assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001447095.1_ASM144709v1	NZ_CP013226	Salmonella enterica subsp. enterica serovar Anatum strain GT-38 chromosome, complete genome	1	2817084-2817198	1	CRISPRCasFinder	no		DEDDh,csa3,DinG,cas3,WYL,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1	Orphan	TTGTCTTCTCAATCCGCCAAAACATCTTCGG	31	1	4	2817115-2817167|2817115-2817167|2817115-2817167|2817115-2817167	NZ_CP013226.1_2070461-2070513|NZ_CP013226.1_2858181-2858233|NZ_CP013226.1_3620428-3620376|NZ_CP013226.1_4444477-4444425	NA	1	1	Orphan	DEDDh,csa3,DinG,cas3,WYL,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1	NA,NA	NA|230aa|up_9|NZ_CP013226.1_2802069_2802759_+	PRK05282, PRK05282, dipeptidase PepE	NA|544aa|up_8|NZ_CP013226.1_2802834_2804466_-	COG1283, NptA, Na+/phosphate symporter [Inorganic ion transport and metabolism]	NA|1228aa|up_7|NZ_CP013226.1_2804732_2808416_-	PRK09490, metH, B12-dependent methionine synthase; Provisional	NA|275aa|up_6|NZ_CP013226.1_2808719_2809544_+	PRK11569, PRK11569, glyoxylate bypass operon transcriptional repressor IclR	NA|136aa|up_5|NZ_CP013226.1_2809554_2809962_+	COG4405, COG4405, Uncharacterized protein conserved in bacteria [Function unknown]	NA|584aa|up_4|NZ_CP013226.1_2809925_2811677_-	COG4579, COG4579, Isocitrate dehydrogenase kinase/phosphatase [Signal transduction mechanisms]	NA|435aa|up_3|NZ_CP013226.1_2811778_2813083_-	PRK15063, PRK15063, isocitrate lyase; Provisional	NA|534aa|up_2|NZ_CP013226.1_2813114_2814716_-	PRK09255, PRK09255, malate synthase; Validated	NA|310aa|up_1|NZ_CP013226.1_2814984_2815914_-	PRK05368, PRK05368, homoserine O-succinyltransferase; Provisional	NA|146aa|up_0|NZ_CP013226.1_2816070_2816508_+	PRK10514, PRK10514, putative acetyltransferase; Provisional	NA|530aa|down_0|NZ_CP013226.1_2822187_2823777_+	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|430aa|down_1|NZ_CP013226.1_2823792_2825082_+	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional	NA|442aa|down_2|NZ_CP013226.1_2825078_2826404_-	PRK10365, PRK10365, sigma-54-dependent response regulator transcription factor ZraR	NA|466aa|down_3|NZ_CP013226.1_2826409_2827807_-	PRK10364, PRK10364, two-component system sensor histidine kinase ZraS	NA|152aa|down_4|NZ_CP013226.1_2828060_2828516_+	PRK11546, zraP, zinc resistance sensor/chaperone ZraP	NA|231aa|down_5|NZ_CP013226.1_2828557_2829250_-	pfam07356, DUF1481, Protein of unknown function (DUF1481)	NA|91aa|down_6|NZ_CP013226.1_2829261_2829534_-	PRK10753, PRK10753, DNA-binding protein HU-alpha	NA|197aa|down_7|NZ_CP013226.1_2829720_2830311_-	COG3068, COG3068, Uncharacterized protein conserved in bacteria [Function unknown]	NA|224aa|down_8|NZ_CP013226.1_2830352_2831024_-	PRK11617, PRK11617, deoxyribonuclease V	NA|355aa|down_9|NZ_CP013226.1_2831033_2832098_-	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated
GCF_001447095.1_ASM144709v1	NZ_CP013226	Salmonella enterica subsp. enterica serovar Anatum strain GT-38 chromosome, complete genome	2	4110640-4112254	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1	DEDDh,csa3,DinG,cas3,WYL,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	25,26,26	26	TypeI-E	DEDDh,csa3,DinG,cas3,WYL,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1	NA,NA	NA|381aa|up_9|NZ_CP013226.1_4096440_4097583_+	COG1929, COG1929, Glycerate kinase [Carbohydrate transport and metabolism]	NA|919aa|up_8|NZ_CP013226.1_4097626_4100383_-	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|432aa|up_7|NZ_CP013226.1_4100440_4101736_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_6|NZ_CP013226.1_4101787_4104022_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|119aa|up_5|NZ_CP013226.1_4104105_4104462_+	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription]	NA|99aa|up_4|NZ_CP013226.1_4104427_4104724_+	COG3668, ParE, Plasmid stabilization system protein [General function prediction only]	NA|267aa|up_3|NZ_CP013226.1_4105489_4106290_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_2|NZ_CP013226.1_4106517_4108155_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_1|NZ_CP013226.1_4108237_4109536_+	PRK00077, eno, enolase; Provisional	NA|224aa|up_0|NZ_CP013226.1_4109671_4110343_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|266aa|down_0|NZ_CP013226.1_4112351_4113149_+	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	NA|121aa|down_1|NZ_CP013226.1_4113238_4113601_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|down_2|NZ_CP013226.1_4114035_4115835_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|down_3|NZ_CP013226.1_4115834_4117547_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|down_4|NZ_CP013226.1_4117622_4118357_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|318aa|down_5|NZ_CP013226.1_4118569_4119523_-	PRK15379, PRK15379, type III secretion system effector SopD	cas3|888aa|down_6|NZ_CP013226.1_4119791_4122455_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|519aa|down_7|NZ_CP013226.1_4122466_4124023_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|187aa|down_8|NZ_CP013226.1_4124019_4124580_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|353aa|down_9|NZ_CP013226.1_4124593_4125652_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI
GCF_001447095.1_ASM144709v1	NZ_CP013226	Salmonella enterica subsp. enterica serovar Anatum strain GT-38 chromosome, complete genome	3	4224488-4224598	3	CRISPRCasFinder	no		DEDDh,csa3,DinG,cas3,WYL,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1	Orphan	GGGTTTTTTATTGCTTAATATAATTTGTAT	30	1	1	4224518-4224568	NZ_CP013226.1_4224633-4224683	NA	1	1	Orphan	DEDDh,csa3,DinG,cas3,WYL,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1	NA,NA	NA|360aa|up_9|NZ_CP013226.1_4212793_4213873_+	PRK10760, PRK10760, murein hydrolase B; Provisional	NA|166aa|up_8|NZ_CP013226.1_4214351_4214849_+	PRK03661, PRK03661, nicotinamide-nucleotide amidase	NA|354aa|up_7|NZ_CP013226.1_4214933_4215995_+	PRK09354, recA, recombinase A; Provisional	NA|167aa|up_6|NZ_CP013226.1_4216111_4216612_+	PRK00117, recX, recombination regulator RecX; Reviewed	NA|877aa|up_5|NZ_CP013226.1_4216847_4219478_+	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed	NA|62aa|up_4|NZ_CP013226.1_4219712_4219898_+	PRK01712, PRK01712, carbon storage regulator CsrA	NA|189aa|up_3|NZ_CP013226.1_4221150_4221717_+	PRK10725, PRK10725, fructose-1-phosphate/6-phosphogluconate phosphatase	NA|142aa|up_2|NZ_CP013226.1_4221713_4222139_+	COG1238, COG1238, Predicted membrane protein [Function unknown]	NA|519aa|up_1|NZ_CP013226.1_4222215_4223772_+	PRK02107, PRK02107, glutamate--cysteine ligase; Provisional	NA|172aa|up_0|NZ_CP013226.1_4223921_4224437_+	PRK02260, PRK02260, S-ribosylhomocysteine lyase	NA|457aa|down_0|NZ_CP013226.1_4224863_4226234_+	pfam16966, Porin_8, Porin-like glycoporin RafY	NA|513aa|down_1|NZ_CP013226.1_4226282_4227821_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|391aa|down_2|NZ_CP013226.1_4227837_4229010_-	PRK15136, PRK15136, multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA|177aa|down_3|NZ_CP013226.1_4229136_4229667_-	PRK10870, PRK10870, transcriptional repressor MprA; Provisional	NA|395aa|down_4|NZ_CP013226.1_4230163_4231348_-	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily	NA|332aa|down_5|NZ_CP013226.1_4231512_4232508_-	PRK11119, proX, proline/glycine betaine ABC transporter substrate-binding protein ProX	NA|355aa|down_6|NZ_CP013226.1_4232577_4233642_-	PRK10952, PRK10952, proline/glycine betaine ABC transporter permease ProW	NA|401aa|down_7|NZ_CP013226.1_4233634_4234837_-	PRK10070, PRK10070, proline/glycine betaine ABC transporter ATP-binding protein ProV	NA|320aa|down_8|NZ_CP013226.1_4235191_4236151_-	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit	NA|715aa|down_9|NZ_CP013226.1_4236161_4238306_-	PRK08188, PRK08188, ribonucleotide-diphosphate reductase subunit alpha; Validated
