assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001420975.1_ASM142097v1	NZ_CP012181	Pseudonocardia sp. EC080610-09 chromosome, complete genome	1	1109570-1109714	1	CRISPRCasFinder	no		cas3,csa3,WYL,DEDDh,cas4,DinG	Orphan	CAGCTCGCGCAACGGGTCCACGGC	24	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,WYL,DEDDh,cas4,DinG	NA|125aa|up_1|NZ_CP012181.1_1108140_1108515_+,NA|79aa|down_9|NZ_CP012181.1_1119882_1120119_-	NA|306aa|up_9|NZ_CP012181.1_1101095_1102013_-	TIGR01496, Dihydropteroate_synthase, dihydropteroate synthase	NA|339aa|up_8|NZ_CP012181.1_1102058_1103075_-	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]	NA|211aa|up_7|NZ_CP012181.1_1103185_1103818_-	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism]	NA|299aa|up_6|NZ_CP012181.1_1103881_1104778_-	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs	NA|119aa|up_5|NZ_CP012181.1_1104922_1105279_+	cd01282, HTH_MerR-like_sg3, Helix-Turn-Helix DNA binding domain of putative transcription regulators from the MerR superfamily	NA|403aa|up_4|NZ_CP012181.1_1105298_1106507_-	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|177aa|up_3|NZ_CP012181.1_1106538_1107069_-	pfam02036, SCP2, SCP-2 sterol transfer family	NA|213aa|up_2|NZ_CP012181.1_1107169_1107808_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|125aa|up_1|NZ_CP012181.1_1108140_1108515_+	NA	NA|203aa|up_0|NZ_CP012181.1_1108583_1109192_-	pfam01323, DSBA, DSBA-like thioredoxin domain	NA|241aa|down_0|NZ_CP012181.1_1110741_1111464_-	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional	NA|155aa|down_1|NZ_CP012181.1_1111656_1112121_+	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|212aa|down_2|NZ_CP012181.1_1112142_1112778_-	pfam02293, AmiS_UreI, AmiS/UreI family transporter	NA|418aa|down_3|NZ_CP012181.1_1112908_1114162_-	pfam03069, FmdA_AmdA, Acetamidase/Formamidase family	NA|96aa|down_4|NZ_CP012181.1_1114225_1114513_-	smart00834, CxxC_CXXC_SSSS, Putative regulatory protein	NA|362aa|down_5|NZ_CP012181.1_1114589_1115675_-	cd06358, PBP1_NHase, type 1 periplasmic-binding protein of the nitrile hydratase (NHase) system that selectively converts nitriles to corresponding amides	NA|151aa|down_6|NZ_CP012181.1_1115738_1116191_+	COG1846, MarR, Transcriptional regulators [Transcription]	NA|233aa|down_7|NZ_CP012181.1_1116220_1116919_-	COG1802, GntR, Transcriptional regulators [Transcription]	NA|946aa|down_8|NZ_CP012181.1_1117090_1119928_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|79aa|down_9|NZ_CP012181.1_1119882_1120119_-	NA
GCF_001420975.1_ASM142097v1	NZ_CP012181	Pseudonocardia sp. EC080610-09 chromosome, complete genome	2	1109900-1110044	2	CRISPRCasFinder	no		cas3,csa3,WYL,DEDDh,cas4,DinG	Orphan	CAGCTCGCGCAACGGGTCCACGGC	24	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,WYL,DEDDh,cas4,DinG	NA|125aa|up_1|NZ_CP012181.1_1108140_1108515_+,NA|79aa|down_9|NZ_CP012181.1_1119882_1120119_-	NA|306aa|up_9|NZ_CP012181.1_1101095_1102013_-	TIGR01496, Dihydropteroate_synthase, dihydropteroate synthase	NA|339aa|up_8|NZ_CP012181.1_1102058_1103075_-	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]	NA|211aa|up_7|NZ_CP012181.1_1103185_1103818_-	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism]	NA|299aa|up_6|NZ_CP012181.1_1103881_1104778_-	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs	NA|119aa|up_5|NZ_CP012181.1_1104922_1105279_+	cd01282, HTH_MerR-like_sg3, Helix-Turn-Helix DNA binding domain of putative transcription regulators from the MerR superfamily	NA|403aa|up_4|NZ_CP012181.1_1105298_1106507_-	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|177aa|up_3|NZ_CP012181.1_1106538_1107069_-	pfam02036, SCP2, SCP-2 sterol transfer family	NA|213aa|up_2|NZ_CP012181.1_1107169_1107808_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|125aa|up_1|NZ_CP012181.1_1108140_1108515_+	NA	NA|203aa|up_0|NZ_CP012181.1_1108583_1109192_-	pfam01323, DSBA, DSBA-like thioredoxin domain	NA|241aa|down_0|NZ_CP012181.1_1110741_1111464_-	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional	NA|155aa|down_1|NZ_CP012181.1_1111656_1112121_+	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|212aa|down_2|NZ_CP012181.1_1112142_1112778_-	pfam02293, AmiS_UreI, AmiS/UreI family transporter	NA|418aa|down_3|NZ_CP012181.1_1112908_1114162_-	pfam03069, FmdA_AmdA, Acetamidase/Formamidase family	NA|96aa|down_4|NZ_CP012181.1_1114225_1114513_-	smart00834, CxxC_CXXC_SSSS, Putative regulatory protein	NA|362aa|down_5|NZ_CP012181.1_1114589_1115675_-	cd06358, PBP1_NHase, type 1 periplasmic-binding protein of the nitrile hydratase (NHase) system that selectively converts nitriles to corresponding amides	NA|151aa|down_6|NZ_CP012181.1_1115738_1116191_+	COG1846, MarR, Transcriptional regulators [Transcription]	NA|233aa|down_7|NZ_CP012181.1_1116220_1116919_-	COG1802, GntR, Transcriptional regulators [Transcription]	NA|946aa|down_8|NZ_CP012181.1_1117090_1119928_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|79aa|down_9|NZ_CP012181.1_1119882_1120119_-	NA
GCF_001420975.1_ASM142097v1	NZ_CP012181	Pseudonocardia sp. EC080610-09 chromosome, complete genome	3	1110140-1110283	3	CRISPRCasFinder	no		cas3,csa3,WYL,DEDDh,cas4,DinG	Orphan	CAGCTCGCGCAACGGGTCCACGGC	24	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,WYL,DEDDh,cas4,DinG	NA|125aa|up_1|NZ_CP012181.1_1108140_1108515_+,NA|79aa|down_9|NZ_CP012181.1_1119882_1120119_-	NA|306aa|up_9|NZ_CP012181.1_1101095_1102013_-	TIGR01496, Dihydropteroate_synthase, dihydropteroate synthase	NA|339aa|up_8|NZ_CP012181.1_1102058_1103075_-	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]	NA|211aa|up_7|NZ_CP012181.1_1103185_1103818_-	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism]	NA|299aa|up_6|NZ_CP012181.1_1103881_1104778_-	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs	NA|119aa|up_5|NZ_CP012181.1_1104922_1105279_+	cd01282, HTH_MerR-like_sg3, Helix-Turn-Helix DNA binding domain of putative transcription regulators from the MerR superfamily	NA|403aa|up_4|NZ_CP012181.1_1105298_1106507_-	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|177aa|up_3|NZ_CP012181.1_1106538_1107069_-	pfam02036, SCP2, SCP-2 sterol transfer family	NA|213aa|up_2|NZ_CP012181.1_1107169_1107808_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|125aa|up_1|NZ_CP012181.1_1108140_1108515_+	NA	NA|203aa|up_0|NZ_CP012181.1_1108583_1109192_-	pfam01323, DSBA, DSBA-like thioredoxin domain	NA|241aa|down_0|NZ_CP012181.1_1110741_1111464_-	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional	NA|155aa|down_1|NZ_CP012181.1_1111656_1112121_+	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|212aa|down_2|NZ_CP012181.1_1112142_1112778_-	pfam02293, AmiS_UreI, AmiS/UreI family transporter	NA|418aa|down_3|NZ_CP012181.1_1112908_1114162_-	pfam03069, FmdA_AmdA, Acetamidase/Formamidase family	NA|96aa|down_4|NZ_CP012181.1_1114225_1114513_-	smart00834, CxxC_CXXC_SSSS, Putative regulatory protein	NA|362aa|down_5|NZ_CP012181.1_1114589_1115675_-	cd06358, PBP1_NHase, type 1 periplasmic-binding protein of the nitrile hydratase (NHase) system that selectively converts nitriles to corresponding amides	NA|151aa|down_6|NZ_CP012181.1_1115738_1116191_+	COG1846, MarR, Transcriptional regulators [Transcription]	NA|233aa|down_7|NZ_CP012181.1_1116220_1116919_-	COG1802, GntR, Transcriptional regulators [Transcription]	NA|946aa|down_8|NZ_CP012181.1_1117090_1119928_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|79aa|down_9|NZ_CP012181.1_1119882_1120119_-	NA
GCF_001420975.1_ASM142097v1	NZ_CP012181	Pseudonocardia sp. EC080610-09 chromosome, complete genome	4	2065207-2065287	4	CRISPRCasFinder	no		cas3,csa3,WYL,DEDDh,cas4,DinG	Orphan	GCCCGGCGCTGGGGAGCGGCCGG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,WYL,DEDDh,cas4,DinG	NA|366aa|up_1|NZ_CP012181.1_2060592_2061690_+,NA|111aa|down_5|NZ_CP012181.1_2073807_2074140_+	NA|245aa|up_9|NZ_CP012181.1_2049324_2050059_-	pfam01551, Peptidase_M23, Peptidase family M23	NA|338aa|up_8|NZ_CP012181.1_2050906_2051920_-	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]	NA|392aa|up_7|NZ_CP012181.1_2052195_2053371_+	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta	NA|296aa|up_6|NZ_CP012181.1_2053376_2054264_+	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated	NA|473aa|up_5|NZ_CP012181.1_2054417_2055836_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|583aa|up_4|NZ_CP012181.1_2056027_2057776_+	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|205aa|up_3|NZ_CP012181.1_2057966_2058581_+	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed	NA|521aa|up_2|NZ_CP012181.1_2058577_2060140_+	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|366aa|up_1|NZ_CP012181.1_2060592_2061690_+	NA	NA|509aa|up_0|NZ_CP012181.1_2063354_2064881_-	cd03876, M28_SGAP_like, M28 Zn-peptidase Streptomyces griseus aminopeptidase and similar proteins	NA|1119aa|down_0|NZ_CP012181.1_2065376_2068733_+	PRK05672, dnaE2, error-prone DNA polymerase; Validated	NA|220aa|down_1|NZ_CP012181.1_2068814_2069474_-	pfam01184, Grp1_Fun34_YaaH, GPR1/FUN34/yaaH family	NA|284aa|down_2|NZ_CP012181.1_2069705_2070557_+	PRK14193, PRK14193, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	NA|103aa|down_3|NZ_CP012181.1_2070591_2070900_+	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|744aa|down_4|NZ_CP012181.1_2071326_2073558_-	pfam03971, IDH, Monomeric isocitrate dehydrogenase	NA|111aa|down_5|NZ_CP012181.1_2073807_2074140_+	NA	NA|282aa|down_6|NZ_CP012181.1_2074182_2075028_+	cd10281, Nape_like_AP-endo, Neisseria meningitides Nape-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases	NA|278aa|down_7|NZ_CP012181.1_2075024_2075858_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|170aa|down_8|NZ_CP012181.1_2075899_2076409_+	cd04333, ProX_deacylase, This CD, composed mainly of bacterial single-domain proteins, includes the Thermus thermophilus (Tt) YbaK-like protein, a homolog of the trans-acting Escherichia coli YbaK Cys-tRNA(Pro) deacylase and the Agrobacterium tumefaciens  ProX Ala-tRNA(Pro) deacylase and also the cis-acting prolyl-tRNA synthetase-editing domain (ProRS-INS)	NA|863aa|down_9|NZ_CP012181.1_2076490_2079079_+	PRK09234, fbiC, FO synthase; Reviewed
GCF_001420975.1_ASM142097v1	NZ_CP012181	Pseudonocardia sp. EC080610-09 chromosome, complete genome	5	2316048-2316134	5	CRISPRCasFinder	no		cas3,csa3,WYL,DEDDh,cas4,DinG	Orphan	GGGCGTCACGCACCCCGTCGCCGTGC	26	1	1	2316074-2316108	NZ_CP012181.1_2316135-2316169	NA	1	1	Orphan	cas3,csa3,WYL,DEDDh,cas4,DinG	NA|113aa|up_8|NZ_CP012181.1_2304457_2304796_-,NA|141aa|down_9|NZ_CP012181.1_2324338_2324761_-	NA|284aa|up_9|NZ_CP012181.1_2303598_2304450_+	pfam06724, DUF1206, Domain of Unknown Function (DUF1206)	NA|113aa|up_8|NZ_CP012181.1_2304457_2304796_-	NA	NA|673aa|up_7|NZ_CP012181.1_2305008_2307027_+	cd03681, MM_CoA_mutase_MeaA, Coenzyme B12-dependent-methylmalonyl coenzyme A (CoA) mutase (MCM) family, MeaA-like subfamily; contains various methylmalonyl coenzyme A (CoA) mutase (MCM)-like proteins similar to the Streptomyces cinnamonensis MeaA, Methylobacterium extorquens MeaA and Streptomyces collinus B12-dependent mutase	NA|641aa|up_6|NZ_CP012181.1_2307045_2308968_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|246aa|up_5|NZ_CP012181.1_2308964_2309702_-	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins	NA|357aa|up_4|NZ_CP012181.1_2309717_2310788_-	PRK02224, PRK02224, DNA double-strand break repair Rad50 ATPase	NA|297aa|up_3|NZ_CP012181.1_2310823_2311714_-	cd01002, PBP2_Ehub_like, Substrate binding domain of ectoine/hydroxyectoine specific ABC transport system; the type 2 periplasmic binding protein fold	NA|258aa|up_2|NZ_CP012181.1_2311738_2312512_-	PRK08139, PRK08139, enoyl-CoA hydratase; Validated	NA|411aa|up_1|NZ_CP012181.1_2313379_2314612_+	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|289aa|up_0|NZ_CP012181.1_2315031_2315898_-	cd08420, PBP2_CysL_like, C-terminal substrate binding domain of LysR-type transcriptional regulator CysL, which activates the transcription of the cysJI operon encoding sulfite reductase, contains the type 2 periplasmic binding fold	NA|346aa|down_0|NZ_CP012181.1_2316445_2317483_-	TIGR02880, Protein_CbxX_chromosomal, probable Rubsico expression protein CbbX	NA|153aa|down_1|NZ_CP012181.1_2317469_2317928_-	CHL00130, rbcS, ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit; Reviewed	NA|477aa|down_2|NZ_CP012181.1_2317942_2319373_-	cd08212, RuBisCO_large_I, Ribulose bisphosphate carboxylase large chain, Form I	NA|411aa|down_3|NZ_CP012181.1_2319397_2320630_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|221aa|down_4|NZ_CP012181.1_2320626_2321289_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|315aa|down_5|NZ_CP012181.1_2321397_2322342_+	PRK07429, PRK07429, phosphoribulokinase; Provisional	NA|254aa|down_6|NZ_CP012181.1_2322338_2323100_+	cd07528, HAD_CbbY-like, subfamily of beta-phosphoglucomutase-like family, similar to Rhodobacter sphaeroides xylulose-1,5-bisphosphate phosphatase CbbY	NA|169aa|down_7|NZ_CP012181.1_2323051_2323558_-	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate	NA|220aa|down_8|NZ_CP012181.1_2323665_2324325_+	PRK03298, PRK03298, endonuclease NucS	NA|141aa|down_9|NZ_CP012181.1_2324338_2324761_-	NA
GCF_001420975.1_ASM142097v1	NZ_CP012181	Pseudonocardia sp. EC080610-09 chromosome, complete genome	6	4656620-4656748	6	CRISPRCasFinder	no		cas3,csa3,WYL,DEDDh,cas4,DinG	Orphan	CGGTCGTCCCCGCGCCGGTCGTC	23	1	4	4656703-4656724|4656703-4656724|4656703-4656724|4656703-4656724	NZ_CP012181.1_4656733-4656754|NZ_CP012181.1_4656748-4656769|NZ_CP012181.1_4112076-4112097|NZ_CP012181.1_2245868-2245847	NA	2	2	Orphan	cas3,csa3,WYL,DEDDh,cas4,DinG	NA|69aa|up_1|NZ_CP012181.1_4654010_4654217_-,NA	NA|330aa|up_9|NZ_CP012181.1_4644343_4645333_+	pfam08044, DUF1707, Domain of unknown function (DUF1707)	NA|191aa|up_8|NZ_CP012181.1_4645348_4645921_-	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate	NA|592aa|up_7|NZ_CP012181.1_4646310_4648086_-	PRK05380, pyrG, CTP synthetase; Validated	NA|306aa|up_6|NZ_CP012181.1_4648110_4649028_-	pfam11382, MctB, Copper transport outer membrane protein, MctB	NA|392aa|up_5|NZ_CP012181.1_4649024_4650200_-	COG4825, COG4825, Uncharacterized membrane-anchored protein conserved in bacteria [Function unknown]	NA|615aa|up_4|NZ_CP012181.1_4650330_4652175_-	COG0497, RecN, ATPase involved in DNA repair [DNA replication, recombination, and repair]	NA|304aa|up_3|NZ_CP012181.1_4652275_4653187_-	PRK03372, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional	NA|275aa|up_2|NZ_CP012181.1_4653183_4654008_-	COG1189, COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis]	NA|69aa|up_1|NZ_CP012181.1_4654010_4654217_-	NA	NA|340aa|up_0|NZ_CP012181.1_4654483_4655503_-	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|552aa|down_0|NZ_CP012181.1_4657074_4658730_+	PRK10811, rne, ribonuclease E; Reviewed	NA|424aa|down_1|NZ_CP012181.1_4664355_4665627_-	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|225aa|down_2|NZ_CP012181.1_4665635_4666310_-	pfam02245, Pur_DNA_glyco, Methylpurine-DNA glycosylase (MPG)	NA|408aa|down_3|NZ_CP012181.1_4666382_4667606_-	pfam12897, Aminotran_MocR, Alanine-glyoxylate amino-transferase	NA|470aa|down_4|NZ_CP012181.1_4667602_4669012_-	PRK00855, PRK00855, argininosuccinate lyase; Provisional	NA|307aa|down_5|NZ_CP012181.1_4669643_4670564_-	PRK00779, PRK00779, ornithine carbamoyltransferase; Provisional	NA|398aa|down_6|NZ_CP012181.1_4670563_4671757_-	PRK03244, argD, acetylornithine transaminase	NA|309aa|down_7|NZ_CP012181.1_4671753_4672680_-	PRK00942, PRK00942, acetylglutamate kinase; Provisional	NA|391aa|down_8|NZ_CP012181.1_4672711_4673884_-	PRK05388, argJ, bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA|345aa|down_9|NZ_CP012181.1_4673880_4674915_-	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated
GCF_001420975.1_ASM142097v1	NZ_CP012181	Pseudonocardia sp. EC080610-09 chromosome, complete genome	7	4657736-4657887	7	CRISPRCasFinder	no		cas3,csa3,WYL,DEDDh,cas4,DinG	Orphan	CGGTCGTCCCCGCGCCGGTCGTC	23	0	0	NA	NA	NA	3	3	Orphan	cas3,csa3,WYL,DEDDh,cas4,DinG	NA|69aa|up_2|NZ_CP012181.1_4654010_4654217_-,NA	NA|191aa|up_9|NZ_CP012181.1_4645348_4645921_-	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate	NA|592aa|up_8|NZ_CP012181.1_4646310_4648086_-	PRK05380, pyrG, CTP synthetase; Validated	NA|306aa|up_7|NZ_CP012181.1_4648110_4649028_-	pfam11382, MctB, Copper transport outer membrane protein, MctB	NA|392aa|up_6|NZ_CP012181.1_4649024_4650200_-	COG4825, COG4825, Uncharacterized membrane-anchored protein conserved in bacteria [Function unknown]	NA|615aa|up_5|NZ_CP012181.1_4650330_4652175_-	COG0497, RecN, ATPase involved in DNA repair [DNA replication, recombination, and repair]	NA|304aa|up_4|NZ_CP012181.1_4652275_4653187_-	PRK03372, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional	NA|275aa|up_3|NZ_CP012181.1_4653183_4654008_-	COG1189, COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis]	NA|69aa|up_2|NZ_CP012181.1_4654010_4654217_-	NA	NA|340aa|up_1|NZ_CP012181.1_4654483_4655503_-	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|470aa|up_0|NZ_CP012181.1_4655499_4656909_-	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|424aa|down_0|NZ_CP012181.1_4664355_4665627_-	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|225aa|down_1|NZ_CP012181.1_4665635_4666310_-	pfam02245, Pur_DNA_glyco, Methylpurine-DNA glycosylase (MPG)	NA|408aa|down_2|NZ_CP012181.1_4666382_4667606_-	pfam12897, Aminotran_MocR, Alanine-glyoxylate amino-transferase	NA|470aa|down_3|NZ_CP012181.1_4667602_4669012_-	PRK00855, PRK00855, argininosuccinate lyase; Provisional	NA|307aa|down_4|NZ_CP012181.1_4669643_4670564_-	PRK00779, PRK00779, ornithine carbamoyltransferase; Provisional	NA|398aa|down_5|NZ_CP012181.1_4670563_4671757_-	PRK03244, argD, acetylornithine transaminase	NA|309aa|down_6|NZ_CP012181.1_4671753_4672680_-	PRK00942, PRK00942, acetylglutamate kinase; Provisional	NA|391aa|down_7|NZ_CP012181.1_4672711_4673884_-	PRK05388, argJ, bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA|345aa|down_8|NZ_CP012181.1_4673880_4674915_-	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated	NA|271aa|down_9|NZ_CP012181.1_4675017_4675830_+	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit
GCF_001420975.1_ASM142097v1	NZ_CP012181	Pseudonocardia sp. EC080610-09 chromosome, complete genome	8	5943931-5944035	8	CRISPRCasFinder	no		cas3,csa3,WYL,DEDDh,cas4,DinG	Orphan	GCTCACCCGATCGCACGAGCGGGGCC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,WYL,DEDDh,cas4,DinG	NA|104aa|up_8|NZ_CP012181.1_5934065_5934377_+,NA	NA|148aa|up_9|NZ_CP012181.1_5933385_5933829_+	pfam07366, SnoaL, SnoaL-like polyketide cyclase	NA|104aa|up_8|NZ_CP012181.1_5934065_5934377_+	NA	NA|303aa|up_7|NZ_CP012181.1_5934513_5935422_+	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|232aa|up_6|NZ_CP012181.1_5935403_5936099_-	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]	NA|547aa|up_5|NZ_CP012181.1_5936095_5937736_-	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms]	NA|336aa|up_4|NZ_CP012181.1_5937803_5938811_+	cd07012, PBP2_Bug_TTT, Bug (Bordetella uptake gene) protein family of periplasmic solute-binding receptors; contains the type 2 periplasmic binding fold	NA|466aa|up_3|NZ_CP012181.1_5938979_5940377_+	pfam02447, GntP_permease, GntP family permease	NA|114aa|up_2|NZ_CP012181.1_5940386_5940728_+	TIGR00277, Ribonuclease_Y, HDIG domain	NA|390aa|up_1|NZ_CP012181.1_5940989_5942159_+	TIGR04021, LLM_DMSO2_sfnG, dimethyl sulfone monooxygenase SfnG	NA|416aa|up_0|NZ_CP012181.1_5942593_5943841_+	cd01163, DszC, Dibenzothiophene (DBT) desulfurization enzyme C	NA|274aa|down_0|NZ_CP012181.1_5944206_5945028_-	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs	NA|437aa|down_1|NZ_CP012181.1_5945119_5946430_-	COG2119, COG2119, Predicted membrane protein [Function unknown]	NA|389aa|down_2|NZ_CP012181.1_5946750_5947917_+	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine	NA|500aa|down_3|NZ_CP012181.1_5948786_5950286_+	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|461aa|down_4|NZ_CP012181.1_5950484_5951867_+	cd17359, MFS_XylE_like, D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily	NA|209aa|down_5|NZ_CP012181.1_5951876_5952503_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|267aa|down_6|NZ_CP012181.1_5952556_5953357_-	cd16283, RomA-like_MBL-fold, Enterobacter cloacae RomA and related proteins; MBL-fold metallo hydrolase domain	NA|137aa|down_7|NZ_CP012181.1_5953392_5953803_-	TIGR03618, Rv1155_F420, PPOX class probable F420-dependent enzyme	NA|388aa|down_8|NZ_CP012181.1_5955073_5956237_+	cd06109, BsCS-I_like, Bacillus subtilis (Bs) citrate synthase CS-I_like	NA|484aa|down_9|NZ_CP012181.1_5956354_5957806_+	cd17504, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) transporters of the Major Facilitator Superfamily
GCF_001420975.1_ASM142097v1	NZ_CP012181	Pseudonocardia sp. EC080610-09 chromosome, complete genome	9	6111623-6111781	1	PILER-CR	no		cas3,csa3,WYL,DEDDh,cas4,DinG	Orphan	GGCCTTCTTCTCGGCCTTGGC	21	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,WYL,DEDDh,cas4,DinG	NA,NA|48aa|down_2|NZ_CP012181.1_6113876_6114020_-,NA|139aa|down_7|NZ_CP012181.1_6118173_6118590_+	NA|226aa|up_9|NZ_CP012181.1_6102928_6103606_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|389aa|up_8|NZ_CP012181.1_6103589_6104756_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|268aa|up_7|NZ_CP012181.1_6104791_6105595_-	cd18104, SpoU-like_RNA-MTase, SAM-dependent RNA methylase related to SpoU-TrmH	NA|392aa|up_6|NZ_CP012181.1_6105648_6106824_-	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|272aa|up_5|NZ_CP012181.1_6106899_6107715_+	PRK06142, PRK06142, crotonase/enoyl-CoA hydratase family protein	NA|270aa|up_4|NZ_CP012181.1_6107872_6108682_-	pfam04672, Methyltransf_19, S-adenosyl methyltransferase	NA|284aa|up_3|NZ_CP012181.1_6108686_6109538_-	PRK13639, cbiO, cobalt transporter ATP-binding subunit; Provisional	NA|244aa|up_2|NZ_CP012181.1_6109534_6110266_-	TIGR02454, Uncharacterized_protein_MJ1089, cobalt ECF transporter T component CbiQ	NA|101aa|up_1|NZ_CP012181.1_6110265_6110568_-	PRK02898, PRK02898, energy-coupling factor ABC transporter substrate-binding protein	NA|236aa|up_0|NZ_CP012181.1_6110564_6111272_-	PRK08319, PRK08319, energy-coupling factor ABC transporter permease	NA|278aa|down_0|NZ_CP012181.1_6112414_6113248_-	TIGR02980, SigBFG, RNA polymerase sigma-70 factor, sigma-B/F/G subfamily	NA|139aa|down_1|NZ_CP012181.1_6113429_6113846_+	pfam13581, HATPase_c_2, Histidine kinase-like ATPase domain	NA|48aa|down_2|NZ_CP012181.1_6113876_6114020_-	NA	NA|295aa|down_3|NZ_CP012181.1_6114261_6115146_+	COG3777, COG3777, Uncharacterized conserved protein [Function unknown]	NA|387aa|down_4|NZ_CP012181.1_6115192_6116353_+	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|283aa|down_5|NZ_CP012181.1_6116349_6117198_+	COG2301, CitE, Citrate lyase beta subunit [Carbohydrate transport and metabolism]	NA|284aa|down_6|NZ_CP012181.1_6117307_6118159_+	cd08434, PBP2_GltC_like, The substrate binding domain of LysR-type transcriptional regulator GltC, which activates gltA expression of glutamate synthase operon, contains type 2 periplasmic binding fold	NA|139aa|down_7|NZ_CP012181.1_6118173_6118590_+	NA	NA|384aa|down_8|NZ_CP012181.1_6118532_6119684_-	cd01160, LCAD, Long chain acyl-CoA dehydrogenase	NA|254aa|down_9|NZ_CP012181.1_6119712_6120474_-	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs
