assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001469775.1_ASM146977v1	NZ_CP013610	Lactobacillus delbrueckii subsp. bulgaricus strain MN-BM-F01 chromosome, complete genome	1	499640-499729	1	CRISPRCasFinder	no		c2c9_V-U4,cas3,DEDDh,cas9,cas1,cas2,csn2,DinG,csa3,Cas14u_CAS-V,cas14j,WYL	Orphan	TAGAGCGAGTAAGACTTACACAAGA	25	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DEDDh,cas9,cas1,cas2,csn2,DinG,csa3,Cas14u_CAS-V,cas14j,WYL	NA|63aa|up_8|NZ_CP013610.1_491559_491748_-,NA|106aa|up_2|NZ_CP013610.1_496485_496803_+,NA|106aa|up_1|NZ_CP013610.1_496974_497292_+,NA|82aa|down_0|NZ_CP013610.1_499959_500205_+,NA|106aa|down_1|NZ_CP013610.1_500223_500541_+,NA|117aa|down_2|NZ_CP013610.1_500553_500904_+,NA|148aa|down_3|NZ_CP013610.1_500908_501352_+,NA|155aa|down_4|NZ_CP013610.1_501417_501882_+	NA|298aa|up_9|NZ_CP013610.1_490580_491474_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|63aa|up_8|NZ_CP013610.1_491559_491748_-	NA	NA|276aa|up_7|NZ_CP013610.1_491819_492647_-	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase	NA|337aa|up_6|NZ_CP013610.1_492669_493680_-	pfam10282, Lactonase, Lactonase, 7-bladed beta-propeller	NA|381aa|up_5|NZ_CP013610.1_493806_494949_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|318aa|up_4|NZ_CP013610.1_495158_496112_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|65aa|up_3|NZ_CP013610.1_496291_496486_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|106aa|up_2|NZ_CP013610.1_496485_496803_+	NA	NA|106aa|up_1|NZ_CP013610.1_496974_497292_+	NA	NA|288aa|up_0|NZ_CP013610.1_497288_498152_+	smart00942, PriCT_1, Primase C terminal 1 (PriCT-1)	NA|82aa|down_0|NZ_CP013610.1_499959_500205_+	NA	NA|106aa|down_1|NZ_CP013610.1_500223_500541_+	NA	NA|117aa|down_2|NZ_CP013610.1_500553_500904_+	NA	NA|148aa|down_3|NZ_CP013610.1_500908_501352_+	NA	NA|155aa|down_4|NZ_CP013610.1_501417_501882_+	NA	NA|127aa|down_5|NZ_CP013610.1_502458_502839_+	pfam03829, PTSIIA_gutA, PTS system glucitol/sorbitol-specific IIA component	NA|379aa|down_6|NZ_CP013610.1_502848_503985_+	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|186aa|down_7|NZ_CP013610.1_504030_504588_+	cd18094, SpoU-like_TrmL, SAM-dependent tRNA methylase related to TrmL	NA|132aa|down_8|NZ_CP013610.1_504619_505015_+	pfam06619, DUF1149, Protein of unknown function (DUF1149)	NA|773aa|down_9|NZ_CP013610.1_505034_507353_+	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning]
GCF_001469775.1_ASM146977v1	NZ_CP013610	Lactobacillus delbrueckii subsp. bulgaricus strain MN-BM-F01 chromosome, complete genome	2	767269-768625	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2,csn2	c2c9_V-U4,cas3,DEDDh,cas9,cas1,cas2,csn2,DinG,csa3,Cas14u_CAS-V,cas14j,WYL	Type II-B,Type II-A,Type II-C	GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC,GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC,GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	36,36,36	0	0	NA	NA	NA:NA:NA	19,20,20	20	TypeII-B,TypeII-A,TypeII-C	c2c9_V-U4,cas3,DEDDh,cas9,cas1,cas2,csn2,DinG,csa3,Cas14u_CAS-V,cas14j,WYL	NA|68aa|up_9|NZ_CP013610.1_756328_756532_+,NA	NA|68aa|up_9|NZ_CP013610.1_756328_756532_+	NA	NA|75aa|up_8|NZ_CP013610.1_756871_757096_-	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain	NA|149aa|up_7|NZ_CP013610.1_757548_757995_+	COG3976, COG3976, Uncharacterized protein conserved in bacteria [Function unknown]	NA|205aa|up_6|NZ_CP013610.1_758195_758810_+	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only]	NA|223aa|up_5|NZ_CP013610.1_758806_759475_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|420aa|up_4|NZ_CP013610.1_759477_760737_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	cas9|1421aa|up_3|NZ_CP013610.1_760896_765159_+	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9	cas1|304aa|up_2|NZ_CP013610.1_765377_766289_+	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas2|102aa|up_1|NZ_CP013610.1_766266_766572_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|223aa|up_0|NZ_CP013610.1_766568_767237_+	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2	NA|367aa|down_0|NZ_CP013610.1_768980_770081_+	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine	NA|409aa|down_1|NZ_CP013610.1_770082_771309_+	cd00644, HMG-CoA_reductase_classII, Class II hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR)	NA|388aa|down_2|NZ_CP013610.1_771312_772476_+	TIGR01835, 3-hydroxy-3-methylglutaryl_CoA_synthase, 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade	NA|453aa|down_3|NZ_CP013610.1_772640_773999_+	pfam06738, ThrE, Putative threonine/serine exporter	NA|169aa|down_4|NZ_CP013610.1_774056_774563_-	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins	NA|315aa|down_5|NZ_CP013610.1_774643_775588_+	PRK00517, prmA, 50S ribosomal protein L11 methyltransferase	NA|754aa|down_6|NZ_CP013610.1_775728_777990_+	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]	NA|146aa|down_7|NZ_CP013610.1_778018_778456_+	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional	NA|429aa|down_8|NZ_CP013610.1_778739_780026_+	TIGR00442, hisS, histidyl-tRNA synthetase	NA|615aa|down_9|NZ_CP013610.1_780041_781886_+	PRK00476, aspS, aspartyl-tRNA synthetase; Validated
GCF_001469775.1_ASM146977v1	NZ_CP013610	Lactobacillus delbrueckii subsp. bulgaricus strain MN-BM-F01 chromosome, complete genome	3	1796223-1796325	3	CRISPRCasFinder	no		c2c9_V-U4,cas3,DEDDh,cas9,cas1,cas2,csn2,DinG,csa3,Cas14u_CAS-V,cas14j,WYL	Orphan	GTTGGCGTAGGGGAGTGAGAACGATGAAGATCGAT	35	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DEDDh,cas9,cas1,cas2,csn2,DinG,csa3,Cas14u_CAS-V,cas14j,WYL	NA|305aa|up_7|NZ_CP013610.1_1786322_1787237_+,NA|80aa|up_6|NZ_CP013610.1_1787295_1787535_-,NA|58aa|down_1|NZ_CP013610.1_1798982_1799156_-	NA|468aa|up_9|NZ_CP013610.1_1783477_1784881_-	PRK00485, fumC, fumarate hydratase; Reviewed	NA|80aa|up_8|NZ_CP013610.1_1785326_1785566_-	PRK10811, rne, ribonuclease E; Reviewed	NA|305aa|up_7|NZ_CP013610.1_1786322_1787237_+	NA	NA|80aa|up_6|NZ_CP013610.1_1787295_1787535_-	NA	NA|167aa|up_5|NZ_CP013610.1_1787630_1788131_-	cd02908, Macro_OAADPr_deacetylase, macrodomain, O-acetyl-ADP-ribose (OAADPr) family	NA|261aa|up_4|NZ_CP013610.1_1788130_1788913_-	pfam13350, Y_phosphatase3, Tyrosine phosphatase family	NA|527aa|up_3|NZ_CP013610.1_1789024_1790605_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|732aa|up_2|NZ_CP013610.1_1790591_1792787_-	COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]	NA|253aa|up_1|NZ_CP013610.1_1793111_1793870_-	pfam13350, Y_phosphatase3, Tyrosine phosphatase family	NA|223aa|up_0|NZ_CP013610.1_1795450_1796119_+	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only]	NA|697aa|down_0|NZ_CP013610.1_1796673_1798764_+	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|58aa|down_1|NZ_CP013610.1_1798982_1799156_-	NA	NA|88aa|down_2|NZ_CP013610.1_1799597_1799861_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|221aa|down_3|NZ_CP013610.1_1799785_1800448_-	pfam05525, Branch_AA_trans, Branched-chain amino acid transport protein	NA|66aa|down_4|NZ_CP013610.1_1800875_1801073_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|101aa|down_5|NZ_CP013610.1_1801510_1801813_+	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|304aa|down_6|NZ_CP013610.1_1802362_1803274_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|250aa|down_7|NZ_CP013610.1_1803427_1804177_-	COG2071, COG2071, Predicted glutamine amidotransferases [General function prediction only]	NA|269aa|down_8|NZ_CP013610.1_1804181_1804988_-	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily	NA|293aa|down_9|NZ_CP013610.1_1805052_1805931_-	pfam06028, DUF915, Alpha/beta hydrolase of unknown function (DUF915)
