bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	1.1|320368|25|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	92.00	25	2	0	1	25	320537	320561	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	4e-04	34.9	1.0	GGCGAAAATACAGCTTACAATAATG	320537-320561	GGCGAAAAGTCAGCTTACAATAATG	2
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	1.2|320424|25|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	92.00	25	2	0	1	25	2232359	2232383	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	4e-04	34.9	1.0	TTGGAACAGCAATTTCTACAGACAA	2232359-2232383	TTGGAACACCAATTCCTACAGACAA	2
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	3.1|867900|31|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	100.00	31	0	0	1	31	962188	962158	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	8e-09	50.7	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	962158-962188	GGGCCCCAACACAGAGAATTTCGAAAAGAAA	0
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	3.1|867900|31|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	100.00	31	0	0	1	31	1000989	1001019	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	8e-09	50.7	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	1000989-1001019	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	0
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	3.1|867900|31|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	100.00	31	0	0	1	31	2087219	2087249	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	8e-09	50.7	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	2087219-2087249	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	0
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	3.1|867900|31|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	100.00	31	0	0	1	31	2087329	2087359	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	8e-09	50.7	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	2087329-2087359	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	0
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	3.1|867900|31|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	100.00	31	0	0	1	31	2146536	2146566	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	8e-09	50.7	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	2146536-2146566	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	0
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	3.1|867900|31|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	96.77	31	1	0	1	31	302465	302495	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	7e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	302465-302495	TTTCTTTTCGAAATTCTCTTTGTTGGGGCCC	1
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	3.1|867900|31|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	96.77	31	1	0	1	31	428390	428360	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	7e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	428360-428390	GGGCCCCAACATAGAGAATTTCGAAAAGAAA	1
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	3.1|867900|31|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	96.77	31	1	0	1	31	697155	697125	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	7e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	697125-697155	GGGGCCCAACACAGAGAATTTCGAAAAGAAA	1
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	3.1|867900|31|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	96.77	31	1	0	1	31	821587	821557	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	7e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	821557-821587	GGGCCCCAACAAAGAGAATTTCGAAAAGAAA	1
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	3.1|867900|31|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	96.77	31	1	0	1	31	912819	912849	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	7e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	912819-912849	TTTCTTTTCGAAATTCTCTATGTTGGGGCCC	1
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	3.1|867900|31|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	96.77	31	1	0	1	31	1109251	1109281	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	7e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	1109251-1109281	TTTCTTTTCGAAATTCTCTTTGTTGGGGCCC	1
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	3.1|867900|31|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	96.77	31	1	0	1	31	1209579	1209549	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	7e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	1209549-1209579	GGGCCCCAACACAGAGAATTTCGAATAGAAA	1
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	3.1|867900|31|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	96.77	31	1	0	1	31	1209633	1209603	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	7e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	1209603-1209633	GGGCCCCAACACAGAGAATTTCGAATAGAAA	1
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	3.1|867900|31|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	96.77	31	1	0	1	31	1854804	1854774	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	7e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	1854774-1854804	GGGCCCCAACATAGAGAATTTCGAAAAGAAA	1
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	3.1|867900|31|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	96.77	31	1	0	1	31	1945582	1945552	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	7e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	1945552-1945582	GGGCCCCAACACAGAGAATTTCGACAAGAAA	1
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	3.1|867900|31|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	96.77	31	1	0	1	31	2395783	2395813	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	7e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	2395783-2395813	TTTCTTTTCGAAATTCTCTTTGTTGGGGCCC	1
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	3.1|867900|31|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	96.77	31	1	0	1	31	2440852	2440822	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	7e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	2440822-2440852	GGGCCCCAACACAGAGAATTTCAAAAAGAAA	1
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	3.1|867900|31|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	93.55	31	2	0	1	31	876881	876911	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	6e-07	44.4	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	876881-876911	TTTCATTTCGAAATTCTCTATGTTGGGGCCC	2
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	3.1|867900|31|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	93.55	31	2	0	1	31	916957	916927	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	6e-07	44.4	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	916927-916957	GGTCCCCAACACAGAGGATTTCGAAAAGAAA	2
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	3.1|867900|31|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	93.55	31	2	0	1	31	1418361	1418391	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	6e-07	44.4	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	1418361-1418391	TTTCTTTTCGGAATTCTCTGTGTTGGAGCCC	2
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	3.1|867900|31|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	93.55	31	2	0	1	31	1464451	1464481	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	6e-07	44.4	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	1464451-1464481	TTTCTTTTCGAAAATCTCTGTGTTGAGGCCC	2
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	3.1|867900|31|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	93.55	31	2	0	1	31	2406531	2406561	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	6e-07	44.4	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	2406531-2406561	TTTCTTTTTGAAATTCTCTATGTTGGGGCCC	2
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	3.1|867900|31|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	93.55	31	2	0	1	31	2855037	2855067	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	6e-07	44.4	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	2855037-2855067	TTTCTTTTCGAAATTCTCTGTATTGGGGGCC	2
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	4.1|917251|31|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	93.55	31	2	0	1	31	862327	862297	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	6e-07	44.4	1.0	AAGAACCAATACATAATAAAGCATAAGTGAT	862297-862327	ATCACTAATGATTTATTATGTATTGGTTCTT	2
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	6.1|1945625|26|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	100.00	26	0	0	1	26	2087291	2087266	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	2e-06	42.8	1.0	AGAATTTCAAAAAAGAAATTCTACAG	2087266-2087291	CTGTAGAATTTCTTTTTTGAAATTCT	0
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	9.1|2440934|26|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	100.00	26	0	0	1	26	1728119	1728094	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	2e-06	42.8	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	1728094-1728119	CCGCCAGCTTCTATGTTGGGGCCCCG	0
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	9.1|2440934|26|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	96.15	26	1	0	1	26	912908	912883	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	1e-05	39.6	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	912883-912908	CCGTCAGCTTCTATGTTGGGGCCCCG	1
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	9.1|2440934|26|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	92.31	26	2	0	1	26	961963	961988	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	1e-04	36.5	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	961963-961988	CGGGGCCCCAACACAGAAGCTGGTGG	2
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	9.1|2440934|26|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	92.31	26	2	0	1	26	1414032	1414057	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	1e-04	36.5	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	1414032-1414057	CGGGGCCCCAACACAGAAACTGGCGG	2
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	9.1|2440934|26|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	92.31	26	2	0	1	26	2232397	2232422	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	1e-04	36.5	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	2232397-2232422	CGGGGCCCCAACACAAAAGCTGGCGG	2
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	9.1|2440934|26|NZ_CP013621|CRISPRCasFinder	NZ_CP013621.1	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	92.31	26	2	0	1	26	2572850	2572825	320337-320536|705658-705766|867874-867956|917226-917306|1857237-1857319|1945591-1945684|2221285-2221497|2276916-2277066|2440904-2440989|2617116-2617210|2645061-2645171	1e-04	36.5	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	2572825-2572850	CCGCCAGCTACTGTGTTGGGGCCCCG	2
