assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001465255.1_ASM146525v1	NZ_CP013652	Paenibacillus naphthalenovorans strain 32O-Y chromosome, complete genome	1	696977-698005	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	DinG,DEDDh,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,csa3,cas14k,c2c9_V-U4,cas14j	 Type I-U?,Type I-C,Type I-U	GTCGCATCCCATGCGGATGCGTGGATTGAAAT,GTCGCATCCCATGCGGATGCGTGGATTGAAAT,GTCGCATCCCATGCGGATGCGTGGATTGAAAT	32,32,32	0	0	NA	NA	NA:NA:NA	15,15,15	15	TypeI-U?,TypeI-U,TypeI-C	DinG,DEDDh,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,csa3,cas14k,c2c9_V-U4,cas14j	NA,NA|67aa|down_5|NZ_CP013652.1_703199_703400_+	NA|351aa|up_9|NZ_CP013652.1_685126_686179_+	cd07012, PBP2_Bug_TTT, Bug (Bordetella uptake gene) protein family of periplasmic solute-binding receptors; contains the type 2 periplasmic binding fold	NA|154aa|up_8|NZ_CP013652.1_686262_686724_+	pfam07331, TctB, Tripartite tricarboxylate transporter TctB family	NA|509aa|up_7|NZ_CP013652.1_686736_688263_+	COG3333, COG3333, Uncharacterized protein conserved in bacteria [Function unknown]	cas3|809aa|up_6|NZ_CP013652.1_688661_691088_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|240aa|up_5|NZ_CP013652.1_691274_691994_+	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG	cas8c|631aa|up_4|NZ_CP013652.1_691990_693883_+	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas7|287aa|up_3|NZ_CP013652.1_693898_694759_+	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas4|220aa|up_2|NZ_CP013652.1_694748_695408_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas1|344aa|up_1|NZ_CP013652.1_695404_696436_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_0|NZ_CP013652.1_696516_696807_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|321aa|down_0|NZ_CP013652.1_698781_699744_+	TIGR03211, catechol_2_3, catechol 2,3 dioxygenase	NA|279aa|down_1|NZ_CP013652.1_699803_700640_+	TIGR03343, 2-hydroxy-6-oxo-6-phenylhexa-24-dienoate_hydrolase, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase	NA|233aa|down_2|NZ_CP013652.1_700629_701328_+	COG1802, GntR, Transcriptional regulators [Transcription]	NA|432aa|down_3|NZ_CP013652.1_701377_702673_+	cd08881, RHO_alpha_C_NDO-like, C-terminal catalytic domain of the oxygenase alpha subunit of naphthalene 1,2-dioxygenase (NDO) and related aromatic ring hydroxylating dioxygenases	NA|168aa|down_4|NZ_CP013652.1_702665_703169_+	cd00667, ring_hydroxylating_dioxygenases_beta, Ring hydroxylating dioxygenase beta subunit	NA|67aa|down_5|NZ_CP013652.1_703199_703400_+	NA	NA|162aa|down_6|NZ_CP013652.1_703513_703999_+	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]	NA|147aa|down_7|NZ_CP013652.1_704055_704496_-	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]	NA|572aa|down_8|NZ_CP013652.1_704786_706502_+	PRK12451, PRK12451, arginyl-tRNA synthetase; Reviewed	NA|65aa|down_9|NZ_CP013652.1_706576_706771_+	pfam14038, YqzE, YqzE-like protein
GCF_001465255.1_ASM146525v1	NZ_CP013652	Paenibacillus naphthalenovorans strain 32O-Y chromosome, complete genome	2	3553741-3553950	2	CRT	no		DinG,DEDDh,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,csa3,cas14k,c2c9_V-U4,cas14j	Orphan	CCCNGGCGGACAGCCGGG	18	0	0	NA	NA	NA	4	4	Orphan	DinG,DEDDh,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,csa3,cas14k,c2c9_V-U4,cas14j	NA|71aa|up_8|NZ_CP013652.1_3546467_3546680_+,NA|376aa|down_8|NZ_CP013652.1_3561860_3562988_-	NA|398aa|up_9|NZ_CP013652.1_3545036_3546230_-	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|71aa|up_8|NZ_CP013652.1_3546467_3546680_+	NA	NA|288aa|up_7|NZ_CP013652.1_3546755_3547619_-	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs	NA|144aa|up_6|NZ_CP013652.1_3547794_3548226_-	COG1959, COG1959, Predicted transcriptional regulator [Transcription]	NA|197aa|up_5|NZ_CP013652.1_3548325_3548916_-	pfam12690, BsuPI, Intracellular proteinase inhibitor	NA|204aa|up_4|NZ_CP013652.1_3549238_3549850_-	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only]	NA|205aa|up_3|NZ_CP013652.1_3549884_3550499_-	COG0400, COG0400, Predicted esterase [General function prediction only]	NA|317aa|up_2|NZ_CP013652.1_3550495_3551446_-	cd08347, PcpA_C_like, C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins	NA|155aa|up_1|NZ_CP013652.1_3551495_3551960_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|267aa|up_0|NZ_CP013652.1_3552196_3552997_+	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily	NA|343aa|down_0|NZ_CP013652.1_3555256_3556285_-	TIGR02408, putative_L-proline_4-hydroxylase, ectoine hydroxylase	NA|134aa|down_1|NZ_CP013652.1_3556229_3556631_-	PRK13290, ectC, L-ectoine synthase; Reviewed	NA|434aa|down_2|NZ_CP013652.1_3556635_3557937_-	PRK09264, PRK09264, diaminobutyrate--2-oxoglutarate transaminase	NA|174aa|down_3|NZ_CP013652.1_3557973_3558495_-	TIGR02406, L-24-diaminobutyric_acid_acetyltransferase, diaminobutyrate acetyltransferase	NA|262aa|down_4|NZ_CP013652.1_3558510_3559296_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|221aa|down_5|NZ_CP013652.1_3559326_3559989_-	TIGR03003, ectoine_ehuD, ectoine/hydroxyectoine ABC transporter, permease protein EhuD	NA|218aa|down_6|NZ_CP013652.1_3559992_3560646_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|307aa|down_7|NZ_CP013652.1_3560647_3561568_-	cd01002, PBP2_Ehub_like, Substrate binding domain of ectoine/hydroxyectoine specific ABC transport system; the type 2 periplasmic binding protein fold	NA|376aa|down_8|NZ_CP013652.1_3561860_3562988_-	NA	NA|240aa|down_9|NZ_CP013652.1_3563161_3563881_+	pfam13649, Methyltransf_25, Methyltransferase domain
GCF_001465255.1_ASM146525v1	NZ_CP013652	Paenibacillus naphthalenovorans strain 32O-Y chromosome, complete genome	3	5034677-5034802	2	CRISPRCasFinder	no		DinG,DEDDh,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,csa3,cas14k,c2c9_V-U4,cas14j	Orphan	GAAGTATGAGAATTGCGATCCTGAGATTTTAACATTCAGGAACA	44	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,csa3,cas14k,c2c9_V-U4,cas14j	NA|69aa|up_5|NZ_CP013652.1_5031206_5031413_+,NA|66aa|down_1|NZ_CP013652.1_5041545_5041743_+,NA|157aa|down_3|NZ_CP013652.1_5042731_5043202_-,NA|239aa|down_6|NZ_CP013652.1_5045282_5045999_+	NA|477aa|up_9|NZ_CP013652.1_5026531_5027962_+	PRK01642, cls, cardiolipin synthetase; Reviewed	NA|303aa|up_8|NZ_CP013652.1_5028079_5028988_-	PRK09633, ligD, DNA ligase D	NA|317aa|up_7|NZ_CP013652.1_5029089_5030040_+	cd07906, Adenylation_DNA_ligase_LigD_LigC, Adenylation domain of Mycobacterium tuberculosis LigD and LigC-like ATP-dependent DNA ligases	NA|289aa|up_6|NZ_CP013652.1_5030152_5031019_-	cd00789, KU_like, Ku-core domain, Ku-like subfamily; composed of prokaryotic homologs of the eukaryotic DNA binding protein Ku	NA|69aa|up_5|NZ_CP013652.1_5031206_5031413_+	NA	NA|61aa|up_4|NZ_CP013652.1_5031409_5031592_+	pfam08141, SspH, Small acid-soluble spore protein H family	NA|348aa|up_3|NZ_CP013652.1_5031719_5032763_+	PRK05731, PRK05731, thiamine monophosphate kinase; Provisional	NA|158aa|up_2|NZ_CP013652.1_5032783_5033257_+	pfam02367, TsaE, Threonylcarbamoyl adenosine biosynthesis protein TsaE	NA|288aa|up_1|NZ_CP013652.1_5033253_5034117_+	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ	NA|165aa|up_0|NZ_CP013652.1_5034133_5034628_+	TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase	NA|349aa|down_0|NZ_CP013652.1_5034835_5035882_+	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	NA|66aa|down_1|NZ_CP013652.1_5041545_5041743_+	NA	NA|255aa|down_2|NZ_CP013652.1_5041831_5042596_-	COG3910, COG3910, Predicted ATPase [General function prediction only]	NA|157aa|down_3|NZ_CP013652.1_5042731_5043202_-	NA	NA|230aa|down_4|NZ_CP013652.1_5043296_5043986_-	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins	NA|283aa|down_5|NZ_CP013652.1_5044130_5044979_-	cd14667, 3D_containing_proteins, Non-mltA associated 3D domain containing proteins, named for 3 conserved aspartate residues	NA|239aa|down_6|NZ_CP013652.1_5045282_5045999_+	NA	NA|162aa|down_7|NZ_CP013652.1_5046369_5046855_+	pfam00731, AIRC, AIR carboxylase	NA|401aa|down_8|NZ_CP013652.1_5046851_5048054_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|432aa|down_9|NZ_CP013652.1_5048072_5049368_+	cd01360, Adenylsuccinate_lyase_1, Adenylsuccinate lyase (ASL)_subgroup 1
