The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LN831039	Mycolicibacterium smegmatis strain NCTC8159 chromosome 1	6983267	92955	109292	6983267	transposase	Mycobacterium_phage(100.0%)	12	NA	NA
WP_058124893.1|92955_94323_+|transposase	ISL3-like element ISMsm4 family transposase	transposase	NA	NA	NA	NA
WP_157892482.1|94437_94719_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157892483.1|95244_96042_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162267853.1|96286_97219_+	hypothetical protein	NA	NA	NA	NA	NA
WP_058124896.1|99657_101220_+	type VII secretion system ESX-1 target EspB	NA	NA	NA	NA	NA
WP_058124897.1|101339_101633_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011726740.1|101900_102602_+	plasmid pRiA4b ORF-3 family protein	NA	A0A2H4PDG5	Mycobacterium_phage	99.6	2.0e-138
WP_011726739.1|102609_103932_-|transposase	ISL3-like element IS1096 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	100.0	1.1e-254
WP_058124898.1|105276_106680_-|transposase	IS1380 family transposase	transposase	NA	NA	NA	NA
WP_014877232.1|106855_107284_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_081319655.1|107283_108000_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_011727856.1|107972_109292_-|transposase	IS256 family transposase	transposase	A0A2P1JQX9	Mycobacterium_phage	100.0	2.8e-250
>prophage 2
NZ_LN831039	Mycolicibacterium smegmatis strain NCTC8159 chromosome 1	6983267	669488	742213	6983267	protease,integrase,transposase	Mycobacterium_phage(22.22%)	57	671027:671086	680371:681115
WP_058125120.1|669488_670892_+|transposase	IS1380 family transposase	transposase	NA	NA	NA	NA
671027:671086	attL	CTTAGCAACTTGGCAACTTGGCTTGATCTCGGGGCGAGAACGGAATCACCTGAACCATGA	NA	NA	NA	NA
WP_014877232.1|671082_671511_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_058125121.1|671510_671801_+	hypothetical protein	NA	NA	NA	NA	NA
WP_174519640.1|671952_672150_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157892491.1|672182_672827_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	A0A0P0I4A4	Acinetobacter_phage	32.0	2.2e-19
WP_011728521.1|672723_674124_-|transposase	IS30-like element ISMsm8 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.2	7.0e-34
WP_157892492.1|675363_675792_-	ester cyclase	NA	NA	NA	NA	NA
WP_157892493.1|676106_677333_+	cytochrome P450	NA	NA	NA	NA	NA
WP_058125126.1|677357_678602_-	MFS transporter	NA	NA	NA	NA	NA
WP_058125128.1|680557_681961_+|transposase	IS1380-like element ISMsm11 family transposase	transposase	NA	NA	NA	NA
680371:681115	attR	TCATGGTTCAGGTGATTCCGTTCTCGCCCCGAGATCAAGCCAAGTTGCCAAGTTGCTAAGTTGCTAAGCCTCGATCCACCGATGAATTGGCTGGTCGCAGGGTGTCGTGACGAGGAAAGTGCCTTCTGAGCTGTGATGATGAGTGTTCTCTAGGCACTTATCGGCACAACTTCGAAAGGCACTTCCGGTGAAAGTGTCCCATAGGTTCGCCGTGTCGTCGGCGGTCTTCGATGATGCCCATCTCGTGTCGTGCGCCGGGCTGGTGCCGGTGATGACGTTGGCGGCCCAGACCGGACTACCGAAGTTGTTGGCCGACAAGATTTCCATTCCGGCACCGAAGATCAAATCCGGCTCGGCGAATCCGTCCCCGAAGCTGACCACGGTGATCGCCGGCATGTGTGTCGGCGCGGACAGCATCGATGACCTCGACTTGGTTCGCGCCGGTGGCATGAAGACACTCTTTGGCGGTGTGTATGCACCGTCAACTGTTGGTACTTTGTTGCGGGAGTTCACCTTCGGACACGCCCGGCAGTTGGAGTCGGTCCTGCGTCATCATCTGGCCGCACTCTGTGCGCGGGTGGACCTGCTGCCCGGATCCGACACGGGGGCGTTCATCGACATCGACTCACTGCTGCGCCCGGTCTATGGCCACGCCAAACAGGGTGCCTCCTACGGGCATACCAAGATCGCTGGTAAGCAGGTTCTGCGTAAAGGGCTCTCCCCGTTGGCGACGACGATCAGCACC	NA	NA	NA	NA
WP_081319344.1|682833_684969_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_157892494.1|685231_685528_-	hypothetical protein	NA	NA	NA	NA	NA
WP_058125130.1|686199_687558_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	24.8	5.8e-17
WP_058125131.1|687604_689101_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_081319345.1|689168_690794_-	PucR family transcriptional regulator	NA	NA	NA	NA	NA
WP_157892495.1|690959_693272_+	LamG domain-containing protein	NA	NA	NA	NA	NA
WP_058125134.1|693364_694741_+	NADP-dependent succinic semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_058125135.1|695046_696189_+	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA	NA
WP_167350199.1|696269_696980_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_058125136.1|696983_698006_+	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
WP_081319347.1|698080_698413_-	WhiB family transcriptional regulator	NA	I6XD27	Mycobacterium_virus	45.9	2.0e-08
WP_058127514.1|698418_699309_-	pyridoxal 5'-phosphate synthase lyase subunit PdxS	NA	NA	NA	NA	NA
WP_058125137.1|699698_701339_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_058125138.1|703407_704847_+	APC family permease	NA	NA	NA	NA	NA
WP_058125139.1|705057_707253_+	hypothetical protein	NA	NA	NA	NA	NA
WP_058125140.1|707375_707714_+	cation transporter	NA	NA	NA	NA	NA
WP_157892497.1|707710_708049_+	QacE family quaternary ammonium compound efflux SMR transporter	NA	NA	NA	NA	NA
WP_157892498.1|708218_709550_-	MFS transporter	NA	NA	NA	NA	NA
WP_157892499.1|709735_710080_+	DUF861 domain-containing protein	NA	NA	NA	NA	NA
WP_081319350.1|710374_711796_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_058125142.1|711792_712245_+	flavodoxin domain-containing protein	NA	NA	NA	NA	NA
WP_081319351.1|712394_712652_+	DUF861 domain-containing protein	NA	NA	NA	NA	NA
WP_058125144.1|712785_713871_+	S-(hydroxymethyl)mycothiol dehydrogenase	NA	A0A0K0KVL7	Prochlorococcus_phage	31.1	2.3e-32
WP_058125145.1|713870_714494_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_058125146.1|714555_715782_-	cytochrome P450	NA	NA	NA	NA	NA
WP_058125147.1|715871_716777_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_058125148.1|716948_718070_+	ornithine cyclodeaminase	NA	NA	NA	NA	NA
WP_058125149.1|718098_719502_+	DUF4147 domain-containing protein	NA	NA	NA	NA	NA
WP_058125150.1|719523_720804_+	enolase	NA	W6LP63	Streptococcus_phage	37.3	5.6e-70
WP_081319352.1|721736_722696_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_058125151.1|722797_723706_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_058125152.1|723698_725090_+	carboxylesterase/lipase family protein	NA	S4VZJ7	Pandoravirus	33.3	6.5e-24
WP_058125153.1|725146_725779_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_058125154.1|725857_726763_+	DUF2236 domain-containing protein	NA	NA	NA	NA	NA
WP_081319354.1|726774_727206_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_058125156.1|727214_727472_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA	NA
WP_058127516.1|727570_728473_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_174519565.1|728602_730429_+	type VII secretion AAA-ATPase EccA	NA	V5UQM2	Mycobacterium_phage	41.0	7.1e-103
WP_058125158.1|730425_731982_+	type VII secretion protein EccB	NA	NA	NA	NA	NA
WP_058125159.1|731978_735956_+	type VII secretion protein EccCa	NA	NA	NA	NA	NA
WP_011727069.1|735952_736264_+	PE family protein	NA	NA	NA	NA	NA
WP_011727070.1|736265_737837_+	PPE family protein	NA	NA	NA	NA	NA
WP_011727071.1|737886_738180_+	type VII secretion system protein EsxG	NA	NA	NA	NA	NA
WP_003892041.1|738214_738502_+	WXG100 family type VII secretion target	NA	NA	NA	NA	NA
WP_174519641.1|738508_739396_+	ESX secretion-associated protein EspG	NA	NA	NA	NA	NA
WP_011727073.1|739398_740826_+	type VII secretion integral membrane protein EccD	NA	NA	NA	NA	NA
WP_058125160.1|740833_742213_+|protease	type VII secretion system ESX-3 serine protease mycosin MycP3	protease	V5UPA7	Mycobacterium_phage	43.3	2.6e-81
>prophage 3
NZ_LN831039	Mycolicibacterium smegmatis strain NCTC8159 chromosome 1	6983267	1227702	1251153	6983267	tail,capsid,portal	Mycobacterium_phage(80.0%)	24	NA	NA
WP_058125376.1|1227702_1228155_+	hypothetical protein	NA	A0A068F4F6	Mycobacterium_phage	84.7	5.0e-58
WP_157892511.1|1228147_1230961_+	hypothetical protein	NA	A0A2P1A0R0	Gordonia_phage	43.5	3.3e-200
WP_058125378.1|1230957_1232397_+|portal	phage portal protein	portal	A0A068F3B8	Mycobacterium_phage	42.0	2.7e-89
WP_157892512.1|1232400_1233090_+	hypothetical protein	NA	A0A142KBU1	Gordonia_phage	28.4	1.3e-17
WP_157892513.1|1233131_1233614_+	hypothetical protein	NA	A0A2D1G9N8	Mycobacterium_phage	37.0	1.3e-08
WP_058125381.1|1233645_1234548_+|capsid	phage major capsid protein	capsid	V5R986	Arthrobacter_phage	61.8	1.3e-89
WP_058125382.1|1234567_1234945_+	hypothetical protein	NA	A0A068F4G2	Mycobacterium_phage	58.5	1.2e-28
WP_058125383.1|1235070_1235280_+	hypothetical protein	NA	NA	NA	NA	NA
WP_058125384.1|1235279_1235555_+	hypothetical protein	NA	A0A068F3C1	Mycobacterium_phage	61.2	2.3e-21
WP_058125385.1|1235557_1235947_+	hypothetical protein	NA	A0A068F2C6	Mycobacterium_phage	60.7	3.0e-35
WP_058125386.1|1236015_1236606_+	hypothetical protein	NA	A0A068F8K4	Mycobacterium_phage	71.9	1.2e-75
WP_058125387.1|1236711_1236990_+	hypothetical protein	NA	A0A068F4G7	Mycobacterium_phage	48.8	4.6e-14
WP_157892617.1|1237419_1237662_+	hypothetical protein	NA	A0A2H4PEX5	Gordonia_phage	68.6	3.1e-06
WP_058125389.1|1237664_1241141_+|tail	phage tail tape measure protein	tail	A0A2K9VEW6	Mycobacterium_phage	37.1	3.0e-70
WP_058125390.1|1241143_1242259_+	hypothetical protein	NA	A0A068F3C3	Mycobacterium_phage	56.3	5.6e-119
WP_157892619.1|1242378_1244139_+	hypothetical protein	NA	A0A068F4H3	Mycobacterium_phage	70.0	5.9e-256
WP_157892514.1|1244151_1244319_+	hypothetical protein	NA	NA	NA	NA	NA
WP_058125391.1|1244311_1244788_+	hypothetical protein	NA	A0A068F2D2	Mycobacterium_phage	44.7	7.7e-25
WP_058125392.1|1244799_1245879_+	hypothetical protein	NA	A0A068F8L3	Mycobacterium_phage	67.5	3.1e-146
WP_157892515.1|1245959_1248404_+	hypothetical protein	NA	A0A222ZL91	Mycobacterium_phage	29.1	1.8e-61
WP_157892516.1|1248688_1250227_+	hypothetical protein	NA	NA	NA	NA	NA
WP_058125395.1|1250244_1250580_+	hypothetical protein	NA	H6WSC4	Mycobacterium_phage	66.7	3.7e-26
WP_157892517.1|1250590_1250833_+	hypothetical protein	NA	NA	NA	NA	NA
WP_058125397.1|1250844_1251153_+	hypothetical protein	NA	A0A2D1GPQ0	Mycobacterium_phage	37.1	1.2e-07
>prophage 4
NZ_LN831039	Mycolicibacterium smegmatis strain NCTC8159 chromosome 1	6983267	1344014	1461547	6983267	integrase,transposase	Mycobacterium_phage(28.57%)	86	1326744:1326760	1392468:1393090
1326744:1326760	attL	GCTGGACGCAACCCGTC	NA	NA	NA	NA
WP_058125442.1|1344014_1345523_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
1326744:1326760	attL	GCTGGACGCAACCCGTC	NA	NA	NA	NA
WP_011726739.1|1345992_1347315_+|transposase	ISL3-like element IS1096 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	100.0	1.1e-254
WP_011726740.1|1347322_1348024_-	plasmid pRiA4b ORF-3 family protein	NA	A0A2H4PDG5	Mycobacterium_phage	99.6	2.0e-138
WP_058125443.1|1348667_1349021_-	hypothetical protein	NA	NA	NA	NA	NA
WP_058125444.1|1349017_1350760_-	hypothetical protein	NA	NA	NA	NA	NA
WP_058125445.1|1350763_1351072_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011726768.1|1351280_1352687_-|transposase	IS1380-like element ISMsm3 family transposase	transposase	A0A222ZN33	Mycobacterium_phage	43.9	5.1e-85
WP_058125446.1|1353007_1353331_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_058125447.1|1353375_1354668_-	DUF2786 domain-containing protein	NA	NA	NA	NA	NA
WP_058125448.1|1354780_1355656_+	formylglycine-generating enzyme family protein	NA	A0A075BSL8	Microcystis_phage	30.2	3.8e-22
WP_167350209.1|1355798_1356605_+	UTRA domain-containing protein	NA	NA	NA	NA	NA
WP_058125449.1|1356667_1358020_+	arylsulfatase	NA	NA	NA	NA	NA
WP_058125450.1|1358078_1359998_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	43.4	1.5e-132
WP_058125451.1|1359998_1360322_-	DUF202 domain-containing protein	NA	NA	NA	NA	NA
WP_058125452.1|1360318_1360699_-	DUF202 domain-containing protein	NA	NA	NA	NA	NA
WP_058125453.1|1360830_1362288_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_058125454.1|1362318_1363206_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_058125455.1|1363202_1363952_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	39.3	2.1e-32
WP_058125456.1|1363977_1365474_+	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	50.2	3.8e-110
WP_058125457.1|1365522_1366185_-	DUF4352 domain-containing protein	NA	A0A1D8EQ43	Mycobacterium_phage	42.5	9.0e-24
WP_058125458.1|1366353_1366671_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157892521.1|1367785_1371052_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_157892522.1|1371048_1371531_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081319397.1|1371540_1374468_+	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_081319398.1|1374448_1377751_+	DEAD/DEAH box helicase family protein	NA	A0A2H4J643	uncultured_Caudovirales_phage	25.4	1.4e-32
WP_081319399.1|1377806_1378409_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_085976166.1|1378474_1379618_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	34.5	2.8e-33
WP_081319400.1|1379546_1380107_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014877232.1|1380106_1380535_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_058125464.1|1381006_1382407_-|transposase	IS30-like element ISMsm8 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.2	7.0e-34
WP_081319401.1|1382439_1382988_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	U5P429	Shigella_phage	33.1	3.7e-15
WP_058125465.1|1383883_1384249_+	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_058127556.1|1384437_1390803_+	DUF3320 domain-containing protein	NA	NA	NA	NA	NA
WP_157892524.1|1391026_1391629_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_157892525.1|1391788_1392217_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_162267860.1|1394669_1397924_+	DEAD/DEAH box helicase	NA	A0A1B1IUI1	uncultured_Mediterranean_phage	25.5	9.6e-34
1394141:1394157	attR	GCTGGACGCAACCCGTC	NA	NA	NA	NA
WP_162267860.1|1394669_1397924_+	DEAD/DEAH box helicase	NA	A0A1B1IUI1	uncultured_Mediterranean_phage	25.5	9.6e-34
1392468:1393090	attR	CGGAATTTGTCAAGGTGTTTGAGTCCAGTGGGTGTTAAGCGGCTTCCGTTTCGGTCTCCTGTTCGGCCGGTTTGGGTGGGTTGATCGCCGCGGATTCAGGTAGGTCGATGACCTTGGGTGCGGTGTCGCGGCCGAATCGGCGTGGGTGGCGCGCCCTGGCGTCGGCGAGCACGGCTCGGCGCTGGGTGTCTTTCCCGCCGGCGAGGCCGTAGAACACATCGGCGGGTGTGTGCAGCCCGATGCCGCTGTGGCGGTGTTCATGGTTGTACCACTGCACGAATCGGTCCATGAAATCCCTCGCGTGATGGATGGATTCGAAGCGTTCCGGGAACGCCGGCGCATACTTCAAGGTCTTGAACCAGGACTCGCTGTAGGGGTTGTCGTTGGATACCTTGGGCCGCGAATGCGAGCGGATGACTCCCAGATCCGAGAGCAGTCCGGCGACGGTGTTGCTGGTCATCGAGGTGCCCCGATCAGCGTGCACGACGTGTGGGATGCCGTAGGTGCCGAAGATCTGTTCCATCATCTCCTTGGCCAGCTGGCCGCATTCGCGGGCGTGCACATGGACCCCGACGATGTAACGCGAGTAAATGTCGATCATCACGTAGGCGTCGTAGTAGACC	NA	NA	NA	NA
WP_081319404.1|1397920_1399879_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_157892526.1|1399835_1400279_-	hypothetical protein	NA	NA	NA	NA	NA
WP_058125471.1|1400654_1402886_+	AAA family ATPase	NA	K4I1H4	Acidithiobacillus_phage	32.4	1.6e-27
WP_058125472.1|1402860_1404063_+	restriction endonuclease	NA	NA	NA	NA	NA
WP_058127557.1|1404528_1404774_+	hypothetical protein	NA	NA	NA	NA	NA
WP_058127558.1|1405784_1407236_-	ADP-ribosylglycohydrolase family protein	NA	G3M9X5	Bacillus_virus	31.0	5.1e-19
WP_058125473.1|1407304_1407964_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_081319406.1|1409180_1409525_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157892527.1|1409793_1410747_+	hypothetical protein	NA	NA	NA	NA	NA
WP_058127560.1|1410786_1413228_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_058125475.1|1413224_1413575_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085976171.1|1413825_1415050_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	45.5	4.0e-57
WP_058124898.1|1415668_1417072_-|transposase	IS1380 family transposase	transposase	NA	NA	NA	NA
WP_058125477.1|1418824_1419076_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011727856.1|1419205_1420525_+|transposase	IS256 family transposase	transposase	A0A2P1JQX9	Mycobacterium_phage	100.0	2.8e-250
WP_085976171.1|1421221_1422447_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	45.5	4.0e-57
WP_058125479.1|1423826_1424039_+	hypothetical protein	NA	NA	NA	NA	NA
WP_058125480.1|1424110_1425022_+	hypothetical protein	NA	NA	NA	NA	NA
WP_058125481.1|1425042_1426122_-	HNH endonuclease	NA	NA	NA	NA	NA
WP_058125482.1|1426230_1427358_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA	NA
WP_058125483.1|1427538_1428618_-	HNH endonuclease	NA	NA	NA	NA	NA
WP_003892658.1|1428685_1428982_+	nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_011727559.1|1429129_1429327_+	type II toxin-antitoxin system antitoxin Phd	NA	NA	NA	NA	NA
WP_003892660.1|1429323_1429713_+	type II toxin-antitoxin system death-on-curing family toxin	NA	A0A1B3AYM0	Gordonia_phage	67.3	1.5e-34
WP_058125484.1|1429789_1431220_+	DUF3375 domain-containing protein	NA	NA	NA	NA	NA
WP_038557632.1|1431216_1431795_+	DUF4194 domain-containing protein	NA	NA	NA	NA	NA
WP_058125485.1|1431787_1435171_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_058125486.1|1435167_1436337_+	DUF3322 and DUF2220 domain-containing protein	NA	NA	NA	NA	NA
WP_003892665.1|1436357_1436612_+	type II toxin-antitoxin system VapB family antitoxin	NA	NA	NA	NA	NA
WP_058125487.1|1436611_1437001_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_058125488.1|1437019_1439425_-	SEC-C domain-containing protein	NA	NA	NA	NA	NA
WP_058125489.1|1439446_1441207_-	sulfatase-like hydrolase/transferase	NA	A0A2K9L727	Tupanvirus	34.2	2.0e-86
WP_058125490.1|1441203_1441641_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_058125491.1|1441807_1443457_+	ATP-binding domain-containing protein	NA	NA	NA	NA	NA
WP_058125492.1|1443467_1444271_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_058125493.1|1444347_1446216_+	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_058125494.1|1446218_1448900_-	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_058125495.1|1448896_1449730_-	FAD binding domain-containing protein	NA	NA	NA	NA	NA
WP_058125496.1|1449826_1451731_+	purine/pyrimidine permease	NA	NA	NA	NA	NA
WP_058125497.1|1451732_1452239_+	2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase	NA	NA	NA	NA	NA
WP_011727575.1|1452235_1452553_+	hydroxyisourate hydrolase	NA	NA	NA	NA	NA
WP_058125498.1|1452554_1453454_+	urate oxidase	NA	NA	NA	NA	NA
WP_058125499.1|1453470_1454829_+	8-oxoguanine deaminase	NA	NA	NA	NA	NA
WP_058125500.1|1454825_1456160_+	guanine deaminase	NA	NA	NA	NA	NA
WP_058125501.1|1456304_1457363_+	isopenicillin N synthase family oxygenase	NA	NA	NA	NA	NA
WP_058125502.1|1457493_1457886_+	hypothetical protein	NA	NA	NA	NA	NA
WP_110816200.1|1458026_1458335_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003892685.1|1458568_1458745_+	hypothetical protein	NA	NA	NA	NA	NA
WP_058125503.1|1458900_1459842_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011726768.1|1460140_1461547_+|transposase	IS1380-like element ISMsm3 family transposase	transposase	A0A222ZN33	Mycobacterium_phage	43.9	5.1e-85
>prophage 5
NZ_LN831039	Mycolicibacterium smegmatis strain NCTC8159 chromosome 1	6983267	2286131	2294141	6983267	tail	Mycobacterium_phage(42.86%)	8	NA	NA
WP_003893511.1|2286131_2287340_-	Fic family protein	NA	D7RWK9	Brochothrix_phage	24.4	2.2e-07
WP_003893512.1|2287398_2287650_+	hypothetical protein	NA	A0A0A7S2B5	Mycobacterium_phage	89.6	9.0e-33
WP_058127599.1|2287664_2288363_+	hypothetical protein	NA	A0A0A7RXU2	Mycobacterium_phage	93.5	1.3e-124
WP_003893514.1|2288373_2288814_-	SecB-like chaperone SecBL	NA	A0A160DCY1	Gordonia_phage	38.8	8.4e-18
WP_003893515.1|2288810_2289407_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_029104517.1|2289739_2290039_+	hypothetical protein	NA	A0A0A7RVJ2	Mycobacterium_phage	89.9	1.2e-44
WP_058125818.1|2290053_2293698_+|tail	phage tail tape measure protein	tail	Q854Y3	Mycobacterium_virus	90.7	0.0e+00
WP_081319445.1|2293694_2294141_+	hypothetical protein	NA	Q854Y2	Mycobacterium_virus	100.0	4.0e-84
>prophage 6
NZ_LN831039	Mycolicibacterium smegmatis strain NCTC8159 chromosome 1	6983267	5804854	5852098	6983267	integrase,transposase	Mycobacterium_phage(70.0%)	47	5837178:5837193	5855438:5855453
WP_011726739.1|5804854_5806177_+|transposase	ISL3-like element IS1096 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	100.0	1.1e-254
WP_011726740.1|5806184_5806886_-	plasmid pRiA4b ORF-3 family protein	NA	A0A2H4PDG5	Mycobacterium_phage	99.6	2.0e-138
WP_162139559.1|5807026_5807764_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080590943.1|5807782_5808106_+	ESX-1 secretion-associated protein	NA	NA	NA	NA	NA
WP_058127006.1|5808256_5809579_-|transposase	ISL3-like element ISMsm4 family transposase	transposase	NA	NA	NA	NA
WP_011726740.1|5809850_5810552_+	plasmid pRiA4b ORF-3 family protein	NA	A0A2H4PDG5	Mycobacterium_phage	99.6	2.0e-138
WP_011726739.1|5810559_5811882_-|transposase	ISL3-like element IS1096 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	100.0	1.1e-254
WP_058127007.1|5812110_5812797_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_058127743.1|5812937_5814170_+	YbfB/YjiJ family MFS transporter	NA	NA	NA	NA	NA
WP_058127008.1|5815060_5815759_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_081319601.1|5815745_5816111_+	hypothetical protein	NA	NA	NA	NA	NA
WP_058127010.1|5816091_5817084_-	LLM class F420-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_058127011.1|5817193_5817619_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_081319736.1|5817664_5818105_+	TIGR03618 family F420-dependent PPOX class oxidoreductase	NA	NA	NA	NA	NA
WP_058127012.1|5818307_5820455_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003897132.1|5820483_5821695_-	acetyl-CoA C-acetyltransferase	NA	NA	NA	NA	NA
WP_011730739.1|5821841_5822030_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003897142.1|5822269_5822701_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003897143.1|5822789_5823257_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_058127013.1|5823280_5824453_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_058127745.1|5824481_5825699_+	aldolase	NA	NA	NA	NA	NA
WP_058127014.1|5825712_5826675_+	allantoicase	NA	NA	NA	NA	NA
WP_003897147.1|5826671_5827571_+	allantoinase PuuE	NA	NA	NA	NA	NA
WP_058127015.1|5827645_5828353_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_011730746.1|5828349_5829912_-	NCS1 family nucleobase:cation symporter-1	NA	NA	NA	NA	NA
WP_011730747.1|5829986_5830682_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014878432.1|5830727_5831642_-	LLM class F420-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011730749.1|5831687_5832566_-	universal stress protein	NA	NA	NA	NA	NA
WP_011730750.1|5832639_5833722_-	CoA transferase	NA	NA	NA	NA	NA
WP_058127016.1|5833740_5835408_+	alpha-keto acid decarboxylase family protein	NA	E4WLQ6	Ostreococcus_tauri_virus	20.3	3.7e-05
WP_058127017.1|5835418_5835859_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_058127018.1|5835891_5836239_+	UBP-type zinc finger domain-containing protein	NA	NA	NA	NA	NA
WP_174519697.1|5836541_5839979_+	thioester reductase domain-containing protein	NA	A0A1V0SBX8	Catovirus	22.3	3.7e-12
5837178:5837193	attL	GCCGGGCTGCCGGCCG	NA	NA	NA	NA
WP_003897161.1|5840000_5840246_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162139619.1|5840293_5840833_-	YdcF family protein	NA	NA	NA	NA	NA
WP_003897163.1|5840959_5841958_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_036453811.1|5841954_5842782_-	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_011730759.1|5842790_5843081_-	gas vesicle protein K	NA	NA	NA	NA	NA
WP_003897166.1|5843080_5843281_-	gas vesicle protein	NA	NA	NA	NA	NA
WP_058127020.1|5843277_5843994_-	GvpL/GvpF family gas vesicle protein	NA	NA	NA	NA	NA
WP_011727856.1|5844461_5845781_+|transposase	IS256 family transposase	transposase	A0A2P1JQX9	Mycobacterium_phage	100.0	2.8e-250
WP_011730762.1|5846127_5846769_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029104393.1|5846944_5847175_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011727856.1|5847326_5848646_-|transposase	IS256 family transposase	transposase	A0A2P1JQX9	Mycobacterium_phage	100.0	2.8e-250
WP_011730766.1|5849675_5850245_+	metallophosphoesterase family protein	NA	A0A2D1GPW3	Mycobacterium_phage	36.3	1.2e-27
WP_014878443.1|5850241_5850745_-	SMI1/KNR4 family protein	NA	NA	NA	NA	NA
WP_081319602.1|5850883_5852098_+|integrase	site-specific integrase	integrase	G9FGY1	Rhodococcus_phage	43.6	4.8e-79
5855438:5855453	attR	GCCGGGCTGCCGGCCG	NA	NA	NA	NA
