assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001483865.1_ASM148386v1	NZ_CP013729	Roseateles depolymerans strain KCTC 42856, complete genome	1	1913888-1913999	1	CRISPRCasFinder	no		DEDDh,WYL,csa3,Cas9_archaeal,DinG,RT	Orphan	TGATTGGCCCCCCAGTCGCTTCGCTCCTG	29	1	4	1913917-1913970|1913917-1913970|1913917-1913970|1913917-1913970	NZ_CP013729.1_5637708-5637655|NZ_CP013729.1_1383285-1383338|NZ_CP013729.1_1958298-1958351|NZ_CP013729.1_5208892-5208945	NA	1	1	Orphan	DEDDh,WYL,csa3,Cas9_archaeal,DinG,RT	NA|300aa|up_6|NZ_CP013729.1_1908425_1909325_-,NA	NA|563aa|up_9|NZ_CP013729.1_1905700_1907389_+	cd05971, MACS_like_3, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS)	NA|158aa|up_8|NZ_CP013729.1_1907526_1908000_+	pfam07238, PilZ, PilZ domain	NA|106aa|up_7|NZ_CP013729.1_1908102_1908420_+	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]	NA|300aa|up_6|NZ_CP013729.1_1908425_1909325_-	NA	NA|252aa|up_5|NZ_CP013729.1_1909402_1910158_-	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|97aa|up_4|NZ_CP013729.1_1910163_1910454_-	COG3655, COG3655, Predicted transcriptional regulator [Transcription]	NA|185aa|up_3|NZ_CP013729.1_1910470_1911025_-	pfam11188, DUF2975, Protein of unknown function (DUF2975)	NA|367aa|up_2|NZ_CP013729.1_1911095_1912196_-	COG4335, COG4335, DNA alkylation repair enzyme [DNA replication, recombination, and repair]	NA|168aa|up_1|NZ_CP013729.1_1912298_1912802_+	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins	NA|245aa|up_0|NZ_CP013729.1_1912808_1913543_+	PRK00220, PRK00220, glycerol-3-phosphate 1-O-acyltransferase PlsY	NA|215aa|down_0|NZ_CP013729.1_1914000_1914645_-	PRK11630, PRK11630, threonylcarbamoyl-AMP synthase	NA|291aa|down_1|NZ_CP013729.1_1914651_1915524_-	COG0613, COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only]	NA|615aa|down_2|NZ_CP013729.1_1915532_1917377_-	cd01948, EAL, EAL domain	NA|154aa|down_3|NZ_CP013729.1_1917517_1917979_-	pfam10116, Host_attach, Protein required for attachment to host cells	NA|151aa|down_4|NZ_CP013729.1_1918374_1918827_+	PRK10996, PRK10996, thioredoxin 2; Provisional	NA|590aa|down_5|NZ_CP013729.1_1918831_1920601_-	PRK11070, PRK11070, single-stranded-DNA-specific exonuclease RecJ	NA|310aa|down_6|NZ_CP013729.1_1920603_1921533_-	COG4255, COG4255, Uncharacterized protein conserved in bacteria [Function unknown]	NA|288aa|down_7|NZ_CP013729.1_1921597_1922461_+	COG2908, COG2908, Uncharacterized protein conserved in bacteria [Function unknown]	NA|686aa|down_8|NZ_CP013729.1_1922568_1924626_+	PRK05443, PRK05443, polyphosphate kinase; Provisional	NA|507aa|down_9|NZ_CP013729.1_1924707_1926228_-	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism]
GCF_001483865.1_ASM148386v1	NZ_CP013729	Roseateles depolymerans strain KCTC 42856, complete genome	2	2046910-2047005	2	CRISPRCasFinder	no		DEDDh,WYL,csa3,Cas9_archaeal,DinG,RT	Orphan	TCATCAAGACCAACATCCGGCGA	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,csa3,Cas9_archaeal,DinG,RT	NA,NA	NA|315aa|up_9|NZ_CP013729.1_2036407_2037352_-	PRK05687, fliH, flagellar assembly protein FliH	NA|332aa|up_8|NZ_CP013729.1_2037385_2038381_-	PRK05686, fliG, flagellar motor switch protein G; Validated	NA|571aa|up_7|NZ_CP013729.1_2038465_2040178_-	PRK06007, fliF, flagellar basal body M-ring protein FliF	NA|106aa|up_6|NZ_CP013729.1_2040344_2040662_+	pfam02049, FliE, Flagellar hook-basal body complex protein FliE	NA|289aa|up_5|NZ_CP013729.1_2040707_2041574_-	pfam07317, YcgR, Flagellar regulator YcgR	NA|100aa|up_4|NZ_CP013729.1_2041599_2041899_-	pfam05400, FliT, Flagellar protein FliT	NA|145aa|up_3|NZ_CP013729.1_2042006_2042441_-	pfam02561, FliS, Flagellar protein FliS	NA|477aa|up_2|NZ_CP013729.1_2042627_2044058_-	PRK08032, fliD, flagellar capping protein; Reviewed	NA|290aa|up_1|NZ_CP013729.1_2044212_2045082_-	PRK12802, PRK12802, flagellin; Provisional	NA|281aa|up_0|NZ_CP013729.1_2045397_2046240_-	PRK12802, PRK12802, flagellin; Provisional	NA|280aa|down_0|NZ_CP013729.1_2047412_2048252_-	PRK12802, PRK12802, flagellin; Provisional	NA|171aa|down_1|NZ_CP013729.1_2048751_2049264_+	sd00006, TPR, Tetratricopeptide repeat	NA|108aa|down_2|NZ_CP013729.1_2049720_2050044_+	pfam05247, FlhD, Flagellar transcriptional activator (FlhD)	NA|179aa|down_3|NZ_CP013729.1_2050111_2050648_+	PRK12722, PRK12722, flagellar transcriptional regulator FlhC	NA|368aa|down_4|NZ_CP013729.1_2050657_2051761_+	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide	NA|108aa|down_5|NZ_CP013729.1_2052052_2052376_+	pfam05247, FlhD, Flagellar transcriptional activator (FlhD)	NA|179aa|down_6|NZ_CP013729.1_2052441_2052978_+	PRK12722, PRK12722, flagellar transcriptional regulator FlhC	NA|267aa|down_7|NZ_CP013729.1_2053089_2053890_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|286aa|down_8|NZ_CP013729.1_2053994_2054852_+	TIGR03818, MotA1, flagellar motor stator protein MotA	NA|315aa|down_9|NZ_CP013729.1_2054873_2055818_+	PRK09041, motB, motility protein MotB
GCF_001483865.1_ASM148386v1	NZ_CP013729	Roseateles depolymerans strain KCTC 42856, complete genome	3	4764861-4764950	3	CRISPRCasFinder	no		DEDDh,WYL,csa3,Cas9_archaeal,DinG,RT	Orphan	GGGGGGCCGCCGTCAGGCGGTAGGGGGG	28	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,csa3,Cas9_archaeal,DinG,RT	NA,NA	NA|130aa|up_9|NZ_CP013729.1_4754864_4755254_+	pfam14552, Tautomerase_2, Tautomerase enzyme	NA|114aa|up_8|NZ_CP013729.1_4755255_4755597_-	COG3795, COG3795, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1126aa|up_7|NZ_CP013729.1_4755687_4759065_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|309aa|up_6|NZ_CP013729.1_4759119_4760046_+	cd06231, M14_REP34-like, Peptidase M14-like domain similar to rapid encystment phenotype 34 (REP34)	NA|208aa|up_5|NZ_CP013729.1_4760159_4760783_-	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold	NA|303aa|up_4|NZ_CP013729.1_4760840_4761749_-	PRK04375, PRK04375, protoheme IX farnesyltransferase; Provisional	NA|402aa|up_3|NZ_CP013729.1_4761745_4762951_-	pfam02628, COX15-CtaA, Cytochrome oxidase assembly protein	NA|194aa|up_2|NZ_CP013729.1_4762960_4763542_-	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold	NA|259aa|up_1|NZ_CP013729.1_4763615_4764392_-	cd06662, SURF1, SURF1 superfamily	NA|70aa|up_0|NZ_CP013729.1_4764466_4764676_+	pfam11137, DUF2909, Protein of unknown function (DUF2909)	NA|83aa|down_0|NZ_CP013729.1_4765918_4766167_-	pfam11174, DUF2970, Protein of unknown function (DUF2970)	NA|222aa|down_1|NZ_CP013729.1_4766163_4766829_-	PRK05089, PRK05089, cytochrome C oxidase assembly protein; Provisional	NA|542aa|down_2|NZ_CP013729.1_4766965_4768591_-	cd01663, Cyt_c_Oxidase_I, Cytochrome C oxidase subunit I	NA|377aa|down_3|NZ_CP013729.1_4768667_4769798_-	COG1622, CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion]	NA|264aa|down_4|NZ_CP013729.1_4770210_4771002_-	TIGR02072, Malonyl-_O-methyltransferase, malonyl-acyl carrier protein O-methyltransferase BioC	NA|255aa|down_5|NZ_CP013729.1_4771216_4771981_+	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only]	NA|157aa|down_6|NZ_CP013729.1_4772034_4772505_+	cd18094, SpoU-like_TrmL, SAM-dependent tRNA methylase related to TrmL	NA|337aa|down_7|NZ_CP013729.1_4772592_4773603_-	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA|154aa|down_8|NZ_CP013729.1_4773765_4774227_-	PRK05751, PRK05751, preprotein translocase subunit SecB; Validated	NA|86aa|down_9|NZ_CP013729.1_4774580_4774838_-	TIGR02181, GRX_bact, Glutaredoxin, GrxC family
GCF_001483865.1_ASM148386v1	NZ_CP013729	Roseateles depolymerans strain KCTC 42856, complete genome	4	5448053-5448142	4	CRISPRCasFinder	no		DEDDh,WYL,csa3,Cas9_archaeal,DinG,RT	Orphan	GCCCCCCAGTCGCTCCGCTCCTGCCCCC	28	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,csa3,Cas9_archaeal,DinG,RT	NA,NA	NA|681aa|up_9|NZ_CP013729.1_5433555_5435598_-	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]	NA|962aa|up_8|NZ_CP013729.1_5435736_5438622_-	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|730aa|up_7|NZ_CP013729.1_5439077_5441267_-	PRK02999, PRK02999, malate synthase G; Provisional	NA|313aa|up_6|NZ_CP013729.1_5441513_5442452_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|153aa|up_5|NZ_CP013729.1_5442448_5442907_+	pfam09980, DUF2214, Predicted membrane protein (DUF2214)	NA|109aa|up_4|NZ_CP013729.1_5442931_5443258_-	PRK11505, PRK11505, phosphate starvation-inducible protein PsiF	NA|462aa|up_3|NZ_CP013729.1_5443361_5444747_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|578aa|up_2|NZ_CP013729.1_5444832_5446566_+	PRK01611, argS, arginyl-tRNA synthetase; Reviewed	NA|230aa|up_1|NZ_CP013729.1_5446562_5447252_+	COG3087, FtsN, Cell division protein [Cell division and chromosome partitioning]	NA|227aa|up_0|NZ_CP013729.1_5447351_5448032_+	cd03019, DsbA_DsbA, DsbA family, DsbA subfamily; DsbA is a monomeric thiol disulfide oxidoreductase protein containing a redox active CXXC motif imbedded in a TRX fold	NA|206aa|down_0|NZ_CP013729.1_5448514_5449132_+	TIGR03002, outer_YhbN_LptA, lipopolysaccharide transport periplasmic protein LptA	NA|256aa|down_1|NZ_CP013729.1_5449128_5449896_+	COG1137, YhbG, ABC-type (unclassified) transport system, ATPase component [General function prediction only]	NA|516aa|down_2|NZ_CP013729.1_5449910_5451458_+	PRK05932, PRK05932, RNA polymerase factor sigma-54; Reviewed	NA|427aa|down_3|NZ_CP013729.1_5451590_5452871_+	PRK11783, rlmL, bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA|87aa|down_4|NZ_CP013729.1_5452933_5453194_+	TIGR02606, Antitoxin_ParD, putative addiction module antidote protein, CC2985 family	NA|102aa|down_5|NZ_CP013729.1_5453190_5453496_+	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE	NA|256aa|down_6|NZ_CP013729.1_5453490_5454258_-	PRK11713, PRK11713, 16S ribosomal RNA methyltransferase RsmE; Provisional	NA|186aa|down_7|NZ_CP013729.1_5454260_5454818_-	pfam03358, FMN_red, NADPH-dependent FMN reductase	NA|208aa|down_8|NZ_CP013729.1_5454840_5455464_-	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|558aa|down_9|NZ_CP013729.1_5455528_5457202_-	PRK07059, PRK07059, Long-chain-fatty-acid--CoA ligase; Validated
