assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001442805.1_ASM144280v1	NZ_CP011131	Lysobacter gummosus strain 3.2.11 chromosome, complete genome	1	46331-46408	1	CRISPRCasFinder	no	WYL	WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	Unclear	GGAATCCAGAGCCTTAAGCGCCATC	25	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	NA|252aa|up_8|NZ_CP011131.1_37908_38664_+,NA|50aa|up_6|NZ_CP011131.1_40131_40281_-,NA|126aa|up_5|NZ_CP011131.1_40279_40657_+,NA|146aa|up_1|NZ_CP011131.1_44519_44957_+,NA|202aa|down_3|NZ_CP011131.1_49855_50461_+	NA|243aa|up_9|NZ_CP011131.1_37131_37860_+	cd02423, Peptidase_C39G, A sub-family of peptidase family C39	NA|252aa|up_8|NZ_CP011131.1_37908_38664_+	NA	NA|450aa|up_7|NZ_CP011131.1_38697_40047_+	pfam13557, Phenol_MetA_deg, Putative MetA-pathway of phenol degradation	NA|50aa|up_6|NZ_CP011131.1_40131_40281_-	NA	NA|126aa|up_5|NZ_CP011131.1_40279_40657_+	NA	NA|446aa|up_4|NZ_CP011131.1_40653_41991_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|352aa|up_3|NZ_CP011131.1_42564_43620_-	PRK09293, PRK09293, class 1 fructose-bisphosphatase	NA|173aa|up_2|NZ_CP011131.1_43774_44293_-	pfam11268, DUF3071, Protein of unknown function (DUF3071)	NA|146aa|up_1|NZ_CP011131.1_44519_44957_+	NA	NA|410aa|up_0|NZ_CP011131.1_44989_46219_+	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|178aa|down_0|NZ_CP011131.1_46727_47261_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|222aa|down_1|NZ_CP011131.1_47517_48183_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|516aa|down_2|NZ_CP011131.1_48179_49727_+	PRK10337, PRK10337, sensor protein QseC; Provisional	NA|202aa|down_3|NZ_CP011131.1_49855_50461_+	NA	NA|415aa|down_4|NZ_CP011131.1_50478_51723_+	pfam07978, NIPSNAP, NIPSNAP	WYL|232aa|down_5|NZ_CP011131.1_51817_52513_+	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|296aa|down_6|NZ_CP011131.1_52980_53868_-	TIGR02957, putative_sigma_factor, RNA polymerase sigma-70 factor, TIGR02957 family	NA|148aa|down_7|NZ_CP011131.1_54009_54453_-	COG2128, COG2128, Uncharacterized conserved protein [Function unknown]	NA|216aa|down_8|NZ_CP011131.1_54609_55257_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|376aa|down_9|NZ_CP011131.1_55253_56381_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]
GCF_001442805.1_ASM144280v1	NZ_CP011131	Lysobacter gummosus strain 3.2.11 chromosome, complete genome	2	521616-521859	2	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	Orphan	GATGCTGCCGTTGACCGTTTCCAGG	25	0	0	NA	NA	NA	4	4	Orphan	WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	NA|113aa|up_6|NZ_CP011131.1_506093_506432_+,NA|129aa|down_9|NZ_CP011131.1_531924_532311_+	NA|192aa|up_9|NZ_CP011131.1_503171_503747_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|258aa|up_8|NZ_CP011131.1_503803_504577_+	cd10281, Nape_like_AP-endo, Neisseria meningitides Nape-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases	NA|470aa|up_7|NZ_CP011131.1_504566_505976_+	cd17486, MFS_AmpG_like, AmpG and similar transporters of the Major Facilitator Superfamily	NA|113aa|up_6|NZ_CP011131.1_506093_506432_+	NA	NA|381aa|up_5|NZ_CP011131.1_506533_507676_-	PRK09585, anmK, anhydro-N-acetylmuramic acid kinase; Reviewed	NA|491aa|up_4|NZ_CP011131.1_508074_509547_-	pfam01551, Peptidase_M23, Peptidase family M23	NA|423aa|up_3|NZ_CP011131.1_509696_510965_+	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|249aa|up_2|NZ_CP011131.1_517647_518394_-	pfam10014, 2OG-Fe_Oxy_2, 2OG-Fe dioxygenase	NA|130aa|up_1|NZ_CP011131.1_518439_518829_-	COG3686, COG3686, Predicted membrane protein [Function unknown]	NA|576aa|up_0|NZ_CP011131.1_518981_520709_-	cd05660, M28_like_PA, M28 Zn-peptidase containing a protease-associated (PA) domain insert	NA|512aa|down_0|NZ_CP011131.1_522186_523722_+	PRK05434, PRK05434, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA|422aa|down_1|NZ_CP011131.1_523721_524987_+	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	NA|480aa|down_2|NZ_CP011131.1_525271_526711_+	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane]	NA|106aa|down_3|NZ_CP011131.1_527064_527382_-	COG4517, COG4517, Uncharacterized protein conserved in bacteria [Function unknown]	NA|232aa|down_4|NZ_CP011131.1_527532_528228_-	pfam01694, Rhomboid, Rhomboid family	NA|460aa|down_5|NZ_CP011131.1_528494_529874_+	pfam03349, Toluene_X, Outer membrane protein transport protein (OMPP1/FadL/TodX)	NA|233aa|down_6|NZ_CP011131.1_530042_530741_+	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown]	NA|85aa|down_7|NZ_CP011131.1_530812_531067_+	pfam09932, DUF2164, Uncharacterized conserved protein (DUF2164)	NA|151aa|down_8|NZ_CP011131.1_531201_531654_-	pfam12098, DUF3574, Protein of unknown function (DUF3574)	NA|129aa|down_9|NZ_CP011131.1_531924_532311_+	NA
GCF_001442805.1_ASM144280v1	NZ_CP011131	Lysobacter gummosus strain 3.2.11 chromosome, complete genome	3	927862-927942	3	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	Orphan	CTGGATTCCCGCGTTCGCGGGAATGACG	28	1	2	927890-927914|927890-927914	NZ_CP011131.1_4601384-4601360|NZ_CP011131.1_5613065-5613089	I-E	1	1	Orphan	WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	NA|249aa|up_7|NZ_CP011131.1_917034_917781_-,NA|121aa|up_6|NZ_CP011131.1_917792_918155_-,NA|483aa|up_4|NZ_CP011131.1_920348_921797_-,NA|164aa|up_3|NZ_CP011131.1_921825_922317_-,NA|470aa|up_1|NZ_CP011131.1_925155_926565_-,NA|167aa|up_0|NZ_CP011131.1_926597_927098_-,NA	NA|547aa|up_9|NZ_CP011131.1_913811_915452_+	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|482aa|up_8|NZ_CP011131.1_915542_916988_-	PRK11633, PRK11633, cell division protein DedD; Provisional	NA|249aa|up_7|NZ_CP011131.1_917034_917781_-	NA	NA|121aa|up_6|NZ_CP011131.1_917792_918155_-	NA	NA|668aa|up_5|NZ_CP011131.1_918313_920317_+	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]	NA|483aa|up_4|NZ_CP011131.1_920348_921797_-	NA	NA|164aa|up_3|NZ_CP011131.1_921825_922317_-	NA	NA|678aa|up_2|NZ_CP011131.1_922691_924725_-	cd13853, CuRO_1_Tth-MCO_like, The first cupredoxin domain of the bacterial laccases similar to Tth-MCO from Thermus Thermophilus	NA|470aa|up_1|NZ_CP011131.1_925155_926565_-	NA	NA|167aa|up_0|NZ_CP011131.1_926597_927098_-	NA	NA|950aa|down_0|NZ_CP011131.1_928095_930945_+	PRK11072, PRK11072, bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase	NA|137aa|down_1|NZ_CP011131.1_931096_931507_+	pfam14112, DUF4284, Immunity protein 22	NA|316aa|down_2|NZ_CP011131.1_931654_932602_-	pfam06258, Mito_fiss_Elm1, Mitochondrial fission ELM1	NA|196aa|down_3|NZ_CP011131.1_932746_933334_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|193aa|down_4|NZ_CP011131.1_933478_934057_+	COG2353, COG2353, Uncharacterized conserved protein [Function unknown]	NA|238aa|down_5|NZ_CP011131.1_934094_934808_+	cd02910, cupin_Yhhw_N, Escherichia coli YhhW and YhaK and related proteins, pirin-like bicupin, N-terminal cupin domain	NA|68aa|down_6|NZ_CP011131.1_935094_935298_+	COG4391, COG4391, Uncharacterized protein conserved in bacteria [Function unknown]	NA|381aa|down_7|NZ_CP011131.1_935308_936451_+	cd03819, GT4_WavL-like, Vibrio cholerae WavL and similar sequences	NA|468aa|down_8|NZ_CP011131.1_936425_937829_+	COG3307, RfaL, Lipid A core - O-antigen ligase and related enzymes [Cell envelope biogenesis, outer membrane]	NA|309aa|down_9|NZ_CP011131.1_937862_938789_-	PRK08733, PRK08733, LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase
GCF_001442805.1_ASM144280v1	NZ_CP011131	Lysobacter gummosus strain 3.2.11 chromosome, complete genome	4	1175383-1175605	1	PILER-CR	no		WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	Orphan	TCCTTCCAGAACGTCATTCCCGCGAACGCGGGAATCCAGTGCCTTTCGT	49	1	3	1175527-1175585|1175527-1175585|1175527-1175585	NZ_CP011131.1_1175606-1175664|NZ_CP011131.1_1506579-1506637|NZ_CP011131.1_3699258-3699316	I-E	2	2	Orphan	WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	NA,NA|203aa|down_0|NZ_CP011131.1_1175749_1176358_-,NA|112aa|down_7|NZ_CP011131.1_1187186_1187522_+,NA|105aa|down_8|NZ_CP011131.1_1187959_1188274_+,NA|77aa|down_9|NZ_CP011131.1_1188597_1188828_+	NA|67aa|up_9|NZ_CP011131.1_1161756_1161957_-	PRK05659, PRK05659, sulfur carrier protein ThiS; Validated	NA|607aa|up_8|NZ_CP011131.1_1162450_1164271_+	cd01847, Triacylglycerol_lipase_like, Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases	NA|732aa|up_7|NZ_CP011131.1_1164495_1166691_-	COG1505, COG1505, Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]	NA|295aa|up_6|NZ_CP011131.1_1167210_1168095_-	pfam09572, RE_XamI, XamI restriction endonuclease	NA|553aa|up_5|NZ_CP011131.1_1168127_1169786_-	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only]	NA|194aa|up_4|NZ_CP011131.1_1170274_1170856_+	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau	NA|150aa|up_3|NZ_CP011131.1_1171226_1171676_+	COG4067, COG4067, Uncharacterized protein conserved in archaea [Posttranslational modification, protein turnover, chaperones]	NA|303aa|up_2|NZ_CP011131.1_1171734_1172643_+	PRK10446, PRK10446, 30S ribosomal protein S6--L-glutamate ligase	NA|228aa|up_1|NZ_CP011131.1_1173247_1173931_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|410aa|up_0|NZ_CP011131.1_1174049_1175279_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|203aa|down_0|NZ_CP011131.1_1175749_1176358_-	NA	NA|305aa|down_1|NZ_CP011131.1_1176572_1177487_-	PRK06606, PRK06606, branched-chain amino acid transaminase	NA|238aa|down_2|NZ_CP011131.1_1177596_1178310_-	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|425aa|down_3|NZ_CP011131.1_1178696_1179971_-	pfam13688, Reprolysin_5, Metallo-peptidase family M12	NA|275aa|down_4|NZ_CP011131.1_1180254_1181079_-	TIGR00676, 510-methylenetetrahydrofolate_reductase	NA|228aa|down_5|NZ_CP011131.1_1181390_1182074_+	COG3393, COG3393, Predicted acetyltransferase [General function prediction only]	NA|1501aa|down_6|NZ_CP011131.1_1182674_1187177_+	COG3209, RhsA, Rhs family protein [Cell envelope biogenesis, outer membrane]	NA|112aa|down_7|NZ_CP011131.1_1187186_1187522_+	NA	NA|105aa|down_8|NZ_CP011131.1_1187959_1188274_+	NA	NA|77aa|down_9|NZ_CP011131.1_1188597_1188828_+	NA
GCF_001442805.1_ASM144280v1	NZ_CP011131	Lysobacter gummosus strain 3.2.11 chromosome, complete genome	5	1231405-1231749	1	CRT	no		WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	Orphan	GAAGACCGCCAAGAAGGCCGCCAAGAAGNC	30	2	2	1231606-1231623|1231702-1231719	NZ_CP011131.1_1549952-1549969|NZ_CP011131.1_1549898-1549915	NA	6	6	Orphan	WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	NA|206aa|up_5|NZ_CP011131.1_1226085_1226703_+,NA|147aa|up_0|NZ_CP011131.1_1230749_1231190_-,NA|384aa|down_5|NZ_CP011131.1_1239006_1240158_+	NA|338aa|up_9|NZ_CP011131.1_1222962_1223976_-	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau	NA|208aa|up_8|NZ_CP011131.1_1223968_1224592_-	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|319aa|up_7|NZ_CP011131.1_1224681_1225638_+	COG0330, HflC, Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones]	NA|147aa|up_6|NZ_CP011131.1_1225641_1226082_+	COG1585, COG1585, Membrane protein implicated in regulation of membrane protease activity [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]	NA|206aa|up_5|NZ_CP011131.1_1226085_1226703_+	NA	NA|374aa|up_4|NZ_CP011131.1_1226996_1228118_+	PRK00389, gcvT, glycine cleavage system aminomethyltransferase GcvT	NA|209aa|up_3|NZ_CP011131.1_1228132_1228759_+	cd03022, DsbA_HCCA_Iso, DsbA family, 2-hydroxychromene-2-carboxylate (HCCA) isomerase subfamily; HCCA isomerase is a glutathione (GSH) dependent enzyme involved in the naphthalene catabolic pathway	NA|132aa|up_2|NZ_CP011131.1_1228939_1229335_+	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|232aa|up_1|NZ_CP011131.1_1230016_1230712_+	pfam02956, TT_ORF1, TT viral orf 1	NA|147aa|up_0|NZ_CP011131.1_1230749_1231190_-	NA	NA|178aa|down_0|NZ_CP011131.1_1232149_1232683_+	cd07818, SRPBCC_1, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins	NA|475aa|down_1|NZ_CP011131.1_1232855_1234280_-	pfam00144, Beta-lactamase, Beta-lactamase	NA|531aa|down_2|NZ_CP011131.1_1234808_1236401_-	PRK02106, PRK02106, choline dehydrogenase; Validated	NA|463aa|down_3|NZ_CP011131.1_1236688_1238077_+	COG3202, COG3202, ATP/ADP translocase [Energy production and conversion]	NA|294aa|down_4|NZ_CP011131.1_1238073_1238955_+	cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain	NA|384aa|down_5|NZ_CP011131.1_1239006_1240158_+	NA	NA|450aa|down_6|NZ_CP011131.1_1240369_1241719_+	COG3202, COG3202, ATP/ADP translocase [Energy production and conversion]	NA|377aa|down_7|NZ_CP011131.1_1241715_1242846_+	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	NA|117aa|down_8|NZ_CP011131.1_1242976_1243327_+	pfam06993, DUF1304, Protein of unknown function (DUF1304)	NA|200aa|down_9|NZ_CP011131.1_1243599_1244199_-	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional
GCF_001442805.1_ASM144280v1	NZ_CP011131	Lysobacter gummosus strain 3.2.11 chromosome, complete genome	6	1718191-1718293	4	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	Orphan	TTCGGCTACGCCGAAGTAAAGCGGAG	26	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	NA,NA|184aa|down_4|NZ_CP011131.1_1723088_1723640_-,NA|128aa|down_6|NZ_CP011131.1_1725403_1725787_-	NA|316aa|up_9|NZ_CP011131.1_1706133_1707081_+	pfam07335, Glyco_hydro_75, Fungal chitosanase of glycosyl hydrolase group 75	NA|636aa|up_8|NZ_CP011131.1_1707626_1709534_+	TIGR01451, unnamed_protein_product, conserved repeat domain	NA|239aa|up_7|NZ_CP011131.1_1709655_1710372_+	sd00006, TPR, Tetratricopeptide repeat	NA|220aa|up_6|NZ_CP011131.1_1710695_1711355_+	sd00045, ANK, ankyrin repeats	NA|407aa|up_5|NZ_CP011131.1_1711422_1712643_+	cd00519, Lipase_3, Lipase (class 3)	NA|604aa|up_4|NZ_CP011131.1_1712788_1714600_+	sd00045, ANK, ankyrin repeats	NA|155aa|up_3|NZ_CP011131.1_1714660_1715125_-	COG2128, COG2128, Uncharacterized conserved protein [Function unknown]	NA|281aa|up_2|NZ_CP011131.1_1715371_1716214_-	cd03141, GATase1_Hsp31_like, Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein	NA|236aa|up_1|NZ_CP011131.1_1716263_1716971_-	cd03141, GATase1_Hsp31_like, Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein	NA|300aa|up_0|NZ_CP011131.1_1717072_1717972_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|268aa|down_0|NZ_CP011131.1_1718655_1719459_+	pfam06629, MipA, MltA-interacting protein MipA	NA|246aa|down_1|NZ_CP011131.1_1719677_1720415_+	cd06193, siderophore_interacting, Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family	NA|458aa|down_2|NZ_CP011131.1_1720469_1721843_-	COG4320, COG4320, Uncharacterized protein conserved in bacteria [Function unknown]	NA|339aa|down_3|NZ_CP011131.1_1722029_1723046_+	cd05640, M28_like, M28 Zn-peptidase; uncharacterized subfamily	NA|184aa|down_4|NZ_CP011131.1_1723088_1723640_-	NA	NA|296aa|down_5|NZ_CP011131.1_1724016_1724904_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|128aa|down_6|NZ_CP011131.1_1725403_1725787_-	NA	NA|256aa|down_7|NZ_CP011131.1_1726001_1726769_-	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms]	NA|432aa|down_8|NZ_CP011131.1_1726791_1728087_-	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms]	NA|340aa|down_9|NZ_CP011131.1_1728307_1729327_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain
GCF_001442805.1_ASM144280v1	NZ_CP011131	Lysobacter gummosus strain 3.2.11 chromosome, complete genome	7	1838361-1838441	5	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	Orphan	CTGGATTCCCGCTTTCGCGGGAATGACG	28	1	9	1838389-1838413|1838389-1838413|1838389-1838413|1838389-1838413|1838389-1838413|1838389-1838413|1838389-1838413|1838389-1838413|1838389-1838413	NZ_CP011131.1_4601384-4601360|NZ_CP011131.1_5613065-5613089|NZ_CP011131.1_501377-501353|NZ_CP011131.1_643221-643197|NZ_CP011131.1_643433-643409|NZ_CP011131.1_4370401-4370377|NZ_CP011131.1_4729616-4729592|NZ_CP011131.1_3348641-3348665|NZ_CP011131.1_4595296-4595320	I-E	1	1	Orphan	WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	NA|65aa|up_9|NZ_CP011131.1_1826838_1827033_-,NA|624aa|up_4|NZ_CP011131.1_1832569_1834441_-,NA|203aa|up_2|NZ_CP011131.1_1836320_1836929_+,NA|105aa|up_0|NZ_CP011131.1_1837913_1838228_+,NA	NA|65aa|up_9|NZ_CP011131.1_1826838_1827033_-	NA	NA|287aa|up_8|NZ_CP011131.1_1827325_1828186_-	COG2961, ComJ, Protein involved in catabolism of external DNA [General function prediction only]	NA|224aa|up_7|NZ_CP011131.1_1828377_1829049_+	PRK11083, PRK11083, DNA-binding response regulator CreB; Provisional	NA|481aa|up_6|NZ_CP011131.1_1829056_1830499_+	PRK11100, PRK11100, sensory histidine kinase CreC; Provisional	NA|674aa|up_5|NZ_CP011131.1_1830515_1832537_-	pfam13226, DUF4034, Domain of unknown function (DUF4034)	NA|624aa|up_4|NZ_CP011131.1_1832569_1834441_-	NA	NA|503aa|up_3|NZ_CP011131.1_1834613_1836122_+	PRK11715, PRK11715, cell envelope integrity protein CreD	NA|203aa|up_2|NZ_CP011131.1_1836320_1836929_+	NA	NA|296aa|up_1|NZ_CP011131.1_1836925_1837813_+	cd07574, nitrilase_Rim1_like, Uncharacterized subgroup of the nitrilase superfamily; some members of this subgroup have an N-terminal RimI domain (class 12 nitrilases)	NA|105aa|up_0|NZ_CP011131.1_1837913_1838228_+	NA	NA|184aa|down_0|NZ_CP011131.1_1838944_1839496_-	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|397aa|down_1|NZ_CP011131.1_1839492_1840683_-	cd03814, GT4-like, glycosyltransferase family 4 proteins	NA|506aa|down_2|NZ_CP011131.1_1840920_1842438_+	pfam04349, MdoG, Periplasmic glucan biosynthesis protein, MdoG	NA|640aa|down_3|NZ_CP011131.1_1842434_1844354_+	PRK05454, PRK05454, glucans biosynthesis glucosyltransferase MdoH	NA|571aa|down_4|NZ_CP011131.1_1844424_1846137_+	PRK08315, PRK08315, AMP-binding domain protein; Validated	NA|510aa|down_5|NZ_CP011131.1_1846159_1847689_-	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism]	NA|695aa|down_6|NZ_CP011131.1_1847704_1849789_-	PRK05443, PRK05443, polyphosphate kinase; Provisional	NA|466aa|down_7|NZ_CP011131.1_1849828_1851226_-	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR	NA|236aa|down_8|NZ_CP011131.1_1851235_1851943_-	TIGR02154, PhoB, phosphate regulon transcriptional regulatory protein PhoB	NA|567aa|down_9|NZ_CP011131.1_1852577_1854278_-	COG4783, COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only]
GCF_001442805.1_ASM144280v1	NZ_CP011131	Lysobacter gummosus strain 3.2.11 chromosome, complete genome	8	2242679-2242788	6	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	Orphan	ATGACGGTGTTGAGGGTTCTCGCGCGAAA	29	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	NA|72aa|up_6|NZ_CP011131.1_2232690_2232906_-,NA|131aa|down_2|NZ_CP011131.1_2249260_2249653_+,NA|104aa|down_4|NZ_CP011131.1_2250630_2250942_+,NA|87aa|down_5|NZ_CP011131.1_2250951_2251212_+,NA|116aa|down_6|NZ_CP011131.1_2251338_2251686_+	NA|143aa|up_9|NZ_CP011131.1_2230133_2230562_-	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional	NA|126aa|up_8|NZ_CP011131.1_2230754_2231132_-	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional	NA|392aa|up_7|NZ_CP011131.1_2231254_2232430_-	PRK05790, PRK05790, putative acyltransferase; Provisional	NA|72aa|up_6|NZ_CP011131.1_2232690_2232906_-	NA	NA|934aa|up_5|NZ_CP011131.1_2233008_2235810_+	cd04848, Peptidases_S8_Autotransporter_serine_protease_like, Peptidase S8 family domain in Autotransporter serine proteases	NA|386aa|up_4|NZ_CP011131.1_2236082_2237240_-	cd01156, IVD, Isovaleryl-CoA dehydrogenase	NA|251aa|up_3|NZ_CP011131.1_2237241_2237994_-	cd03124, alpha_CA_prokaryotic_like, Carbonic anhydrase alpha, prokaryotic-like subfamily	NA|368aa|up_2|NZ_CP011131.1_2238147_2239251_-	COG0334, GdhA, Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]	NA|722aa|up_1|NZ_CP011131.1_2239663_2241829_+	cd02619, Peptidase_C1, C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase)	NA|106aa|up_0|NZ_CP011131.1_2242060_2242378_-	pfam12779, YXWGXW, YXWGXW repeat (2 copies)	NA|1196aa|down_0|NZ_CP011131.1_2242988_2246576_+	cd03678, MM_CoA_mutase_1, Coenzyme B12-dependent-methylmalonyl coenzyme A (CoA) mutase (MCM) family, unknown subfamily 1; composed of uncharacterized bacterial proteins containing a C-terminal MCM domain	NA|593aa|down_1|NZ_CP011131.1_2247035_2248814_+	pfam01483, P_proprotein, Proprotein convertase P-domain	NA|131aa|down_2|NZ_CP011131.1_2249260_2249653_+	NA	NA|271aa|down_3|NZ_CP011131.1_2249649_2250462_+	pfam06414, Zeta_toxin, Zeta toxin	NA|104aa|down_4|NZ_CP011131.1_2250630_2250942_+	NA	NA|87aa|down_5|NZ_CP011131.1_2250951_2251212_+	NA	NA|116aa|down_6|NZ_CP011131.1_2251338_2251686_+	NA	NA|127aa|down_7|NZ_CP011131.1_2251697_2252078_+	pfam06414, Zeta_toxin, Zeta toxin	NA|381aa|down_8|NZ_CP011131.1_2252052_2253194_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|129aa|down_9|NZ_CP011131.1_2253345_2253732_-	pfam00089, Trypsin, Trypsin
GCF_001442805.1_ASM144280v1	NZ_CP011131	Lysobacter gummosus strain 3.2.11 chromosome, complete genome	9	2509416-2509522	7	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	Orphan	TCGGCGGAGCCGAACATCTAGAGACTTC	28	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	NA,NA|908aa|down_0|NZ_CP011131.1_2509662_2512386_-,NA|196aa|down_1|NZ_CP011131.1_2512382_2512970_-,NA|149aa|down_5|NZ_CP011131.1_2517782_2518229_+	NA|171aa|up_9|NZ_CP011131.1_2498951_2499464_-	PRK05422, smpB, SsrA-binding protein SmpB	NA|155aa|up_8|NZ_CP011131.1_2499715_2500180_+	cd07813, COQ10p_like, Coenzyme Q-binding protein COQ10p and similar proteins	NA|89aa|up_7|NZ_CP011131.1_2500176_2500443_+	PRK01777, PRK01777, RnfH family protein	NA|136aa|up_6|NZ_CP011131.1_2500488_2500896_-	COG2913, OlmA, Outer membrane lipoprotein OmlA (small protein A) [Cell envelope biogenesis, outer membrane]	NA|134aa|up_5|NZ_CP011131.1_2501107_2501509_+	PRK09462, fur, ferric uptake regulator; Provisional	NA|561aa|up_4|NZ_CP011131.1_2502116_2503799_-	COG0497, RecN, ATPase involved in DNA repair [DNA replication, recombination, and repair]	NA|351aa|up_3|NZ_CP011131.1_2504103_2505156_+	PRK00082, hrcA, heat-inducible transcription repressor; Provisional	NA|172aa|up_2|NZ_CP011131.1_2505332_2505848_+	PRK14147, PRK14147, heat shock protein GrpE; Provisional	NA|639aa|up_1|NZ_CP011131.1_2506045_2507962_+	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|378aa|up_0|NZ_CP011131.1_2508125_2509259_+	PRK10767, PRK10767, chaperone protein DnaJ; Provisional	NA|908aa|down_0|NZ_CP011131.1_2509662_2512386_-	NA	NA|196aa|down_1|NZ_CP011131.1_2512382_2512970_-	NA	NA|643aa|down_2|NZ_CP011131.1_2513180_2515109_+	pfam12969, DUF3857, Domain of Unknown Function with PDB structure (DUF3857)	NA|246aa|down_3|NZ_CP011131.1_2515228_2515966_+	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional	NA|376aa|down_4|NZ_CP011131.1_2516655_2517783_+	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|149aa|down_5|NZ_CP011131.1_2517782_2518229_+	NA	NA|1082aa|down_6|NZ_CP011131.1_2518236_2521482_+	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|159aa|down_7|NZ_CP011131.1_2521957_2522434_+	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|316aa|down_8|NZ_CP011131.1_2522464_2523412_+	COG4255, COG4255, Uncharacterized protein conserved in bacteria [Function unknown]	NA|577aa|down_9|NZ_CP011131.1_2523449_2525180_+	PRK11070, PRK11070, single-stranded-DNA-specific exonuclease RecJ
GCF_001442805.1_ASM144280v1	NZ_CP011131	Lysobacter gummosus strain 3.2.11 chromosome, complete genome	10	2521610-2521690	8	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	Orphan	ATCCAGAGCCTTCAGAGCCATCCTTCCA	28	1	4	2521638-2521662|2521638-2521662|2521638-2521662|2521638-2521662	NZ_CP011131.1_46415-46439|NZ_CP011131.1_1247091-1247115|NZ_CP011131.1_5989373-5989397|NZ_CP011131.1_1873588-1873564	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	NA|908aa|up_6|NZ_CP011131.1_2509662_2512386_-,NA|196aa|up_5|NZ_CP011131.1_2512382_2512970_-,NA|149aa|up_1|NZ_CP011131.1_2517782_2518229_+,NA|54aa|down_7|NZ_CP011131.1_2531820_2531982_+	NA|172aa|up_9|NZ_CP011131.1_2505332_2505848_+	PRK14147, PRK14147, heat shock protein GrpE; Provisional	NA|639aa|up_8|NZ_CP011131.1_2506045_2507962_+	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|378aa|up_7|NZ_CP011131.1_2508125_2509259_+	PRK10767, PRK10767, chaperone protein DnaJ; Provisional	NA|908aa|up_6|NZ_CP011131.1_2509662_2512386_-	NA	NA|196aa|up_5|NZ_CP011131.1_2512382_2512970_-	NA	NA|643aa|up_4|NZ_CP011131.1_2513180_2515109_+	pfam12969, DUF3857, Domain of Unknown Function with PDB structure (DUF3857)	NA|246aa|up_3|NZ_CP011131.1_2515228_2515966_+	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional	NA|376aa|up_2|NZ_CP011131.1_2516655_2517783_+	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|149aa|up_1|NZ_CP011131.1_2517782_2518229_+	NA	NA|1082aa|up_0|NZ_CP011131.1_2518236_2521482_+	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|159aa|down_0|NZ_CP011131.1_2521957_2522434_+	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|316aa|down_1|NZ_CP011131.1_2522464_2523412_+	COG4255, COG4255, Uncharacterized protein conserved in bacteria [Function unknown]	NA|577aa|down_2|NZ_CP011131.1_2523449_2525180_+	PRK11070, PRK11070, single-stranded-DNA-specific exonuclease RecJ	NA|599aa|down_3|NZ_CP011131.1_2525502_2527299_+	COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones]	NA|764aa|down_4|NZ_CP011131.1_2527359_2529651_+	pfam14561, TPR_20, Tetratricopeptide repeat	NA|346aa|down_5|NZ_CP011131.1_2529875_2530913_+	cd04513, Glycosylasparaginase, Glycosylasparaginase and similar proteins	NA|243aa|down_6|NZ_CP011131.1_2530921_2531650_+	COG3142, CutC, Uncharacterized protein involved in copper resistance [Inorganic ion transport and metabolism]	NA|54aa|down_7|NZ_CP011131.1_2531820_2531982_+	NA	NA|597aa|down_8|NZ_CP011131.1_2532131_2533922_+	pfam09129, Chol_subst-bind, Cholesterol oxidase, substrate-binding	NA|970aa|down_9|NZ_CP011131.1_2534498_2537408_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel
GCF_001442805.1_ASM144280v1	NZ_CP011131	Lysobacter gummosus strain 3.2.11 chromosome, complete genome	11	2550427-2550542	9	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	Orphan	CTGGATCCCCGCCTTCGCGGGGATGACGAGC	31	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	NA|54aa|up_7|NZ_CP011131.1_2531820_2531982_+,NA	NA|346aa|up_9|NZ_CP011131.1_2529875_2530913_+	cd04513, Glycosylasparaginase, Glycosylasparaginase and similar proteins	NA|243aa|up_8|NZ_CP011131.1_2530921_2531650_+	COG3142, CutC, Uncharacterized protein involved in copper resistance [Inorganic ion transport and metabolism]	NA|54aa|up_7|NZ_CP011131.1_2531820_2531982_+	NA	NA|597aa|up_6|NZ_CP011131.1_2532131_2533922_+	pfam09129, Chol_subst-bind, Cholesterol oxidase, substrate-binding	NA|970aa|up_5|NZ_CP011131.1_2534498_2537408_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|816aa|up_4|NZ_CP011131.1_2537528_2539976_+	pfam07971, Glyco_hydro_92, Glycosyl hydrolase family 92	NA|805aa|up_3|NZ_CP011131.1_2540174_2542589_+	cd06563, GH20_chitobiase-like, The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin	NA|968aa|up_2|NZ_CP011131.1_2542755_2545659_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|870aa|up_1|NZ_CP011131.1_2546140_2548750_+	COG3250, LacZ, Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]	NA|376aa|up_0|NZ_CP011131.1_2549100_2550229_+	PRK00578, prfB, peptide chain release factor 2; Validated	NA|506aa|down_0|NZ_CP011131.1_2550651_2552169_+	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed	NA|353aa|down_1|NZ_CP011131.1_2552475_2553534_+	COG3437, COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain [Transcription / Signal transduction mechanisms]	NA|730aa|down_2|NZ_CP011131.1_2553538_2555728_+	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|290aa|down_3|NZ_CP011131.1_2555779_2556649_-	PRK08788, PRK08788, enoyl-CoA hydratase; Validated	NA|560aa|down_4|NZ_CP011131.1_2556829_2558509_-	PRK08751, PRK08751, long-chain fatty acid--CoA ligase	NA|187aa|down_5|NZ_CP011131.1_2558738_2559299_+	pfam14534, DUF4440, Domain of unknown function (DUF4440)	NA|922aa|down_6|NZ_CP011131.1_2559498_2562264_-	PRK09277, PRK09277, aconitate hydratase AcnA	NA|302aa|down_7|NZ_CP011131.1_2562439_2563345_-	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|370aa|down_8|NZ_CP011131.1_2563452_2564562_+	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|348aa|down_9|NZ_CP011131.1_2564636_2565680_+	cd13649, PBP2_Cae31940, Substrate binding domain of an uncharacterized protein similar to ABC-type transporter for thiamin biosynthetic pathway intermediates; a member of the type 2 periplasmic binding fold superfamily
GCF_001442805.1_ASM144280v1	NZ_CP011131	Lysobacter gummosus strain 3.2.11 chromosome, complete genome	12	2785619-2785741	10	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	Orphan	CTGGATGTTCGGCTACGCCGAAGTAAAGCGGAGCCCGCCTTCGCG	45	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	NA,NA	NA|111aa|up_9|NZ_CP011131.1_2773572_2773905_-	cd03530, Rieske_NirD_small_Bacillus, Small subunit of nitrite reductase (NirD) family, Rieske domain; composed of proteins similar to the Bacillus subtilis small subunit of assimilatory nitrite reductase containing a Rieske domain	NA|819aa|up_8|NZ_CP011131.1_2773919_2776376_-	COG1251, NirB, NAD(P)H-nitrite reductase [Energy production and conversion]	NA|390aa|up_7|NZ_CP011131.1_2776402_2777572_-	COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism]	NA|358aa|up_6|NZ_CP011131.1_2777997_2779071_-	pfam13379, NMT1_2, NMT1-like family	NA|192aa|up_5|NZ_CP011131.1_2779091_2779667_-	COG3707, AmiR, Response regulator with putative antiterminator output domain [Signal transduction mechanisms]	NA|335aa|up_4|NZ_CP011131.1_2779758_2780763_+	PRK10637, cysG, siroheme synthase CysG	NA|309aa|up_3|NZ_CP011131.1_2780847_2781774_-	cd14485, mltA_like_LT_A, Domain A of MltA and related lytic transglycosylase; domain A is interrupted by domain B	NA|149aa|up_2|NZ_CP011131.1_2782555_2783002_-	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA	NA|415aa|up_1|NZ_CP011131.1_2783242_2784487_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|99aa|up_0|NZ_CP011131.1_2784957_2785254_+	cd14738, PAAR_2, proline-alanine-alanine-arginine (PAAR) domain	NA|796aa|down_0|NZ_CP011131.1_2785759_2788147_-	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA|215aa|down_1|NZ_CP011131.1_2788189_2788834_-	pfam01471, PG_binding_1, Putative peptidoglycan binding domain	NA|763aa|down_2|NZ_CP011131.1_2788846_2791135_-	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein	NA|886aa|down_3|NZ_CP011131.1_2791265_2793923_-	TIGR03345, VI_ClpV1, type VI secretion ATPase, ClpV1 family	NA|369aa|down_4|NZ_CP011131.1_2793919_2795026_-	pfam06996, T6SS_TssG, Type VI secretion, TssG	NA|612aa|down_5|NZ_CP011131.1_2795036_2796872_-	TIGR03359, VI_chp_6, type VI secretion protein, VC_A0110 family	NA|330aa|down_6|NZ_CP011131.1_2797039_2798029_-	cd13575, PBP2_PnhD, Substrate binding domain of ABC-type phosphonate uptake system; contains the type 2 periplasmic binding fold	NA|229aa|down_7|NZ_CP011131.1_2798194_2798881_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|324aa|down_8|NZ_CP011131.1_2799156_2800128_+	cd14789, Tiki, Tiki homology domain antagonizes Wnt function via cleavage of amino-terminal residues	NA|470aa|down_9|NZ_CP011131.1_2800195_2801605_+	pfam05936, T6SS_VasE, Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE
GCF_001442805.1_ASM144280v1	NZ_CP011131	Lysobacter gummosus strain 3.2.11 chromosome, complete genome	13	3609445-3609559	11	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	Orphan	CTTTTCCGGGAAGGTACCGGCCGTTGGATCGG	32	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	NA|71aa|up_8|NZ_CP011131.1_3601554_3601767_+,NA|180aa|up_6|NZ_CP011131.1_3602682_3603222_-,NA|99aa|up_4|NZ_CP011131.1_3605139_3605436_-,NA|113aa|up_3|NZ_CP011131.1_3605501_3605840_-,NA|122aa|up_2|NZ_CP011131.1_3605906_3606272_-,NA	NA|572aa|up_9|NZ_CP011131.1_3599492_3601208_-	cd08650, FMT_core_HypX_N, HypX protein, N-terminal hydrolase domain	NA|71aa|up_8|NZ_CP011131.1_3601554_3601767_+	NA	NA|111aa|up_7|NZ_CP011131.1_3602197_3602530_+	cd02976, NrdH, NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile	NA|180aa|up_6|NZ_CP011131.1_3602682_3603222_-	NA	NA|492aa|up_5|NZ_CP011131.1_3603410_3604886_-	PRK11823, PRK11823, DNA repair protein RadA; Provisional	NA|99aa|up_4|NZ_CP011131.1_3605139_3605436_-	NA	NA|113aa|up_3|NZ_CP011131.1_3605501_3605840_-	NA	NA|122aa|up_2|NZ_CP011131.1_3605906_3606272_-	NA	NA|130aa|up_1|NZ_CP011131.1_3606396_3606786_-	cd07264, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|624aa|up_0|NZ_CP011131.1_3606955_3608827_-	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	NA|423aa|down_0|NZ_CP011131.1_3609854_3611123_+	COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]	NA|317aa|down_1|NZ_CP011131.1_3611165_3612116_-	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|177aa|down_2|NZ_CP011131.1_3612258_3612789_-	PRK00376, lspA, lipoprotein signal peptidase	NA|964aa|down_3|NZ_CP011131.1_3612865_3615757_-	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed	NA|345aa|down_4|NZ_CP011131.1_3615765_3616800_-	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase	NA|545aa|down_5|NZ_CP011131.1_3617029_3618664_-	cd13123, MATE_MurJ_like, MurJ/MviN, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|90aa|down_6|NZ_CP011131.1_3618816_3619086_+	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed	NA|356aa|down_7|NZ_CP011131.1_3619360_3620428_-	PRK12298, obgE, GTPase CgtA; Reviewed	NA|87aa|down_8|NZ_CP011131.1_3620607_3620868_-	PRK05435, rpmA, 50S ribosomal protein L27; Validated	NA|107aa|down_9|NZ_CP011131.1_3620880_3621201_-	PRK05573, rplU, 50S ribosomal protein L21; Validated
GCF_001442805.1_ASM144280v1	NZ_CP011131	Lysobacter gummosus strain 3.2.11 chromosome, complete genome	14	4968542-4968616	12	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	Orphan	GACCGGCGCGGGCTTGCCGGTGGCGAT	27	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	NA|260aa|up_4|NZ_CP011131.1_4961712_4962492_+,NA|310aa|up_2|NZ_CP011131.1_4963398_4964328_+,NA|150aa|down_2|NZ_CP011131.1_4972114_4972564_-,NA|85aa|down_9|NZ_CP011131.1_4985057_4985312_-	NA|303aa|up_9|NZ_CP011131.1_4955609_4956518_-	PRK15435, PRK15435, bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada	NA|741aa|up_8|NZ_CP011131.1_4956769_4958992_-	PRK11186, PRK11186, carboxy terminal-processing peptidase	NA|347aa|up_7|NZ_CP011131.1_4959332_4960373_-	PRK05481, PRK05481, lipoyl synthase; Provisional	NA|223aa|up_6|NZ_CP011131.1_4960534_4961203_-	PRK14342, PRK14342, lipoyl(octanoyl) transferase LipB	NA|93aa|up_5|NZ_CP011131.1_4961202_4961481_-	PRK00907, PRK00907, hypothetical protein; Provisional	NA|260aa|up_4|NZ_CP011131.1_4961712_4962492_+	NA	NA|191aa|up_3|NZ_CP011131.1_4962536_4963109_+	pfam03031, NIF, NLI interacting factor-like phosphatase	NA|310aa|up_2|NZ_CP011131.1_4963398_4964328_+	NA	NA|590aa|up_1|NZ_CP011131.1_4964631_4966401_+	cd08621, PI-PLCXDc_like_2, Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins	NA|418aa|up_0|NZ_CP011131.1_4966482_4967736_-	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]	NA|410aa|down_0|NZ_CP011131.1_4969590_4970820_-	TIGR02282, Membrane-bound_lytic_murein_transglycosylase_B, lytic murein transglycosylase B	NA|291aa|down_1|NZ_CP011131.1_4971217_4972090_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|150aa|down_2|NZ_CP011131.1_4972114_4972564_-	NA	NA|402aa|down_3|NZ_CP011131.1_4972849_4974055_+	PRK13656, PRK13656, enoyl-[acyl-carrier-protein] reductase FabV	NA|718aa|down_4|NZ_CP011131.1_4974505_4976659_-	COG3227, LasB, Zinc metalloprotease (elastase) [Amino acid transport and metabolism]	NA|966aa|down_5|NZ_CP011131.1_4977478_4980376_-	COG3710, CadC, DNA-binding winged-HTH domains [Transcription]	NA|73aa|down_6|NZ_CP011131.1_4980975_4981194_-	pfam14206, Cys_rich_CPCC, Cysteine-rich CPCC	NA|753aa|down_7|NZ_CP011131.1_4981542_4983801_-	pfam01471, PG_binding_1, Putative peptidoglycan binding domain	NA|297aa|down_8|NZ_CP011131.1_4983845_4984736_-	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|85aa|down_9|NZ_CP011131.1_4985057_4985312_-	NA
GCF_001442805.1_ASM144280v1	NZ_CP011131	Lysobacter gummosus strain 3.2.11 chromosome, complete genome	15	5033473-5033553	13	CRISPRCasFinder	no	WYL	WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	Unclear	TGGATTCCCGCTTTCGCGGGAATGACGG	28	0	0	NA	NA	I-E	1	1	Orphan	WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	NA|195aa|up_7|NZ_CP011131.1_5025305_5025890_+,NA|68aa|up_6|NZ_CP011131.1_5025944_5026148_-,NA|66aa|up_4|NZ_CP011131.1_5029219_5029417_+,NA|122aa|down_4|NZ_CP011131.1_5037619_5037985_+,NA|196aa|down_9|NZ_CP011131.1_5045041_5045629_-	NA|313aa|up_9|NZ_CP011131.1_5023309_5024248_-	cd07228, Pat_NTE_like_bacteria, Bacterial patatin-like phospholipase domain containing protein 6	WYL|323aa|up_8|NZ_CP011131.1_5024247_5025216_-	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|195aa|up_7|NZ_CP011131.1_5025305_5025890_+	NA	NA|68aa|up_6|NZ_CP011131.1_5025944_5026148_-	NA	NA|967aa|up_5|NZ_CP011131.1_5026257_5029158_+	cd02763, MopB_2, The MopB_2 CD includes a group of related uncharacterized bacterial molybdopterin-binding oxidoreductase-like domains with a putative N-terminal iron-sulfur [4Fe-4S] cluster binding site and molybdopterin cofactor binding site	NA|66aa|up_4|NZ_CP011131.1_5029219_5029417_+	NA	NA|283aa|up_3|NZ_CP011131.1_5029413_5030262_+	cd10551, PsrB, polysulfide reductase beta (PsrB) subunit	NA|311aa|up_2|NZ_CP011131.1_5030343_5031276_+	pfam04976, DmsC, DMSO reductase anchor subunit (DmsC)	NA|225aa|up_1|NZ_CP011131.1_5031493_5032168_+	COG3137, COG3137, Putative salt-induced outer membrane protein [Cell envelope biogenesis, outer membrane]	NA|314aa|up_0|NZ_CP011131.1_5032360_5033302_-	PRK00072, hemC, porphobilinogen deaminase; Reviewed	NA|245aa|down_0|NZ_CP011131.1_5033600_5034335_-	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms]	NA|379aa|down_1|NZ_CP011131.1_5034352_5035489_-	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|231aa|down_2|NZ_CP011131.1_5035500_5036193_-	pfam02230, Abhydrolase_2, Phospholipase/Carboxylesterase	NA|354aa|down_3|NZ_CP011131.1_5036293_5037355_-	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal	NA|122aa|down_4|NZ_CP011131.1_5037619_5037985_+	NA	NA|447aa|down_5|NZ_CP011131.1_5038091_5039432_+	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|327aa|down_6|NZ_CP011131.1_5039428_5040409_+	TIGR00999, Nickel-cobalt-cadmium_resistance_protein_NccB, Membrane Fusion Protein cluster 2 (function with RND porters)	NA|1073aa|down_7|NZ_CP011131.1_5040449_5043668_+	TIGR00914, Nickel-cobalt-cadmium_resistance_protein_NccA, heavy metal efflux pump, CzcA family	NA|301aa|down_8|NZ_CP011131.1_5043785_5044688_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|196aa|down_9|NZ_CP011131.1_5045041_5045629_-	NA
GCF_001442805.1_ASM144280v1	NZ_CP011131	Lysobacter gummosus strain 3.2.11 chromosome, complete genome	16	6022264-6022368	14	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	Orphan	CCCGCGTTCGCGGGAATGACGGCCTG	26	1	2	6022290-6022342|6022290-6022342	NZ_CP011131.1_3051811-3051759|NZ_CP011131.1_3407068-3407120	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,Cas9_archaeal,DinG,RT	NA|71aa|up_5|NZ_CP011131.1_6016410_6016623_-,NA|100aa|up_2|NZ_CP011131.1_6018724_6019024_-,NA|588aa|down_4|NZ_CP011131.1_6025894_6027658_+	NA|171aa|up_9|NZ_CP011131.1_6013903_6014416_+	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|133aa|up_8|NZ_CP011131.1_6014693_6015092_-	PRK01842, PRK01842, hypothetical protein; Provisional	NA|236aa|up_7|NZ_CP011131.1_6015163_6015871_+	TIGR02292, Hypothetical_protein_yecA	NA|147aa|up_6|NZ_CP011131.1_6016005_6016446_+	COG0727, COG0727, Predicted Fe-S-cluster oxidoreductase [General function prediction only]	NA|71aa|up_5|NZ_CP011131.1_6016410_6016623_-	NA	NA|153aa|up_4|NZ_CP011131.1_6016619_6017078_-	pfam13451, zf-trcl, Probable zinc-ribbon domain	NA|443aa|up_3|NZ_CP011131.1_6017297_6018626_+	PRK07006, PRK07006, isocitrate dehydrogenase; Reviewed	NA|100aa|up_2|NZ_CP011131.1_6018724_6019024_-	NA	NA|339aa|up_1|NZ_CP011131.1_6019114_6020131_-	pfam14247, DUF4344, Putative metallopeptidase	NA|577aa|up_0|NZ_CP011131.1_6020397_6022128_+	pfam06315, AceK, Isocitrate dehydrogenase kinase/phosphatase (AceK)	NA|84aa|down_0|NZ_CP011131.1_6022393_6022645_-	cd13888, CuRO_3_McoP_like, The third cupredoxin domain of multicopper oxidase McoP and similar proteins	NA|330aa|down_1|NZ_CP011131.1_6022832_6023822_+	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|303aa|down_2|NZ_CP011131.1_6023940_6024849_+	COG4798, COG4798, Predicted methyltransferase [General function prediction only]	NA|178aa|down_3|NZ_CP011131.1_6025005_6025539_+	cd02566, PseudoU_synth_RluE, Pseudouridine synthase, Escherichia coli RluE	NA|588aa|down_4|NZ_CP011131.1_6025894_6027658_+	NA	NA|322aa|down_5|NZ_CP011131.1_6027721_6028687_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|319aa|down_6|NZ_CP011131.1_6028831_6029788_-	cd19081, AKR_AKR9C1, AKR9C family of aldo-keto reductase (AKR)	NA|345aa|down_7|NZ_CP011131.1_6030108_6031143_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|122aa|down_8|NZ_CP011131.1_6031378_6031744_-	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|849aa|down_9|NZ_CP011131.1_6031963_6034510_-	TIGR01970, ATP-dependent_RNA_helicase_HrpB, ATP-dependent helicase HrpB
