071966_1073352_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B0V011	Roseobacter_phage	34.8	5.5e-23
WP_049071542.1|1073352_1074051_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_049071543.1|1074047_1074749_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_049071544.1|1075065_1076115_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.9	1.1e-68
WP_059269366.1|1076175_1076670_-	hypothetical protein	NA	NA	NA	NA	NA
WP_059269367.1|1076750_1077707_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_059269368.1|1077710_1079657_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	31.8	1.1e-74
>prophage 77
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1083194	1084574	6226215		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_049071551.1|1083194_1084574_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	2.2e-16
>prophage 78
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1104649	1107794	6226215		Dickeya_phage(50.0%)	2	NA	NA
WP_059269380.1|1104649_1105834_+	efflux RND transporter periplasmic adaptor subunit	NA	A0A140XAI1	Dickeya_phage	51.0	1.9e-16
WP_059269381.1|1105835_1107794_+	MacB family efflux pump subunit	NA	G9BWD6	Planktothrix_phage	41.0	1.2e-36
>prophage 79
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1114550	1115255	6226215		Planktothrix_phage(100.0%)	1	NA	NA
WP_053501048.1|1114550_1115255_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.4	8.1e-31
>prophage 80
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1119253	1120090	6226215	tRNA	Pandoravirus(100.0%)	1	NA	NA
WP_049071580.1|1119253_1120090_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	A0A291ATS8	Pandoravirus	31.8	2.7e-17
>prophage 81
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1124195	1131100	6226215		Pandoravirus(50.0%)	2	NA	NA
WP_059269389.1|1124195_1125332_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	42.1	6.9e-40
WP_059269390.1|1125340_1131100_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.9	4.4e-199
>prophage 82
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1136881	1139418	6226215		Staphylococcus_phage(50.0%)	2	NA	NA
WP_049071591.1|1136881_1137625_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	22.5	6.0e-08
WP_054416488.1|1137624_1139418_-	branched-chain amino acid ABC transporter ATP-binding protein/permease	NA	A0A285PWH2	Cedratvirus	27.8	3.3e-12
>prophage 83
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1145913	1147545	6226215		Staphylococcus_phage(100.0%)	1	NA	NA
WP_059269398.1|1145913_1147545_-	AMP-binding protein	NA	A0A2H4PQM9	Staphylococcus_phage	24.9	5.9e-16
>prophage 84
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1158961	1166534	6226215		Cedratvirus(25.0%)	7	NA	NA
WP_059269401.1|1158961_1159942_+	ABC transporter ATP-binding protein	NA	A0A2R8FFL6	Cedratvirus	26.3	8.4e-10
WP_059269402.1|1159938_1160934_+	dipeptide ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.0	4.7e-16
WP_059269403.1|1161424_1161943_-	hypothetical protein	NA	NA	NA	NA	NA
WP_059269404.1|1162042_1162852_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_080977321.1|1162951_1163878_+	DMT family transporter	NA	NA	NA	NA	NA
WP_059269405.1|1163891_1164710_-	AAC(3) family N-acetyltransferase	NA	O64018	Bacillus_phage	45.2	1.1e-47
WP_006388972.1|1164860_1166534_+	energy-dependent translational throttle protein EttA	NA	A0A2K9L3Z8	Tupanvirus	27.4	2.7e-40
>prophage 85
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1175140	1186420	6226215	tRNA	Bacillus_phage(50.0%)	8	NA	NA
WP_049071630.1|1175140_1176907_-|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	54.6	2.0e-163
WP_059269408.1|1177043_1178387_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_049071633.1|1178383_1179439_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_049071635.1|1179541_1181371_-	DNA helicase RecQ	NA	A0A1V0SBK0	Catovirus	33.5	2.5e-76
WP_059269409.1|1181465_1182773_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006388986.1|1182995_1183697_+	response regulator	NA	W8CYM9	Bacillus_phage	36.2	2.1e-31
WP_049071639.1|1183696_1185250_+	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_049071640.1|1185346_1186420_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	8.6e-08
>prophage 86
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1189828	1191418	6226215		Prochlorococcus_phage(100.0%)	1	NA	NA
WP_049071647.1|1189828_1191418_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	46.1	1.6e-63
>prophage 87
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1198598	1204506	6226215		Paramecium_bursaria_Chlorella_virus(50.0%)	4	NA	NA
WP_059269413.1|1198598_1201406_+	magnesium-translocating P-type ATPase	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	24.1	5.7e-35
WP_059269414.1|1201464_1202571_+	porin	NA	NA	NA	NA	NA
WP_156430286.1|1202670_1203546_+	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_049071659.1|1203660_1204506_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.6	2.1e-65
>prophage 88
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1216010	1217459	6226215		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
WP_104010450.1|1216010_1217459_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.6	2.2e-51
>prophage 89
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1244086	1253077	6226215		Chrysochromulina_ericina_virus(25.0%)	7	NA	NA
WP_049071730.1|1244086_1246012_+	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	50.3	1.9e-146
WP_059269426.1|1246121_1247252_+	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	27.9	4.1e-24
WP_049071739.1|1247612_1248002_-	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_059269427.1|1248288_1251042_-	insulinase family protein	NA	A0A2L2DIR8	Acanthamoeba_polyphaga_mimivirus	28.3	1.1e-19
WP_054501734.1|1251153_1251753_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_049071745.1|1252046_1252427_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059269428.1|1252519_1253077_+	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	36.0	1.9e-14
>prophage 90
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1256803	1258060	6226215		Phage_21(100.0%)	1	NA	NA
WP_049071757.1|1256803_1258060_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	5.2e-12
>prophage 91
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1267417	1269577	6226215		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_059269434.1|1267417_1269577_-	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	23.1	2.0e-24
>prophage 92
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1275655	1279036	6226215		Orpheovirus(50.0%)	2	NA	NA
WP_054501713.1|1275655_1276615_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	41.5	1.1e-59
WP_104010435.1|1276657_1279036_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	47.7	3.4e-81
>prophage 93
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1283029	1285035	6226215		Acanthocystis_turfacea_Chlorella_virus(50.0%)	2	NA	NA
WP_049071793.1|1283029_1284031_-	ABC transporter ATP-binding protein	NA	M1IB70	Acanthocystis_turfacea_Chlorella_virus	27.2	3.1e-07
WP_059269438.1|1284027_1285035_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.8	3.9e-10
>prophage 94
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1291176	1299722	6226215	tRNA	Bacillus_virus(25.0%)	9	NA	NA
WP_054417538.1|1291176_1292517_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.4	1.3e-77
WP_049071801.1|1292559_1293906_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.1	1.4e-84
WP_080977324.1|1294204_1294453_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049071802.1|1294700_1295036_-	virulence factor	NA	NA	NA	NA	NA
WP_059269441.1|1295375_1295879_-	ASCH domain-containing protein	NA	O03965	Myxococcus_phage	28.0	4.3e-10
WP_049071804.1|1296071_1296272_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059269442.1|1296319_1297519_+	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_059269443.1|1297560_1298436_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_059272915.1|1298594_1299722_+	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	27.5	4.5e-31
>prophage 95
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1307900	1309616	6226215		Ostreococcus_lucimarinus_virus(100.0%)	1	NA	NA
WP_049071827.1|1307900_1309616_+	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	29.8	6.5e-58
>prophage 96
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1333514	1334441	6226215		Klosneuvirus(100.0%)	1	NA	NA
WP_054417557.1|1333514_1334441_+	hydroxymethylglutaryl-CoA lyase	NA	A0A1V0SKU2	Klosneuvirus	30.1	5.1e-25
>prophage 97
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1369218	1383576	6226215		Bacillus_phage(50.0%)	14	NA	NA
WP_156430290.1|1369218_1370625_-	sensor histidine kinase N-terminal domain-containing protein	NA	W8CYF6	Bacillus_phage	24.4	6.2e-14
WP_059269479.1|1370629_1371328_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	33.3	7.8e-26
WP_082707126.1|1371443_1375502_-	autotransporter domain-containing protein	NA	A0A217EQY2	Bacillus_phage	25.0	1.4e-05
WP_059269481.1|1375791_1377132_+	CitMHS family transporter	NA	NA	NA	NA	NA
WP_059269482.1|1377173_1377914_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_059269483.1|1377966_1378731_-	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	28.7	6.8e-15
WP_059269484.1|1378898_1379258_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059269485.1|1379274_1379730_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049071966.1|1380170_1380374_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	60.6	2.6e-14
WP_049071968.1|1380421_1380679_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049071971.1|1380852_1381206_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_059272923.1|1381274_1381583_-	DUF1272 domain-containing protein	NA	NA	NA	NA	NA
WP_059269486.1|1381749_1382661_+	DUF808 domain-containing protein	NA	NA	NA	NA	NA
WP_054417576.1|1382691_1383576_-	putative beta-lactamase transcriptional repressor AxcR	NA	Q6JIH3	Burkholderia_virus	28.8	6.0e-15
>prophage 98
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1390777	1392433	6226215		Planktothrix_phage(100.0%)	1	NA	NA
WP_054417579.1|1390777_1392433_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.7	7.3e-22
>prophage 99
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1405348	1411820	6226215	holin	Vibrio_phage(50.0%)	3	NA	NA
WP_059269494.1|1405348_1407319_+|holin	choline BCCT transporter BetT	holin	A0A2I7QNT1	Vibrio_phage	28.8	1.3e-25
WP_059269495.1|1407553_1408684_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_059269496.1|1408700_1411820_+	MexW/MexI family multidrug efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	22.4	2.8e-59
>prophage 100
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1415446	1419766	6226215		Leptospira_phage(100.0%)	2	NA	NA
WP_059269499.1|1415446_1418584_-	multidrug efflux RND transporter permease subunit AxyY	NA	S5VTK5	Leptospira_phage	21.4	1.3e-48
WP_059269500.1|1418590_1419766_-	MexX/AxyX family multidrug efflux RND transporter periplasmic adaptor subunit	NA	S5VL44	Leptospira_phage	23.9	4.7e-07
>prophage 101
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1459536	1462655	6226215	tRNA	Bacillus_phage(100.0%)	3	NA	NA
WP_003813882.1|1459536_1460271_-	two-component system response regulator OmpR	NA	W8CYM9	Bacillus_phage	36.3	1.3e-34
WP_059269512.1|1460424_1461693_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
WP_174539035.1|1461689_1462655_+	uracil-DNA glycosylase	NA	A0A127AW33	Bacillus_phage	38.0	6.3e-18
>prophage 102
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1468991	1474100	6226215		Ralstonia_phage(50.0%)	6	NA	NA
WP_059269515.1|1468991_1471091_+	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	44.5	4.7e-143
WP_006389239.1|1471263_1472040_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_054419473.1|1472057_1472327_-	BolA family transcriptional regulator	NA	NA	NA	NA	NA
WP_049072089.1|1472408_1472975_-	septation protein A	NA	NA	NA	NA	NA
WP_054419447.1|1472971_1473370_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_059269517.1|1473422_1474100_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.6	1.2e-10
>prophage 103
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1477886	1480486	6226215		Brazilian_cedratvirus(50.0%)	2	NA	NA
WP_059269518.1|1477886_1479725_+	branched-chain amino acid ABC transporter ATP-binding protein/permease	NA	A0A2R8FG22	Brazilian_cedratvirus	29.0	6.2e-14
WP_006389249.1|1479721_1480486_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	25.9	2.5e-09
>prophage 104
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1488420	1489901	6226215		Tupanvirus(50.0%)	2	NA	NA
WP_006389258.1|1488420_1489131_-	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	25.9	4.5e-05
WP_049072117.1|1489127_1489901_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.3	1.4e-12
>prophage 105
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1494391	1495567	6226215		Agrobacterium_phage(100.0%)	1	NA	NA
WP_049072128.1|1494391_1495567_+	nicotinate phosphoribosyltransferase	NA	A0A2L0UZQ6	Agrobacterium_phage	33.7	3.1e-51
>prophage 106
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1500036	1501350	6226215		Burkholderia_virus(100.0%)	1	NA	NA
WP_080977337.1|1500036_1501350_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	39.4	1.6e-80
>prophage 107
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1520061	1530596	6226215	protease	Trichoplusia_ni_ascovirus(16.67%)	11	NA	NA
WP_049072164.1|1520061_1520814_+	3-oxoacyl-ACP reductase FabG	NA	Q06VL0	Trichoplusia_ni_ascovirus	32.4	9.3e-17
WP_005012191.1|1521027_1521267_+	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	48.5	1.6e-10
WP_020924694.1|1521456_1522686_+	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA	NA
WP_167352808.1|1522723_1523182_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006389292.1|1523178_1523778_+	RNA polymerase sigma factor RpoE	NA	A0A0F6TH34	Sinorhizobium_phage	27.2	1.3e-05
WP_049072167.1|1523790_1524300_+	sigma-E factor negative regulatory protein	NA	NA	NA	NA	NA
WP_059269533.1|1524299_1525376_+	MucB/RseB C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_049072170.1|1525416_1526910_+|protease	DegQ family serine endoprotease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	29.5	2.0e-23
WP_049072171.1|1527131_1528925_+	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	23.9	3.5e-22
WP_059269534.1|1528947_1529832_+	signal peptidase I	NA	NA	NA	NA	NA
WP_049072173.1|1529834_1530596_+	ribonuclease III	NA	M4QNJ2	Ostreococcus_lucimarinus_virus	35.4	2.0e-19
>prophage 108
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1540484	1541990	6226215		Mycoplasma_phage(100.0%)	1	NA	NA
WP_059269540.1|1540484_1541990_-	leucyl aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	38.8	8.6e-54
>prophage 109
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1548964	1555814	6226215		Staphylococcus_phage(66.67%)	5	NA	NA
WP_049072205.1|1548964_1549624_-	C40 family peptidase	NA	A0A217EQL1	Bacillus_phage	37.9	5.6e-18
WP_059269541.1|1549938_1551828_+	propionate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	31.7	1.2e-60
WP_049072207.1|1551824_1552232_+	heme-binding protein	NA	NA	NA	NA	NA
WP_059269542.1|1552228_1553569_+	MFS transporter	NA	NA	NA	NA	NA
WP_049072210.1|1553834_1555814_+	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	44.8	1.8e-83
>prophage 110
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1566922	1568809	6226215		Mycoplasma_phage(100.0%)	1	NA	NA
WP_059269548.1|1566922_1568809_+	dipeptide ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	36.1	1.3e-06
>prophage 111
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1574547	1586579	6226215		Acinetobacter_phage(20.0%)	11	NA	NA
WP_059269552.1|1574547_1576338_+	aminopeptidase P family protein	NA	A0A0P0I8D7	Acinetobacter_phage	51.4	3.0e-170
WP_059269553.1|1576422_1577430_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006389343.1|1577625_1579278_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	53.1	1.5e-155
WP_006389344.1|1579505_1579790_+	DUF1330 domain-containing protein	NA	NA	NA	NA	NA
WP_059269554.1|1579794_1581081_+	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	63.4	1.8e-148
WP_049072235.1|1581145_1581577_+	cell division protein FtsB	NA	NA	NA	NA	NA
WP_059269555.1|1581570_1582251_-	hypothetical protein	NA	NA	NA	NA	NA
WP_059269556.1|1582324_1583254_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
WP_059269557.1|1583341_1583863_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA	NA
WP_059269558.1|1583910_1585578_-	AMP-binding protein	NA	A0A1V0SBX8	Catovirus	20.8	4.2e-09
WP_100503962.1|1585706_1586579_-	UDP-2,3-diacylglucosamine diphosphatase	NA	A0A218MKA7	uncultured_virus	46.4	1.0e-62
>prophage 112
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1597745	1601229	6226215		Streptomyces_phage(50.0%)	4	NA	NA
WP_059269562.1|1597745_1598525_+	GntR family transcriptional regulator	NA	A0A2H5BLU5	Streptomyces_phage	38.1	6.5e-05
WP_006389362.1|1598646_1599063_+	succinate dehydrogenase, cytochrome b556 subunit	NA	NA	NA	NA	NA
WP_049072252.1|1599063_1599447_+	succinate dehydrogenase, hydrophobic membrane anchor protein	NA	NA	NA	NA	NA
WP_049072253.1|1599450_1601229_+	succinate dehydrogenase flavoprotein subunit	NA	A0A2P0ZL82	Lactobacillus_phage	24.6	1.3e-05
>prophage 113
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1623544	1624972	6226215		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_049072272.1|1623544_1624972_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.7	1.7e-43
>prophage 114
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1638452	1640534	6226215		Bacillus_phage(100.0%)	1	NA	NA
WP_059269578.1|1638452_1640534_+	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	29.3	1.4e-75
>prophage 115
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1651890	1661955	6226215		Moraxella_phage(100.0%)	1	NA	NA
WP_082707133.1|1651890_1661955_+	hemagglutinin repeat-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.6	1.6e-31
>prophage 116
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1672999	1675285	6226215		Bacillus_phage(100.0%)	1	NA	NA
WP_049072298.1|1672999_1675285_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	31.7	1.6e-56
>prophage 117
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1683139	1686483	6226215		Tupanvirus(50.0%)	3	NA	NA
WP_059269588.1|1683139_1684615_-	AMP-binding protein	NA	A0A2K9KZV5	Tupanvirus	27.9	1.5e-26
WP_049072309.1|1684637_1684877_-	acyl carrier protein	NA	NA	NA	NA	NA
WP_049072311.1|1684902_1686483_-	MBOAT family protein	NA	A0A125RNP0	Pseudomonas_phage	41.5	8.3e-84
>prophage 118
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1695325	1696486	6226215		Catovirus(100.0%)	1	NA	NA
WP_054518930.1|1695325_1696486_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	26.4	3.2e-24
>prophage 119
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1702593	1708588	6226215		Bacillus_virus(33.33%)	4	NA	NA
WP_049072335.1|1702593_1705251_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	32.9	1.2e-103
WP_059269594.1|1705250_1706381_+	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	43.6	8.3e-78
WP_054416843.1|1706373_1707459_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_059269595.1|1707466_1708588_+	histidinol-phosphate transaminase	NA	A0A0H3TLT9	Faustovirus	24.6	1.1e-13
>prophage 120
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1715679	1719322	6226215		Synechococcus_phage(66.67%)	4	NA	NA
WP_053085994.1|1715679_1716621_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	M4QF80	Synechococcus_phage	29.4	2.1e-13
WP_059269597.1|1716617_1717607_+	ADP-glyceromanno-heptose 6-epimerase	NA	E3SJ87	Synechococcus_phage	32.7	8.2e-29
WP_082707135.1|1717797_1718316_+	DUF655 domain-containing protein	NA	NA	NA	NA	NA
WP_049077573.1|1718410_1719322_+	cysteine synthase CysM	NA	A0A1X9I5F1	Streptococcus_phage	42.3	4.4e-53
>prophage 121
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1723646	1724570	6226215		Tupanvirus(100.0%)	1	NA	NA
WP_080977347.1|1723646_1724570_+	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	35.4	5.4e-43
>prophage 122
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1737745	1741847	6226215		Bacillus_virus(50.0%)	4	NA	NA
WP_059269602.1|1737745_1738810_+	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.2	1.3e-27
WP_059269603.1|1738806_1739556_+	phosphoadenylyl-sulfate reductase	NA	NA	NA	NA	NA
WP_059269604.1|1739596_1740505_+	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_059269605.1|1740548_1741847_+	sulfate adenylyltransferase	NA	A0A1V0SGC3	Hokovirus	30.7	6.3e-37
>prophage 123
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1748882	1749428	6226215		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
WP_049072382.1|1748882_1749428_+	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	39.0	5.5e-27
>prophage 124
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1753965	1755054	6226215		Synechococcus_phage(100.0%)	1	NA	NA
WP_059269612.1|1753965_1755054_+	phenylacetate-CoA oxygenase/reductase subunit PaaK	NA	V5UTY8	Synechococcus_phage	48.4	1.3e-11
>prophage 125
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1768001	1770858	6226215	protease	uncultured_Mediterranean_phage(50.0%)	2	NA	NA
WP_059269616.1|1768001_1769459_-|protease	DegQ family serine endoprotease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	30.5	6.2e-25
WP_059269617.1|1769523_1770858_-	sensor histidine kinase N-terminal domain-containing protein	NA	A0A1B0VMK3	Pseudomonas_phage	25.6	1.5e-09
>prophage 126
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1776753	1777956	6226215		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_059269619.1|1776753_1777956_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	28.2	2.7e-18
>prophage 127
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1782224	1785278	6226215		Bodo_saltans_virus(100.0%)	1	NA	NA
WP_059269621.1|1782224_1785278_+	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	25.2	3.4e-25
>prophage 128
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1793504	1796937	6226215		Synechococcus_phage(50.0%)	2	NA	NA
WP_026383125.1|1793504_1794131_-	TIGR00730 family Rossman fold protein	NA	A0A1D8KU27	Synechococcus_phage	36.1	5.0e-16
WP_059269625.1|1794219_1796937_+	DNA polymerase I	NA	A0A218MKQ4	uncultured_virus	30.8	4.5e-69
>prophage 129
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1805783	1808561	6226215		Tupanvirus(50.0%)	3	NA	NA
WP_059269629.1|1805783_1806353_-	HD domain-containing protein	NA	A0A2K9L141	Tupanvirus	32.9	2.3e-20
WP_006388352.1|1806406_1807270_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_049072431.1|1807430_1808561_+	putative 2-aminoethylphosphonate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.8	5.9e-31
>prophage 130
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1815126	1816137	6226215		Escherichia_coli_O157_typing_phage(100.0%)	1	NA	NA
WP_049072436.1|1815126_1816137_-	acyltransferase family protein	NA	A0A0F6TJ51	Escherichia_coli_O157_typing_phage	24.5	8.1e-16
>prophage 131
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1826261	1827644	6226215		Burkholderia_phage(100.0%)	1	NA	NA
WP_006388372.1|1826261_1827644_+	replicative DNA helicase	NA	C7BGG1	Burkholderia_phage	59.5	2.7e-139
>prophage 132
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1839139	1849307	6226215		Bacillus_phage(60.0%)	8	NA	NA
WP_049072460.1|1839139_1840432_+	aspartate carbamoyltransferase	NA	Q84489	Paramecium_bursaria_Chlorella_virus	36.0	6.5e-42
WP_049072462.1|1840564_1841977_+	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	40.0	1.5e-20
WP_020924508.1|1842118_1843018_-	recombination-associated protein RdgC	NA	B5AX95	Iodobacteriophage	32.8	1.7e-36
WP_006388393.1|1843169_1843379_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100504276.1|1843763_1845440_-	MHS family MFS transporter	NA	NA	NA	NA	NA
WP_100507387.1|1845680_1847057_-	sensor histidine kinase	NA	W8CYF6	Bacillus_phage	28.4	2.5e-20
WP_006393745.1|1847172_1847862_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_054417614.1|1848242_1849307_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	63.4	3.7e-112
>prophage 133
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1853767	1862332	6226215		Tupanvirus(50.0%)	6	NA	NA
WP_059269644.1|1853767_1857739_+	non-ribosomal peptide synthetase	NA	A0A2K9KZV5	Tupanvirus	31.1	2.5e-60
WP_049072472.1|1857881_1858484_+	DUF2889 domain-containing protein	NA	NA	NA	NA	NA
WP_006388409.1|1858494_1859655_+	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA	NA
WP_006388410.1|1859680_1860562_+	succinate--CoA ligase subunit alpha	NA	A0A2K9L1S3	Tupanvirus	31.6	1.1e-19
WP_049072473.1|1860809_1861508_+	TerC family protein	NA	W8EBD0	Pseudomonas_phage	30.8	1.9e-16
WP_049072474.1|1861612_1862332_+	TerC family protein	NA	W8EBD0	Pseudomonas_phage	49.5	2.2e-39
>prophage 134
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1867091	1867622	6226215		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_049072482.1|1867091_1867622_+	inorganic diphosphatase	NA	A0A2H4J8U1	uncultured_Caudovirales_phage	56.6	1.4e-51
>prophage 135
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1872692	1873385	6226215		Staphylococcus_phage(100.0%)	1	NA	NA
WP_049072489.1|1872692_1873385_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	25.3	2.2e-12
>prophage 136
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1876674	1878381	6226215		Cronobacter_phage(100.0%)	1	NA	NA
WP_054417624.1|1876674_1878381_-	PhoH family protein	NA	K4F5S4	Cronobacter_phage	35.6	1.9e-70
>prophage 137
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1884343	1888079	6226215		Klosneuvirus(50.0%)	2	NA	NA
WP_054417627.1|1884343_1885363_-	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	35.5	5.6e-49
WP_059269650.1|1885373_1888079_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	25.5	1.8e-17
>prophage 138
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1891858	1892932	6226215		Klebsiella_phage(100.0%)	1	NA	NA
WP_049072502.1|1891858_1892932_+	3-deoxy-7-phosphoheptulonate synthase AroG	NA	A0A2I6UFP9	Klebsiella_phage	47.0	7.9e-78
>prophage 139
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1903850	1909057	6226215	tRNA	Burkholderia_virus(50.0%)	5	NA	NA
WP_049072512.1|1903850_1904771_+	transcriptional regulator GcvA	NA	Q6JIH3	Burkholderia_virus	31.8	1.8e-30
WP_059269656.1|1904783_1905902_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_049072514.1|1906026_1906845_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_049072515.1|1906907_1907519_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_049072517.1|1907680_1909057_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	47.7	4.5e-110
>prophage 140
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1919515	1933523	6226215	integrase	Burkholderia_phage(42.86%)	18	1920275:1920290	1936568:1936583
WP_049072533.1|1919515_1920109_+	hypothetical protein	NA	A9YX29	Burkholderia_phage	47.2	2.6e-46
WP_059269662.1|1920119_1921595_+	DUF3383 domain-containing protein	NA	A0A0P0I492	Acinetobacter_phage	48.5	6.1e-113
1920275:1920290	attL	CGCCGTCGCCGCCGAC	NA	NA	NA	NA
WP_006388470.1|1921608_1922049_+	DUF3277 family protein	NA	A0A0P0IKY2	Acinetobacter_phage	54.1	3.1e-36
WP_059269663.1|1922052_1922502_+	hypothetical protein	NA	A0A0N7IRF3	Acinetobacter_phage	36.5	2.3e-18
WP_006393814.1|1922528_1922687_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059269664.1|1922679_1924356_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059269665.1|1924348_1924948_+	hypothetical protein	NA	A0A0M3ULD5	Salmonella_phage	34.3	4.2e-20
WP_049072539.1|1924957_1925257_+	hypothetical protein	NA	A0A2H4J495	uncultured_Caudovirales_phage	44.0	4.1e-16
WP_059272939.1|1925276_1926287_+	hypothetical protein	NA	A9YX04	Burkholderia_phage	51.6	9.7e-78
WP_059269666.1|1926321_1927065_+	hypothetical protein	NA	A9YX06	Burkholderia_phage	63.9	1.3e-84
WP_054417648.1|1927073_1927427_+	hypothetical protein	NA	A9YX11	Burkholderia_phage	65.0	1.3e-34
WP_049072544.1|1927423_1928605_+	bacteriophage protein	NA	A9YX12	Burkholderia_phage	63.4	3.1e-131
WP_059269667.1|1928606_1929272_+	DUF2612 domain-containing protein	NA	A9YX13	Burkholderia_phage	59.3	1.1e-72
WP_156430295.1|1929286_1930078_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059269669.1|1930977_1931328_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049072549.1|1931331_1932354_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4JE37	uncultured_Caudovirales_phage	32.0	8.2e-24
WP_049072550.1|1932541_1933003_+	hypothetical protein	NA	A0A0U5LBV3	unidentified_phage	36.5	1.3e-13
WP_059269670.1|1932992_1933523_+	hypothetical protein	NA	A0A2H4JFP9	uncultured_Caudovirales_phage	56.8	2.9e-41
1936568:1936583	attR	GTCGGCGGCGACGGCG	NA	NA	NA	NA
>prophage 141
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1951956	1958033	6226215		Lactococcus_phage(33.33%)	5	NA	NA
WP_049072580.1|1951956_1954422_+	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	31.2	9.7e-63
WP_049072581.1|1954634_1955372_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_059269680.1|1955422_1956667_+	cystathionine gamma-synthase family protein	NA	NA	NA	NA	NA
WP_059269681.1|1956719_1957400_+	Fe2+-dependent dioxygenase	NA	Q5GQB0	Synechococcus_phage	29.1	5.8e-18
WP_003812968.1|1957760_1958033_+	HU family DNA-binding protein	NA	B5TA87	Burkholderia_phage	57.8	1.1e-20
>prophage 142
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1962189	1968179	6226215		Bacillus_phage(33.33%)	3	NA	NA
WP_049072587.1|1962189_1963215_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	27.9	4.5e-14
WP_049072589.1|1963211_1965140_+	potassium transporter Kup	NA	A7K9V6	Acanthocystis_turfacea_chlorella_virus	32.2	1.2e-71
WP_006388517.1|1966838_1968179_-	argininosuccinate synthase	NA	A0A140XAJ5	Dickeya_phage	80.2	1.5e-54
>prophage 143
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1974338	1975025	6226215		Bacillus_phage(100.0%)	1	NA	NA
WP_054419799.1|1974338_1975025_+	heavy metal response regulator transcription factor	NA	W8CYM9	Bacillus_phage	33.6	6.1e-31
>prophage 144
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1981407	1983587	6226215		Paramecium_bursaria_Chlorella_virus(50.0%)	2	NA	NA
WP_026382721.1|1981407_1982349_-	ornithine carbamoyltransferase	NA	M1HWF9	Paramecium_bursaria_Chlorella_virus	24.9	5.2e-17
WP_059269687.1|1982405_1983587_-	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	28.8	2.1e-23
>prophage 145
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	1992229	1994210	6226215		Planktothrix_phage(50.0%)	2	NA	NA
WP_049072612.1|1992229_1993237_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.8	2.2e-21
WP_059269692.1|1993226_1994210_+	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	32.9	1.9e-14
>prophage 146
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2003075	2004203	6226215		Mycoplasma_phage(100.0%)	1	NA	NA
WP_049072627.1|2003075_2004203_+	polyamine ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	36.0	9.0e-24
>prophage 147
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2018332	2032758	6226215		Catovirus(20.0%)	8	NA	NA
WP_082707139.1|2018332_2022271_+	ATP-dependent RNA helicase HrpA	NA	A0A1V0SBU4	Catovirus	28.7	9.1e-47
WP_049072642.1|2022440_2024174_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_049072643.1|2024182_2025478_+	AAA-associated domain-containing protein	NA	G3M9Y6	Bacillus_virus	36.3	2.3e-31
WP_049072645.1|2025549_2026449_-	lipid A hydroxylase LpxO	NA	S4VR59	Pandoravirus	36.8	1.4e-35
WP_059269703.1|2026578_2030070_+	DNA polymerase III subunit alpha	NA	A0A0K1Y906	Streptomyces_phage	37.6	1.9e-184
WP_059269704.1|2030069_2031161_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_059269705.1|2031157_2032006_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_059269706.1|2032002_2032758_+	glycosyltransferase family 2 protein	NA	S5WBE2	Pseudomonas_phage	37.1	3.2e-09
>prophage 148
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2037955	2043163	6226215		Bacillus_phage(50.0%)	4	NA	NA
WP_049072658.1|2037955_2039731_+	lipid A export permease/ATP-binding protein MsbA	NA	W8CYL7	Bacillus_phage	28.0	6.8e-50
WP_059269709.1|2039779_2041597_+	cation:proton antiporter	NA	NA	NA	NA	NA
WP_059269710.1|2041742_2041970_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059269711.1|2042017_2043163_-	sensor domain-containing diguanylate cyclase	NA	G3MA91	Bacillus_virus	37.7	2.6e-18
>prophage 149
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2064755	2066279	6226215		Klebsiella_phage(100.0%)	1	NA	NA
WP_059269715.1|2064755_2066279_+	DUF853 domain-containing protein	NA	A0A248XCZ8	Klebsiella_phage	46.4	1.7e-81
>prophage 150
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2093099	2098682	6226215		Bacillus_virus(66.67%)	4	NA	NA
WP_006387817.1|2093099_2093426_-	thioredoxin TrxA	NA	A0A1J0GW78	Streptomyces_phage	46.2	3.6e-18
WP_049075245.1|2093752_2095714_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	35.9	3.8e-94
WP_059269725.1|2095713_2096322_+	YcxB family protein	NA	NA	NA	NA	NA
WP_059269726.1|2096360_2098682_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.9	1.9e-76
>prophage 151
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2113887	2116512	6226215	tRNA	Klosneuvirus(100.0%)	1	NA	NA
WP_059269733.1|2113887_2116512_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.6	6.9e-83
>prophage 152
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2122299	2128162	6226215	tRNA	Planktothrix_phage(33.33%)	4	NA	NA
WP_049075199.1|2122299_2123031_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.2	2.5e-30
WP_059269737.1|2123040_2124330_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_054417794.1|2124430_2127325_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.7	6.1e-141
WP_006387851.1|2127736_2128162_+	nucleoside-diphosphate kinase	NA	A0A167REB2	Powai_lake_megavirus	43.6	8.4e-23
>prophage 153
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2135687	2136755	6226215		Pacmanvirus(100.0%)	1	NA	NA
WP_054417792.1|2135687_2136755_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.3	9.2e-18
>prophage 154
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2142038	2149871	6226215		Pandoravirus(33.33%)	5	NA	NA
WP_049075168.1|2142038_2143334_+	adenylosuccinate synthase	NA	A0A0B5J049	Pandoravirus	31.4	8.4e-58
WP_006387865.1|2143416_2143959_+	phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_006218592.1|2144443_2144656_+	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_059269739.1|2144675_2146739_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	43.2	1.2e-66
WP_049075163.1|2147603_2149871_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	4.2e-36
>prophage 155
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2154859	2156041	6226215		Salmonella_virus(100.0%)	1	NA	NA
WP_059269743.1|2154859_2156041_-	acyltransferase	NA	A0A1R3Y5Q6	Salmonella_virus	33.3	3.5e-10
>prophage 156
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2160304	2161672	6226215		Vibrio_phage(100.0%)	1	NA	NA
WP_059269747.1|2160304_2161672_+	pilus assembly protein N-terminal domain-containing protein	NA	R9TEZ5	Vibrio_phage	29.3	1.2e-09
>prophage 157
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2170690	2172178	6226215		Microcystis_phage(100.0%)	1	NA	NA
WP_059269751.1|2170690_2172178_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	35.3	8.8e-51
>prophage 158
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2178525	2179593	6226215		Pandoravirus(100.0%)	1	NA	NA
WP_049075116.1|2178525_2179593_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	44.3	9.9e-81
>prophage 159
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2195482	2197648	6226215		Organic_Lake_phycodnavirus(100.0%)	1	NA	NA
WP_049075098.1|2195482_2197648_-	type I secretion system permease/ATPase	NA	F2Y2R6	Organic_Lake_phycodnavirus	34.2	1.0e-23
>prophage 160
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2211428	2211962	6226215		Tupanvirus(100.0%)	1	NA	NA
WP_049075079.1|2211428_2211962_-	HD domain-containing protein	NA	A0A2K9L4U0	Tupanvirus	41.8	1.9e-24
>prophage 161
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2221032	2224200	6226215		Tupanvirus(50.0%)	3	NA	NA
WP_059269770.1|2221032_2222091_-	histone deacetylase family protein	NA	A0A2K9L0J7	Tupanvirus	36.3	1.9e-44
WP_059269771.1|2222195_2222516_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_059269772.1|2222565_2224200_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	25.8	5.5e-14
>prophage 162
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2230691	2232407	6226215		Micromonas_pusilla_virus(100.0%)	1	NA	NA
WP_059269775.1|2230691_2232407_-	thiamine pyrophosphate-binding protein	NA	G8DDL3	Micromonas_pusilla_virus	25.4	4.1e-36
>prophage 163
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2238098	2247083	6226215	tRNA	Enterobacteria_phage(20.0%)	8	NA	NA
WP_059269777.1|2238098_2239013_+	dTDP-4-dehydrorhamnose reductase	NA	I7HXC9	Enterobacteria_phage	35.4	4.6e-26
WP_049075048.1|2239339_2241292_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.6	1.1e-125
WP_076410237.1|2241312_2241864_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	29.6	3.0e-12
WP_059269778.1|2242028_2243009_+	glutathione synthase	NA	NA	NA	NA	NA
WP_049075042.1|2243026_2243428_+	PTS mannose transporter subunit IIA	NA	NA	NA	NA	NA
WP_006387993.1|2243538_2243808_+	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
WP_139122126.1|2243932_2245627_+	phosphoenolpyruvate--protein phosphotransferase	NA	A0A1V0SGR7	Hokovirus	25.7	3.7e-05
WP_049075040.1|2245844_2247083_-	ammonium transporter	NA	H8ZJB2	Ostreococcus_tauri_virus	26.2	3.3e-19
>prophage 164
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2251564	2267565	6226215	tRNA,integrase	Burkholderia_phage(22.22%)	20	2253504:2253518	2260354:2260368
WP_049075035.1|2251564_2252587_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.3	1.3e-26
WP_059269781.1|2252601_2255019_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
2253504:2253518	attL	CGGCGTGGTGGTGGC	NA	NA	NA	NA
WP_080977459.1|2255022_2255361_+	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	42.2	3.7e-13
WP_049075028.1|2255418_2255850_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_059269782.1|2256262_2257444_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A059VF45	Pseudomonas_phage	60.8	6.6e-126
WP_156430296.1|2257950_2258205_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059269783.1|2258231_2259026_-	ParB/RepB/Spo0J family partition protein	NA	C7BGF1	Burkholderia_phage	60.7	4.1e-79
WP_059269784.1|2259063_2259429_-	hypothetical protein	NA	NA	NA	NA	NA
WP_059269785.1|2259522_2260545_-	recombinase RecT	NA	Q858E1	Salmonella_phage	50.8	7.8e-59
2260354:2260368	attR	CGGCGTGGTGGTGGC	NA	NA	NA	NA
WP_059269786.1|2260541_2261519_-	YqaJ viral recombinase family protein	NA	Q858E0	Salmonella_phage	37.1	8.0e-61
WP_059269787.1|2261521_2261719_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156430297.1|2261813_2262191_-	hypothetical protein	NA	NA	NA	NA	NA
WP_059269789.1|2262192_2262540_-	hypothetical protein	NA	NA	NA	NA	NA
WP_059269790.1|2262582_2262933_-	hypothetical protein	NA	NA	NA	NA	NA
WP_131728881.1|2263315_2263777_-	hypothetical protein	NA	A0A0R6PJG5	Moraxella_phage	47.9	4.1e-07
WP_156430298.1|2263863_2264175_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156430299.1|2264323_2264956_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156430300.1|2264980_2265655_-	hypothetical protein	NA	NA	NA	NA	NA
WP_059269793.1|2265701_2266748_+	hypothetical protein	NA	V5URT9	Shigella_phage	53.5	4.7e-43
WP_059269794.1|2267070_2267565_+	RusA family crossover junction endodeoxyribonuclease	NA	A9YWY9	Burkholderia_phage	50.3	2.4e-29
>prophage 165
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2270814	2295268	6226215	plate,terminase,tail,capsid	Pseudomonas_phage(40.91%)	30	NA	NA
WP_082707142.1|2270814_2272341_-	hypothetical protein	NA	R9TRQ8	Vibrio_phage	24.5	9.1e-27
WP_156430383.1|2272606_2273224_+	hypothetical protein	NA	A0A1B0VRJ1	Pseudomonas_phage	62.4	2.1e-67
WP_156430303.1|2273233_2273455_-	hypothetical protein	NA	NA	NA	NA	NA
WP_059269797.1|2273522_2273996_+	DUF2280 domain-containing protein	NA	A0A125RNL6	Pseudomonas_phage	58.8	2.8e-35
WP_059269798.1|2273946_2275530_+|terminase	phage terminase large subunit	terminase	A0A291LBL3	Klebsiella_phage	46.1	2.7e-114
WP_059269799.1|2275529_2276810_+	DUF1073 domain-containing protein	NA	E5D056	Escherichia_phage	29.3	1.3e-29
WP_082707257.1|2276901_2277591_+|capsid	minor capsid protein	capsid	I3PGT9	Xanthomonas_phage	42.9	5.0e-33
WP_059269801.1|2277601_2278684_+	DUF2213 domain-containing protein	NA	E5AGA6	Erwinia_phage	40.2	1.1e-53
WP_059269802.1|2278683_2279136_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049054451.1|2279203_2280163_+	DUF2184 domain-containing protein	NA	A0A0N9SG07	Pseudomonas_phage	38.3	1.5e-56
WP_059269803.1|2280162_2280549_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059269804.1|2280551_2280926_+	DUF4054 domain-containing protein	NA	NA	NA	NA	NA
WP_059269805.1|2280915_2281368_+	hypothetical protein	NA	A0A2K9V3I1	Faecalibacterium_phage	32.1	2.1e-11
WP_059269806.1|2281372_2281786_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059269807.1|2281913_2282372_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059269808.1|2282438_2283797_+	DUF3383 family protein	NA	A0A0N9SJA3	Pseudomonas_phage	39.8	2.0e-81
WP_059269809.1|2283812_2284241_+	DUF3277 family protein	NA	A0A0N7GFC4	Pseudomonas_phage	38.2	6.7e-20
WP_059269810.1|2284240_2284750_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059269811.1|2284892_2287355_+	tape measure protein	NA	A0A0P0ZCJ4	Stx2-converting_phage	28.2	2.7e-20
WP_059269812.1|2287368_2287989_+	hypothetical protein	NA	I3PGV3	Xanthomonas_phage	31.3	5.0e-08
WP_059269813.1|2287993_2288326_+	hypothetical protein	NA	A0A0N9SG14	Pseudomonas_phage	40.6	1.0e-12
WP_059269814.1|2288312_2289230_+	hypothetical protein	NA	E5AGC0	Erwinia_phage	32.2	4.0e-38
WP_059269815.1|2289226_2289925_+	hypothetical protein	NA	A0A2H4J8H6	uncultured_Caudovirales_phage	30.2	7.1e-11
WP_059269816.1|2289924_2290293_+	hypothetical protein	NA	A0A218MAM6	Escherichia_phage	35.3	2.2e-11
WP_059269817.1|2290314_2291766_+|plate	baseplate J/gp47 family protein	plate	A0A0N9SH53	Pseudomonas_phage	36.0	2.5e-74
WP_059269818.1|2291765_2292431_+	DUF2612 domain-containing protein	NA	D4N460	Pseudomonas_phage	31.8	1.2e-15
WP_059269819.1|2292430_2293783_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059269820.1|2293782_2294232_+|tail	phage tail protein	tail	Q9ZXK5	Pseudomonas_virus	47.9	1.1e-25
WP_054446237.1|2294330_2294774_+	hypothetical protein	NA	A0A0A1IVG1	Pseudomonas_phage	35.0	2.0e-11
WP_059269821.1|2294776_2295268_+	hypothetical protein	NA	I6NSS1	Burkholderia_phage	62.3	2.8e-46
>prophage 166
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2299158	2299923	6226215		Anoxybacillus_phage(100.0%)	1	NA	NA
WP_059269824.1|2299158_2299923_+	phage antirepressor	NA	A0A2P1JTZ2	Anoxybacillus_phage	51.9	1.6e-24
>prophage 167
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2323202	2324000	6226215		Bacillus_virus(100.0%)	1	NA	NA
WP_049074962.1|2323202_2324000_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.3	1.9e-28
>prophage 168
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2328566	2333842	6226215		Bacillus_phage(33.33%)	5	NA	NA
WP_049074953.1|2328566_2330369_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	28.9	1.0e-45
WP_059269841.1|2330664_2331492_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	46.6	2.0e-68
WP_059269842.1|2331564_2331762_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049074948.1|2331758_2332934_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_054418021.1|2333122_2333842_+	metallophosphoesterase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	52.2	2.0e-64
>prophage 169
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2345990	2347205	6226215		Bacillus_phage(100.0%)	1	NA	NA
WP_059269845.1|2345990_2347205_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	31.9	4.0e-17
>prophage 170
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2351559	2352021	6226215		Xanthomonas_phage(100.0%)	1	NA	NA
WP_059269849.1|2351559_2352021_-	GatB/YqeY domain-containing protein	NA	A0A292GL36	Xanthomonas_phage	42.3	1.4e-15
>prophage 171
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2384402	2385143	6226215		Pithovirus(100.0%)	1	NA	NA
WP_059269864.1|2384402_2385143_-	ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	30.8	1.4e-12
>prophage 172
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2389469	2391107	6226215		Staphylococcus_phage(100.0%)	1	NA	NA
WP_059269866.1|2389469_2391107_-	acyl-CoA synthetase	NA	A0A2H4PQU7	Staphylococcus_phage	27.4	1.1e-27
>prophage 173
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2397443	2402277	6226215		Erysipelothrix_phage(50.0%)	4	NA	NA
WP_059269871.1|2397443_2398802_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.0	1.0e-45
WP_068952190.1|2398863_2399694_-	DUF72 domain-containing protein	NA	NA	NA	NA	NA
WP_049074829.1|2399998_2400631_+	LysE family translocator	NA	NA	NA	NA	NA
WP_174539037.1|2400735_2402277_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	A0A1X9I5H2	Streptococcus_phage	25.5	7.3e-16
>prophage 174
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2409176	2412532	6226215		Chrysochromulina_ericina_virus(50.0%)	3	NA	NA
WP_059269879.1|2409176_2410088_+	SDR family oxidoreductase	NA	A0A0N9R355	Chrysochromulina_ericina_virus	26.6	8.9e-14
WP_049074811.1|2410051_2410777_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_059269880.1|2410909_2412532_+	acyl-CoA synthetase	NA	A0A2H4PQU7	Staphylococcus_phage	31.3	3.9e-60
>prophage 175
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2424953	2425997	6226215		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_049074779.1|2424953_2425997_-	hydroxyacid dehydrogenase	NA	M1H9J0	Paramecium_bursaria_Chlorella_virus	31.5	1.0e-29
>prophage 176
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2433142	2434774	6226215		Bacillus_virus(100.0%)	1	NA	NA
WP_059269897.1|2433142_2434774_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	27.6	2.7e-13
>prophage 177
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2440130	2441807	6226215		Bacillus_phage(100.0%)	1	NA	NA
WP_059269902.1|2440130_2441807_-	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	38.2	4.3e-22
>prophage 178
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2452580	2455112	6226215		Escherichia_phage(100.0%)	1	NA	NA
WP_059269913.1|2452580_2455112_+	trimethylamine-N-oxide reductase TorA	NA	A0A077SK27	Escherichia_phage	28.7	2.3e-67
>prophage 179
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2491676	2493005	6226215		Burkholderia_virus(100.0%)	1	NA	NA
WP_059269936.1|2491676_2493005_+	MHS family MFS transporter	NA	Q6JIH2	Burkholderia_virus	34.9	1.9e-49
>prophage 180
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2503835	2505734	6226215		Bacillus_phage(100.0%)	1	NA	NA
WP_059269943.1|2503835_2505734_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.9	1.7e-30
>prophage 181
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2511451	2516444	6226215		Staphylococcus_phage(33.33%)	5	NA	NA
WP_059269946.1|2511451_2513083_+	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	29.8	3.5e-37
WP_059269947.1|2513167_2513932_+	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	39.2	2.4e-12
WP_054416045.1|2513990_2514554_+	DUF296 domain-containing protein	NA	NA	NA	NA	NA
WP_049074612.1|2514556_2514946_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_059269949.1|2515007_2516444_-	chromate efflux transporter	NA	A0A219VHC2	Ochrobactrum_phage	72.6	2.6e-39
>prophage 182
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2521334	2524955	6226215		Bacillus_phage(100.0%)	1	NA	NA
WP_059269959.1|2521334_2524955_-	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.2	2.4e-38
>prophage 183
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2550596	2551373	6226215		Trichoplusia_ni_ascovirus(100.0%)	1	NA	NA
WP_059269992.1|2550596_2551373_-	3-oxoacyl-ACP reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	28.7	1.4e-12
>prophage 184
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2559990	2562486	6226215		Streptococcus_phage(100.0%)	1	NA	NA
WP_059269998.1|2559990_2562486_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.0	8.7e-128
>prophage 185
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2572224	2573628	6226215		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_059270010.1|2572224_2573628_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	24.0	3.7e-35
>prophage 186
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2584891	2587504	6226215		Enterobacteria_phage(100.0%)	1	NA	NA
WP_059270022.1|2584891_2587504_+	type II secretion system secretin GspD	NA	A7BJX1	Enterobacteria_phage	32.3	3.8e-33
>prophage 187
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2610873	2612733	6226215		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_156430387.1|2610873_2612733_+	dipeptide ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	22.9	8.2e-06
>prophage 188
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2621119	2624302	6226215		Leptospira_phage(100.0%)	1	NA	NA
WP_059270049.1|2621119_2624302_+	efflux RND transporter permease subunit	NA	S5VL66	Leptospira_phage	19.0	3.0e-16
>prophage 189
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2630432	2631284	6226215		Enterococcus_phage(100.0%)	1	NA	NA
WP_024068618.1|2630432_2631284_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.4	6.8e-32
>prophage 190
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2638483	2640256	6226215		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_059270058.1|2638483_2640256_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.8	7.8e-38
>prophage 191
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2651857	2652238	6226215		Bacillus_thuringiensis_phage(100.0%)	1	NA	NA
WP_006387511.1|2651857_2652238_+	response regulator	NA	Q56AR1	Bacillus_thuringiensis_phage	32.8	1.2e-09
>prophage 192
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2658776	2661559	6226215		Bacillus_thuringiensis_phage(50.0%)	3	NA	NA
WP_006387517.1|2658776_2659166_+	chemotaxis response regulator CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	3.7e-09
WP_049074394.1|2659174_2659807_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_059272970.1|2660041_2661559_+	chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	51.2	3.2e-08
>prophage 193
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2676532	2677516	6226215		Bacillus_phage(100.0%)	1	NA	NA
WP_059270076.1|2676532_2677516_+	flagellar assembly peptidoglycan hydrolase FlgJ	NA	Q9ZXE4	Bacillus_phage	36.3	3.3e-14
>prophage 194
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2687279	2688875	6226215		Salmonella_phage(100.0%)	1	NA	NA
WP_059270085.1|2687279_2688875_+	PAS domain-containing methyl-accepting chemotaxis protein	NA	A0A1B0V854	Salmonella_phage	54.3	6.3e-39
>prophage 195
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2714216	2715737	6226215		Mollivirus(100.0%)	1	NA	NA
WP_006385207.1|2714216_2715737_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	43.5	3.8e-94
>prophage 196
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2725923	2726688	6226215		Flavobacterium_phage(100.0%)	1	NA	NA
WP_049074264.1|2725923_2726688_+	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	36.8	4.5e-19
>prophage 197
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2736889	2737498	6226215		Emiliania_huxleyi_virus(100.0%)	1	NA	NA
WP_059270135.1|2736889_2737498_+	ribonuclease HII	NA	D2TEQ2	Emiliania_huxleyi_virus	40.7	9.2e-23
>prophage 198
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2740958	2743325	6226215		Hokovirus(100.0%)	1	NA	NA
WP_059270141.1|2740958_2743325_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	36.5	1.5e-169
>prophage 199
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2747588	2752640	6226215		Moumouvirus(33.33%)	6	NA	NA
WP_082707258.1|2747588_2748431_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	A0A2P1EL10	Moumouvirus	52.9	6.5e-19
WP_059270147.1|2748542_2749280_-	glutamine amidotransferase	NA	NA	NA	NA	NA
WP_006394517.1|2749436_2749877_+	NfeD family protein	NA	NA	NA	NA	NA
WP_049074219.1|2750027_2750954_+	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA	NA
WP_059270149.1|2750980_2752171_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.5	6.2e-15
WP_006385177.1|2752172_2752640_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	46.5	1.9e-28
>prophage 200
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2760710	2761334	6226215		Pseudomonas_phage(100.0%)	1	NA	NA
WP_049074197.1|2760710_2761334_+	dTMP kinase	NA	Q2Z0N0	Pseudomonas_phage	36.3	9.1e-26
>prophage 201
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2766653	2767412	6226215		Planktothrix_phage(100.0%)	1	NA	NA
WP_162489640.1|2766653_2767412_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	37.9	6.3e-29
>prophage 202
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2776928	2777423	6226215		Canarypox_virus(100.0%)	1	NA	NA
WP_049074158.1|2776928_2777423_-	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	40.8	1.0e-27
>prophage 203
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2786091	2789367	6226215		uncultured_Caudovirales_phage(50.0%)	2	NA	NA
WP_049074153.1|2786091_2787783_-	PAS domain-containing methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	56.9	2.6e-06
WP_059270187.1|2787948_2789367_-	deoxyribodipyrimidine photo-lyase	NA	A0A1V0CPD8	Kaumoebavirus	29.6	1.2e-36
>prophage 204
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2794544	2795933	6226215		Chrysochromulina_ericina_virus(100.0%)	1	NA	NA
WP_059270191.1|2794544_2795933_-	ATP-dependent RNA helicase DbpA	NA	A0A0N9Q9J4	Chrysochromulina_ericina_virus	32.7	1.9e-52
>prophage 205
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2803328	2804960	6226215		Bacillus_virus(100.0%)	1	NA	NA
WP_059270207.1|2803328_2804960_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	27.0	1.2e-13
>prophage 206
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2809703	2815010	6226215		Enterobacterial_phage(100.0%)	1	NA	NA
WP_059270216.1|2809703_2815010_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	Q9LA58	Enterobacterial_phage	40.5	1.2e-105
>prophage 207
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2819172	2820009	6226215		Bacillus_virus(100.0%)	1	NA	NA
WP_059270224.1|2819172_2820009_-	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	38.0	5.7e-31
>prophage 208
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2823455	2824001	6226215		Acinetobacter_phage(100.0%)	1	NA	NA
WP_049074114.1|2823455_2824001_-	GTP cyclohydrolase I FolE	NA	A0A0P0HSD2	Acinetobacter_phage	63.3	1.0e-57
>prophage 209
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2842317	2844518	6226215		Bacillus_phage(50.0%)	2	NA	NA
WP_049074082.1|2842317_2843049_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	34.2	6.9e-33
WP_059270254.1|2843045_2844518_+	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.1	2.5e-13
>prophage 210
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2851720	2853721	6226215		Clostridium_phage(100.0%)	1	NA	NA
WP_059270262.1|2851720_2853721_-	ribonucleoside triphosphate reductase	NA	D9ZNH0	Clostridium_phage	44.7	1.4e-139
>prophage 211
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2870983	2872546	6226215		Escherichia_phage(100.0%)	1	NA	NA
WP_059270288.1|2870983_2872546_+	nitrate reductase subunit beta	NA	A0A077SL61	Escherichia_phage	43.6	7.1e-19
>prophage 212
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2884333	2888018	6226215		uncultured_Mediterranean_phage(50.0%)	3	NA	NA
WP_059270301.1|2884333_2885374_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	41.5	4.5e-70
WP_059270303.1|2885543_2886683_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_054416933.1|2886722_2888018_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	A0A0B5JD48	Pandoravirus	27.5	1.2e-16
>prophage 213
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2891732	2892545	6226215		Cedratvirus(100.0%)	1	NA	NA
WP_049074007.1|2891732_2892545_+	ABC transporter ATP-binding protein	NA	A0A1M7XV31	Cedratvirus	29.2	4.8e-11
>prophage 214
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2906566	2907451	6226215		Burkholderia_virus(100.0%)	1	NA	NA
WP_059270321.1|2906566_2907451_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	50.0	6.7e-06
>prophage 215
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2925780	2926632	6226215		Cedratvirus(100.0%)	1	NA	NA
WP_054416963.1|2925780_2926632_+	amino acid ABC transporter ATP-binding protein	NA	A0A1M7XV31	Cedratvirus	30.4	5.2e-16
>prophage 216
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2954112	2955696	6226215		Hepacivirus(100.0%)	1	NA	NA
WP_059270366.1|2954112_2955696_+	AMP-binding protein	NA	Q75ZG1	Hepacivirus	22.5	4.2e-19
>prophage 217
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2962412	2964047	6226215		Cedratvirus(50.0%)	2	NA	NA
WP_026383076.1|2962412_2963165_+	amino acid ABC transporter ATP-binding protein	NA	A0A285PWH2	Cedratvirus	28.6	1.5e-14
WP_059270375.1|2963222_2964047_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.9	4.6e-09
>prophage 218
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2969665	2970907	6226215		Salmonella_phage(100.0%)	1	NA	NA
WP_156430314.1|2969665_2970907_-	MFS transporter	NA	S4TR35	Salmonella_phage	29.2	4.2e-22
>prophage 219
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2986748	2991196	6226215		Bacillus_virus(50.0%)	5	NA	NA
WP_059270391.1|2986748_2987588_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.4	4.2e-10
WP_059270393.1|2987592_2988048_-	azurin	NA	NA	NA	NA	NA
WP_054430501.1|2988079_2989156_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_059270395.1|2989176_2990298_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_059270397.1|2990512_2991196_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	33.0	9.0e-27
>prophage 220
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2995033	2995774	6226215		Planktothrix_phage(100.0%)	1	NA	NA
WP_049070976.1|2995033_2995774_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.9	4.1e-33
>prophage 221
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	2999445	3000462	6226215		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_006395105.1|2999445_3000462_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	41.4	3.4e-70
>prophage 222
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3015172	3016039	6226215		Bacillus_virus(100.0%)	1	NA	NA
WP_059270433.1|3015172_3016039_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.3	4.6e-28
>prophage 223
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3066426	3069816	6226215		Bacillus_phage(50.0%)	2	NA	NA
WP_054418164.1|3066426_3067272_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.5	5.5e-66
WP_059270479.1|3067434_3069816_+	catalase	NA	A0A2K9L0T1	Tupanvirus	49.1	2.5e-140
>prophage 224
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3085189	3086968	6226215		Loktanella_phage(100.0%)	1	NA	NA
WP_059270502.1|3085189_3086968_+	adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	NA	M4QT32	Loktanella_phage	39.5	1.6e-96
>prophage 225
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3101902	3102922	6226215		Tupanvirus(100.0%)	1	NA	NA
WP_059270521.1|3101902_3102922_+	histone deacetylase family protein	NA	A0A2K9L473	Tupanvirus	32.8	4.1e-23
>prophage 226
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3124804	3125800	6226215		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_167352816.1|3124804_3125800_+	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.9	2.9e-10
>prophage 227
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3152364	3153918	6226215		Bacillus_phage(100.0%)	1	NA	NA
WP_080977573.1|3152364_3153918_+	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	37.3	2.7e-18
>prophage 228
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3166677	3167991	6226215		Bacillus_phage(100.0%)	1	NA	NA
WP_059270585.1|3166677_3167991_+	HAMP domain-containing protein	NA	W8CYF6	Bacillus_phage	26.6	5.6e-17
>prophage 229
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3181660	3183238	6226215		Moraxella_phage(100.0%)	1	NA	NA
WP_059270589.1|3181660_3183238_-	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	43.4	2.4e-38
>prophage 230
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3189733	3191893	6226215		Acinetobacter_phage(100.0%)	1	NA	NA
WP_174539040.1|3189733_3191893_+	TonB-dependent siderophore receptor	NA	A0A0P0I887	Acinetobacter_phage	31.4	1.1e-06
>prophage 231
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3197120	3204291	6226215		uncultured_Caudovirales_phage(20.0%)	10	NA	NA
WP_059273000.1|3197120_3197957_+	universal stress protein	NA	A0A2H4J154	uncultured_Caudovirales_phage	25.1	4.4e-07
WP_059273001.1|3197967_3198909_-	2-hydroxyacid dehydrogenase	NA	A0A1B1IVB5	uncultured_Mediterranean_phage	30.6	2.9e-15
WP_059270603.1|3199019_3200198_+	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_049073601.1|3200228_3200381_-	DUF3309 domain-containing protein	NA	NA	NA	NA	NA
WP_167352789.1|3200425_3200587_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049073600.1|3200710_3201259_-	type 1 glutamine amidotransferase	NA	A0A0N7KVR4	Yellowstone_lake_phycodnavirus	32.2	2.3e-17
WP_059270605.1|3201389_3202421_+	DNA topoisomerase IB	NA	A0A0U2TSJ7	Niemeyer_virus	30.4	3.1e-31
WP_059270607.1|3202439_3202697_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049073597.1|3202956_3203298_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_059270608.1|3203406_3204291_+	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	41.7	2.9e-49
>prophage 232
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3221931	3223038	6226215		Edwardsiella_phage(100.0%)	1	NA	NA
WP_162489638.1|3221931_3223038_+	3-deoxy-7-phosphoheptulonate synthase	NA	A0A0B6VT43	Edwardsiella_phage	46.4	1.6e-81
>prophage 233
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3227950	3229585	6226215		Tupanvirus(100.0%)	1	NA	NA
WP_054419566.1|3227950_3229585_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	31.7	8.7e-68
>prophage 234
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3235294	3238165	6226215		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_059270640.1|3235294_3238165_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	24.6	6.7e-31
>prophage 235
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3242880	3245907	6226215		Bacillus_virus(50.0%)	3	NA	NA
WP_059270644.1|3242880_3243852_-	GGDEF domain-containing protein	NA	G3MA91	Bacillus_virus	33.1	1.6e-16
WP_100509592.1|3243993_3244815_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_059270645.1|3244968_3245907_+	arginase	NA	A0A1V0SJM8	Klosneuvirus	32.2	3.2e-22
>prophage 236
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3258718	3260188	6226215		Staphylococcus_phage(100.0%)	2	NA	NA
WP_059270660.1|3258718_3259420_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.1	4.5e-13
WP_049073551.1|3259420_3260188_-	high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG	NA	A0A2H4PQG7	Staphylococcus_phage	25.0	9.8e-14
>prophage 237
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3264048	3264573	6226215		Vibrio_phage(100.0%)	1	NA	NA
WP_049077771.1|3264048_3264573_-	queuosine precursor transporter	NA	A0A2I7SAW6	Vibrio_phage	36.5	5.0e-17
>prophage 238
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3268973	3273675	6226215		Bacillus_virus(50.0%)	4	NA	NA
WP_006386444.1|3268973_3270062_+	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	G3M9Y6	Bacillus_virus	30.7	8.7e-24
WP_049073545.1|3270154_3271036_-	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_049073544.1|3271118_3272222_-	serine hydrolase	NA	NA	NA	NA	NA
WP_059270664.1|3272382_3273675_-	HAMP domain-containing protein	NA	W8CYF6	Bacillus_phage	24.4	5.2e-15
>prophage 239
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3291003	3292572	6226215		Pithovirus(50.0%)	2	NA	NA
WP_059270672.1|3291003_3291504_-	DNA starvation/stationary phase protection protein	NA	W5S6G8	Pithovirus	35.1	2.2e-14
WP_054495533.1|3291621_3292572_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	25.1	3.3e-11
>prophage 240
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3304992	3308502	6226215		Anomala_cuprea_entomopoxvirus(50.0%)	3	NA	NA
WP_049077764.1|3304992_3305769_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	26.2	1.4e-15
WP_059270684.1|3305865_3306843_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_059270686.1|3307365_3308502_+	RNA ligase RtcB family protein	NA	A0A0K2CNT0	Brevibacillus_phage	26.6	1.7e-22
>prophage 241
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3313615	3314680	6226215		Ectocarpus_siliculosus_virus(100.0%)	1	NA	NA
WP_049073516.1|3313615_3314680_-	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.6	3.8e-08
>prophage 242
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3332898	3333492	6226215		Clostridium_phage(100.0%)	1	NA	NA
WP_054416668.1|3332898_3333492_+	C40 family peptidase	NA	A0A0A8WIF2	Clostridium_phage	40.4	8.7e-18
>prophage 243
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3339089	3343147	6226215		Bacillus_phage(33.33%)	4	NA	NA
WP_080977408.1|3339089_3339722_+	guanylate kinase	NA	A0A218KC48	Bacillus_phage	32.3	1.7e-11
WP_006394760.1|3339768_3339972_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_006394759.1|3339993_3342288_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.8	7.0e-07
WP_171904987.1|3342424_3343147_-	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	42.9	1.9e-35
>prophage 244
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3356447	3357170	6226215		Brazilian_cedratvirus(100.0%)	1	NA	NA
WP_054416680.1|3356447_3357170_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	29.3	1.2e-08
>prophage 245
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3373376	3377897	6226215		Bacillus_virus(50.0%)	4	NA	NA
WP_059270736.1|3373376_3374453_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.3	5.0e-32
WP_049073477.1|3374466_3376113_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_059270738.1|3376135_3377119_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_059270739.1|3377225_3377897_-	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	28.0	4.6e-07
>prophage 246
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3382577	3411297	6226215	tRNA	uncultured_Mediterranean_phage(14.29%)	29	NA	NA
WP_059270745.1|3382577_3383327_+	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	29.9	7.3e-14
WP_059270747.1|3383339_3384230_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_059270749.1|3384293_3385730_-	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
WP_049073470.1|3385933_3386662_-	glutathione peroxidase	NA	A0A1D8KSL1	Synechococcus_phage	55.3	2.1e-42
WP_049073469.1|3386832_3387033_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_059270751.1|3387197_3389504_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.2	7.4e-89
WP_020927477.1|3389500_3389893_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_059270753.1|3389956_3391462_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	25.5	1.9e-29
WP_059270754.1|3391626_3392379_-	hypothetical protein	NA	NA	NA	NA	NA
WP_059270756.1|3392743_3393352_-	hypothetical protein	NA	NA	NA	NA	NA
WP_059270758.1|3393521_3394301_-	3'-5' exonuclease	NA	NA	NA	NA	NA
WP_059270760.1|3394297_3395158_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A292GJG6	Xanthomonas_phage	41.0	7.6e-15
WP_171905038.1|3395175_3395940_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	45.8	3.6e-32
WP_049073461.1|3395984_3396743_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	52.0	1.2e-67
WP_049073460.1|3396921_3397563_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_059270763.1|3397635_3398667_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.4	1.6e-91
WP_054431353.1|3398776_3400069_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.3	4.2e-65
WP_059270765.1|3400153_3400510_-	VOC family protein	NA	NA	NA	NA	NA
WP_049073456.1|3400835_3401858_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_059270767.1|3402050_3402425_+	thioredoxin family protein	NA	V9SJ74	Achromobacter_phage	26.8	5.5e-10
WP_059270769.1|3402457_3403045_-	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	39.6	1.2e-19
WP_059270771.1|3403120_3403936_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_059270774.1|3403944_3404718_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_049073451.1|3404714_3405713_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_054417510.1|3405786_3406557_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.0	8.0e-32
WP_059270776.1|3406669_3407887_-	MFS transporter	NA	NA	NA	NA	NA
WP_049050954.1|3408010_3409615_-	ABC-F family ATPase	NA	A0A2K9L0W2	Tupanvirus	27.0	4.1e-54
WP_059270778.1|3409759_3410809_-	LD-carboxypeptidase	NA	NA	NA	NA	NA
WP_059270780.1|3410805_3411297_-|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	S4VYT2	Pandoravirus	38.2	1.7e-06
>prophage 247
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3442958	3443609	6226215		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_059270810.1|3442958_3443609_+	type B chloramphenicol O-acetyltransferase	NA	M1HKK6	Paramecium_bursaria_Chlorella_virus	39.9	3.7e-22
>prophage 248
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3448283	3451479	6226215		Bacillus_virus(33.33%)	3	NA	NA
WP_059270812.1|3448283_3449372_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	25.9	2.2e-14
WP_059270813.1|3449371_3450457_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.9	2.4e-05
WP_035360337.1|3450687_3451479_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	30.8	3.7e-24
>prophage 249
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3457719	3458682	6226215		Staphylococcus_phage(100.0%)	1	NA	NA
WP_059270816.1|3457719_3458682_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.2	1.2e-19
>prophage 250
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3478087	3479821	6226215		Yellowstone_lake_phycodnavirus(100.0%)	1	NA	NA
WP_059270836.1|3478087_3479821_+	thiamine pyrophosphate-binding protein	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	26.3	2.3e-34
>prophage 251
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3488703	3491931	6226215		Saccharomonospora_phage(100.0%)	1	NA	NA
WP_059270848.1|3488703_3491931_+	error-prone DNA polymerase	NA	Q8W6C3	Saccharomonospora_phage	26.1	2.0e-71
>prophage 252
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3496062	3502357	6226215		Streptomyces_phage(20.0%)	6	NA	NA
WP_059270855.1|3496062_3496713_+	NUDIX hydrolase	NA	A0A0E3JJF3	Streptomyces_phage	42.5	1.7e-11
WP_059270857.1|3496803_3497754_+	ribose-phosphate pyrophosphokinase	NA	A0A1Y0SWL4	Pseudomonas_phage	44.3	5.8e-48
WP_059270859.1|3497776_3499465_+	nicotinate phosphoribosyltransferase	NA	A0A1W6DY18	Aeromonas_phage	52.9	2.0e-152
WP_054417455.1|3499710_3500394_+	DUF1311 domain-containing protein	NA	A0A2I6UFG0	Klebsiella_phage	41.9	8.5e-09
WP_059273013.1|3500423_3501365_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_054417454.1|3501622_3502357_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.4	9.0e-33
>prophage 253
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3511002	3513144	6226215		Indivirus(100.0%)	1	NA	NA
WP_082707175.1|3511002_3513144_+	peptidase domain-containing ABC transporter	NA	A0A1V0SE00	Indivirus	29.0	1.8e-17
>prophage 254
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3519169	3519721	6226215		Escherichia_phage(100.0%)	1	NA	NA
WP_059270876.1|3519169_3519721_-	cytochrome b	NA	A0A0U2QLA7	Escherichia_phage	42.1	8.6e-20
>prophage 255
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3528247	3529072	6226215		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_054472387.1|3528247_3529072_-	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	24.6	1.5e-12
>prophage 256
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3534954	3546803	6226215	holin	Bacillus_virus(20.0%)	10	NA	NA
WP_059270895.1|3534954_3535665_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	24.0	9.7e-08
WP_059270897.1|3535661_3537629_-	ATP-binding cassette domain-containing protein	NA	A0A1J0FA64	Only_Syngen_Nebraska_virus	27.9	2.6e-10
WP_059270899.1|3537621_3538455_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_054502774.1|3538510_3539677_-	substrate-binding protein	NA	NA	NA	NA	NA
WP_059270901.1|3539716_3540607_-	nitrilase family protein	NA	M1I6H3	Paramecium_bursaria_Chlorella_virus	35.6	3.0e-30
WP_059270903.1|3540871_3541300_+	VOC family protein	NA	NA	NA	NA	NA
WP_059270905.1|3541350_3542796_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	35.1	7.7e-44
WP_059270907.1|3542894_3544070_+	low temperature requirement protein A	NA	NA	NA	NA	NA
WP_059270910.1|3544106_3544946_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_059270912.1|3545150_3546803_+|holin	choline dehydrogenase	holin	A0A1V0SI18	Klosneuvirus	30.4	2.9e-63
>prophage 257
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3565853	3566522	6226215		Synechococcus_phage(100.0%)	1	NA	NA
WP_059270945.1|3565853_3566522_-	HAD family phosphatase	NA	A0A1D8KNV9	Synechococcus_phage	28.5	9.5e-05
>prophage 258
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3573436	3574246	6226215		Pseudomonas_phage(100.0%)	1	NA	NA
WP_006395367.1|3573436_3574246_+	nucleotidyltransferase domain-containing protein	NA	Q8SCS5	Pseudomonas_phage	41.8	3.8e-48
>prophage 259
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3595945	3598630	6226215		Vibrio_phage(100.0%)	1	NA	NA
WP_059270979.1|3595945_3598630_-	type VI secretion system ATPase TssH	NA	A0A2I7SAX5	Vibrio_phage	32.7	6.2e-87
>prophage 260
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3619733	3622607	6226215		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_059270995.1|3619733_3622607_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	24.6	3.9e-31
>prophage 261
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3637826	3642309	6226215		Salmonella_phage(50.0%)	3	NA	NA
WP_059271010.1|3637826_3638354_-	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	48.0	2.7e-39
WP_156430394.1|3638540_3639785_-	DUF445 family protein	NA	NA	NA	NA	NA
WP_059271015.1|3641028_3642309_+	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	54.5	4.5e-120
>prophage 262
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3678458	3690349	6226215		Bacillus_virus(25.0%)	10	NA	NA
WP_059271065.1|3678458_3679172_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.0	2.6e-29
WP_139122144.1|3679215_3680145_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_059271069.1|3680186_3681842_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_054415589.1|3681885_3682929_-	PleD family two-component system response regulator	NA	A0A127AWB9	Bacillus_phage	36.8	8.1e-19
WP_059271071.1|3682965_3683982_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_054415594.1|3683978_3686237_-	hybrid sensor histidine kinase/response regulator	NA	Q56AR1	Bacillus_thuringiensis_phage	29.7	7.9e-11
WP_139122145.1|3686233_3686893_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_082707180.1|3686906_3688190_-	hypothetical protein	NA	NA	NA	NA	NA
WP_059271075.1|3688186_3688723_-	purine-binding chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_054415599.1|3688729_3690349_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	42.7	2.3e-12
>prophage 263
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3694372	3695902	6226215		Mycobacterium_phage(100.0%)	1	NA	NA
WP_059271077.1|3694372_3695902_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	30.5	4.2e-24
>prophage 264
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3729465	3730440	6226215		Acanthamoeba_polyphaga_mimivirus(100.0%)	1	NA	NA
WP_059271121.1|3729465_3730440_+	zinc-dependent alcohol dehydrogenase family protein	NA	A0A0G2Y405	Acanthamoeba_polyphaga_mimivirus	25.8	3.6e-05
>prophage 265
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3735055	3738229	6226215		Hokovirus(50.0%)	2	NA	NA
WP_059271132.1|3735055_3736648_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	35.0	7.2e-19
WP_049073345.1|3736768_3738229_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.5	5.5e-98
>prophage 266
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3744235	3748035	6226215		Acanthocystis_turfacea_Chlorella_virus(50.0%)	7	NA	NA
WP_059271145.1|3744235_3745201_+	2-hydroxyacid dehydrogenase	NA	M1HUT5	Acanthocystis_turfacea_Chlorella_virus	27.2	2.7e-16
WP_156430332.1|3745272_3745521_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054444037.1|3745549_3745792_-	hypothetical protein	NA	NA	NA	NA	NA
WP_059271148.1|3745853_3746282_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_006387073.1|3746339_3746549_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100503621.1|3746741_3747017_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059271150.1|3747075_3748035_-	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	31.7	4.7e-05
>prophage 267
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3758961	3759984	6226215		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_059271170.1|3758961_3759984_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.6	9.1e-15
>prophage 268
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3827765	3828674	6226215		Enterobacteria_phage(100.0%)	1	NA	NA
WP_080977402.1|3827765_3828674_+	DNA/RNA non-specific endonuclease	NA	H6X497	Enterobacteria_phage	33.7	1.1e-22
>prophage 269
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3840848	3843533	6226215		Hokovirus(100.0%)	1	NA	NA
WP_059271280.1|3840848_3843533_-	hybrid sensor histidine kinase/response regulator	NA	A0A1V0SGX0	Hokovirus	24.7	3.8e-20
>prophage 270
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3876178	3882065	6226215		uncultured_Caudovirales_phage(50.0%)	2	NA	NA
WP_059271308.1|3876178_3877804_-	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	33.0	2.0e-16
WP_059271310.1|3878015_3882065_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	1.2e-158
>prophage 271
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3889671	3892632	6226215		Tupanvirus(50.0%)	2	NA	NA
WP_049073248.1|3889671_3890850_+	cyclopropane fatty acyl phospholipid synthase	NA	A0A2K9L4K8	Tupanvirus	43.8	2.1e-79
WP_059271320.1|3890988_3892632_-	GMC family oxidoreductase N-terminal domain-containing protein	NA	A0A1V0S9M4	Catovirus	29.9	2.9e-55
>prophage 272
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3906239	3906536	6226215		Escherichia_phage(100.0%)	1	NA	NA
WP_059271336.1|3906239_3906536_-	HigA family addiction module antidote protein	NA	A0A2P1MXE5	Escherichia_phage	41.1	1.4e-08
>prophage 273
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3911109	3914221	6226215		uncultured_virus(66.67%)	4	NA	NA
WP_049073231.1|3911109_3911427_+	co-chaperone GroES	NA	A0A221S322	uncultured_virus	49.5	4.6e-18
WP_049073230.1|3911458_3913081_+	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	60.9	3.2e-171
WP_054415783.1|3913356_3913800_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA	NA
WP_054415784.1|3913834_3914221_+	Hsp20/alpha crystallin family protein	NA	A0A1B2LRT2	Wolbachia_phage	27.9	1.7e-06
>prophage 274
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3921103	3923022	6226215		Diadromus_pulchellus_ascovirus(50.0%)	3	NA	NA
WP_059271343.1|3921103_3921865_+	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	34.5	2.9e-18
WP_059271346.1|3921879_3922494_-	ATP-binding cassette domain-containing protein	NA	NA	NA	NA	NA
WP_059271349.1|3922698_3923022_-	hypothetical protein	NA	A0A0R6PIH8	Moraxella_phage	56.9	1.2e-08
>prophage 275
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3927432	3933245	6226215		Brazilian_cedratvirus(33.33%)	5	NA	NA
WP_059271356.1|3927432_3928191_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	29.0	2.3e-15
WP_054415973.1|3928187_3929117_-	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA	NA
WP_059273028.1|3929157_3930129_-	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4IY97	uncultured_Caudovirales_phage	44.1	5.5e-62
WP_156430340.1|3930183_3931158_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_059271358.1|3931223_3933245_-	ligand-gated channel protein	NA	A0A0P0I887	Acinetobacter_phage	36.2	1.4e-11
>prophage 276
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3936688	3941414	6226215		Planktothrix_phage(50.0%)	4	NA	NA
WP_049073211.1|3936688_3937378_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	39.6	2.4e-35
WP_049073210.1|3937370_3938651_-	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_059271366.1|3938793_3939732_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059271368.1|3939713_3941414_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.6	2.4e-52
>prophage 277
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3949005	3952442	6226215	tRNA	Pseudomonas_phage(50.0%)	3	NA	NA
WP_100503574.1|3949005_3950109_+	peptide chain release factor 2	NA	W8EDB3	Pseudomonas_phage	38.0	9.8e-07
WP_059271372.1|3950152_3950908_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_059271374.1|3950918_3952442_+|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.2	1.1e-83
>prophage 278
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3958417	3961062	6226215		Catovirus(50.0%)	2	NA	NA
WP_059271386.1|3958417_3960271_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	24.5	5.4e-50
WP_059271388.1|3960267_3961062_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	22.6	1.6e-11
>prophage 279
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3964243	3965041	6226215		Only_Syngen_Nebraska_virus(100.0%)	1	NA	NA
WP_169538040.1|3964243_3965041_-	ATP-binding cassette domain-containing protein	NA	A0A1J0FA64	Only_Syngen_Nebraska_virus	25.5	3.9e-05
>prophage 280
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3969973	3973148	6226215		Chrysochromulina_ericina_virus(33.33%)	4	NA	NA
WP_059271395.1|3969973_3971836_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	39.3	2.8e-99
WP_059271397.1|3971901_3972414_-	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA	NA
WP_006386172.1|3972417_3972741_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	54.2	3.0e-25
WP_006386173.1|3972743_3973148_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	76.6	8.2e-52
>prophage 281
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3979449	3989563	6226215	protease	Faecalibacterium_phage(12.5%)	10	NA	NA
WP_049073185.1|3979449_3980100_+	transcriptional repressor LexA	NA	A0A2K9V3G4	Faecalibacterium_phage	33.1	1.2e-15
WP_059271399.1|3980215_3982666_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.3	2.7e-222
WP_049073183.1|3982917_3984216_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.9	8.3e-130
WP_049073182.1|3984311_3984965_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	56.2	1.7e-54
WP_049073181.1|3984969_3986280_-	trigger factor	NA	NA	NA	NA	NA
WP_006386184.1|3986447_3987203_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_049073180.1|3987463_3988009_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	32.9	2.9e-20
WP_006225311.1|3988099_3988306_-	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	59.7	1.4e-15
WP_054415820.1|3988583_3989147_-	DUF924 family protein	NA	A0A1V0SIY0	Klosneuvirus	40.5	3.5e-16
WP_006220190.1|3989359_3989563_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	63.6	7.3e-17
>prophage 282
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	3998450	4002511	6226215		Cafeteria_roenbergensis_virus(50.0%)	4	NA	NA
WP_059271408.1|3998450_3999308_-	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	41.3	2.5e-50
WP_059271410.1|3999545_4000505_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_059271412.1|4000549_4001767_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049073162.1|4001800_4002511_-	aquaporin Z	NA	A0A1B1ISL4	uncultured_Mediterranean_phage	50.0	9.1e-06
>prophage 283
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4016553	4018488	6226215		Tupanvirus(100.0%)	1	NA	NA
WP_100509190.1|4016553_4018488_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	32.9	9.9e-71
>prophage 284
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4027738	4030030	6226215		Bacillus_phage(100.0%)	1	NA	NA
WP_049073144.1|4027738_4030030_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	35.8	1.0e-106
>prophage 285
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4034821	4041245	6226215	tRNA	Synechococcus_phage(33.33%)	5	NA	NA
WP_049073141.1|4034821_4035487_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.1	6.3e-25
WP_059271438.1|4035550_4036516_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_059271440.1|4036505_4039367_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	26.0	9.8e-75
WP_049073138.1|4039369_4039894_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_059271442.1|4040048_4041245_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	29.3	3.8e-36
>prophage 286
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4050128	4050899	6226215		Planktothrix_phage(100.0%)	1	NA	NA
WP_049073126.1|4050128_4050899_-	ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA	NA	G9BWD6	Planktothrix_phage	38.6	1.0e-31
>prophage 287
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4066900	4068435	6226215		Staphylococcus_phage(100.0%)	2	NA	NA
WP_054430083.1|4066900_4067638_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	24.3	1.4e-09
WP_006383977.1|4067634_4068435_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	24.3	5.4e-15
>prophage 288
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4079669	4081979	6226215	protease	Agrobacterium_phage(100.0%)	1	NA	NA
WP_054415980.1|4079669_4081979_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.4	1.6e-163
>prophage 289
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4089630	4091031	6226215	protease	uncultured_Mediterranean_phage(66.67%)	3	NA	NA
WP_049073105.1|4089630_4089945_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.1	2.9e-12
WP_006220277.1|4090171_4090417_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	75.0	2.9e-20
WP_100504365.1|4090518_4091031_+	DUF192 domain-containing protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	39.2	3.6e-12
>prophage 290
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4100045	4101410	6226215		Indivirus(100.0%)	1	NA	NA
WP_059271491.1|4100045_4101410_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	31.7	3.2e-31
>prophage 291
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4122182	4123139	6226215		Only_Syngen_Nebraska_virus(100.0%)	1	NA	NA
WP_059271509.1|4122182_4123139_+	2-hydroxyacid dehydrogenase	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	28.1	5.9e-16
>prophage 292
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4139103	4139496	6226215		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_054415889.1|4139103_4139496_-	CrcB family protein	NA	A0A2H4J148	uncultured_Caudovirales_phage	46.7	1.3e-14
>prophage 293
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4150890	4153497	6226215		Agrobacterium_phage(100.0%)	1	NA	NA
WP_054415897.1|4150890_4153497_-	ATP-dependent chaperone ClpB	NA	A0A223W0B1	Agrobacterium_phage	33.3	6.8e-123
>prophage 294
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4179189	4180101	6226215		Streptococcus_phage(100.0%)	1	NA	NA
WP_171905021.1|4179189_4180101_+	3-phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	33.3	1.9e-27
>prophage 295
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4186147	4193518	6226215		Catovirus(33.33%)	7	NA	NA
WP_059271574.1|4186147_4187377_-	acetamidase/formamidase family protein	NA	A0A1V0S8X7	Catovirus	56.1	3.5e-130
WP_059271577.1|4187578_4188184_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_059271579.1|4188362_4188728_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059271580.1|4188782_4190258_-	aminotransferase class V-fold PLP-dependent enzyme	NA	A0A1V0SL42	Klosneuvirus	28.8	2.6e-47
WP_059271582.1|4190368_4190869_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_054415947.1|4191142_4191655_+	winged helix DNA-binding protein	NA	NA	NA	NA	NA
WP_174539052.1|4191706_4193518_+	dipeptide ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.7	2.6e-12
>prophage 296
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4206922	4211569	6226215		Moumouvirus(50.0%)	4	NA	NA
WP_059271598.1|4206922_4208188_+	carboxylesterase/lipase family protein	NA	M1PNU1	Moumouvirus	38.1	1.8e-20
WP_054502005.1|4208243_4209194_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_059273043.1|4209180_4209744_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_059271600.1|4210075_4211569_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	29.8	1.0e-38
>prophage 297
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4216831	4218664	6226215		Planktothrix_phage(100.0%)	1	NA	NA
WP_059271610.1|4216831_4218664_-	ABC transporter ATP-binding protein/permease	NA	G9BWD6	Planktothrix_phage	27.9	8.1e-06
>prophage 298
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4221828	4223442	6226215		Bacillus_phage(100.0%)	1	NA	NA
WP_059273044.1|4221828_4223442_+	EAL domain-containing protein	NA	A0A127AWB9	Bacillus_phage	33.8	4.6e-13
>prophage 299
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4227103	4230099	6226215		Pandoravirus(50.0%)	3	NA	NA
WP_059271614.1|4227103_4228300_-	aminotransferase class V-fold PLP-dependent enzyme	NA	A0A0B5JD48	Pandoravirus	30.6	7.6e-21
WP_026383015.1|4228346_4229003_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_059271615.1|4228980_4230099_-	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	31.6	6.0e-20
>prophage 300
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4256048	4271382	6226215		Tupanvirus(50.0%)	4	NA	NA
WP_059273046.1|4256048_4268066_-	type I polyketide synthase	NA	A0A2K9KZV5	Tupanvirus	35.8	9.9e-60
WP_156430344.1|4268194_4268413_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059271652.1|4268660_4269842_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_059271653.1|4269846_4271382_+	AMP-binding protein	NA	A0A2H4PQM9	Staphylococcus_phage	25.4	4.1e-27
>prophage 301
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4279493	4280417	6226215		Staphylococcus_phage(100.0%)	1	NA	NA
WP_059271658.1|4279493_4280417_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	31.9	4.8e-23
>prophage 302
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4284768	4285563	6226215		Bacillus_virus(100.0%)	1	NA	NA
WP_059271664.1|4284768_4285563_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	37.6	8.6e-29
>prophage 303
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4328508	4333694	6226215		EBPR_siphovirus(50.0%)	5	NA	NA
WP_054417394.1|4328508_4329063_-	helix-turn-helix domain-containing protein	NA	F8TVE5	EBPR_siphovirus	39.5	2.7e-05
WP_059271693.1|4329198_4329981_-	aldolase	NA	NA	NA	NA	NA
WP_059271695.1|4329994_4330630_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_059271697.1|4330632_4331589_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_059271699.1|4332056_4333694_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.8	3.8e-15
>prophage 304
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4363181	4368090	6226215		Acinetobacter_phage(50.0%)	4	NA	NA
WP_054417366.1|4363181_4364195_-	XdhC family protein	NA	A0A0P0IKN7	Acinetobacter_phage	27.2	1.0e-10
WP_059271738.1|4364238_4366527_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_054417364.1|4366526_4366997_-	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_059271740.1|4367040_4368090_-	NAD(P)-dependent alcohol dehydrogenase	NA	A0A2K9L339	Tupanvirus	43.6	3.2e-71
>prophage 305
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4371606	4375283	6226215		Rhizobium_phage(50.0%)	2	NA	NA
WP_059271748.1|4371606_4374264_-	DNA ligase D	NA	A0A068CDF3	Rhizobium_phage	38.2	3.6e-55
WP_059271750.1|4374266_4375283_-	Ku protein	NA	A0A0A1EPK3	Mycobacterium_phage	32.9	1.1e-31
>prophage 306
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4386907	4388410	6226215		Streptococcus_phage(100.0%)	1	NA	NA
WP_059271764.1|4386907_4388410_-	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	24.3	2.0e-18
>prophage 307
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4400197	4400932	6226215		Planktothrix_phage(100.0%)	1	NA	NA
WP_059271782.1|4400197_4400932_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.1	3.1e-09
>prophage 308
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4413077	4413848	6226215		Trichoplusia_ni_ascovirus(100.0%)	1	NA	NA
WP_059271797.1|4413077_4413848_-	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.9	2.2e-13
>prophage 309
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4417025	4421427	6226215		Planktothrix_phage(50.0%)	4	NA	NA
WP_020928765.1|4417025_4417757_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.2	1.1e-27
WP_059271805.1|4417810_4418629_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_059271806.1|4418642_4419746_+	mandelate racemase/muconate lactonizing enzyme family protein	NA	NA	NA	NA	NA
WP_059271808.1|4419828_4421427_-	GMC family oxidoreductase N-terminal domain-containing protein	NA	A0A1V0S9M4	Catovirus	28.7	6.5e-52
>prophage 310
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4431454	4433933	6226215		Staphylococcus_phage(100.0%)	2	NA	NA
WP_054417313.1|4431454_4433236_+	branched-chain amino acid ABC transporter ATP-binding protein/permease	NA	A0A2H4PQG7	Staphylococcus_phage	25.9	3.8e-16
WP_006387150.1|4433228_4433933_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	24.6	5.3e-14
>prophage 311
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4469863	4471558	6226215		Planktothrix_phage(100.0%)	1	NA	NA
WP_049072994.1|4469863_4471558_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.1	1.7e-13
>prophage 312
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4478325	4490429	6226215		Bacillus_phage(40.0%)	9	NA	NA
WP_059271854.1|4478325_4480416_-	ATP-dependent helicase	NA	A7KV33	Bacillus_phage	28.4	2.8e-63
WP_059271856.1|4480526_4481438_+	DUF72 domain-containing protein	NA	NA	NA	NA	NA
WP_049077654.1|4481604_4483074_-	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	26.9	1.6e-17
WP_054417288.1|4483229_4484492_+	4-aminobutyrate--2-oxoglutarate transaminase	NA	A0A1V0SKB7	Klosneuvirus	30.4	1.3e-31
WP_049072985.1|4484616_4486086_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_049072984.1|4486284_4487139_+	inositol monophosphatase family protein	NA	NA	NA	NA	NA
WP_049072983.1|4487332_4488160_-	NAD-dependent protein deacetylase	NA	A0A068EPD4	Bacillus_phage	26.0	6.2e-14
WP_049072982.1|4488245_4489193_-	serine acetyltransferase	NA	NA	NA	NA	NA
WP_054417286.1|4489376_4490429_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L5H6	Tupanvirus	39.2	1.2e-65
>prophage 313
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4499244	4503155	6226215		Hokovirus(33.33%)	4	NA	NA
WP_049072975.1|4499244_4500675_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	29.7	6.7e-48
WP_049077650.1|4500712_4501075_+	VanZ family protein	NA	NA	NA	NA	NA
WP_006387741.1|4501085_4502195_+	GDP-mannose 4,6-dehydratase	NA	M1HAR7	Acanthocystis_turfacea_Chlorella_virus	66.9	1.7e-136
WP_059271866.1|4502201_4503155_+	GDP-L-fucose synthase	NA	A0A1J0F9I6	Only_Syngen_Nebraska_virus	56.1	2.3e-97
>prophage 314
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4527702	4534651	6226215		Staphylococcus_phage(33.33%)	5	NA	NA
WP_059271890.1|4527702_4529394_+	AMP-binding protein	NA	A0A2H4PQM9	Staphylococcus_phage	28.3	8.8e-31
WP_059271892.1|4529448_4531017_-	sulfatase-like hydrolase/transferase	NA	A0A2K9L727	Tupanvirus	22.1	2.9e-12
WP_059271894.1|4531027_4532002_-	Bug family tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_054417333.1|4532204_4532726_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_059271896.1|4532797_4534651_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	24.9	6.4e-27
>prophage 315
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4544519	4545293	6226215		Escherichia_phage(100.0%)	1	NA	NA
WP_059271904.1|4544519_4545293_+	NAD-dependent deacylase	NA	A0A220NU33	Escherichia_phage	41.4	8.4e-13
>prophage 316
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4559278	4566586	6226215		Hokovirus(50.0%)	3	NA	NA
WP_082707272.1|4559278_4562488_-	hybrid sensor histidine kinase/response regulator	NA	A0A1V0SGX0	Hokovirus	40.1	8.5e-35
WP_059271928.1|4562543_4563818_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_059271930.1|4563814_4566586_-	response regulator	NA	Q8QKV7	Ectocarpus_siliculosus_virus	27.3	1.1e-30
>prophage 317
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4572590	4574045	6226215	tRNA	Tupanvirus(100.0%)	1	NA	NA
WP_059271932.1|4572590_4574045_-|tRNA	cysteine--tRNA ligase	tRNA	A0A2K9L6B7	Tupanvirus	29.7	1.6e-36
>prophage 318
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4577567	4579151	6226215		Moraxella_phage(100.0%)	1	NA	NA
WP_059271936.1|4577567_4579151_-	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	41.2	9.4e-35
>prophage 319
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4594761	4595583	6226215		Bacillus_virus(100.0%)	1	NA	NA
WP_059271954.1|4594761_4595583_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	29.4	3.4e-28
>prophage 320
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4599218	4599773	6226215		Lactobacillus_phage(100.0%)	1	NA	NA
WP_049072898.1|4599218_4599773_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	31.8	1.3e-15
>prophage 321
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4610809	4613410	6226215		Indivirus(100.0%)	1	NA	NA
WP_068951865.1|4610809_4613410_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	20.0	3.0e-22
>prophage 322
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4618838	4619693	6226215		Rhodococcus_phage(100.0%)	1	NA	NA
WP_049072879.1|4618838_4619693_+	neutral zinc metallopeptidase	NA	A0A1I9SA48	Rhodococcus_phage	39.6	9.2e-37
>prophage 323
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4630002	4632288	6226215		Streptococcus_phage(50.0%)	3	NA	NA
WP_059271989.1|4630002_4631226_+	DUF3440 domain-containing protein	NA	A0A220GKF8	Streptococcus_phage	32.5	1.0e-52
WP_156430350.1|4631222_4631768_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_059271991.1|4631652_4632288_+	ParB N-terminal domain-containing protein	NA	A0A0F7L444	uncultured_marine_virus	53.0	7.3e-55
>prophage 324
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4641312	4644588	6226215		Ectocarpus_siliculosus_virus(100.0%)	1	NA	NA
WP_059272006.1|4641312_4644588_+	hybrid sensor histidine kinase/response regulator	NA	Q8QKV7	Ectocarpus_siliculosus_virus	26.8	1.1e-34
>prophage 325
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4667009	4668497	6226215		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_059272032.1|4667009_4668497_-	chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	38.2	8.9e-11
>prophage 326
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4686214	4688326	6226215		Indivirus(100.0%)	1	NA	NA
WP_059273057.1|4686214_4688326_-	ATP-binding cassette domain-containing protein	NA	A0A1V0SE00	Indivirus	27.5	5.4e-22
>prophage 327
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4695792	4696665	6226215		Synechococcus_phage(100.0%)	1	NA	NA
WP_049072832.1|4695792_4696665_+	NAD(P)-dependent oxidoreductase	NA	V5UT40	Synechococcus_phage	23.1	1.9e-05
>prophage 328
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4707130	4713712	6226215		uncultured_Mediterranean_phage(33.33%)	7	NA	NA
WP_059273059.1|4707130_4708471_+	trypsin-like peptidase domain-containing protein	NA	A0A1B1IRD3	uncultured_Mediterranean_phage	35.0	3.0e-10
WP_049072821.1|4708593_4709856_+	arsenic transporter	NA	A0A2H4J144	uncultured_Caudovirales_phage	28.7	1.5e-22
WP_100508524.1|4709955_4710501_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_054417701.1|4710603_4711296_-	cytochrome c biogenesis protein CcdA	NA	NA	NA	NA	NA
WP_155755589.1|4711478_4711640_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049072819.1|4711648_4712386_+	response regulator	NA	NA	NA	NA	NA
WP_054417699.1|4712386_4713712_+	HAMP domain-containing protein	NA	W8CYF6	Bacillus_phage	27.8	1.4e-15
>prophage 329
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4717491	4719500	6226215		Anomala_cuprea_entomopoxvirus(50.0%)	2	NA	NA
WP_049072814.1|4717491_4718475_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	21.4	2.4e-12
WP_059273060.1|4718489_4719500_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.8	3.9e-10
>prophage 330
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4735404	4735992	6226215		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_059272089.1|4735404_4735992_-	GrpB family protein	NA	A0A2K5B2B6	Erysipelothrix_phage	32.1	1.2e-08
>prophage 331
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4743848	4744604	6226215		Planktothrix_phage(100.0%)	1	NA	NA
WP_054503318.1|4743848_4744604_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.3	2.8e-29
>prophage 332
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4760453	4763021	6226215		Klosneuvirus(50.0%)	2	NA	NA
WP_059272117.1|4760453_4761722_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	25.2	3.9e-15
WP_059272120.1|4761836_4763021_+	8-amino-7-oxononanoate synthase	NA	V5LQ39	Emiliania_huxleyi_virus	27.1	1.9e-19
>prophage 333
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4768725	4772210	6226215		Burkholderia_virus(50.0%)	3	NA	NA
WP_054416396.1|4768725_4769628_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.9	2.4e-19
WP_020929020.1|4769743_4771063_-	isocitrate lyase	NA	NA	NA	NA	NA
WP_059273064.1|4771385_4772210_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	38.4	4.0e-45
>prophage 334
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4791882	4794516	6226215		Bacillus_virus(50.0%)	4	NA	NA
WP_059272141.1|4791882_4792569_-	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	34.7	7.9e-23
WP_059272143.1|4792565_4793249_-	molybdate ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_059272145.1|4793280_4794039_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_059272148.1|4794165_4794516_-	adenosylmethionine decarboxylase	NA	A0A0K0KVU9	Prochlorococcus_phage	38.5	6.0e-11
>prophage 335
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4797737	4799249	6226215		Heterosigma_akashiwo_virus(100.0%)	1	NA	NA
WP_054416382.1|4797737_4799249_+	polyamine aminopropyltransferase	NA	A0A1C9C533	Heterosigma_akashiwo_virus	30.6	8.7e-14
>prophage 336
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4803116	4803911	6226215		Indivirus(100.0%)	1	NA	NA
WP_026384195.1|4803116_4803911_-	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	24.5	3.0e-05
>prophage 337
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4808527	4810069	6226215		Staphylococcus_phage(100.0%)	1	NA	NA
WP_059272162.1|4808527_4810069_-	malonyl-CoA synthase	NA	A0A2H4PQM9	Staphylococcus_phage	25.8	2.0e-26
>prophage 338
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4823921	4825469	6226215		Staphylococcus_phage(100.0%)	1	NA	NA
WP_059272175.1|4823921_4825469_+	xylose ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.4	3.2e-11
>prophage 339
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4830225	4831518	6226215		Bacillus_virus(100.0%)	1	NA	NA
WP_054416361.1|4830225_4831518_-	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	9.1e-28
>prophage 340
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4840925	4854864	6226215	tRNA	Bacillus_virus(20.0%)	13	NA	NA
WP_049072693.1|4840925_4841690_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	25.5	1.8e-12
WP_059273066.1|4841697_4843482_-	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	25.4	2.8e-19
WP_059272188.1|4843521_4844394_-	phosphonopyruvate hydrolase	NA	NA	NA	NA	NA
WP_059272196.1|4844488_4845037_-	hemerythrin domain-containing protein	NA	NA	NA	NA	NA
WP_081330321.1|4845048_4846209_-	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.0	1.9e-64
WP_141702414.1|4846282_4846624_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049072689.1|4846607_4847066_+	HU family DNA-binding protein	NA	NA	NA	NA	NA
WP_049072687.1|4847246_4847759_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_049072686.1|4847793_4849008_+	MFS transporter	NA	NA	NA	NA	NA
WP_059272198.1|4849094_4851752_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	39.8	2.6e-178
WP_054416354.1|4851763_4852426_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049072683.1|4852429_4853488_+	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_059272204.1|4853583_4854864_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	47.3	1.5e-86
>prophage 341
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4859235	4860648	6226215		Mycobacterium_phage(100.0%)	1	NA	NA
WP_082707209.1|4859235_4860648_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	30.5	9.2e-34
>prophage 342
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4879950	4880646	6226215		Achromobacter_phage(100.0%)	1	NA	NA
WP_059272222.1|4879950_4880646_-	hypothetical protein	NA	A0A0K2FIE8	Achromobacter_phage	64.9	3.1e-35
>prophage 343
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4888667	4893165	6226215		Bacillus_virus(33.33%)	6	NA	NA
WP_059272232.1|4888667_4889717_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.6	2.3e-29
WP_054418645.1|4889713_4890562_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_054418647.1|4890558_4891350_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_059272234.1|4891389_4892403_+	proline racemase family protein	NA	NA	NA	NA	NA
WP_059272236.1|4892491_4892833_-	putative addiction module antidote protein	NA	A0A141GEX5	Brucella_phage	52.6	1.3e-05
WP_059272238.1|4892829_4893165_-	addiction module killer protein	NA	A4JWV2	Burkholderia_virus	48.8	2.1e-13
>prophage 344
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4908269	4908839	6226215		Sinorhizobium_phage(100.0%)	1	NA	NA
WP_049075353.1|4908269_4908839_+	sigma-70 family RNA polymerase sigma factor	NA	A0A0F6TH34	Sinorhizobium_phage	26.6	2.8e-05
>prophage 345
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4913032	4920483	6226215		Burkholderia_virus(33.33%)	6	NA	NA
WP_059272253.1|4913032_4914571_-	glycine betaine/L-proline transporter ProP	NA	Q6JIH2	Burkholderia_virus	31.5	5.7e-53
WP_059272254.1|4915085_4916441_+	aromatic acid/H+ symport family MFS transporter	NA	NA	NA	NA	NA
WP_006385463.1|4916583_4917360_-	phosphate ABC transporter ATP-binding protein PstB	NA	W8CYL7	Bacillus_phage	32.1	1.2e-14
WP_080977466.1|4917407_4918262_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_049075365.1|4918285_4919302_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_059272255.1|4919442_4920483_-	phosphate ABC transporter substrate-binding protein PstS	NA	E3SKK5	Synechococcus_phage	39.5	3.6e-51
>prophage 346
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4926360	4930463	6226215	protease	Streptococcus_phage(33.33%)	3	NA	NA
WP_059272256.1|4926360_4927704_-	phosphoglucosamine mutase	NA	A0A1X9I671	Streptococcus_phage	24.0	9.8e-09
WP_054418683.1|4927700_4928546_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	33.7	1.4e-29
WP_049075378.1|4928564_4930463_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	M4QMW8	Micromonas_pusilla_virus	41.8	6.7e-112
>prophage 347
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4935023	4936334	6226215		Enterobacteria_phage(100.0%)	1	NA	NA
WP_059272260.1|4935023_4936334_-	pyrimidine utilization transport protein G	NA	Q9KX94	Enterobacteria_phage	67.4	4.1e-153
>prophage 348
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4940169	4944750	6226215		Planktothrix_phage(50.0%)	5	NA	NA
WP_059272263.1|4940169_4941255_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.9	3.8e-27
WP_006385483.1|4941279_4942188_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_054418700.1|4942237_4942882_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_059272265.1|4942990_4943764_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_059272267.1|4943853_4944750_-	lipid A hydroxylase LpxO	NA	H8ZJK8	Ostreococcus_tauri_virus	39.8	4.1e-35
>prophage 349
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4948051	4956609	6226215		Halovirus(25.0%)	9	NA	NA
WP_049075395.1|4948051_4949206_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	33.3	8.9e-51
WP_049077998.1|4949428_4950382_+	transaldolase	NA	A0A0C5AMY8	Cyanophage	33.8	1.1e-09
WP_059272269.1|4950406_4950934_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_059272271.1|4951100_4953308_+	GAF domain-containing protein	NA	A0A1B0VMK3	Pseudomonas_phage	31.6	3.2e-25
WP_020926775.1|4953304_4953670_+	response regulator	NA	NA	NA	NA	NA
WP_059272273.1|4953677_4954328_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059272275.1|4954324_4954906_+	biliverdin-producing heme oxygenase	NA	NA	NA	NA	NA
WP_049075402.1|4954949_4955744_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_049075403.1|4955796_4956609_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.7	2.7e-30
>prophage 350
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4960056	4962369	6226215		Streptococcus_virus(100.0%)	1	NA	NA
WP_059272279.1|4960056_4962369_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	36.6	5.0e-45
>prophage 351
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4982316	4988741	6226215	tRNA	Tupanvirus(25.0%)	6	NA	NA
WP_049075429.1|4982316_4983345_+	alcohol dehydrogenase AdhP	NA	A0A2K9L339	Tupanvirus	27.3	1.0e-34
WP_059272295.1|4983506_4984085_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_054501069.1|4984294_4984783_-|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_054417189.1|4984849_4985833_-	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	32.3	3.8e-26
WP_059272296.1|4985967_4986879_-	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	28.4	1.6e-18
WP_049075439.1|4987058_4988741_+	thiamine pyrophosphate-binding protein	NA	E5ERI2	Ostreococcus_lucimarinus_virus	23.3	4.5e-27
>prophage 352
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	4993590	4997005	6226215		Achromobacter_phage(100.0%)	2	NA	NA
WP_059272298.1|4993590_4995243_-	hypothetical protein	NA	A0A0B5A596	Achromobacter_phage	45.8	5.4e-41
WP_059272300.1|4995382_4997005_-	hypothetical protein	NA	A0A0B5A509	Achromobacter_phage	53.3	3.1e-49
>prophage 353
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5004292	5005852	6226215		Tupanvirus(100.0%)	1	NA	NA
WP_059272305.1|5004292_5005852_+	benzoate-CoA ligase family protein	NA	A0A2K9L3I8	Tupanvirus	23.9	5.6e-16
>prophage 354
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5009815	5013826	6226215		Brazilian_cedratvirus(33.33%)	4	NA	NA
WP_059272320.1|5009815_5010589_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	28.2	2.2e-13
WP_059272322.1|5010576_5011287_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.7	9.7e-08
WP_049075461.1|5011326_5012883_-	acetolactate synthase large subunit	NA	NA	NA	NA	NA
WP_059272324.1|5013073_5013826_-	amino acid ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	29.3	5.8e-19
>prophage 355
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5017750	5018773	6226215		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_006385546.1|5017750_5018773_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	40.4	8.4e-69
>prophage 356
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5022371	5027085	6226215		Pandoravirus(33.33%)	6	NA	NA
WP_059272335.1|5022371_5023418_-	threonylcarbamoyl-AMP synthase	NA	S4VW33	Pandoravirus	38.4	1.3e-40
WP_059272336.1|5023422_5024613_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_049075481.1|5024618_5025140_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.6	1.1e-16
WP_059272338.1|5025214_5025787_-	disulfide bond formation protein B	NA	NA	NA	NA	NA
WP_006390808.1|5025797_5025956_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049075485.1|5026203_5027085_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0M4JBD3	Mollivirus	36.4	1.2e-50
>prophage 357
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5030553	5032152	6226215		Bacillus_virus(100.0%)	1	NA	NA
WP_059272345.1|5030553_5032152_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.2	1.3e-15
>prophage 358
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5043377	5044873	6226215		Planktothrix_phage(50.0%)	2	NA	NA
WP_059272362.1|5043377_5044094_-	phosphonate C-P lyase system protein PhnL	NA	G9BWD6	Planktothrix_phage	33.0	4.7e-18
WP_059272363.1|5044096_5044873_-	phosphonate C-P lyase system protein PhnK	NA	G3M9Y6	Bacillus_virus	24.0	2.9e-13
>prophage 359
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5057875	5062555	6226215		Cedratvirus(50.0%)	7	NA	NA
WP_059272372.1|5057875_5058718_-	phosphonate ABC transporter ATP-binding protein	NA	A0A285PWH2	Cedratvirus	27.3	9.8e-07
WP_049075536.1|5058915_5059347_+	GFA family protein	NA	NA	NA	NA	NA
WP_059272374.1|5059412_5059778_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_049075540.1|5059770_5060310_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_059272376.1|5060926_5061193_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_049075544.1|5061354_5061657_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059272382.1|5061670_5062555_-	peptidoglycan DD-metalloendopeptidase family protein	NA	I2E8W3	Clostridium_phage	38.0	1.4e-16
>prophage 360
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5068476	5069424	6226215		Yellowstone_lake_phycodnavirus(100.0%)	1	NA	NA
WP_049078012.1|5068476_5069424_-	DnaJ domain-containing protein	NA	A0A0P0YNN4	Yellowstone_lake_phycodnavirus	25.4	2.4e-14
>prophage 361
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5098065	5098938	6226215		Bacillus_virus(100.0%)	1	NA	NA
WP_049075596.1|5098065_5098938_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.3	5.0e-30
>prophage 362
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5110520	5115209	6226215	tRNA	uncultured_Mediterranean_phage(100.0%)	4	NA	NA
WP_054417124.1|5110520_5111657_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.8	8.9e-88
WP_006390891.1|5111886_5112228_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.0	1.0e-10
WP_049075615.1|5112341_5114222_+	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_049075617.1|5114273_5115209_+	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.7	1.8e-41
>prophage 363
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5119200	5120226	6226215		Pseudomonas_phage(100.0%)	1	NA	NA
WP_049075624.1|5119200_5120226_+	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	46.6	4.3e-49
>prophage 364
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5131146	5131650	6226215		Pelagibacter_phage(100.0%)	1	NA	NA
WP_049075637.1|5131146_5131650_-	peroxiredoxin	NA	M1I839	Pelagibacter_phage	49.2	6.9e-24
>prophage 365
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5155347	5156274	6226215		Lactobacillus_phage(100.0%)	1	NA	NA
WP_059272416.1|5155347_5156274_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	22.5	2.0e-05
>prophage 366
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5172615	5173128	6226215		Rhizobium_phage(100.0%)	1	NA	NA
WP_059272424.1|5172615_5173128_+	RNA polymerase sigma factor	NA	A0A076YQ50	Rhizobium_phage	26.9	2.5e-05
>prophage 367
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5185066	5186606	6226215		Brazilian_cedratvirus(50.0%)	2	NA	NA
WP_053501205.1|5185066_5185906_+	urea ABC transporter ATP-binding protein UrtD	NA	A0A2R8FG22	Brazilian_cedratvirus	25.0	6.1e-09
WP_020926614.1|5185907_5186606_+	urea ABC transporter ATP-binding subunit UrtE	NA	A0A2H4PQG7	Staphylococcus_phage	24.5	3.4e-13
>prophage 368
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5191018	5192893	6226215		uncultured_Caudovirales_phage(50.0%)	3	NA	NA
WP_049075714.1|5191018_5191447_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	64.3	8.4e-47
WP_054417076.1|5191670_5192276_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_174539046.1|5192341_5192893_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	49.0	1.4e-17
>prophage 369
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5208266	5208959	6226215		Streptococcus_phage(100.0%)	1	NA	NA
WP_059272440.1|5208266_5208959_+	YafY family transcriptional regulator	NA	A0A1B0RXM1	Streptococcus_phage	30.4	3.0e-14
>prophage 370
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5220962	5222566	6226215		Bacillus_phage(50.0%)	2	NA	NA
WP_059272447.1|5220962_5221724_+	amino acid ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	34.7	6.3e-13
WP_169536682.1|5221894_5222566_-	peptidoglycan DD-metalloendopeptidase family protein	NA	I3PV79	Clostridium_phage	37.1	2.3e-11
>prophage 371
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5236007	5238062	6226215		Salmonella_phage(100.0%)	1	NA	NA
WP_059273088.1|5236007_5238062_-	TonB-dependent receptor	NA	A0A1B0VCF0	Salmonella_phage	54.4	8.5e-105
>prophage 372
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5258182	5263000	6226215		Microcystis_phage(33.33%)	7	NA	NA
WP_059272466.1|5258182_5259178_+	formylglycine-generating enzyme family protein	NA	A0A075BSL8	Microcystis_phage	30.7	2.1e-24
WP_049075812.1|5259225_5259609_+	VOC family protein	NA	NA	NA	NA	NA
WP_059272467.1|5259611_5260418_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_059272468.1|5260503_5260872_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_049075817.1|5260879_5261398_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.0	2.3e-14
WP_059272469.1|5261520_5262297_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_049075821.1|5262310_5263000_-	HAD family phosphatase	NA	A0A1D8KNV9	Synechococcus_phage	29.1	1.1e-08
>prophage 373
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5274973	5275867	6226215		Yersinia_phage(100.0%)	1	NA	NA
WP_049075835.1|5274973_5275867_-	band 7 protein	NA	A0A2C9D0H9	Yersinia_phage	49.3	1.6e-44
>prophage 374
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5282834	5283833	6226215		Escherichia_phage(100.0%)	1	NA	NA
WP_006387384.1|5282834_5283833_-	TerC family protein	NA	A0A291LBC5	Escherichia_phage	32.9	1.2e-35
>prophage 375
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5288622	5289666	6226215		Tupanvirus(100.0%)	1	NA	NA
WP_059272483.1|5288622_5289666_+	histone deacetylase family protein	NA	A0A2K9L4C2	Tupanvirus	42.4	5.8e-41
>prophage 376
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5313153	5313966	6226215		Escherichia_phage(100.0%)	1	NA	NA
WP_059272492.1|5313153_5313966_+	metallophosphoesterase	NA	A0A097EY44	Escherichia_phage	29.6	5.9e-17
>prophage 377
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5334317	5335632	6226215	protease	uncultured_Caudovirales_phage(50.0%)	3	NA	NA
WP_049075922.1|5334317_5334632_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4J145	uncultured_Caudovirales_phage	42.6	1.8e-06
WP_054415239.1|5334628_5334988_+	polyketide cyclase	NA	NA	NA	NA	NA
WP_049075926.1|5335026_5335632_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	52.5	4.1e-55
>prophage 378
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5341669	5343988	6226215		Escherichia_phage(100.0%)	1	NA	NA
WP_059272506.1|5341669_5343988_+	molybdopterin-dependent oxidoreductase	NA	A0A077SK27	Escherichia_phage	30.1	1.4e-74
>prophage 379
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5358722	5362198	6226215		Bacillus_phage(100.0%)	2	NA	NA
WP_059272516.1|5358722_5360459_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	4.5e-22
WP_059272517.1|5360455_5362198_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.2	1.5e-25
>prophage 380
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5365335	5370721	6226215		uncultured_Caudovirales_phage(66.67%)	6	NA	NA
WP_049075969.1|5365335_5366940_-	ATP-dependent DNA ligase	NA	A0A291AUV6	Sinorhizobium_phage	36.0	2.9e-15
WP_049075971.1|5366988_5367993_-	ligase-associated DNA damage response exonuclease	NA	NA	NA	NA	NA
WP_054415188.1|5368116_5368440_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_054415186.1|5368453_5369524_+	ACR3 family arsenite efflux transporter	NA	NA	NA	NA	NA
WP_054415184.1|5369580_5370003_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	73.6	9.1e-54
WP_059272520.1|5369995_5370721_+	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	65.4	5.5e-83
>prophage 381
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5385265	5391303	6226215		Hokovirus(50.0%)	4	NA	NA
WP_059272530.1|5385265_5388670_+	response regulator	NA	A0A1V0SGX0	Hokovirus	40.1	2.2e-33
WP_049076006.1|5388699_5389545_+	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA	NA
WP_059272531.1|5389541_5390147_+	chemotaxis protein CheB	NA	NA	NA	NA	NA
WP_059272532.1|5390166_5391303_+	hybrid sensor histidine kinase/response regulator	NA	A0A1B0VMK3	Pseudomonas_phage	37.8	6.1e-36
>prophage 382
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5406555	5410309	6226215		Bacillus_phage(50.0%)	4	NA	NA
WP_082707275.1|5406555_5407878_-	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	23.8	1.0e-05
WP_049076044.1|5408009_5408378_+	VOC family protein	NA	NA	NA	NA	NA
WP_059272545.1|5408465_5409371_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_049076049.1|5409559_5410309_+	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	32.9	3.1e-20
>prophage 383
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5423052	5425018	6226215		uncultured_virus(100.0%)	2	NA	NA
WP_006385977.1|5423052_5423340_+	co-chaperone GroES	NA	A0A221S4A8	uncultured_virus	53.2	1.4e-21
WP_006385976.1|5423377_5425018_+	chaperonin GroEL	NA	A0A240F779	uncultured_virus	58.8	1.6e-167
>prophage 384
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5434992	5445665	6226215		Cedratvirus(16.67%)	12	NA	NA
WP_059272558.1|5434992_5435772_+	ABC transporter ATP-binding protein	NA	A0A285PWH2	Cedratvirus	27.1	4.2e-12
WP_059272559.1|5435768_5436479_+	ABC transporter ATP-binding protein	NA	F2Y302	Organic_Lake_phycodnavirus	26.3	3.3e-08
WP_059272560.1|5436504_5438133_-	mannitol dehydrogenase family protein	NA	G9E6E2	Micromonas_pusilla_virus	28.9	5.8e-40
WP_006385962.1|5438401_5438800_+	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_059272561.1|5438853_5440173_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_049076107.1|5440181_5441000_+	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA	NA
WP_059272562.1|5441069_5441636_-	CinA family protein	NA	B5TK85	Pseudomonas_phage	43.9	1.6e-21
WP_049076110.1|5441632_5442139_-	phosphatidylglycerophosphatase A	NA	NA	NA	NA	NA
WP_059272563.1|5442284_5443250_-	thiamine-phosphate kinase	NA	NA	NA	NA	NA
WP_049076116.1|5443488_5443980_-	transcription antitermination factor NusB	NA	NA	NA	NA	NA
WP_006391339.1|5443948_5444479_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2I2L4Y7	Orpheovirus	32.0	1.3e-09
WP_049076118.1|5444489_5445665_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	M4QPK3	Synechococcus_phage	41.4	4.1e-35
>prophage 385
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5448671	5449442	6226215		Bacillus_phage(100.0%)	1	NA	NA
WP_049076126.1|5448671_5449442_+	phosphonate ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	37.2	1.6e-16
>prophage 386
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5455360	5456292	6226215		uncultured_Mediterranean_phage(100.0%)	2	NA	NA
WP_006385942.1|5455360_5455864_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.8	2.4e-29
WP_049076136.1|5456040_5456292_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	52.3	2.1e-18
>prophage 387
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5463729	5465382	6226215		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_059272568.1|5463729_5465382_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2I4R674	Erysipelothrix_phage	33.9	1.8e-25
>prophage 388
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5471365	5472316	6226215		Tupanvirus(100.0%)	1	NA	NA
WP_006227587.1|5471365_5472316_-	ribose-phosphate pyrophosphokinase	NA	A0A2K9L8D8	Tupanvirus	35.8	2.5e-43
>prophage 389
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5500050	5501442	6226215		Bacillus_phage(100.0%)	1	NA	NA
WP_059272580.1|5500050_5501442_+	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	30.6	1.7e-48
>prophage 390
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5508172	5513674	6226215		Micromonas_pusilla_virus(50.0%)	4	NA	NA
WP_059272584.1|5508172_5510104_-	asparagine synthase (glutamine-hydrolyzing)	NA	G8DDK6	Micromonas_pusilla_virus	30.0	4.2e-29
WP_059272585.1|5510151_5511297_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_059272586.1|5511297_5512647_-	polysaccharide biosynthesis C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_049076206.1|5512648_5513674_-	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	NA	A0A2K9L4U8	Tupanvirus	46.1	3.8e-77
>prophage 391
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5518252	5523796	6226215		Geobacillus_virus(25.0%)	4	NA	NA
WP_059272588.1|5518252_5519224_+	thymidylate synthase	NA	A6M9A2	Geobacillus_virus	36.8	9.8e-51
WP_049076216.1|5519610_5521674_+	bifunctional diguanylate cyclase/phosphodiesterase	NA	G3MA91	Bacillus_virus	36.7	6.3e-23
WP_054415457.1|5521817_5522303_+	dihydrofolate reductase	NA	A0A0S2MU93	Bacillus_phage	38.9	5.4e-26
WP_059272589.1|5522377_5523796_-	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	22.6	4.2e-18
>prophage 392
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5532003	5533689	6226215		Bodo_saltans_virus(100.0%)	1	NA	NA
WP_054414979.1|5532003_5533689_+	ABC transporter ATP-binding protein	NA	A0A2H4UUX5	Bodo_saltans_virus	19.9	8.8e-07
>prophage 393
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5538948	5545437	6226215		Prochlorococcus_phage(50.0%)	5	NA	NA
WP_059272596.1|5538948_5541822_-	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.3	1.3e-257
WP_006385867.1|5541914_5542292_-	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_054500649.1|5542388_5543489_-	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_049076242.1|5543901_5544795_-	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_059272597.1|5544822_5545437_-	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	72.5	1.0e-82
>prophage 394
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5552861	5553425	6226215		Pseudomonas_phage(100.0%)	1	NA	NA
WP_006226186.1|5552861_5553425_-	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	70.8	7.6e-72
>prophage 395
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5560949	5566931	6226215	tRNA	Klosneuvirus(50.0%)	5	NA	NA
WP_059272600.1|5560949_5563016_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	24.9	3.2e-27
WP_059273106.1|5563101_5563839_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_059272601.1|5563939_5564734_-	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_049076264.1|5564947_5565478_-	META domain-containing protein	NA	NA	NA	NA	NA
WP_049076265.1|5565725_5566931_+	acyltransferase	NA	Q9MC93	Pseudomonas_phage	26.7	9.7e-08
>prophage 396
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5578781	5581535	6226215		Staphylococcus_phage(100.0%)	1	NA	NA
WP_059272607.1|5578781_5581535_+	ribosome-associated ATPase/putative transporter RbbA	NA	A0A2H4PQG7	Staphylococcus_phage	27.7	3.9e-20
>prophage 397
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5588722	5591432	6226215		Catovirus(33.33%)	3	NA	NA
WP_059272613.1|5588722_5589952_-	acetamidase/formamidase family protein	NA	A0A1V0S8X7	Catovirus	58.4	2.8e-135
WP_059272614.1|5589981_5590674_-	urea ABC transporter ATP-binding subunit UrtE	NA	A0A2H4PQG7	Staphylococcus_phage	26.3	1.0e-14
WP_059272615.1|5590688_5591432_-	urea ABC transporter ATP-binding protein UrtD	NA	G9BWD6	Planktothrix_phage	26.1	6.6e-15
>prophage 398
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5594991	5599261	6226215		Ectocarpus_siliculosus_virus(50.0%)	2	NA	NA
WP_059272616.1|5594991_5598384_+	response regulator	NA	Q8QKV7	Ectocarpus_siliculosus_virus	28.5	2.1e-31
WP_054500607.1|5598352_5599261_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	36.8	2.5e-16
>prophage 399
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5609036	5610344	6226215		Burkholderia_virus(100.0%)	1	NA	NA
WP_059272625.1|5609036_5610344_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	41.1	4.8e-85
>prophage 400
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5629115	5631557	6226215		Bacillus_phage(100.0%)	2	NA	NA
WP_059272635.1|5629115_5630423_-	sensor histidine kinase	NA	W8CYF6	Bacillus_phage	24.5	4.6e-11
WP_054414899.1|5630780_5631557_-	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	49.3	8.7e-10
>prophage 401
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5646609	5647056	6226215		Bacillus_virus(100.0%)	1	NA	NA
WP_006385755.1|5646609_5647056_+	peptidoglycan-binding protein LysM	NA	G3MBQ1	Bacillus_virus	50.7	1.2e-06
>prophage 402
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5650079	5650658	6226215		Sphingobium_phage(100.0%)	1	NA	NA
WP_054500574.1|5650079_5650658_+	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	A0A1W6DX33	Sphingobium_phage	31.1	1.8e-07
>prophage 403
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5656210	5657245	6226215		Bodo_saltans_virus(100.0%)	1	NA	NA
WP_059272650.1|5656210_5657245_-	NAD-dependent epimerase/dehydratase family protein	NA	A0A2H4UUK0	Bodo_saltans_virus	27.5	3.0e-26
>prophage 404
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5662621	5664544	6226215		Brazilian_cedratvirus(100.0%)	1	NA	NA
WP_059272654.1|5662621_5664544_-	type I secretion system permease/ATPase	NA	A0A2R8FG22	Brazilian_cedratvirus	33.3	6.3e-17
>prophage 405
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5673507	5676940	6226215		Oenococcus_phage(50.0%)	3	NA	NA
WP_006391563.1|5673507_5674656_+	galactonate dehydratase	NA	Q6A202	Oenococcus_phage	37.0	3.3e-58
WP_059272659.1|5674688_5675999_+	MFS transporter	NA	NA	NA	NA	NA
WP_059272660.1|5676229_5676940_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.1	2.8e-07
>prophage 406
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5684355	5737891	6226215	integrase,tail	Burkholderia_virus(26.32%)	51	5689637:5689691	5709423:5709477
WP_059272665.1|5684355_5686245_-	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	37.3	1.2e-118
WP_059272666.1|5686540_5687947_-	DKNYY domain-containing protein	NA	NA	NA	NA	NA
WP_059272667.1|5688096_5689488_+	purine permease	NA	H9YQ34	environmental_Halophage	49.6	3.7e-27
5689637:5689691	attL	GACTCAAAATCCCCCGCCGCAAGGCGTGCCGGTTCGATTCCGGCCCCGGGCACCA	NA	NA	NA	NA
WP_059272668.1|5689825_5690953_+|integrase	site-specific integrase	integrase	A0A1L7DQ84	Ralstonia_phage	36.6	1.1e-48
WP_059272669.1|5691014_5691641_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082707227.1|5692008_5696127_-	HigA family addiction module antidote protein	NA	NA	NA	NA	NA
WP_059272670.1|5696683_5697373_-	metallophosphoesterase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	48.5	6.0e-55
WP_082707228.1|5697796_5698066_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082707229.1|5698062_5699073_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059272671.1|5699069_5699609_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA	NA
WP_082707230.1|5699605_5700601_+	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA	NA
WP_059272673.1|5700605_5700884_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059272674.1|5701140_5701866_+	P-type DNA transfer protein VirB5	NA	NA	NA	NA	NA
WP_059272675.1|5701876_5702323_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059272676.1|5702319_5702580_+	EexN family lipoprotein	NA	NA	NA	NA	NA
WP_059272677.1|5702581_5703634_+	type IV secretion system protein	NA	NA	NA	NA	NA
WP_052097482.1|5704286_5704520_+	antitoxin VbhA family protein	NA	NA	NA	NA	NA
WP_082707231.1|5704601_5705681_+	DUF4297 domain-containing protein	NA	NA	NA	NA	NA
WP_156430361.1|5705755_5707465_+	hypothetical protein	NA	NA	NA	NA	NA
WP_167352802.1|5707586_5709209_+	RNA-directed DNA polymerase	NA	NA	NA	NA	NA
WP_059272678.1|5709528_5709831_-	putative addiction module antidote protein	NA	A4JWV1	Burkholderia_virus	46.1	7.8e-15
5709423:5709477	attR	GACTCAAAATCCCCCGCCGCAAGGCGTGCCGGTTCGATTCCGGCCCCGGGCACCA	NA	NA	NA	NA
WP_059272679.1|5709827_5710136_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A141GEX6	Brucella_phage	47.9	5.3e-19
WP_059272680.1|5710282_5710750_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059272681.1|5710781_5711105_-	YXWGXW repeat-containing protein	NA	NA	NA	NA	NA
WP_059272682.1|5711398_5712415_+	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	39.0	3.0e-66
WP_006385706.1|5712612_5712894_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_059273114.1|5713123_5713864_-	sugar ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	27.8	7.3e-14
WP_054414631.1|5713939_5714899_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_054414627.1|5714913_5715858_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_059272683.1|5716005_5717565_-	FGGY-family carbohydrate kinase	NA	NA	NA	NA	NA
WP_156430362.1|5717650_5719054_-	hypothetical protein	NA	NA	NA	NA	NA
WP_059272685.1|5719356_5720292_+	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA	NA
WP_059272686.1|5720348_5721548_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_059272687.1|5721579_5722398_+	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	50.7	6.4e-11
WP_059272688.1|5722453_5723383_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_059272689.1|5723512_5724109_-|tail	tail assembly protein	tail	Q6JIL3	Burkholderia_virus	53.3	6.6e-50
WP_059272690.1|5724105_5724321_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139122214.1|5724301_5724673_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049076500.1|5728277_5728883_-|tail	tail assembly protein	tail	C7BGD3	Burkholderia_phage	55.7	9.4e-52
WP_059272691.1|5728879_5729659_-	C40 family peptidase	NA	A4JX14	Burkholderia_virus	50.2	1.5e-65
WP_059272692.1|5729661_5730390_-|tail	phage minor tail protein L	tail	A4JX13	Burkholderia_virus	57.4	2.7e-69
WP_059272693.1|5730574_5730913_-|tail	phage tail protein	tail	K7P7R1	Enterobacteria_phage	50.0	5.3e-28
WP_059272694.1|5730915_5732217_-|tail	phage tail tape measure protein	tail	A0A1W6JP49	Morganella_phage	30.1	9.8e-14
WP_049076506.1|5732274_5732565_-	DUF4035 domain-containing protein	NA	S4TND7	Salmonella_phage	48.8	5.3e-13
WP_049076508.1|5732564_5733038_-|tail	tail protein	tail	A4JX08	Burkholderia_virus	43.5	1.8e-26
WP_049076510.1|5733043_5733511_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054415419.1|5733762_5734332_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049076513.1|5734629_5735328_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_059272695.1|5735422_5736892_-	DUF1254 domain-containing protein	NA	M1IA53	Paramecium_bursaria_Chlorella_virus	33.3	2.4e-56
WP_054414595.1|5737106_5737655_-	ureidoglycolate lyase	NA	NA	NA	NA	NA
WP_054414593.1|5737651_5737891_-	DUF3596 domain-containing protein	NA	A0A1W6JTA0	Pseudomonas_phage	55.3	1.8e-11
>prophage 407
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5750458	5751337	6226215		Lactobacillus_phage(100.0%)	1	NA	NA
WP_059272699.1|5750458_5751337_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	20.3	5.1e-06
>prophage 408
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5761605	5762694	6226215		Bacillus_virus(100.0%)	1	NA	NA
WP_049078166.1|5761605_5762694_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.6	6.2e-30
>prophage 409
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5771485	5774701	6226215		Leptospira_phage(100.0%)	1	NA	NA
WP_059272706.1|5771485_5774701_+	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	23.4	3.2e-05
>prophage 410
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5783077	5786776	6226215		Cedratvirus(50.0%)	4	NA	NA
WP_059272715.1|5783077_5783638_+	5'-3'-deoxyribonucleotidase	NA	A0A2R8FD87	Cedratvirus	32.3	2.4e-09
WP_054419386.1|5783742_5785080_+	flagellar biosynthesis protein FlgA	NA	NA	NA	NA	NA
WP_049076565.1|5785133_5785886_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_049076567.1|5786038_5786776_-	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	30.2	1.0e-12
>prophage 411
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5791450	5793736	6226215		Bacillus_virus(33.33%)	3	NA	NA
WP_026385191.1|5791450_5792203_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	24.4	4.9e-10
WP_059272719.1|5792199_5792919_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	21.1	1.1e-11
WP_059272720.1|5792947_5793736_+	3-oxoacyl-ACP reductase FabG	NA	W8CYX9	Bacillus_phage	42.5	2.0e-06
>prophage 412
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5797747	5799145	6226215		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_059272724.1|5797747_5799145_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	24.3	6.3e-27
>prophage 413
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5809272	5809986	6226215		Vibrio_phage(100.0%)	1	NA	NA
WP_049076594.1|5809272_5809986_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A1B0Z0B4	Vibrio_phage	42.9	8.7e-49
>prophage 414
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5829304	5832293	6226215		Bacillus_virus(25.0%)	4	NA	NA
WP_059272732.1|5829304_5830069_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.9	5.7e-14
WP_054417914.1|5830061_5830781_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.1	9.5e-11
WP_059272733.1|5830791_5831544_+	SDR family oxidoreductase	NA	A0A0N9R355	Chrysochromulina_ericina_virus	24.8	8.4e-10
WP_059272734.1|5831552_5832293_+	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	37.5	9.5e-06
>prophage 415
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5846588	5848094	6226215		Staphylococcus_phage(100.0%)	1	NA	NA
WP_059272741.1|5846588_5848094_+	AMP-binding protein	NA	A0A2H4PQM9	Staphylococcus_phage	26.4	7.3e-29
>prophage 416
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5854399	5855482	6226215		Pseudomonas_phage(100.0%)	1	NA	NA
WP_049076675.1|5854399_5855482_-	peptide chain release factor 1	NA	W8EDB3	Pseudomonas_phage	35.8	7.4e-07
>prophage 417
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5865828	5873657	6226215		Escherichia_phage(60.0%)	8	NA	NA
WP_059272749.1|5865828_5867160_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	36.7	5.6e-73
WP_049076700.1|5867348_5868257_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_059272750.1|5868306_5869014_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_059272751.1|5869060_5870323_-	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	48.8	6.9e-89
WP_049076707.1|5870319_5871225_-	NAD-binding protein	NA	A0A077SLF7	Escherichia_phage	58.3	6.7e-78
WP_059272752.1|5871221_5872199_-	SDR family oxidoreductase	NA	A0A2C9DSV6	Western_grey_kangaroopox_virus	35.8	1.6e-08
WP_059272753.1|5872195_5872987_-	hydroxypyruvate isomerase family protein	NA	NA	NA	NA	NA
WP_054417886.1|5873018_5873657_-	aldolase	NA	A0A077SK32	Escherichia_phage	45.9	4.0e-37
>prophage 418
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5882707	5885139	6226215		Hepacivirus(50.0%)	2	NA	NA
WP_059272762.1|5882707_5884228_+	acyl--CoA ligase	NA	Q75ZG1	Hepacivirus	27.1	4.5e-34
WP_059272763.1|5884254_5885139_+	SDR family NAD(P)-dependent oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	31.2	3.1e-11
>prophage 419
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5891723	5892860	6226215		Streptococcus_phage(100.0%)	1	NA	NA
WP_049076734.1|5891723_5892860_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	43.6	4.2e-61
>prophage 420
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5901635	5903081	6226215		Moraxella_phage(100.0%)	1	NA	NA
WP_049076753.1|5901635_5903081_-	S41 family peptidase	NA	A0A0R6PIZ1	Moraxella_phage	26.4	4.6e-20
>prophage 421
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5906114	5906372	6226215		Rhizobium_phage(100.0%)	1	NA	NA
WP_006391755.1|5906114_5906372_+	glutaredoxin 3	NA	V9QKN6	Rhizobium_phage	50.6	7.8e-16
>prophage 422
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5927413	5934393	6226215	tRNA	Prochlorococcus_phage(20.0%)	7	NA	NA
WP_049076816.1|5927413_5928355_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	34.2	9.9e-08
WP_006389914.1|5928384_5928897_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	43.3	1.9e-21
WP_059272777.1|5929154_5930270_+	DNA-protecting protein DprA	NA	S6BFL3	Thermus_phage	35.0	9.2e-21
WP_049076821.1|5930419_5931328_+	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA	NA
WP_049076822.1|5931424_5931898_+	membrane protein	NA	NA	NA	NA	NA
WP_054417858.1|5932007_5933024_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	43.6	3.5e-75
WP_054417857.1|5933151_5934393_-	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	25.3	9.0e-17
>prophage 423
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5947271	5952232	6226215		Lactobacillus_phage(25.0%)	4	NA	NA
WP_059272782.1|5947271_5948162_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	22.1	4.3e-05
WP_006391794.1|5948180_5948732_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	45.1	2.9e-31
WP_059272783.1|5948786_5950484_-	thiol reductant ABC exporter subunit CydC	NA	F2Y1V6	Organic_Lake_phycodnavirus	26.1	3.5e-11
WP_059272784.1|5950480_5952232_-	thiol reductant ABC exporter subunit CydD	NA	A0A2R8FG22	Brazilian_cedratvirus	31.4	6.5e-13
>prophage 424
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5957379	5961107	6226215		Tetraselmis_virus(33.33%)	5	NA	NA
WP_049076864.1|5957379_5958369_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	38.4	1.3e-39
WP_080977522.1|5958365_5958974_+	HAD hydrolase family protein	NA	E3T535	Cafeteria_roenbergensis_virus	26.8	9.8e-09
WP_054419996.1|5959005_5959638_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_049076870.1|5959634_5960279_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_049076872.1|5960312_5961107_+	LPS export ABC transporter ATP-binding protein	NA	A0A1M7XV31	Cedratvirus	28.4	8.3e-16
>prophage 425
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5967152	5971708	6226215		Corynebacterium_phage(25.0%)	6	NA	NA
WP_049078186.1|5967152_5968025_+	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	33.9	4.9e-09
WP_059272789.1|5968021_5968978_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	48.3	2.2e-15
WP_059272790.1|5968993_5969608_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	46.0	1.2e-30
WP_049076886.1|5969612_5970542_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	NA	NA	NA	NA
WP_049076889.1|5970610_5971084_+	YraN family protein	NA	NA	NA	NA	NA
WP_006389868.1|5971114_5971708_+	phosphoheptose isomerase	NA	A0A067XQR2	Caulobacter_phage	29.1	1.4e-15
>prophage 426
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5991105	5991894	6226215		Streptococcus_phage(100.0%)	1	NA	NA
WP_049076940.1|5991105_5991894_+	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	28.5	4.7e-19
>prophage 427
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	5999966	6007211	6226215		Acanthocystis_turfacea_Chlorella_virus(33.33%)	6	NA	NA
WP_059272798.1|5999966_6001892_+	branched-chain amino acid ABC transporter ATP-binding protein/permease	NA	M1HXU1	Acanthocystis_turfacea_Chlorella_virus	24.0	4.5e-07
WP_047992089.1|6001908_6002631_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.1	2.9e-15
WP_024070675.1|6003110_6003539_-	organic hydroperoxide resistance protein	NA	NA	NA	NA	NA
WP_049076957.1|6003694_6004156_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_054419840.1|6004358_6005066_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_059272799.1|6005234_6007211_+	AMP-binding protein	NA	A0A1V0SBX8	Catovirus	22.9	3.3e-37
>prophage 428
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	6011766	6012609	6226215		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_049076966.1|6011766_6012609_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.0	3.1e-13
>prophage 429
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	6021661	6022885	6226215		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_059272804.1|6021661_6022885_+	Na+/H+ antiporter NhaA	NA	A0A2H4J5W3	uncultured_Caudovirales_phage	61.1	4.9e-108
>prophage 430
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	6026687	6027473	6226215		Trichoplusia_ni_ascovirus(100.0%)	1	NA	NA
WP_049076994.1|6026687_6027473_+	3-hydroxybutyrate dehydrogenase	NA	Q06VL0	Trichoplusia_ni_ascovirus	26.6	2.7e-06
>prophage 431
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	6040915	6048177	6226215	tRNA	Beluga_whale_alphaherpesvirus(25.0%)	5	NA	NA
WP_059272809.1|6040915_6041677_+	uracil-DNA glycosylase	NA	A0A286RUF9	Beluga_whale_alphaherpesvirus	45.7	4.3e-46
WP_059272810.1|6041954_6043730_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	35.4	2.0e-57
WP_059272811.1|6043816_6044998_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_059272812.1|6045007_6046111_-|tRNA	tRNA CCA-pyrophosphorylase	tRNA	A0A0F6YPT7	Sinorhizobium_phage	52.9	4.8e-54
WP_156430409.1|6046107_6048177_-	transglycosylase SLT domain-containing protein	NA	A0A0S2SXL7	Bacillus_phage	37.2	2.0e-13
>prophage 432
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	6056470	6057889	6226215		Pandoravirus(100.0%)	1	NA	NA
WP_049077027.1|6056470_6057889_-	adenosylhomocysteinase	NA	S4VPF6	Pandoravirus	29.6	3.3e-39
>prophage 433
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	6069519	6081944	6226215		Bacillus_virus(20.0%)	10	NA	NA
WP_059272823.1|6069519_6072009_+	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	28.4	4.3e-10
WP_049077052.1|6072063_6073074_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_026382075.1|6073150_6074455_+	MFS transporter	NA	Q6JIH2	Burkholderia_virus	35.5	1.2e-59
WP_059272824.1|6074554_6075982_+	amidase	NA	NA	NA	NA	NA
WP_049077057.1|6076047_6077211_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	62.6	2.2e-129
WP_059272825.1|6077487_6078354_+	lysophospholipid acyltransferase family protein	NA	NA	NA	NA	NA
WP_049077062.1|6078398_6079289_+	lysophospholipid acyltransferase family protein	NA	A0A1W6JP29	Morganella_phage	30.8	2.4e-32
WP_054418502.1|6079341_6080253_+	diaminopimelate epimerase	NA	NA	NA	NA	NA
WP_059272826.1|6080257_6080935_+	DUF484 family protein	NA	NA	NA	NA	NA
WP_059272827.1|6080969_6081944_+	tyrosine recombinase XerC	NA	A0A166YH27	Gordonia_phage	31.0	1.2e-13
>prophage 434
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	6085626	6086349	6226215		Bacillus_virus(100.0%)	1	NA	NA
WP_059272831.1|6085626_6086349_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	27.7	1.5e-11
>prophage 435
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	6090105	6091440	6226215	protease	Erwinia_phage(100.0%)	1	NA	NA
WP_049077084.1|6090105_6091440_+|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A191ZC11	Erwinia_phage	30.6	4.5e-46
>prophage 436
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	6097536	6102013	6226215		Stx2-converting_phage(50.0%)	5	NA	NA
WP_100508966.1|6097536_6098799_-	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.2	3.1e-65
WP_049077126.1|6098947_6099601_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_054418522.1|6099634_6100234_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_049077130.1|6100233_6101187_-	MCE family protein	NA	NA	NA	NA	NA
WP_049077132.1|6101173_6102013_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.7	7.0e-21
>prophage 437
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	6108782	6109820	6226215		Tupanvirus(100.0%)	1	NA	NA
WP_059273125.1|6108782_6109820_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	40.2	1.0e-66
>prophage 438
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	6113454	6115497	6226215		Tupanvirus(100.0%)	1	NA	NA
WP_059272842.1|6113454_6115497_-	glycosyltransferase	NA	A0A2K9L0K5	Tupanvirus	24.7	6.2e-15
>prophage 439
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	6131388	6138865	6226215	tRNA	Enterobacteria_phage(60.0%)	7	NA	NA
WP_059272853.1|6131388_6131940_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	48.0	7.2e-43
WP_156430374.1|6131939_6132884_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	57.5	3.7e-95
WP_059272854.1|6132829_6133879_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	46.2	1.1e-79
WP_049077146.1|6133942_6135154_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_049077149.1|6135150_6136017_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_049077151.1|6136374_6138162_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.0	1.1e-07
WP_049077153.1|6138202_6138865_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	25.3	1.3e-09
>prophage 440
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	6159076	6165311	6226215		Streptococcus_phage(33.33%)	4	NA	NA
WP_059272860.1|6159076_6159805_-	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	37.9	3.0e-44
WP_026382027.1|6160333_6160855_-	single-stranded DNA-binding protein	NA	Q6V7S6	Burkholderia_virus	70.4	2.1e-36
WP_054419625.1|6161137_6162322_-	MFS transporter	NA	NA	NA	NA	NA
WP_059272861.1|6162449_6165311_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	54.0	1.1e-299
>prophage 441
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	6194358	6195168	6226215		Megavirus(100.0%)	1	NA	NA
WP_059272867.1|6194358_6195168_-	aspartyl/asparaginyl beta-hydroxylase domain-containing protein	NA	L7Y059	Megavirus	30.9	1.1e-23
>prophage 442
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	6203154	6203907	6226215		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_049077250.1|6203154_6203907_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	22.6	3.2e-09
>prophage 443
NZ_CP013923	Achromobacter denitrificans strain USDA-ARS-USMARC-56712 chromosome, complete genome	6226215	6212200	6218894	6226215		Klosneuvirus(33.33%)	6	NA	NA
WP_054495833.1|6212200_6213391_-	elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	29.5	3.1e-14
WP_049077256.1|6213467_6215570_-	elongation factor G	NA	A0A1S5SF82	Streptococcus_phage	26.1	6.1e-58
WP_006389600.1|6215588_6216059_-	30S ribosomal protein S7	NA	NA	NA	NA	NA
WP_005017264.1|6216234_6216612_-	30S ribosomal protein S12	NA	NA	NA	NA	NA
WP_049077257.1|6217215_6217917_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_049077259.1|6218177_6218894_+	response regulator transcription factor	NA	A0A1V0SGX0	Hokovirus	25.3	7.8e-05
