The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP011131	Lysobacter gummosus strain 3.2.11 chromosome, complete genome	6056618	3902721	3992751	6056618	portal,head,capsid,terminase,protease,tRNA,transposase,tail,plate	Stenotrophomonas_phage(27.5%)	83	NA	NA
WP_057943703.1|3902721_3905130_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_057943704.1|3905263_3906274_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	39.7	7.3e-33
WP_148648952.1|3906385_3906658_-	hypothetical protein	NA	NA	NA	NA	NA
WP_057943706.1|3906809_3907169_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_027083463.1|3907181_3907379_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_148648953.1|3907589_3908351_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083512912.1|3908508_3909057_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	35.2	3.5e-13
WP_057943708.1|3909106_3911008_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	35.7	3.4e-124
WP_057943709.1|3911559_3913377_+	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	28.8	2.6e-44
WP_057943710.1|3913373_3914510_+	hypothetical protein	NA	NA	NA	NA	NA
WP_187313031.1|3914653_3914821_-	hypothetical protein	NA	NA	NA	NA	NA
WP_057943711.1|3915476_3917507_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
WP_057943712.1|3917665_3918118_-	type IV pilin protein	NA	NA	NA	NA	NA
WP_057943713.1|3918130_3921943_-	hypothetical protein	NA	NA	NA	NA	NA
WP_057943714.1|3921953_3922472_-	hypothetical protein	NA	NA	NA	NA	NA
WP_187313032.1|3922480_3923680_-	PilW family protein	NA	NA	NA	NA	NA
WP_057943716.1|3923721_3924213_-	type IV pilus modification protein PilV	NA	NA	NA	NA	NA
WP_187313033.1|3924209_3924686_-	GspH/FimT family pseudopilin	NA	NA	NA	NA	NA
WP_057943718.1|3924970_3925636_+	GspH/FimT family pseudopilin	NA	NA	NA	NA	NA
WP_057943719.1|3925964_3927035_-	macro domain-containing protein	NA	A0A0B4N0V6	Escherichia_phage	37.9	3.5e-17
WP_148648955.1|3927034_3927172_-	DUF4433 domain-containing protein	NA	NA	NA	NA	NA
WP_148648703.1|3927209_3928350_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	60.2	1.0e-91
WP_083512583.1|3928358_3928892_-	DUF4433 domain-containing protein	NA	NA	NA	NA	NA
WP_148648956.1|3929740_3930724_+	hypothetical protein	NA	NA	NA	NA	NA
WP_187313034.1|3930812_3933617_+	chromosome segregation protein SMC	NA	A0A1B1IUG5	uncultured_Mediterranean_phage	21.8	3.7e-10
WP_057945532.1|3934974_3935601_+	DUF1629 domain-containing protein	NA	NA	NA	NA	NA
WP_083512585.1|3935652_3939237_+	peptidoglycan-binding protein	NA	NA	NA	NA	NA
WP_148648958.1|3939350_3939977_-	hypothetical protein	NA	NA	NA	NA	NA
WP_057943723.1|3940081_3941089_-|portal	phage portal protein	portal	A4PE27	Ralstonia_virus	64.2	6.6e-127
WP_057943724.1|3941088_3942849_-|terminase	terminase ATPase subunit family protein	terminase	E5FFI8	Burkholderia_phage	67.2	3.9e-231
WP_083512913.1|3942989_3943832_+|capsid	GPO family capsid scaffolding protein	capsid	A0A2H4J928	uncultured_Caudovirales_phage	51.1	3.4e-60
WP_057943726.1|3943874_3944888_+|capsid	phage major capsid protein, P2 family	capsid	A4PE30	Ralstonia_virus	60.9	6.9e-116
WP_057943727.1|3944891_3945626_+	hypothetical protein	NA	K4NX86	Burkholderia_phage	54.5	3.0e-52
WP_057943728.1|3945755_3946229_+|head	head completion/stabilization protein	head	E5E3S2	Burkholderia_phage	45.0	1.3e-27
WP_057943729.1|3946228_3946438_+|tail	tail protein X	tail	Q94MF6	Enterobacteria_phage	59.4	2.0e-14
WP_148648959.1|3946446_3946845_+	hypothetical protein	NA	NA	NA	NA	NA
WP_057943731.1|3946841_3947255_+	hypothetical protein	NA	NA	NA	NA	NA
WP_057943732.1|3947244_3947883_+	glycoside hydrolase family 19 protein	NA	V9IQK6	Stenotrophomonas_phage	57.1	9.0e-45
WP_057943733.1|3947879_3948368_+	hypothetical protein	NA	V9IQW8	Stenotrophomonas_phage	61.8	4.6e-25
WP_057943734.1|3948364_3948802_+|tail	phage tail protein	tail	A0A2H4J906	uncultured_Caudovirales_phage	47.4	2.9e-26
WP_083512586.1|3948798_3949266_+	phage virion morphogenesis protein	NA	E5FFH6	Burkholderia_phage	51.7	1.5e-33
WP_148648960.1|3949400_3951689_+	hypothetical protein	NA	A0A1L2BY82	Clostridium_phage	25.6	8.5e-45
WP_148648961.1|3951708_3952173_-	hypothetical protein	NA	NA	NA	NA	NA
WP_057943738.1|3952317_3953208_+|plate	baseplate J/gp47 family protein	plate	V9IQV9	Stenotrophomonas_phage	54.7	1.7e-86
WP_057943739.1|3953200_3953767_+|tail	phage tail protein I	tail	V9IQK7	Stenotrophomonas_phage	51.4	1.5e-48
WP_148648962.1|3953763_3955491_+|tail	tail fiber domain-containing protein	tail	V9IQX0	Stenotrophomonas_phage	36.5	3.6e-80
WP_057943741.1|3955493_3956123_+	hypothetical protein	NA	V9IQM3	Stenotrophomonas_phage	37.9	5.6e-23
WP_057943742.1|3956201_3956774_+|plate	phage baseplate assembly protein V	plate	V9IQH1	Stenotrophomonas_phage	61.9	7.3e-30
WP_057943743.1|3956770_3957127_+	GPW/gp25 family protein	NA	V9IQW0	Stenotrophomonas_phage	64.1	2.2e-32
WP_187313202.1|3957232_3958312_+|tail	phage tail sheath protein	tail	E5FFG9	Burkholderia_phage	61.8	6.6e-125
WP_057943745.1|3958334_3958847_+|tail	phage major tail tube protein	tail	V9IQX1	Stenotrophomonas_phage	59.2	1.8e-51
WP_083512587.1|3958901_3959240_+|tail	phage tail assembly protein	tail	A4PE51	Ralstonia_virus	50.0	1.2e-19
WP_083512588.1|3959248_3959365_+|tail	GpE family phage tail protein	tail	E5E3U7	Burkholderia_phage	77.1	3.2e-09
WP_057943746.1|3959361_3962328_+|tail	phage tail tape measure protein	tail	E5G6Q1	Salmonella_phage	33.2	1.0e-95
WP_057943747.1|3962331_3962739_+|tail	phage tail protein	tail	A0A2H4JG54	uncultured_Caudovirales_phage	61.6	5.7e-37
WP_057943748.1|3962735_3963728_+	phage late control D family protein	NA	E5FFG3	Burkholderia_phage	51.5	5.1e-87
WP_187313035.1|3964302_3964734_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_083512590.1|3964810_3965026_+	DNA-binding protein	NA	A0A2H4JE67	uncultured_Caudovirales_phage	53.6	1.5e-07
WP_148649209.1|3965046_3965304_+	ogr/Delta-like zinc finger family protein	NA	E5E3T8	Burkholderia_phage	51.3	1.6e-13
WP_057943749.1|3965410_3968059_+	toprim domain-containing protein	NA	A0A077K8T2	Ralstonia_phage	50.0	3.5e-252
WP_148648964.1|3968126_3968747_+	hypothetical protein	NA	NA	NA	NA	NA
WP_083512592.1|3969452_3969674_+	hypothetical protein	NA	V9IQX6	Stenotrophomonas_phage	57.1	1.7e-11
WP_057943751.1|3969673_3970897_+	hypothetical protein	NA	V9IQN0	Stenotrophomonas_phage	52.1	8.1e-111
WP_057943752.1|3971139_3972522_-	LOG family protein	NA	NA	NA	NA	NA
WP_057943753.1|3972756_3975981_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_057943754.1|3976412_3977006_-	YhgN family NAAT transporter	NA	NA	NA	NA	NA
WP_057945534.1|3977017_3977746_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_057943755.1|3977778_3978099_-	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA	NA
WP_057943756.1|3978291_3978870_+	superoxide dismutase	NA	NA	NA	NA	NA
WP_057943757.1|3979023_3980901_+	hypothetical protein	NA	NA	NA	NA	NA
WP_057943758.1|3981060_3981576_+	hypothetical protein	NA	NA	NA	NA	NA
WP_057943759.1|3981736_3982876_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_057943760.1|3982872_3983412_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	39.2	3.0e-17
WP_057943761.1|3983476_3983746_+	hypothetical protein	NA	NA	NA	NA	NA
WP_057943762.1|3983742_3984636_+	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA	NA
WP_057943763.1|3984675_3984999_+	DUF3301 domain-containing protein	NA	NA	NA	NA	NA
WP_083512593.1|3985346_3985844_-|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	46.9	2.6e-23
WP_057945536.1|3986147_3986783_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_057943764.1|3986961_3987705_-	cytochrome c1	NA	NA	NA	NA	NA
WP_057943765.1|3987781_3989041_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_057943766.1|3989044_3989656_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_057943767.1|3990057_3991071_-	lytic transglycosylase domain-containing protein	NA	A0A0S2SXL7	Bacillus_phage	52.0	1.9e-25
WP_057943768.1|3991323_3992751_+|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
>prophage 2
NZ_CP011131	Lysobacter gummosus strain 3.2.11 chromosome, complete genome	6056618	5463998	5487206	6056618	head,capsid,portal,terminase	Pseudomonas_phage(22.22%)	25	NA	NA
WP_057944723.1|5463998_5466212_-	hypothetical protein	NA	Q5ZQV9	Pseudomonas_phage	51.9	1.1e-206
WP_057944724.1|5466198_5466420_-	hypothetical protein	NA	H6V8R0	Pseudomonas_phage	50.0	1.0e-11
WP_083512760.1|5466571_5467999_+	hypothetical protein	NA	NA	NA	NA	NA
WP_057944725.1|5468005_5468242_-	hypothetical protein	NA	Q6UYJ6	Burkholderia_phage	60.3	2.4e-19
WP_057944726.1|5468256_5469072_-	phage BR0599 family protein	NA	K4I436	Providencia_phage	41.5	4.6e-62
WP_057944727.1|5469068_5470784_-	hypothetical protein	NA	Q5ZQW3	Pseudomonas_phage	50.3	9.5e-142
WP_057944728.1|5470796_5471732_-	hypothetical protein	NA	A0A2D1GMS8	Marinobacter_phage	25.1	2.8e-18
WP_057944729.1|5471731_5473306_-	hypothetical protein	NA	A0A2D2W2B4	Stenotrophomonas_phage	40.5	2.2e-108
WP_148649094.1|5473341_5473929_+	hypothetical protein	NA	NA	NA	NA	NA
WP_057944731.1|5473903_5476594_-	tape measure protein	NA	K7RVL7	Vibrio_phage	37.0	4.1e-38
WP_057944732.1|5476661_5477051_-	hypothetical protein	NA	NA	NA	NA	NA
WP_057944733.1|5477047_5477524_-	glycoside hydrolase family 104 protein	NA	A0A1W6JT17	Escherichia_phage	53.4	3.2e-39
WP_057944734.1|5477504_5477726_-	hypothetical protein	NA	A0A0B5A601	Paracoccus_phage	34.3	1.3e-06
WP_057944735.1|5477907_5478339_-	hypothetical protein	NA	NA	NA	NA	NA
WP_057944736.1|5478338_5479097_-	hypothetical protein	NA	A0A0S4L1I6	Pseudomonas_phage	48.6	3.4e-59
WP_057944737.1|5479149_5479698_-	hypothetical protein	NA	NA	NA	NA	NA
WP_057944738.1|5479697_5480126_-	hypothetical protein	NA	NA	NA	NA	NA
WP_057944739.1|5480118_5480409_-	hypothetical protein	NA	NA	NA	NA	NA
WP_057945678.1|5480413_5481415_-|capsid	major capsid protein	capsid	Q9JMM2	Wolbachia_phage	62.5	2.3e-116
WP_057944740.1|5481424_5481817_-|head	head decoration protein	head	A0A1B2LRT0	Wolbachia_phage	50.4	5.9e-23
WP_057944741.1|5481816_5482992_-	S49 family peptidase	NA	K4HZZ6	Acidithiobacillus_phage	42.4	2.9e-65
WP_057944742.1|5482988_5484485_-|portal	phage portal protein	portal	A0A1B2LRR5	Wolbachia_phage	56.3	8.9e-144
WP_057944743.1|5484486_5484705_-	hypothetical protein	NA	A0A2H4JCJ9	uncultured_Caudovirales_phage	60.9	5.2e-13
WP_148649232.1|5484701_5486603_-|terminase	phage terminase large subunit family protein	terminase	A0A2H4JIC6	uncultured_Caudovirales_phage	68.6	4.3e-252
WP_057944745.1|5486654_5487206_-	hypothetical protein	NA	A0A2H4JCL4	uncultured_Caudovirales_phage	59.2	4.4e-48
>prophage 3
NZ_CP011131	Lysobacter gummosus strain 3.2.11 chromosome, complete genome	6056618	5498733	5510723	6056618		Acidithiobacillus_phage(75.0%)	14	NA	NA
WP_057945679.1|5498733_5499204_-	hypothetical protein	NA	K4ICN3	Acidithiobacillus_phage	65.5	2.2e-48
WP_057944760.1|5499331_5501626_-	hypothetical protein	NA	K4HZY1	Acidithiobacillus_phage	62.1	2.0e-280
WP_148649098.1|5501622_5502471_-	ParB N-terminal domain-containing protein	NA	R4W339	Alteromonas_phage	40.0	3.7e-06
WP_148649099.1|5502467_5503364_-	hypothetical protein	NA	R4JHP8	Mycobacterium_phage	29.8	3.0e-22
WP_057944763.1|5503378_5504128_-	hypothetical protein	NA	K4HZA0	Acidithiobacillus_phage	60.2	1.7e-79
WP_148649100.1|5504181_5504562_-	hypothetical protein	NA	K4I3X7	Acidithiobacillus_phage	36.0	2.4e-13
WP_057944765.1|5504625_5505246_-	hypothetical protein	NA	K4ICM8	Acidithiobacillus_phage	53.5	5.1e-53
WP_057944766.1|5505260_5506088_-	ATP-binding protein	NA	K4HZX9	Acidithiobacillus_phage	65.6	4.2e-103
WP_057944767.1|5506122_5506593_-	hypothetical protein	NA	K4HZ96	Acidithiobacillus_phage	45.1	7.3e-28
WP_057945680.1|5506589_5506796_-	helix-turn-helix domain-containing protein	NA	A0A0K0N7A4	Gordonia_phage	44.2	1.3e-05
WP_148649101.1|5507449_5508358_+	hypothetical protein	NA	NA	NA	NA	NA
WP_148649102.1|5508535_5509003_+	DUF2924 domain-containing protein	NA	K4I3X1	Acidithiobacillus_phage	36.4	2.1e-11
WP_057944770.1|5509002_5509392_+	recombinase family protein	NA	NA	NA	NA	NA
WP_057944771.1|5509388_5510723_+	recombinase family protein	NA	K4ICM1	Acidithiobacillus_phage	50.6	5.4e-108
