assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001513635.1_ASM151363v1	NZ_CP013835	Escherichia coli strain JJ2434 chromosome, complete genome	1	765966-766107	1	CRISPRCasFinder	no		DEDDh,DinG,cas3,RT,c2c9_V-U4,csa3	Orphan	GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGAAATGCAG	47	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,RT,c2c9_V-U4,csa3	NA|36aa|up_4|NZ_CP013835.1_762187_762295_-,NA	NA|399aa|up_9|NZ_CP013835.1_756628_757825_+	pfam04295, GD_AH_C, D-galactarate dehydratase / Altronate hydrolase, C-terminus	NA|323aa|up_8|NZ_CP013835.1_757852_758821_+	cd13669, PBP2_TRAP_TM0322_like, Periplasmic component of TRAP-type C4-dicarboxylate transport system TM0322 from Thermotoga maritima and similar proteins; the type 2 periplasmic binding protein fold	NA|154aa|up_7|NZ_CP013835.1_758880_759342_+	COG3090, DctM, TRAP-type C4-dicarboxylate transport system, small permease component [Carbohydrate transport and metabolism]	NA|437aa|up_6|NZ_CP013835.1_759341_760652_+	COG1593, DctQ, TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism]	NA|428aa|up_5|NZ_CP013835.1_760698_761982_-	PRK05614, gltA, citrate synthase	NA|36aa|up_4|NZ_CP013835.1_762187_762295_-	NA	NA|135aa|up_3|NZ_CP013835.1_762675_763080_+	PRK09487, sdhC, succinate dehydrogenase cytochrome b556 subunit	NA|116aa|up_2|NZ_CP013835.1_763073_763421_+	PRK09488, sdhD, succinate dehydrogenase membrane anchor subunit	NA|589aa|up_1|NZ_CP013835.1_763420_765187_+	PRK08958, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed	NA|239aa|up_0|NZ_CP013835.1_765202_765919_+	PRK05950, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed	NA|934aa|down_0|NZ_CP013835.1_766280_769082_+	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed	NA|406aa|down_1|NZ_CP013835.1_769096_770314_+	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA|389aa|down_2|NZ_CP013835.1_770407_771574_+	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta	NA|290aa|down_3|NZ_CP013835.1_771573_772443_+	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated	NA|241aa|down_4|NZ_CP013835.1_772546_773269_-	PRK09764, PRK09764, GntR family transcriptional regulator	NA|639aa|down_5|NZ_CP013835.1_773437_775354_+	PRK09765, PRK09765, PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional	NA|878aa|down_6|NZ_CP013835.1_775371_778005_+	PRK09819, PRK09819, mannosylglycerate hydrolase	NA|398aa|down_7|NZ_CP013835.1_778202_779396_+	sd00006, TPR, Tetratricopeptide repeat	NA|523aa|down_8|NZ_CP013835.1_780938_782507_+	PRK15097, PRK15097, cytochrome bd-I ubiquinol oxidase subunit CydA	NA|380aa|down_9|NZ_CP013835.1_782522_783662_+	PRK15003, PRK15003, cytochrome d ubiquinol oxidase subunit II
GCF_001513635.1_ASM151363v1	NZ_CP013835	Escherichia coli strain JJ2434 chromosome, complete genome	2	932173-932255	2	CRISPRCasFinder	no		DEDDh,DinG,cas3,RT,c2c9_V-U4,csa3	Orphan	AGTTCACTGCCGTACAGGCAGCT	23	0	0	NA	NA	I-F	1	1	Orphan	DEDDh,DinG,cas3,RT,c2c9_V-U4,csa3	NA,NA	NA|551aa|up_9|NZ_CP013835.1_918663_920316_-	PRK05290, PRK05290, hybrid cluster protein; Provisional	NA|300aa|up_8|NZ_CP013835.1_920459_921359_-	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|232aa|up_7|NZ_CP013835.1_921773_922469_-	PRK05420, PRK05420, aquaporin Z; Provisional	NA|553aa|up_6|NZ_CP013835.1_922893_924552_+	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|319aa|up_5|NZ_CP013835.1_924548_925505_-	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|372aa|up_4|NZ_CP013835.1_925655_926771_+	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|649aa|up_3|NZ_CP013835.1_926767_928714_+	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|75aa|up_2|NZ_CP013835.1_928786_929011_-	PRK09937, PRK09937, cold shock-like protein CspD	NA|107aa|up_1|NZ_CP013835.1_929333_929654_+	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|759aa|up_0|NZ_CP013835.1_929684_931961_+	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|73aa|down_0|NZ_CP013835.1_932645_932864_-	PRK00276, infA, translation initiation factor IF-1; Validated	NA|235aa|down_1|NZ_CP013835.1_933148_933853_-	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|574aa|down_2|NZ_CP013835.1_933894_935616_-	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|589aa|down_3|NZ_CP013835.1_935616_937383_-	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|322aa|down_4|NZ_CP013835.1_937505_938471_-	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|165aa|down_5|NZ_CP013835.1_939014_939509_+	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|1369aa|down_6|NZ_CP013835.1_939643_943750_+	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|204aa|down_7|NZ_CP013835.1_943908_944520_+	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|448aa|down_8|NZ_CP013835.1_944530_945874_+	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|431aa|down_9|NZ_CP013835.1_945964_947257_+	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional
