assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001420855.1_ASM142085v1	NZ_CP013056	Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-1, complete sequence	1	16703-17071	1,1	CRISPRCasFinder,CRT	no	RT,cas7,cas8c,cas5,cas3	RT,cas7,cas8c,cas5,cas3,csa3,cas14j	Type I-C,Type I-U, Type I-U?	ATTATATTTCAATCCACGCACCTA,ATTTCAATCCACGCACCTANANNAGGTGCGACNT	24,34	0	0	NA	NA	NA:NA	5,5	5	TypeI-C,TypeI-U,TypeI-U?	cas3,RT,c2c9_V-U4,DEDDh,cas14j,csa3,WYL,cas14k,DinG,cas7,cas8c,cas5	NA|205aa|up_9|NZ_CP013056.1_3390_4005_+,NA|212aa|up_8|NZ_CP013056.1_4055_4691_-,NA|210aa|up_7|NZ_CP013056.1_4690_5320_-,NA|238aa|up_6|NZ_CP013056.1_5656_6370_-,NA|76aa|up_3|NZ_CP013056.1_12658_12886_-,NA|46aa|up_1|NZ_CP013056.1_14097_14235_-,NA|142aa|up_0|NZ_CP013056.1_14256_14682_-,NA|306aa|down_5|NZ_CP013056.1_27264_28182_-,NA|131aa|down_7|NZ_CP013056.1_29071_29464_-,NA|270aa|down_8|NZ_CP013056.1_31261_32071_+,NA|575aa|down_9|NZ_CP013056.1_32452_34177_-	NA|205aa|up_9|NZ_CP013056.1_3390_4005_+	NA	NA|212aa|up_8|NZ_CP013056.1_4055_4691_-	NA	NA|210aa|up_7|NZ_CP013056.1_4690_5320_-	NA	NA|238aa|up_6|NZ_CP013056.1_5656_6370_-	NA	NA|801aa|up_5|NZ_CP013056.1_6386_8789_-	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair]	RT|622aa|up_4|NZ_CP013056.1_9066_10932_-	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|76aa|up_3|NZ_CP013056.1_12658_12886_-	NA	NA|364aa|up_2|NZ_CP013056.1_12901_13993_-	TIGR02987, m6_adenine_and_m5_cytosine_DNA_methyltransferase, type II restriction m6 adenine DNA methyltransferase, Alw26I/Eco31I/Esp3I family	NA|46aa|up_1|NZ_CP013056.1_14097_14235_-	NA	NA|142aa|up_0|NZ_CP013056.1_14256_14682_-	NA	cas7|287aa|down_0|NZ_CP013056.1_17881_18742_-	COG3649, COG3649, CRISPR system related protein [Defense mechanisms]	cas8c|640aa|down_1|NZ_CP013056.1_18744_20664_-	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas5|240aa|down_2|NZ_CP013056.1_20664_21384_-	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG	cas3|790aa|down_3|NZ_CP013056.1_21589_23959_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|601aa|down_4|NZ_CP013056.1_25052_26855_-	sd00006, TPR, Tetratricopeptide repeat	NA|306aa|down_5|NZ_CP013056.1_27264_28182_-	NA	NA|261aa|down_6|NZ_CP013056.1_28196_28979_-	pfam06114, Peptidase_M78, IrrE N-terminal-like domain	NA|131aa|down_7|NZ_CP013056.1_29071_29464_-	NA	NA|270aa|down_8|NZ_CP013056.1_31261_32071_+	NA	NA|575aa|down_9|NZ_CP013056.1_32452_34177_-	NA
GCF_001420855.1_ASM142085v1	NZ_CP013056	Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-1, complete sequence	2	24043-24729	2,2,1	CRISPRCasFinder,CRT,PILER-CR	no	RT,cas7,cas8c,cas5,cas3	RT,cas7,cas8c,cas5,cas3,csa3,cas14j	Type I-C,Type I-U, Type I-U?	ATTTCAATCCACGCACCTATATGAGGTGCGAC,ATTTCAATCCACGCACCTATATNAGGTGCGAC,ATTTCAATCCACGCACCTATATGAGGTGCGAC	32,32,32	1	1	24467-24498	NZ_CP013060.1_9663-9632	I-C:I-C:I-C	10,10,3	10	TypeI-C,TypeI-U,TypeI-U?	cas3,RT,c2c9_V-U4,DEDDh,cas14j,csa3,WYL,cas14k,DinG,cas7,cas8c,cas5	NA|76aa|up_7|NZ_CP013056.1_12658_12886_-,NA|46aa|up_5|NZ_CP013056.1_14097_14235_-,NA|142aa|up_4|NZ_CP013056.1_14256_14682_-,NA|306aa|down_1|NZ_CP013056.1_27264_28182_-,NA|131aa|down_3|NZ_CP013056.1_29071_29464_-,NA|270aa|down_4|NZ_CP013056.1_31261_32071_+,NA|575aa|down_5|NZ_CP013056.1_32452_34177_-,NA|490aa|down_6|NZ_CP013056.1_34212_35682_-,NA|570aa|down_7|NZ_CP013056.1_36368_38078_+,NA|48aa|down_8|NZ_CP013056.1_39020_39164_+	NA|801aa|up_9|NZ_CP013056.1_6386_8789_-	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair]	RT|622aa|up_8|NZ_CP013056.1_9066_10932_-	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|76aa|up_7|NZ_CP013056.1_12658_12886_-	NA	NA|364aa|up_6|NZ_CP013056.1_12901_13993_-	TIGR02987, m6_adenine_and_m5_cytosine_DNA_methyltransferase, type II restriction m6 adenine DNA methyltransferase, Alw26I/Eco31I/Esp3I family	NA|46aa|up_5|NZ_CP013056.1_14097_14235_-	NA	NA|142aa|up_4|NZ_CP013056.1_14256_14682_-	NA	cas7|287aa|up_3|NZ_CP013056.1_17881_18742_-	COG3649, COG3649, CRISPR system related protein [Defense mechanisms]	cas8c|640aa|up_2|NZ_CP013056.1_18744_20664_-	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas5|240aa|up_1|NZ_CP013056.1_20664_21384_-	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG	cas3|790aa|up_0|NZ_CP013056.1_21589_23959_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|601aa|down_0|NZ_CP013056.1_25052_26855_-	sd00006, TPR, Tetratricopeptide repeat	NA|306aa|down_1|NZ_CP013056.1_27264_28182_-	NA	NA|261aa|down_2|NZ_CP013056.1_28196_28979_-	pfam06114, Peptidase_M78, IrrE N-terminal-like domain	NA|131aa|down_3|NZ_CP013056.1_29071_29464_-	NA	NA|270aa|down_4|NZ_CP013056.1_31261_32071_+	NA	NA|575aa|down_5|NZ_CP013056.1_32452_34177_-	NA	NA|490aa|down_6|NZ_CP013056.1_34212_35682_-	NA	NA|570aa|down_7|NZ_CP013056.1_36368_38078_+	NA	NA|48aa|down_8|NZ_CP013056.1_39020_39164_+	NA	NA|316aa|down_9|NZ_CP013056.1_39304_40252_+	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain
GCF_001420855.1_ASM142085v1	NZ_CP013055	Bacillus thuringiensis strain YWC2-8 chromosome, complete genome	1	603485-603635	1	CRISPRCasFinder	no		cas3,RT,c2c9_V-U4,DEDDh,cas14j,csa3,WYL,cas14k,DinG	Orphan	CGCCGATATATTTTGAAAATCGCTGATATAA	31	1	2	603516-603544|603516-603544	NZ_CP013055.1_603636-603664|NZ_CP013055.1_1181108-1181080	NA	2	2	Orphan	cas3,RT,c2c9_V-U4,DEDDh,cas14j,csa3,WYL,cas14k,DinG,cas7,cas8c,cas5	NA,NA	NA|101aa|up_9|NZ_CP013055.1_595101_595404_+	cd05564, PTS_IIB_chitobiose_lichenan, PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|434aa|up_8|NZ_CP013055.1_595418_596720_+	TIGR00359, NN'-diacetylchitobiose_permease_IIC_component, phosphotransferase system, cellobiose specific, IIC component	NA|106aa|up_7|NZ_CP013055.1_596729_597047_+	pfam02255, PTS_IIA, PTS system, Lactose/Cellobiose specific IIA subunit	NA|101aa|up_6|NZ_CP013055.1_597393_597696_+	cd05564, PTS_IIB_chitobiose_lichenan, PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|436aa|up_5|NZ_CP013055.1_597712_599020_+	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism]	NA|108aa|up_4|NZ_CP013055.1_599201_599525_+	cd00215, PTS_IIA_lac, PTS_IIA, PTS system, lactose/cellobiose specific IIA subunit	NA|442aa|up_3|NZ_CP013055.1_599528_600854_+	cd05296, GH4_P_beta_glucosidase, Glycoside Hydrolases Family 4; Phospho-beta-glucosidase	NA|235aa|up_2|NZ_CP013055.1_600903_601608_+	PRK02134, PRK02134, chitin disaccharide deacetylase	NA|394aa|up_1|NZ_CP013055.1_601646_602828_-	TIGR00937, Chromate_transport_protein, chromate transporter, chromate ion transporter (CHR) family	NA|138aa|up_0|NZ_CP013055.1_603015_603429_+	smart00754, CHRD, A domain in the BMP inhibitor chordin and in microbial proteins	NA|892aa|down_0|NZ_CP013055.1_603712_606388_-	COG3933, COG3933, Transcriptional antiterminator [Transcription]	NA|246aa|down_1|NZ_CP013055.1_606492_607230_-	cd10944, CE4_SmPgdA_like, Catalytic NodB homology domain of Streptococcus mutans polysaccharide deacetylase PgdA, Bacillus subtilis YheN, and similar proteins	NA|358aa|down_2|NZ_CP013055.1_607429_608503_-	cd06853, GT_WecA_like, This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins	NA|442aa|down_3|NZ_CP013055.1_609035_610361_+	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]	NA|372aa|down_4|NZ_CP013055.1_610435_611551_+	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]	NA|375aa|down_5|NZ_CP013055.1_611588_612713_-	COG1316, LytR, Transcriptional regulator [Transcription]	NA|212aa|down_6|NZ_CP013055.1_612795_613431_-	TIGR00257, IMPACT_family_member_HI_0722, uncharacterized protein, YigZ family	NA|281aa|down_7|NZ_CP013055.1_613667_614510_+	TIGR00762, DegV, EDD domain protein, DegV family	NA|105aa|down_8|NZ_CP013055.1_614682_614997_+	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|471aa|down_9|NZ_CP013055.1_615145_616558_+	pfam00877, NLPC_P60, NlpC/P60 family
