assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001412635.1_ASM141263v1	NZ_CP012805	Streptococcus anginosus strain J4211 chromosome, complete genome	1	384763-385669	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas1,cas2,cas3	cas3,cas1,cas2,csa3,DinG,cas9,csn2,WYL,csm6,DEDDh	Unclear	GTTAATAACCCATATTACCTCGAGAGGGGACGGAAAC,GTTAGTAACCCATATTACCTCGAGAGGGGACGGAAAC,GTTANTAACCCATNTTACCTCGAGAGGGGACGGAAAC	37,37,37	1	1	385165-385199	NZ_CP012805.1_172327-172361	II-B,III-A:II-B,III-A:II-B,III-A	11,12,12	12	Unclear	cas3,cas1,cas2,csa3,DinG,cas9,csn2,WYL,csm6,DEDDh	NA|72aa|up_6|NZ_CP012805.1_377107_377323_+,NA	NA|366aa|up_9|NZ_CP012805.1_374298_375396_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|200aa|up_8|NZ_CP012805.1_375392_375992_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|296aa|up_7|NZ_CP012805.1_376110_376998_+	cd03407, SPFH_like_u4, Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|72aa|up_6|NZ_CP012805.1_377107_377323_+	NA	NA|247aa|up_5|NZ_CP012805.1_377838_378579_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|522aa|up_4|NZ_CP012805.1_378575_380141_-	cd13627, PBP2_AA_binding_like_2, Substrate-binding domain of putative amino acid-binding protein; the type 2 periplasmic-binding protein fold	NA|630aa|up_3|NZ_CP012805.1_380267_382157_+	pfam09972, DUF2207, Predicted membrane protein (DUF2207)	NA|281aa|up_2|NZ_CP012805.1_382223_383066_+	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase	cas1|335aa|up_1|NZ_CP012805.1_383320_384325_+	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1	cas2|110aa|up_0|NZ_CP012805.1_384327_384657_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|251aa|down_0|NZ_CP012805.1_385839_386592_+	PRK02315, PRK02315, adaptor protein MecA	NA|389aa|down_1|NZ_CP012805.1_386582_387749_+	cd06853, GT_WecA_like, This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins	NA|257aa|down_2|NZ_CP012805.1_387841_388612_+	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|421aa|down_3|NZ_CP012805.1_388651_389914_+	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|411aa|down_4|NZ_CP012805.1_389929_391162_+	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily	NA|152aa|down_5|NZ_CP012805.1_391148_391604_+	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family	NA|414aa|down_6|NZ_CP012805.1_392060_393302_-	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]	cas3|448aa|down_7|NZ_CP012805.1_393459_394803_+	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|270aa|down_8|NZ_CP012805.1_394962_395772_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|248aa|down_9|NZ_CP012805.1_395771_396515_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
GCF_001412635.1_ASM141263v1	NZ_CP012805	Streptococcus anginosus strain J4211 chromosome, complete genome	2	910140-911363	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2,csn2	cas3,cas1,cas2,csa3,DinG,cas9,csn2,WYL,csm6,DEDDh	Type II-A,Type II-C,Type II-B	GTTTTTGTACTCTCAAGATTTAAGTAACTGTAAAAC,GTTTTTGTACTCTCAAGATTTAAGTAACTGTAAAAC,GTTTTTGTACTCTCAAGATTTAAGTAACTGTAAAAC	36,36,36	1	1	910440-910469	NZ_CP012805.1_1667378-1667407	NA:NA:NA	17,18,18	18	TypeII-A,TypeII-C,TypeII-B	cas3,cas1,cas2,csa3,DinG,cas9,csn2,WYL,csm6,DEDDh	NA,NA	NA|288aa|up_9|NZ_CP012805.1_896769_897633_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|211aa|up_8|NZ_CP012805.1_897688_898321_+	COG3142, CutC, Uncharacterized protein involved in copper resistance [Inorganic ion transport and metabolism]	NA|224aa|up_7|NZ_CP012805.1_898333_899005_+	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown]	NA|580aa|up_6|NZ_CP012805.1_899100_900840_+	PRK10789, PRK10789, SmdA family multidrug ABC transporter permease/ATP-binding protein	NA|581aa|up_5|NZ_CP012805.1_900842_902585_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|429aa|up_4|NZ_CP012805.1_902768_904055_-	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	cas9|1127aa|up_3|NZ_CP012805.1_904251_907632_+	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1	cas1|304aa|up_2|NZ_CP012805.1_907792_908704_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|108aa|up_1|NZ_CP012805.1_908703_909027_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|348aa|up_0|NZ_CP012805.1_909023_910067_+	cd12217, Stu0660_Csn2, Stu0660-like CRISPR/Cas system-associated protein Csn2	NA|772aa|down_0|NZ_CP012805.1_911502_913818_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|113aa|down_1|NZ_CP012805.1_914068_914407_+	PRK09263, PRK09263, anaerobic ribonucleoside triphosphate reductase; Provisional	NA|59aa|down_2|NZ_CP012805.1_914603_914780_+	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed	NA|127aa|down_3|NZ_CP012805.1_914892_915273_-	COG1970, MscL, Large-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]	NA|600aa|down_4|NZ_CP012805.1_915403_917203_+	PRK05667, dnaG, DNA primase; Validated	NA|371aa|down_5|NZ_CP012805.1_917205_918318_+	PRK09210, PRK09210, RNA polymerase sigma factor RpoD; Validated	NA|110aa|down_6|NZ_CP012805.1_918336_918666_+	COG2151, PaaD, Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only]	NA|443aa|down_7|NZ_CP012805.1_918813_920142_+	pfam05525, Branch_AA_trans, Branched-chain amino acid transport protein	NA|237aa|down_8|NZ_CP012805.1_920279_920990_+	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones]	NA|188aa|down_9|NZ_CP012805.1_921003_921567_+	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB
GCF_001412635.1_ASM141263v1	NZ_CP012805	Streptococcus anginosus strain J4211 chromosome, complete genome	3	1299342-1299577	3,3,3	PILER-CR,CRISPRCasFinder,CRT	no		cas3,cas1,cas2,csa3,DinG,cas9,csn2,WYL,csm6,DEDDh	Orphan	GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACCT,GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACCT,GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACCT	38,38,38	0	0	NA	NA	II-A:II-A:II-A	2,3,3	3	Orphan	cas3,cas1,cas2,csa3,DinG,cas9,csn2,WYL,csm6,DEDDh	NA,NA	NA|321aa|up_9|NZ_CP012805.1_1287511_1288474_-	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]	NA|248aa|up_8|NZ_CP012805.1_1288492_1289236_-	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|259aa|up_7|NZ_CP012805.1_1289368_1290145_+	TIGR02494, PFLE_PFLC, glycyl-radical enzyme activating protein	NA|150aa|up_6|NZ_CP012805.1_1290177_1290627_-	COG1959, COG1959, Predicted transcriptional regulator [Transcription]	NA|281aa|up_5|NZ_CP012805.1_1290685_1291528_-	pfam12850, Metallophos_2, Calcineurin-like phosphoesterase superfamily domain	NA|1122aa|up_4|NZ_CP012805.1_1291618_1294984_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|234aa|up_3|NZ_CP012805.1_1294998_1295700_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|184aa|up_2|NZ_CP012805.1_1295833_1296385_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|651aa|up_1|NZ_CP012805.1_1296461_1298414_-	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed	NA|214aa|up_0|NZ_CP012805.1_1298406_1299048_-	cd01428, ADK, Adenylate kinase (ADK) catalyzes the reversible phosphoryl transfer from adenosine triphosphates (ATP) to adenosine monophosphates (AMP) and to yield adenosine diphosphates (ADP)	NA|462aa|down_0|NZ_CP012805.1_1299686_1301072_-	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|148aa|down_1|NZ_CP012805.1_1301205_1301649_-	PRK07308, PRK07308, flavodoxin; Validated	NA|313aa|down_2|NZ_CP012805.1_1301801_1302740_+	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only]	NA|96aa|down_3|NZ_CP012805.1_1302801_1303089_+	PRK01678, rpmE2, type B 50S ribosomal protein L31	NA|97aa|down_4|NZ_CP012805.1_1303218_1303509_-	cd02230, cupin_HP0902-like, Helicobacter pylori HP0902 and related proteins, cupin domain	NA|233aa|down_5|NZ_CP012805.1_1303534_1304233_-	cd14852, LD-carboxypeptidase, L,D-carboxypeptidase DacB and LdcB, and related proteins	NA|318aa|down_6|NZ_CP012805.1_1304338_1305292_-	cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)	NA|240aa|down_7|NZ_CP012805.1_1305314_1306034_-	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]	NA|511aa|down_8|NZ_CP012805.1_1306030_1307563_-	cd13612, PBP2_ProWX, Substrate-binding protein ProWX of ABC-type osmoregulated transporter and its related proteins; the type 2 periplasmic-binding protein fold	NA|151aa|down_9|NZ_CP012805.1_1307559_1308012_-	TIGR04472, reg_rSAM_mob, mobile rSAM pair MarR family regulator
