The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	2894543	346620	406944	2894543	protease,plate,transposase,capsid,tail,portal,integrase,head,holin,terminase	Staphylococcus_phage(93.94%)	58	360282:360298	404224:404240
WP_000527012.1|346620_348174_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_001066361.1|348187_348874_+	DUF5079 family protein	NA	NA	NA	NA	NA
WP_000417867.1|348994_349444_+	DUF5085 family protein	NA	NA	NA	NA	NA
WP_001004376.1|349440_349890_+	DUF5085 family protein	NA	NA	NA	NA	NA
WP_000394918.1|349899_350511_+	DUF5080 family protein	NA	NA	NA	NA	NA
WP_000142069.1|350707_351208_+	TIGR01741 family protein	NA	NA	NA	NA	NA
WP_001008484.1|351218_351710_+	TIGR01741 family protein	NA	NA	NA	NA	NA
WP_000208402.1|351918_352602_+	DUF5079 family protein	NA	NA	NA	NA	NA
WP_000431306.1|352964_353183_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000822167.1|354400_354775_+	DUF4467 domain-containing protein	NA	NA	NA	NA	NA
WP_000415670.1|354924_355323_+	DUF4064 domain-containing protein	NA	NA	NA	NA	NA
WP_000659770.1|355538_356363_-	formate/nitrite transporter family protein	NA	NA	NA	NA	NA
WP_000745095.1|356598_357909_-	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA	NA
WP_001033887.1|358492_359383_+	5'-nucleotidase, lipoprotein e(P4) family	NA	NA	NA	NA	NA
WP_000477931.1|359631_360681_+	ABC transporter permease	NA	NA	NA	NA	NA
360282:360298	attL	TATTGAAAATTTACCAG	NA	NA	NA	NA
WP_000911019.1|360693_361371_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.9	9.2e-32
WP_000364856.1|361578_362610_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_001283977.1|362952_364071_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000002071.1|364045_364969_+	pseudouridine-5'-phosphate glycosidase	NA	NA	NA	NA	NA
WP_001022977.1|364979_366200_+	NupC/NupG family nucleoside CNT transporter	NA	NA	NA	NA	NA
WP_000665744.1|366305_367838_-	sodium:solute symporter	NA	NA	NA	NA	NA
WP_001030735.1|367877_368759_-	N-acetylneuraminate lyase	NA	NA	NA	NA	NA
WP_000291432.1|368916_369777_+	ROK family protein	NA	NA	NA	NA	NA
WP_000667388.1|370053_370854_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000936721.1|370993_371662_+	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA	NA
WP_001077706.1|371791_373105_-	YjiH family protein	NA	NA	NA	NA	NA
WP_000264744.1|375549_376755_-|integrase	site-specific integrase	integrase	Q4ZBP1	Staphylococcus_phage	99.5	1.2e-220
WP_000191462.1|376880_377495_+	hypothetical protein	NA	A0A2I6PEZ0	Staphylococcus_phage	99.0	7.4e-105
WP_074370993.1|377491_377638_-	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	93.8	1.7e-15
WP_158501056.1|377864_377993_+	DUF1514 family protein	NA	A0A2I6PEP5	Staphylococcus_phage	92.6	2.8e-06
WP_015978074.1|380446_380551_-	hypothetical protein	NA	A0A2I6PDP6	Staphylococcus_phage	100.0	2.7e-12
WP_000665203.1|380684_380975_+	VRR-NUC domain-containing protein	NA	A0A2I6PEN7	Staphylococcus_phage	100.0	6.5e-51
WP_001793488.1|380955_382323_+	DEAD/DEAH box helicase	NA	A0A2I6PE95	Staphylococcus_phage	100.0	1.7e-263
WP_000160689.1|382918_383233_+	HNH endonuclease	NA	A0A2I6PDC4	Staphylococcus_phage	100.0	2.5e-56
WP_000778933.1|383360_383666_+|terminase	P27 family phage terminase small subunit	terminase	A0A2I6PEQ6	Staphylococcus_phage	100.0	2.9e-49
WP_000153551.1|383655_385347_+|terminase	terminase large subunit	terminase	A0A2I6PE99	Staphylococcus_phage	99.8	0.0e+00
WP_001100670.1|385351_386590_+|portal	phage portal protein	portal	A0A2I6PEA6	Staphylococcus_phage	100.0	6.9e-235
WP_000061868.1|386573_387347_+|protease	Clp protease ClpP	protease	A0A2I6PE26	Staphylococcus_phage	100.0	4.9e-138
WP_001142735.1|387358_388522_+|capsid	phage major capsid protein	capsid	A0A2I6PE62	Staphylococcus_phage	100.0	3.6e-217
WP_000050975.1|388590_388869_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2I6PE36	Staphylococcus_phage	100.0	2.1e-46
WP_000395505.1|388880_389213_+	hypothetical protein	NA	A0A2I6PDD6	Staphylococcus_phage	99.1	2.4e-57
WP_000110020.1|389209_389611_+	hypothetical protein	NA	A0A2I6PDD3	Staphylococcus_phage	100.0	6.2e-68
WP_001023802.1|389611_390007_+	DUF3168 domain-containing protein	NA	A0A2I6PDD8	Staphylococcus_phage	100.0	2.6e-66
WP_000807540.1|390041_390683_+|tail	tail protein	tail	A0A2I6PE59	Staphylococcus_phage	100.0	1.0e-120
WP_000169128.1|390774_391230_+	Ig domain-containing protein	NA	A0A2I6PF45	Staphylococcus_phage	100.0	1.3e-77
WP_000589167.1|391287_391638_+	hypothetical protein	NA	A0A2I6PEQ2	Staphylococcus_phage	100.0	1.1e-55
WP_000438833.1|391679_391838_+	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
WP_060585173.1|391851_398052_+|tail	phage tail tape measure protein	tail	A0A1X9IGU9	Staphylococcus_phage	99.7	0.0e+00
WP_001190533.1|398051_398876_+|tail	phage tail family protein	tail	A0A2I6PER3	Staphylococcus_phage	100.0	4.1e-159
WP_000384462.1|398884_400468_+|tail	phage tail protein	tail	Q8SDP1	Staphylococcus_virus	100.0	7.1e-309
WP_000179860.1|400467_400758_+	hypothetical protein	NA	A0A2I6PF46	Staphylococcus_phage	100.0	2.1e-49
WP_000429552.1|400773_402684_+	hypothetical protein	NA	A0A2K9VBU3	Staphylococcus_phage	100.0	0.0e+00
WP_000067131.1|402683_404150_+|plate	phage baseplate upper protein	plate	A0A2I6PE72	Staphylococcus_phage	100.0	1.5e-273
WP_001166599.1|404149_404539_+	DUF2977 domain-containing protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
404224:404240	attR	TATTGAAAATTTACCAG	NA	NA	NA	NA
WP_000916020.1|404531_404696_+	XkdX family protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
WP_000466775.1|404741_405041_+	DUF2951 family protein	NA	M9QRV2	Staphylococcus_phage	98.0	5.9e-31
WP_000339142.1|405176_405479_+|holin	phage holin	holin	A0A2I6PF56	Staphylococcus_phage	99.0	1.2e-47
WP_060585175.1|405489_406944_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A2K9VBR6	Staphylococcus_phage	98.3	1.7e-285
>prophage 2
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	2894543	799749	807569	2894543		Hokovirus(16.67%)	10	NA	NA
WP_060585210.1|799749_800805_-	two-component system sensor histidine kinase SaeS	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000149344.1|800804_801491_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001037805.1|801465_801939_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001093557.1|802279_802720_-	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_000637685.1|803000_803585_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001062968.1|803683_804397_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000941336.1|804400_804820_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_000446724.1|804821_805490_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000604516.1|805840_806434_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	44.0	3.1e-39
WP_001217786.1|806417_807569_+	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	36.1	2.1e-23
>prophage 3
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	2894543	819538	833854	2894543		uncultured_Caudovirales_phage(50.0%)	13	NA	NA
WP_000663034.1|819538_820597_+	histidinol-phosphate transaminase	NA	A0A0H3TLT9	Faustovirus	26.9	1.5e-20
WP_000197271.1|820755_821298_+	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000429003.1|822034_822952_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	2.8e-07
WP_014936998.1|823042_823150_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000193750.1|823221_824727_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_000930016.1|825066_825567_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	66.2	2.7e-52
WP_001068490.1|825586_826453_-	DMT family transporter	NA	NA	NA	NA	NA
WP_000692521.1|827254_827653_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_000855505.1|827615_829721_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000562498.1|829840_830812_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000876311.1|831181_832153_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	80.2	7.8e-141
WP_001245567.1|832139_833096_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.6e-05
WP_000616865.1|833092_833854_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	30.1	7.2e-17
>prophage 4
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	2894543	973505	996730	2894543	integrase	Streptococcus_phage(94.74%)	23	961962:961979	1001005:1001022
961962:961979	attL	GCGGGGCCCCAACACAGA	NA	NA	NA	NA
WP_000154905.1|973505_977159_+	helicase-exonuclease AddAB subunit AddA	NA	A7KV33	Bacillus_phage	24.7	7.0e-25
WP_000670757.1|977324_978227_+	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_000902814.1|978553_978943_+	YisL family protein	NA	NA	NA	NA	NA
WP_001291561.1|979207_980425_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
WP_000814511.1|980506_980710_-	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_000857133.1|981170_981401_-	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_000804885.1|981397_981820_-	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_001227347.1|982324_982678_+	helix-turn-helix domain-containing protein	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
WP_000336323.1|982737_982905_-	cysteine-rich KTR domain-containing protein	NA	D0R0F6	Streptococcus_phage	68.0	1.6e-14
WP_000691736.1|983023_984943_-	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	99.5	0.0e+00
WP_001814923.1|984958_985075_-	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_001224318.1|985319_986252_-	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	99.4	3.1e-171
WP_000769868.1|986248_987250_-	lysozyme family protein	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_060585220.1|987246_989424_-	hypothetical protein	NA	A0A1S5SF30	Streptococcus_phage	99.9	0.0e+00
WP_000331160.1|989426_991874_-	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
WP_000506270.1|991857_992364_-	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000342539.1|992338_992836_-	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_001009056.1|992952_993174_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000398284.1|993216_994422_-	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_000879507.1|994444_994597_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000813488.1|994599_995985_-	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000985015.1|996013_996400_-	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000420682.1|996415_996730_-	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
1001005:1001022	attR	TCTGTGTTGGGGCCCCGC	NA	NA	NA	NA
>prophage 5
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	2894543	1023654	1075767	2894543	protease,tRNA,transposase,integrase,holin	Staphylococcus_phage(25.0%)	52	1035518:1035538	1069926:1069946
WP_000448934.1|1023654_1024644_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000258003.1|1024938_1025334_+	transcriptional regulator Spx	NA	NA	NA	NA	NA
WP_001217731.1|1025704_1026424_+	adaptor protein MecA	NA	NA	NA	NA	NA
WP_000959279.1|1026544_1027531_+	competence protein CoiA	NA	NA	NA	NA	NA
WP_000082727.1|1027578_1029387_+	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.4	1.2e-46
WP_000896697.1|1029846_1030653_-|protease	protease adaptor protein YjbH	protease	NA	NA	NA	NA
WP_000214070.1|1030675_1031041_-	truncated hemoglobin	NA	NA	NA	NA	NA
WP_000224612.1|1031144_1031738_-	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_001242104.1|1031923_1032271_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001077683.1|1032287_1032923_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
WP_001270834.1|1032939_1033749_+	NAD kinase	NA	NA	NA	NA	NA
WP_000669942.1|1033745_1034600_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_000062407.1|1034620_1036006_+	magnesium transporter	NA	NA	NA	NA	NA
1035518:1035538	attL	ATTTTAACATTTTTAGGAATG	NA	NA	NA	NA
WP_000395153.1|1036015_1037860_+	monovalent cation:proton antiporter family protein	NA	NA	NA	NA	NA
WP_000933200.1|1038137_1038908_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_000933104.1|1039104_1040190_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_000570705.1|1040531_1042100_+	alanine:cation symporter family protein	NA	NA	NA	NA	NA
WP_000889181.1|1042241_1043000_+	esterase family protein	NA	NA	NA	NA	NA
WP_003756625.1|1043130_1043526_-	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	86.3	8.5e-62
WP_162887382.1|1043543_1044836_-	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	81.9	7.8e-189
WP_000120603.1|1044832_1045147_-	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	A0A2H4PQT4	Staphylococcus_phage	73.1	3.6e-39
WP_031588332.1|1045207_1045807_-	recombinase family protein	NA	E5FFF9	Burkholderia_phage	30.8	3.1e-15
WP_000164963.1|1045941_1046757_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_060585227.1|1046749_1048192_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_000690628.1|1048163_1048757_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	51.1	1.1e-41
WP_001284656.1|1049020_1049401_-	penicillinase repressor BlaI	NA	NA	NA	NA	NA
WP_001096374.1|1049390_1051148_-	beta-lactam sensor/signal transducer BlaR1	NA	NA	NA	NA	NA
WP_000733283.1|1051254_1052100_+	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NA	A0A1B0VBP7	Salmonella_phage	34.0	1.5e-31
WP_031588347.1|1052554_1052755_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031588348.1|1052787_1053108_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_041079216.1|1053197_1054082_+	permease	NA	NA	NA	NA	NA
WP_060585229.1|1054101_1055157_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_088401729.1|1055181_1055325_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078157160.1|1055364_1056834_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_031588352.1|1056826_1057663_+	AAA family ATPase	NA	A0A2K9VH00	Faecalibacterium_phage	23.9	1.1e-07
WP_031588353.1|1057682_1058243_+	recombinase family protein	NA	E5FFF9	Burkholderia_phage	31.3	1.3e-15
WP_000600387.1|1058488_1058998_+	YjcG family protein	NA	NA	NA	NA	NA
WP_001154224.1|1059110_1060301_-	MFS transporter	NA	NA	NA	NA	NA
WP_000258650.1|1060278_1061454_-	diglucosyl diacylglycerol synthase	NA	NA	NA	NA	NA
WP_000340124.1|1061884_1063369_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA	NA
WP_072434963.1|1063349_1063610_+	YueH family protein	NA	NA	NA	NA	NA
WP_001049947.1|1063609_1065172_+	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.0	3.8e-36
WP_000928413.1|1065473_1066277_+	TerC family protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
WP_014937014.1|1066495_1068820_+|protease	serine protease	protease	W5SAB9	Pithovirus	27.4	2.1e-11
WP_000021872.1|1068836_1070195_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
1069926:1069946	attR	ATTTTAACATTTTTAGGAATG	NA	NA	NA	NA
WP_000414168.1|1070333_1071845_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_000287265.1|1072333_1072903_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000876826.1|1073112_1073331_+	IDEAL domain-containing protein	NA	NA	NA	NA	NA
WP_000668814.1|1073411_1074398_-	lipoate--protein ligase	NA	NA	NA	NA	NA
WP_000214898.1|1074596_1074773_+	YkvS family protein	NA	NA	NA	NA	NA
WP_001033867.1|1074787_1075390_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_099119695.1|1075689_1075767_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
>prophage 6
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	2894543	1110746	1119219	2894543		Synechococcus_phage(33.33%)	9	NA	NA
WP_001807816.1|1110746_1111229_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
WP_001010409.1|1111215_1112340_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174055.1|1112343_1113048_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	2.1e-47
WP_000848351.1|1113047_1113311_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666799.1|1113312_1113984_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000032750.1|1113976_1116166_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.4	1.3e-140
WP_000483707.1|1116144_1117629_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	8.5e-46
WP_000030815.1|1117621_1118650_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.1	2.9e-61
WP_000238668.1|1118652_1119219_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	2.7e-29
>prophage 7
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	2894543	1375403	1380591	2894543		Staphylococcus_phage(66.67%)	8	NA	NA
WP_001807853.1|1375403_1375601_+	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	50.0	9.9e-11
WP_074347689.1|1376287_1376515_+	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	72.1	1.9e-18
WP_001002341.1|1376815_1377022_+	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	55.2	5.5e-12
WP_001788716.1|1377722_1377833_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000006110.1|1378225_1378411_+	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	78.7	2.4e-19
WP_000477489.1|1378921_1379338_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000974166.1|1379769_1380354_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	42.6	4.4e-30
WP_001215406.1|1380417_1380591_-	hypothetical protein	NA	A0A059NT83	Lactococcus_phage	51.9	3.6e-09
>prophage 8
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	2894543	1557123	1644570	2894543	plate,protease,tRNA,tail,capsid,terminase,integrase,head,holin,portal	Staphylococcus_phage(67.95%)	105	1592060:1592077	1641803:1641820
WP_000858789.1|1557123_1558416_-|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	30.0	1.9e-54
WP_000525056.1|1558737_1561431_-	ATP-dependent DNA helicase DinG	NA	A0A1X9I5C8	Streptococcus_phage	34.3	1.4e-46
WP_000049916.1|1561454_1562426_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_000361538.1|1562412_1563615_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	43.3	7.1e-35
WP_000690021.1|1563619_1564762_-	N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA	NA	NA	NA	NA	NA
WP_000839926.1|1565005_1565323_-	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_031774809.1|1565657_1566338_-	zinc metallopeptidase	NA	NA	NA	NA	NA
WP_000154694.1|1566409_1566997_-	DUF1405 domain-containing protein	NA	NA	NA	NA	NA
WP_000005220.1|1566986_1567562_-	YpiB family protein	NA	G3MAV7	Bacillus_virus	27.2	1.6e-08
WP_000389530.1|1567575_1568820_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000245908.1|1568826_1570125_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_000776339.1|1570134_1571199_-	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_001269939.1|1571224_1572391_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.3	2.6e-34
WP_000789522.1|1572777_1572978_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000442480.1|1573183_1573633_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
WP_001096479.1|1573724_1574684_-	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
WP_000774681.1|1574685_1575411_-	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
WP_000450555.1|1575413_1575986_-	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA	NA
WP_001043863.1|1576416_1576689_-	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
WP_000161737.1|1576859_1577858_-	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_000165530.1|1577874_1579185_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_000133960.1|1579406_1580582_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_001825307.1|1580838_1581030_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001807839.1|1581146_1581263_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000644390.1|1581293_1581953_-	(d)CMP kinase	NA	NA	NA	NA	NA
WP_000681742.1|1582029_1582998_+	asparaginase	NA	NA	NA	NA	NA
WP_001174257.1|1583112_1584099_-	YpdA family putative bacillithiol disulfide reductase	NA	NA	NA	NA	NA
WP_001807838.1|1584259_1584376_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000069278.1|1584501_1585956_-	elastin-binding protein EbpS	NA	NA	NA	NA	NA
WP_000902104.1|1586108_1587488_-	ATP-dependent DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	33.3	6.4e-56
WP_001163801.1|1587477_1588431_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_001151997.1|1588538_1588787_+	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
WP_001186909.1|1588892_1589438_-	ECF transporter S component	NA	NA	NA	NA	NA
WP_001825312.1|1589841_1590774_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_001807840.1|1591228_1592125_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
1592060:1592077	attL	TTCCATCGTGGAACATCC	NA	NA	NA	NA
WP_001825313.1|1592179_1593109_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000126130.1|1593199_1593415_-	hypothetical protein	NA	A0ZS61	Staphylococcus_virus	100.0	2.0e-25
WP_016187462.1|1593630_1594047_-	hypothetical protein	NA	M9QRV7	Staphylococcus_phage	100.0	6.4e-76
WP_000455172.1|1594018_1594546_-	DUF4065 domain-containing protein	NA	M9QX37	Staphylococcus_phage	99.4	1.3e-97
WP_031795408.1|1594567_1594747_-	hypothetical protein	NA	C8CH39	Staphylococcus_phage	100.0	7.8e-23
WP_060585267.1|1595437_1596892_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A0N6WMR3	Staphylococcus_phage	97.7	1.5e-284
WP_000339144.1|1596903_1597206_-|holin	phage holin	holin	B7T0L0	Staphylococcus_virus	100.0	4.1e-48
WP_000466784.1|1597341_1597641_-	DUF2951 domain-containing protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
WP_016187456.1|1597686_1597851_-	XkdX family protein	NA	M9QX31	Staphylococcus_phage	100.0	3.8e-24
WP_001166606.1|1597843_1598233_-	DUF2977 domain-containing protein	NA	Q4ZCZ7	Staphylococcus_virus	95.3	5.4e-61
WP_031584731.1|1598232_1599699_-|plate	phage baseplate upper protein	plate	A0A2I6PE72	Staphylococcus_phage	99.8	3.4e-273
WP_000429552.1|1599698_1601609_-	hypothetical protein	NA	A0A2K9VBU3	Staphylococcus_phage	100.0	0.0e+00
WP_000179860.1|1601624_1601915_-	hypothetical protein	NA	A0A2I6PF46	Staphylococcus_phage	100.0	2.1e-49
WP_000384462.1|1601914_1603498_-|tail	phage tail protein	tail	Q8SDP1	Staphylococcus_virus	100.0	7.1e-309
WP_001190533.1|1603506_1604331_-|tail	phage tail family protein	tail	A0A2I6PER3	Staphylococcus_phage	100.0	4.1e-159
WP_060585173.1|1604330_1610531_-|tail	phage tail tape measure protein	tail	A0A1X9IGU9	Staphylococcus_phage	99.7	0.0e+00
WP_000438833.1|1610544_1610703_-	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
WP_000589167.1|1610744_1611095_-	hypothetical protein	NA	A0A2I6PEQ2	Staphylococcus_phage	100.0	1.1e-55
WP_000169128.1|1611152_1611608_-	Ig domain-containing protein	NA	A0A2I6PF45	Staphylococcus_phage	100.0	1.3e-77
WP_000807540.1|1611699_1612341_-|tail	tail protein	tail	A0A2I6PE59	Staphylococcus_phage	100.0	1.0e-120
WP_001023802.1|1612375_1612771_-	DUF3168 domain-containing protein	NA	A0A2I6PDD8	Staphylococcus_phage	100.0	2.6e-66
WP_000110020.1|1612771_1613173_-	hypothetical protein	NA	A0A2I6PDD3	Staphylococcus_phage	100.0	6.2e-68
WP_000395505.1|1613169_1613502_-	hypothetical protein	NA	A0A2I6PDD6	Staphylococcus_phage	99.1	2.4e-57
WP_000050975.1|1613513_1613792_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2I6PE36	Staphylococcus_phage	100.0	2.1e-46
WP_001142735.1|1613860_1615024_-|capsid	phage major capsid protein	capsid	A0A2I6PE62	Staphylococcus_phage	100.0	3.6e-217
WP_000061868.1|1615035_1615809_-|protease	Clp protease ClpP	protease	A0A2I6PE26	Staphylococcus_phage	100.0	4.9e-138
WP_001100670.1|1615792_1617031_-|portal	phage portal protein	portal	A0A2I6PEA6	Staphylococcus_phage	100.0	6.9e-235
WP_000153551.1|1617035_1618727_-|terminase	terminase large subunit	terminase	A0A2I6PE99	Staphylococcus_phage	99.8	0.0e+00
WP_000778933.1|1618716_1619022_-|terminase	P27 family phage terminase small subunit	terminase	A0A2I6PEQ6	Staphylococcus_phage	100.0	2.9e-49
WP_000160689.1|1619149_1619464_-	HNH endonuclease	NA	A0A2I6PDC4	Staphylococcus_phage	100.0	2.5e-56
WP_001793488.1|1620059_1621427_-	DEAD/DEAH box helicase	NA	A0A2I6PE95	Staphylococcus_phage	100.0	1.7e-263
WP_000665203.1|1621407_1621698_-	VRR-NUC domain-containing protein	NA	A0A2I6PEN7	Staphylococcus_phage	100.0	6.5e-51
WP_015978074.1|1621831_1621936_+	hypothetical protein	NA	A0A2I6PDP6	Staphylococcus_phage	100.0	2.7e-12
WP_000265258.1|1623489_1623690_-	DUF1514 family protein	NA	A0A2I6PF41	Staphylococcus_phage	100.0	2.9e-26
WP_000237866.1|1623757_1623910_-	transcriptional activator RinB	NA	A0A2I6PF16	Staphylococcus_phage	98.0	5.8e-19
WP_001125015.1|1623912_1624113_-	hypothetical protein	NA	A0A2I6PF22	Staphylococcus_phage	100.0	1.8e-28
WP_000195837.1|1624087_1624276_-	DUF1381 domain-containing protein	NA	Q4ZCG4	Staphylococcus_virus	100.0	1.6e-26
WP_031913925.1|1624312_1624846_-	dUTP pyrophosphatase	NA	Q4ZDW8	Staphylococcus_virus	95.5	5.3e-91
WP_001065072.1|1624838_1625087_-	DUF1024 family protein	NA	Q9B0F3	Staphylococcus_virus	98.8	7.0e-38
WP_000144708.1|1625079_1625388_-	hypothetical protein	NA	Q4ZBK6	Staphylococcus_phage	100.0	8.1e-52
WP_000979209.1|1625384_1625732_-	hypothetical protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
WP_000695759.1|1625728_1626130_-	hypothetical protein	NA	A0A0N7E0T5	Staphylococcus_phage	100.0	7.0e-72
WP_060585271.1|1626132_1626339_-	hypothetical protein	NA	B7T0H4	Staphylococcus_virus	98.5	1.0e-34
WP_015994747.1|1626352_1627042_-	N-6 DNA methylase	NA	B7T0H3	Staphylococcus_virus	100.0	6.1e-132
WP_015994746.1|1627038_1627239_-	hypothetical protein	NA	B7T0H2	Staphylococcus_virus	100.0	3.7e-29
WP_060585274.1|1627241_1627499_-	DUF3310 domain-containing protein	NA	B5WZM8	Staphylococcus_phage	98.8	7.5e-43
WP_031911823.1|1627498_1627858_-	phage protein	NA	Q4ZBU0	Staphylococcus_virus	98.3	2.2e-61
WP_001187249.1|1627858_1628044_-	DUF3113 family protein	NA	A0A0N9BBI1	Staphylococcus_phage	95.1	6.0e-26
WP_000152769.1|1628043_1628199_-	hypothetical protein	NA	A0A2I6PDP0	Staphylococcus_phage	94.1	3.5e-19
WP_076050776.1|1628210_1630163_-	DNA polymerase	NA	A0A2I6PE86	Staphylococcus_phage	99.7	0.0e+00
WP_000645045.1|1630230_1630788_-	DUF2815 family protein	NA	A0A2K9VBT2	Staphylococcus_phage	100.0	1.8e-97
WP_000762545.1|1630813_1631980_-	DUF2800 domain-containing protein	NA	A7TWG4	Staphylococcus_phage	99.7	7.0e-221
WP_000985976.1|1631976_1632339_-	hypothetical protein	NA	A0A2I6PF03	Staphylococcus_phage	100.0	4.9e-56
WP_000174994.1|1632353_1632677_-	hypothetical protein	NA	A0A2I6PF12	Staphylococcus_phage	100.0	5.9e-53
WP_001285948.1|1632755_1632917_-	DUF1270 domain-containing protein	NA	A9CR58	Staphylococcus_phage	98.1	1.1e-20
WP_001124198.1|1632929_1633193_-	helix-turn-helix domain-containing protein	NA	A0A2I6PEL8	Staphylococcus_phage	100.0	2.5e-46
WP_001097552.1|1633217_1633433_-	hypothetical protein	NA	A0A2I6PF01	Staphylococcus_phage	100.0	1.9e-31
WP_016170627.1|1633487_1633853_+	hypothetical protein	NA	A0A2I6PF07	Staphylococcus_phage	99.2	1.2e-62
WP_001025401.1|1633821_1634067_-	DUF2829 domain-containing protein	NA	A0A2I6PF15	Staphylococcus_phage	100.0	5.1e-41
WP_031796638.1|1634095_1634872_-	Rha family transcriptional regulator	NA	A0A2I6PD87	Staphylococcus_phage	89.5	4.0e-124
WP_015978369.1|1634894_1635122_-	helix-turn-helix transcriptional regulator	NA	Q4ZB05	Staphylococcus_virus	100.0	1.6e-36
WP_029549401.1|1635275_1635905_+	LexA family transcriptional regulator	NA	Q4ZB06	Staphylococcus_virus	99.0	6.4e-112
WP_031796639.1|1635961_1636558_+	hypothetical protein	NA	A0A2I6PD77	Staphylococcus_phage	94.4	2.6e-62
WP_001795334.1|1636787_1636934_+	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	100.0	1.2e-16
WP_000191466.1|1636930_1637545_-	hypothetical protein	NA	A0A2I6PEZ0	Staphylococcus_phage	100.0	6.7e-106
WP_031585161.1|1637670_1638876_+|integrase	site-specific integrase	integrase	A0A2I6PEN0	Staphylococcus_phage	99.8	3.8e-222
WP_060585277.1|1638918_1640946_-	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	94.8	1.0e-110
WP_001825329.1|1640938_1641868_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
1641803:1641820	attR	TTCCATCGTGGAACATCC	NA	NA	NA	NA
WP_000987760.1|1642112_1643864_-	two-component system sensor histidine kinase SrrB	NA	A0A1V0SGX0	Hokovirus	33.3	1.3e-21
WP_000064078.1|1643844_1644570_-	two-component system response regulator SrrA	NA	W8CYM9	Bacillus_phage	43.0	3.5e-45
>prophage 9
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	2894543	1699692	1708004	2894543	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
WP_001213908.1|1699692_1700478_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000924214.1|1700603_1701494_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
WP_001062170.1|1701503_1702850_-	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	33.7	3.4e-54
WP_000683941.1|1702963_1704064_-	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	30.6	1.0e-08
WP_000624563.1|1704066_1704744_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_001283055.1|1704874_1705981_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_001217255.1|1706204_1708004_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	3.5e-54
>prophage 10
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	2894543	1777428	1786471	2894543	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_000364542.1|1777428_1777947_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_000595008.1|1777968_1780242_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	2.1e-64
WP_000749801.1|1780444_1782724_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_001160682.1|1782998_1783259_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_001112045.1|1783277_1784417_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001019177.1|1784439_1785465_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005766.1|1785466_1786471_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 11
NZ_CP013621	Staphylococcus aureus strain RIVM3897 chromosome, complete genome	2894543	1916893	2019726	2894543	plate,protease,tRNA,transposase,tail,capsid,portal,integrase,head,holin,terminase	Staphylococcus_phage(82.86%)	125	2016293:2016309	2024505:2024521
WP_001050515.1|1916893_1923442_-	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	95.1	5.7e-296
WP_000836471.1|1923765_1924077_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	95.1	1.3e-49
WP_001807819.1|1924098_1926516_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.1	0.0e+00
WP_001025064.1|1926803_1927985_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.7	9.6e-218
WP_000526541.1|1928094_1929048_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	99.3	6.4e-79
WP_000764426.1|1929044_1929608_+	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	95.7	7.3e-99
WP_000757543.1|1929726_1930128_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000266096.1|1930700_1931528_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_014937042.1|1931530_1931650_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196354.1|1931761_1932763_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
WP_001008555.1|1932890_1933349_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	97.4	4.1e-68
WP_001159034.1|1933361_1934543_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	1.9e-226
WP_000493892.1|1934553_1935186_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	99.5	1.7e-112
WP_000077346.1|1935192_1936236_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	99.1	3.1e-196
WP_001261672.1|1936716_1938219_-	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	5.0e-30
WP_000221190.1|1938861_1939176_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	1.3e-52
WP_000989103.1|1939175_1940468_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	94.7	7.5e-216
WP_001032832.1|1940554_1941409_-	glucosaminidase domain-containing protein	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000384171.1|1941684_1941909_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000671058.1|1942107_1942578_+	RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	84.6	5.0e-69
WP_001153741.1|1942690_1943134_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030474.1|1943120_1943564_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	77.9	1.4e-49
WP_001168915.1|1943861_1944497_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_060585305.1|1944663_1945284_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_001096494.1|1945846_1946560_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_000091443.1|1946818_1947121_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200546.1|1947375_1947741_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	98.3	6.9e-58
WP_000623484.1|1947737_1948091_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	82.1	2.3e-18
WP_000453302.1|1948340_1949174_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	98.9	1.7e-157
WP_000366160.1|1949385_1950294_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	99.3	1.3e-137
WP_000933822.1|1950418_1951612_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
WP_060585307.1|1951983_1953576_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	99.4	5.9e-312
WP_016187361.1|1953872_1954619_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.0	7.8e-141
WP_000672013.1|1954623_1955097_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	7.2e-84
WP_000718107.1|1955162_1955420_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000778553.1|1955416_1956418_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	86.5	3.3e-163
WP_000348381.1|1956422_1957901_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	95.5	6.7e-277
WP_016187363.1|1958059_1958515_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	96.6	8.3e-77
WP_001825423.1|1958817_1959480_+	excalibur calcium-binding domain-containing protein	NA	A0A2H4PQM8	Staphylococcus_phage	87.7	2.8e-49
WP_000070644.1|1959560_1960556_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	94.8	1.3e-69
WP_000669036.1|1960631_1961258_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	84.1	9.9e-81
WP_000627549.1|1961298_1961643_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	96.5	5.1e-55
WP_000414230.1|1961740_1962313_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	3.5e-24
WP_000864133.1|1962510_1963068_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4PQN8	Staphylococcus_phage	98.1	1.1e-78
WP_000375476.1|1963438_1963615_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000070813.1|1963625_1964009_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000196442.1|1964457_1964739_-|transposase	IS3 family transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	63.4	3.2e-23
WP_000731425.1|1964981_1965425_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_000747800.1|1965424_1965868_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_000221417.1|1966402_1968826_+	polysaccharide lyase 8 family protein	NA	NA	NA	NA	NA
WP_001034579.1|1968951_1969329_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_000439997.1|1969537_1969981_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_000877848.1|1970023_1970329_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014532497.1|1970398_1970788_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000566444.1|1970767_1971412_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	46.6	4.6e-49
WP_031838316.1|1971546_1972782_-|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	48.9	8.2e-103
WP_001826297.1|1974044_1974194_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000825946.1|1974360_1974825_+	hypothetical protein	NA	A0EWV3	Staphylococcus_phage	92.2	4.0e-26
WP_017804629.1|1976298_1976502_-	hypothetical protein	NA	Q4ZBW5	Staphylococcus_virus	62.7	1.8e-15
WP_031911800.1|1977045_1978491_-	SH3 domain-containing protein	NA	S4V6E6	Staphylococcus_phage	98.5	7.2e-292
WP_031911801.1|1978471_1978909_-|holin	phage holin	holin	A0A2H4PQP0	Staphylococcus_phage	98.6	2.0e-72
WP_031911802.1|1978964_1981559_-|plate	BppU family phage baseplate upper protein	plate	Q4ZC48	Staphylococcus_virus	56.8	1.6e-273
WP_031911803.1|1981571_1983446_-	glucosaminidase domain-containing protein	NA	A0A2I6PCX0	Staphylococcus_phage	97.9	0.0e+00
WP_000466752.1|1983582_1983882_-	DUF2951 family protein	NA	B7T0E7	Staphylococcus_virus	100.0	2.5e-42
WP_001800921.1|1983922_1984096_-	XkdX family protein	NA	A0A059T7K6	Staphylococcus_phage	100.0	1.3e-27
WP_016187285.1|1984105_1984483_-	DUF2977 domain-containing protein	NA	M9NRJ7	Staphylococcus_phage	100.0	1.1e-61
WP_031911804.1|1984482_1986306_-|plate	phage baseplate upper protein	plate	Q4ZDD5	Staphylococcus_virus	96.2	6.3e-285
WP_031911805.1|1986305_1988204_-	hypothetical protein	NA	M9NSU3	Staphylococcus_phage	96.2	0.0e+00
WP_031912270.1|1988216_1990103_-|tail	phage tail protein	tail	A0A059T677	Staphylococcus_phage	99.2	0.0e+00
WP_031911807.1|1990113_1991055_-|tail	phage tail family protein	tail	A0A059T7K5	Staphylococcus_phage	98.7	9.1e-179
WP_031911808.1|1991069_1993955_-|terminase	terminase	terminase	M9NRJ5	Staphylococcus_phage	98.7	0.0e+00
WP_031911809.1|1993958_1994243_-	hypothetical protein	NA	A0A059T626	Staphylococcus_phage	97.9	3.4e-44
WP_000134336.1|1994287_1994800_-	hypothetical protein	NA	A0A059T5B1	Staphylococcus_phage	100.0	5.4e-93
WP_000057585.1|1994866_1995424_-	hypothetical protein	NA	A0A059T675	Staphylococcus_phage	100.0	4.1e-102
WP_000270192.1|1995424_1995850_-	DUF3168 domain-containing protein	NA	Q4ZBQ9	Staphylococcus_phage	100.0	5.5e-75
WP_031911810.1|1995862_1996270_-	HK97 gp10 family phage protein	NA	A0A059T7Q2	Staphylococcus_phage	97.0	8.4e-73
WP_031911811.1|1996256_1996592_-|head	phage head closure protein	head	Q4ZBR2	Staphylococcus_phage	98.2	9.7e-59
WP_000177353.1|1996603_1996954_-|head,tail	phage head-tail adapter protein	head,tail	A0A0H3U2R5	Staphylococcus_phage	99.1	3.2e-60
WP_000002930.1|1996959_1997103_-	hypothetical protein	NA	A0A059T673	Staphylococcus_phage	100.0	7.9e-18
WP_000235170.1|1997114_1998029_-|capsid	phage major capsid protein	capsid	A0A059T7K3	Staphylococcus_phage	99.3	1.3e-169
WP_031911812.1|1998045_1998630_-	DUF4355 domain-containing protein	NA	A0A059T7Q0	Staphylococcus_phage	97.4	2.1e-72
WP_031911813.1|1998734_1998968_-	hypothetical protein	NA	M9NUJ2	Staphylococcus_phage	98.7	7.3e-37
WP_000184140.1|1998971_1999922_-|capsid	minor capsid protein	capsid	M9NST7	Staphylococcus_phage	100.0	2.3e-177
WP_031911814.1|1999890_2001315_-|portal	phage portal protein	portal	A0A0E3T9I6	Staphylococcus_phage	99.4	5.3e-271
WP_031911815.1|2001311_2002535_-|terminase	PBSX family phage terminase large subunit	terminase	A0A0N9BAX9	Staphylococcus_phage	99.0	4.6e-239
WP_000594090.1|2002527_2003022_-|terminase	terminase small subunit	terminase	A0A059T7P8	Staphylococcus_phage	97.6	5.4e-74
WP_031911817.1|2003377_2003779_-	hypothetical protein	NA	A0A2H4PQK5	Staphylococcus_phage	98.5	8.9e-67
WP_031765539.1|2003795_2003942_-	hypothetical protein	NA	A0A059T5A8	Staphylococcus_phage	97.9	3.7e-15
WP_031911818.1|2003942_2004308_-	hypothetical protein	NA	I1W652	Staphylococcus_phage	99.2	6.2e-59
WP_000595257.1|2004308_2004482_-	transcriptional activator RinB	NA	Q4ZBK0	Staphylococcus_phage	100.0	6.4e-22
WP_193391726.1|2004478_2004868_-	hypothetical protein	NA	A7TWI1	Staphylococcus_phage	97.7	1.7e-62
WP_060585313.1|2004857_2005094_-	hypothetical protein	NA	Q4ZA37	Staphylococcus_virus	84.6	9.3e-32
WP_060585316.1|2005077_2005296_-	DUF1381 domain-containing protein	NA	Q4ZA38	Staphylococcus_virus	86.1	1.0e-16
WP_000185680.1|2005332_2005869_-	dUTP diphosphatase	NA	A0A1P8L6E0	Staphylococcus_phage	100.0	2.1e-95
WP_001065062.1|2005861_2006110_-	DUF1024 family protein	NA	A7TWB0	Staphylococcus_phage	100.0	1.8e-38
WP_060585319.1|2006102_2006411_-	hypothetical protein	NA	Q4ZBK6	Staphylococcus_phage	99.0	2.4e-51
WP_000979209.1|2006407_2006755_-	hypothetical protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
WP_000695759.1|2006751_2007153_-	hypothetical protein	NA	A0A0N7E0T5	Staphylococcus_phage	100.0	7.0e-72
WP_031911821.1|2007155_2007362_-	hypothetical protein	NA	A0A0N9BAW9	Staphylococcus_phage	91.2	9.0e-31
WP_078100129.1|2007375_2007624_-	hypothetical protein	NA	A0A0K1LL46	Staphylococcus_phage	96.3	1.2e-40
WP_031867833.1|2007623_2007878_-	DUF3310 domain-containing protein	NA	A0A059T7J9	Staphylococcus_phage	98.8	3.7e-42
WP_031911823.1|2007877_2008237_-	phage protein	NA	Q4ZBU0	Staphylococcus_virus	98.3	2.2e-61
WP_031911824.1|2008237_2008423_-	DUF3113 family protein	NA	Q8SDV9	Staphylococcus_phage	95.1	6.0e-26
WP_031911825.1|2008422_2008830_-	RusA family crossover junction endodeoxyribonuclease	NA	A9CR74	Staphylococcus_phage	98.5	4.2e-72
WP_001123688.1|2008839_2009061_-	DUF3269 family protein	NA	Q9G021	Staphylococcus_phage	100.0	1.3e-35
WP_001024404.1|2009063_2009279_-	hypothetical protein	NA	Q4ZA49	Staphylococcus_virus	100.0	6.3e-35
WP_031911826.1|2009275_2010517_-	AAA family ATPase	NA	Q4ZA50	Staphylococcus_virus	99.5	4.4e-229
WP_031911827.1|2010513_2010870_-	hypothetical protein	NA	M9NS37	Staphylococcus_phage	99.2	1.8e-63
WP_031911828.1|2010869_2011622_-	DnaD domain protein	NA	C8CGZ1	Staphylococcus_phage	88.0	1.3e-119
WP_031911829.1|2011614_2012286_-	phi PV83 orf 19-like protein	NA	Q9G025	Staphylococcus_virus	97.8	2.9e-126
WP_031911830.1|2012298_2012850_-	hypothetical protein	NA	Q4ZBM4	Staphylococcus_phage	99.5	1.7e-100
WP_001288247.1|2012879_2013653_-	AAA family ATPase	NA	A0EWP9	Staphylococcus_virus	100.0	1.6e-141
WP_031911831.1|2013652_2014132_-	siphovirus Gp157 family protein	NA	A0A0H4J328	Staphylococcus_phage	99.4	3.1e-82
WP_031911832.1|2014124_2014361_-	hypothetical protein	NA	D2JGJ9	Staphylococcus_phage	83.3	4.5e-34
WP_031874257.1|2014369_2014630_-	DUF1108 family protein	NA	A1KX65	Staphylococcus_virus	98.8	2.0e-43
WP_031911833.1|2014634_2014937_-	DUF2482 family protein	NA	A0A0F6N3N3	Staphylococcus_phage	98.0	2.0e-47
WP_031911834.1|2015029_2015191_-	DUF1270 family protein	NA	A9CR58	Staphylococcus_phage	98.1	2.5e-20
WP_000455728.1|2015204_2015414_-	hypothetical protein	NA	A0A2H4PQR1	Staphylococcus_phage	100.0	9.7e-33
WP_031911835.1|2015438_2016140_-	ORF6C domain-containing protein	NA	W5R8M8	Staphylococcus_phage	99.1	5.1e-126
WP_001114715.1|2016178_2016388_-	helix-turn-helix transcriptional regulator	NA	A0A059T617	Staphylococcus_phage	100.0	4.8e-32
2016293:2016309	attL	TTTAGTAACGCCTAATT	NA	NA	NA	NA
WP_031911836.1|2016550_2016877_+	helix-turn-helix transcriptional regulator	NA	A0A059T5A2	Staphylococcus_phage	99.1	2.0e-53
WP_060585322.1|2016898_2017372_+	toxin	NA	A0A059T660	Staphylococcus_phage	99.3	7.2e-84
WP_031911838.1|2017374_2018358_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_031900793.1|2018368_2018611_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000146088.1|2018676_2019726_+|integrase	site-specific integrase	integrase	A0A2H4JB53	uncultured_Caudovirales_phage	90.3	5.2e-183
2024505:2024521	attR	TTTAGTAACGCCTAATT	NA	NA	NA	NA
