assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001460855.1_MIDG2331	NZ_LN908249	Actinobacillus pleuropneumoniae serovar 8 isolate MIDG2331 chromosome I	1	238782-240009	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f	DEDDh,cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,csa3,DinG,cas3	Type I-F	TTTCTAAGCTGCCTATACGGCAGTGAAG,TTTCTAAGCTGCCTATACGGCAGTGAAG,TTTCTAAGCTGCCTATACGGCAGTGAAG	28,28,28	0	0	NA	NA	I-F:I-F:I-F	20,20,19	20	TypeI-F	DEDDh,cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,csa3,DinG,cas3	NA,NA	NA|158aa|up_9|NZ_LN908249.1_225353_225827_+	pfam04608, PgpA, Phosphatidylglycerophosphatase A	NA|209aa|up_8|NZ_LN908249.1_225839_226466_+	TIGR00949, Uncharacterized_membrane_protein_YahN, The Resistance to Homoserine/Threonine (RhtB) Family protein	NA|346aa|up_7|NZ_LN908249.1_226513_227551_-	PRK10864, PRK10864, putative methyltransferase; Provisional	NA|271aa|up_6|NZ_LN908249.1_227716_228529_+	PRK10757, PRK10757, inositol-1-monophosphatase	NA|618aa|up_5|NZ_LN908249.1_228649_230503_+	PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	NA|445aa|up_4|NZ_LN908249.1_230548_231882_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|422aa|up_3|NZ_LN908249.1_231970_233236_-	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed	NA|296aa|up_2|NZ_LN908249.1_233466_234354_-	PRK02231, ppnK, NAD(+) kinase	cas3-cas2|1116aa|up_1|NZ_LN908249.1_234444_237792_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|319aa|up_0|NZ_LN908249.1_237788_238745_-	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1	cas6f|190aa|down_0|NZ_LN908249.1_240150_240720_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|332aa|down_1|NZ_LN908249.1_240722_241718_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|320aa|down_2|NZ_LN908249.1_241719_242679_-	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas8f|450aa|down_3|NZ_LN908249.1_242675_244025_-	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	NA|644aa|down_4|NZ_LN908249.1_244474_246406_+	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed	NA|225aa|down_5|NZ_LN908249.1_246547_247222_+	COG1462, CsgG, Uncharacterized protein involved in formation of curli polymers [Cell envelope biogenesis, outer membrane]	NA|116aa|down_6|NZ_LN908249.1_247231_247579_+	pfam16068, DUF4810, Domain of unknown function (DUF4810)	NA|220aa|down_7|NZ_LN908249.1_247590_248250_+	pfam05643, DUF799, Putative bacterial lipoprotein (DUF799)	NA|181aa|down_8|NZ_LN908249.1_248464_249007_+	PRK00028, infC, translation initiation factor IF-3; Reviewed	NA|66aa|down_9|NZ_LN908249.1_249255_249453_+	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed
GCF_001460855.1_MIDG2331	NZ_LN908249	Actinobacillus pleuropneumoniae serovar 8 isolate MIDG2331 chromosome I	2	883997-884099	2	CRISPRCasFinder	no	DinG	DEDDh,cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,csa3,DinG,cas3	Type IV-A	GCTATGGGTTATTCTTAAACTCAGCGGGTGTAAAACT	37	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,csa3,DinG,cas3	NA,NA	NA|175aa|up_9|NZ_LN908249.1_872731_873256_+	PRK06863, PRK06863, single-stranded DNA-binding protein; Provisional	NA|300aa|up_8|NZ_LN908249.1_873465_874365_-	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|330aa|up_7|NZ_LN908249.1_874476_875466_+	cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|133aa|up_6|NZ_LN908249.1_875549_875948_-	cd04784, HTH_CadR-PbrR, Helix-Turn-Helix DNA binding domain of the CadR and PbrR transcription regulators	NA|205aa|up_5|NZ_LN908249.1_876019_876634_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|330aa|up_4|NZ_LN908249.1_876820_877810_+	cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|640aa|up_3|NZ_LN908249.1_877850_879770_-	pfam13175, AAA_15, AAA ATPase domain	NA|429aa|up_2|NZ_LN908249.1_879843_881130_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|296aa|up_1|NZ_LN908249.1_881437_882325_-	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|325aa|up_0|NZ_LN908249.1_882429_883404_+	cd04730, NPD_like, 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites	NA|256aa|down_0|NZ_LN908249.1_885415_886183_-	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown]	NA|346aa|down_1|NZ_LN908249.1_886266_887304_-	COG4170, SapD, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|296aa|down_2|NZ_LN908249.1_887317_888205_-	COG4171, SapC, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]	NA|321aa|down_3|NZ_LN908249.1_888194_889157_-	COG4168, SapB, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]	NA|566aa|down_4|NZ_LN908249.1_889156_890854_-	cd08493, PBP2_DppA_like, The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold	NA|383aa|down_5|NZ_LN908249.1_890863_892012_-	COG3283, TyrR, Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism]	NA|195aa|down_6|NZ_LN908249.1_892216_892801_+	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase	NA|537aa|down_7|NZ_LN908249.1_893015_894626_-	PRK09344, PRK09344, phosphoenolpyruvate carboxykinase	NA|93aa|down_8|NZ_LN908249.1_894898_895177_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|229aa|down_9|NZ_LN908249.1_895192_895879_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase
GCF_001460855.1_MIDG2331	NZ_LN908249	Actinobacillus pleuropneumoniae serovar 8 isolate MIDG2331 chromosome I	3	1759667-1759769	3	CRISPRCasFinder	no		DEDDh,cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,csa3,DinG,cas3	Orphan	GAGAATGCTTACCTAAAAAAGTTGCGGGAGTTCAACC	37	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,csa3,DinG,cas3	NA,NA	NA|453aa|up_9|NZ_LN908249.1_1748080_1749439_+	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA|452aa|up_8|NZ_LN908249.1_1749546_1750902_-	PRK05313, PRK05313, hypothetical protein; Provisional	NA|91aa|up_7|NZ_LN908249.1_1750914_1751187_-	PRK00194, PRK00194, ACT domain-containing protein	NA|230aa|up_6|NZ_LN908249.1_1751324_1752014_-	cd02910, cupin_Yhhw_N, Escherichia coli YhhW and YhaK and related proteins, pirin-like bicupin, N-terminal cupin domain	NA|190aa|up_5|NZ_LN908249.1_1752329_1752899_+	cd01043, DPS, DPS protein, ferritin-like diiron-binding domain	NA|101aa|up_4|NZ_LN908249.1_1753131_1753434_+	pfam13744, HTH_37, Helix-turn-helix domain	NA|455aa|up_3|NZ_LN908249.1_1753580_1754945_+	pfam01734, Patatin, Patatin-like phospholipase	NA|725aa|up_2|NZ_LN908249.1_1755012_1757187_-	TIGR01666, Uncharacterized_protein_HI_1680, TIGR01666 family membrane protein	NA|153aa|up_1|NZ_LN908249.1_1757268_1757727_-	PRK05234, mgsA, methylglyoxal synthase; Validated	NA|427aa|up_0|NZ_LN908249.1_1757859_1759140_+	PRK09225, PRK09225, threonine synthase; Validated	NA|955aa|down_0|NZ_LN908249.1_1760683_1763548_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|226aa|down_1|NZ_LN908249.1_1763563_1764241_-	cd09117, PLDc_Bfil_DEXD_like, Catalytic domain of type II restriction endonucleases BfiI and NgoFVII, and uncharacterized proteins with a DEAD domain	NA|193aa|down_2|NZ_LN908249.1_1765269_1765848_-	PRK10396, PRK10396, hypothetical protein; Provisional	NA|144aa|down_3|NZ_LN908249.1_1765849_1766281_-	COG2153, ElaA, Predicted acyltransferase [General function prediction only]	NA|146aa|down_4|NZ_LN908249.1_1766298_1766736_-	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|148aa|down_5|NZ_LN908249.1_1766987_1767431_+	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional	NA|434aa|down_6|NZ_LN908249.1_1767632_1768934_+	PRK01490, tig, trigger factor; Provisional	NA|150aa|down_7|NZ_LN908249.1_1769066_1769516_+	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|167aa|down_8|NZ_LN908249.1_1769540_1770041_+	PRK05751, PRK05751, preprotein translocase subunit SecB; Validated	NA|337aa|down_9|NZ_LN908249.1_1770225_1771236_+	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
