assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001411805.1_ASM141180v1	NZ_CP007212	Burkholderia plantarii strain ATCC 43733 chromosome 1, complete sequence	1	2054630-2055378	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas3-cas2,cas8f,cas5f,cas7f,cas6f	WYL,cas3,DEDDh,csa3,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DinG	Type I-F	GTTTGCTGCCGGATAGGCAGCTTAGAAA,GTTTGCTGCCGGATAGGCAGCTTAGAAA,GTTTGCTGCCGGATAGGCAGCTTAGAAA	28,28,28	1	1	2055018-2055049	NZ_CP007214.1_106212-106181	I-F:I-F:I-F	12,12,10	12	TypeI-F	WYL,cas3,DEDDh,csa3,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DinG	NA|65aa|up_9|NZ_CP007212.1_2045906_2046101_+,NA|74aa|up_7|NZ_CP007212.1_2048558_2048780_+,NA|184aa|up_5|NZ_CP007212.1_2049541_2050093_+,NA|143aa|up_2|NZ_CP007212.1_2052827_2053256_+,NA|223aa|up_1|NZ_CP007212.1_2053252_2053921_+,NA|167aa|up_0|NZ_CP007212.1_2053892_2054393_-,NA	NA|65aa|up_9|NZ_CP007212.1_2045906_2046101_+	NA	NA|711aa|up_8|NZ_CP007212.1_2046131_2048264_+	TIGR03396, PC_PLC, phospholipase C, phosphocholine-specific, Pseudomonas-type	NA|74aa|up_7|NZ_CP007212.1_2048558_2048780_+	NA	NA|143aa|up_6|NZ_CP007212.1_2048934_2049363_-	cd04622, CBS_pair_HRP1_like, CBS pair domain found in Hypoxic Response Protein 1 (HRP1) -like proteinds	NA|184aa|up_5|NZ_CP007212.1_2049541_2050093_+	NA	NA|183aa|up_4|NZ_CP007212.1_2050455_2051004_+	pfam11448, DUF3005, Protein of unknown function (DUF3005)	NA|408aa|up_3|NZ_CP007212.1_2051306_2052530_+	pfam04143, Sulf_transp, Sulphur transport	NA|143aa|up_2|NZ_CP007212.1_2052827_2053256_+	NA	NA|223aa|up_1|NZ_CP007212.1_2053252_2053921_+	NA	NA|167aa|up_0|NZ_CP007212.1_2053892_2054393_-	NA	NA|262aa|down_0|NZ_CP007212.1_2055601_2056387_+	cd01170, THZ_kinase, 4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz	cas3-cas2|1173aa|down_1|NZ_CP007212.1_2057532_2061051_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas8f|458aa|down_2|NZ_CP007212.1_2061427_2062801_+	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas5f|350aa|down_3|NZ_CP007212.1_2062797_2063847_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|339aa|down_4|NZ_CP007212.1_2063917_2064934_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|189aa|down_5|NZ_CP007212.1_2064939_2065506_+	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	NA|141aa|down_6|NZ_CP007212.1_2067046_2067469_-	pfam13115, YtkA, YtkA-like	NA|314aa|down_7|NZ_CP007212.1_2068508_2069450_-	cd06582, TM_PBP1_LivH_like, Transmembrane subunit (TM) of Escherichia coli LivH and related proteins	NA|418aa|down_8|NZ_CP007212.1_2070215_2071469_-	pfam13458, Peripla_BP_6, Periplasmic binding protein	NA|308aa|down_9|NZ_CP007212.1_2071620_2072544_-	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional
GCF_001411805.1_ASM141180v1	NZ_CP007212	Burkholderia plantarii strain ATCC 43733 chromosome 1, complete sequence	2	2065636-2066924	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3-cas2,cas8f,cas5f,cas7f,cas6f	WYL,cas3,DEDDh,csa3,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DinG	Type I-F	GTTCGCTGCCGCGTAGGCAGCTTAGAAA,GTTCGCTGCCGCGTAGGCAGCTTAGAAA,GTTCGCTGCCGCGTAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	21,21,21	21	TypeI-F	WYL,cas3,DEDDh,csa3,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DinG	NA|143aa|up_8|NZ_CP007212.1_2052827_2053256_+,NA|223aa|up_7|NZ_CP007212.1_2053252_2053921_+,NA|167aa|up_6|NZ_CP007212.1_2053892_2054393_-,NA|62aa|down_5|NZ_CP007212.1_2074008_2074194_+,NA|55aa|down_6|NZ_CP007212.1_2074269_2074434_-,NA|141aa|down_8|NZ_CP007212.1_2076513_2076936_+,NA|478aa|down_9|NZ_CP007212.1_2077135_2078569_-	NA|408aa|up_9|NZ_CP007212.1_2051306_2052530_+	pfam04143, Sulf_transp, Sulphur transport	NA|143aa|up_8|NZ_CP007212.1_2052827_2053256_+	NA	NA|223aa|up_7|NZ_CP007212.1_2053252_2053921_+	NA	NA|167aa|up_6|NZ_CP007212.1_2053892_2054393_-	NA	NA|262aa|up_5|NZ_CP007212.1_2055601_2056387_+	cd01170, THZ_kinase, 4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz	cas3-cas2|1173aa|up_4|NZ_CP007212.1_2057532_2061051_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas8f|458aa|up_3|NZ_CP007212.1_2061427_2062801_+	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas5f|350aa|up_2|NZ_CP007212.1_2062797_2063847_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|339aa|up_1|NZ_CP007212.1_2063917_2064934_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|189aa|up_0|NZ_CP007212.1_2064939_2065506_+	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	NA|141aa|down_0|NZ_CP007212.1_2067046_2067469_-	pfam13115, YtkA, YtkA-like	NA|314aa|down_1|NZ_CP007212.1_2068508_2069450_-	cd06582, TM_PBP1_LivH_like, Transmembrane subunit (TM) of Escherichia coli LivH and related proteins	NA|418aa|down_2|NZ_CP007212.1_2070215_2071469_-	pfam13458, Peripla_BP_6, Periplasmic binding protein	NA|308aa|down_3|NZ_CP007212.1_2071620_2072544_-	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|356aa|down_4|NZ_CP007212.1_2072651_2073719_+	COG4757, COG4757, Predicted alpha/beta hydrolase [General function prediction only]	NA|62aa|down_5|NZ_CP007212.1_2074008_2074194_+	NA	NA|55aa|down_6|NZ_CP007212.1_2074269_2074434_-	NA	NA|497aa|down_7|NZ_CP007212.1_2074898_2076389_+	pfam13551, HTH_29, Winged helix-turn helix	NA|141aa|down_8|NZ_CP007212.1_2076513_2076936_+	NA	NA|478aa|down_9|NZ_CP007212.1_2077135_2078569_-	NA
GCF_001411805.1_ASM141180v1	NZ_CP007212	Burkholderia plantarii strain ATCC 43733 chromosome 1, complete sequence	3	2346924-2347075	3	CRISPRCasFinder	no		WYL,cas3,DEDDh,csa3,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DinG	Orphan	CTTTCTAAGCTGCTTACGCGGCAGCGAACTAG	32	0	0	NA	NA	I-F	2	2	Orphan	WYL,cas3,DEDDh,csa3,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DinG	NA|81aa|up_4|NZ_CP007212.1_2341975_2342218_-,NA	NA|326aa|up_9|NZ_CP007212.1_2335744_2336722_-	cd12830, MtCorA-like, Mycobacterium tuberculosis CorA-like subfamily	NA|205aa|up_8|NZ_CP007212.1_2337024_2337639_+	pfam13671, AAA_33, AAA domain	NA|425aa|up_7|NZ_CP007212.1_2337780_2339055_+	TIGR00782, di-heme_cytochrome_cp, cytochrome c oxidase, cbb3-type, subunit III	NA|142aa|up_6|NZ_CP007212.1_2339108_2339534_+	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]	NA|748aa|up_5|NZ_CP007212.1_2339530_2341774_+	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]	NA|81aa|up_4|NZ_CP007212.1_2341975_2342218_-	NA	NA|367aa|up_3|NZ_CP007212.1_2342398_2343499_-	COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]	NA|357aa|up_2|NZ_CP007212.1_2344189_2345260_-	pfam14362, DUF4407, Domain of unknown function (DUF4407)	NA|155aa|up_1|NZ_CP007212.1_2345480_2345945_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|180aa|up_0|NZ_CP007212.1_2346224_2346764_+	pfam07813, LTXXQ, LTXXQ motif family protein	NA|145aa|down_0|NZ_CP007212.1_2347291_2347726_+	pfam14083, PGDYG, PGDYG protein	NA|121aa|down_1|NZ_CP007212.1_2347790_2348153_-	pfam11226, DUF3022, Protein of unknown function (DUF3022)	NA|263aa|down_2|NZ_CP007212.1_2348172_2348961_-	pfam10086, DUF2324, Putative membrane peptidase family (DUF2324)	NA|349aa|down_3|NZ_CP007212.1_2349016_2350063_-	cd06283, PBP1_RegR_EndR_KdgR-like, ligand-binding domain of DNA transcription repressor RegR and other putative regulators such as KdgR and EndR	NA|323aa|down_4|NZ_CP007212.1_2350558_2351527_-	cd05301, GDH, D-glycerate dehydrogenase/hydroxypyruvate reductase (GDH)	NA|427aa|down_5|NZ_CP007212.1_2351532_2352813_-	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|336aa|down_6|NZ_CP007212.1_2352930_2353938_-	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP)	NA|255aa|down_7|NZ_CP007212.1_2353964_2354729_-	pfam01261, AP_endonuc_2, Xylose isomerase-like TIM barrel	NA|304aa|down_8|NZ_CP007212.1_2354976_2355888_-	cd08420, PBP2_CysL_like, C-terminal substrate binding domain of LysR-type transcriptional regulator CysL, which activates the transcription of the cysJI operon encoding sulfite reductase, contains the type 2 periplasmic binding fold	NA|361aa|down_9|NZ_CP007212.1_2355998_2357081_+	COG2855, COG2855, Predicted membrane protein [Function unknown]
GCF_001411805.1_ASM141180v1	NZ_CP007213	Burkholderia plantarii strain ATCC 43733 chromosome 2, complete sequence	1	782588-782689	1	CRISPRCasFinder	no		cas3,csa3	Orphan	GAGGTCGACAGCGACGCCACGCTGCTG	27	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,csa3,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DinG	NA|93aa|up_4|NZ_CP007213.1_777991_778270_-,NA|95aa|up_3|NZ_CP007213.1_778521_778806_-,NA|300aa|down_0|NZ_CP007213.1_793608_794508_-,NA|72aa|down_1|NZ_CP007213.1_794619_794835_-,NA|84aa|down_3|NZ_CP007213.1_796085_796337_+	NA|367aa|up_9|NZ_CP007213.1_772600_773701_-	cd03507, Delta12-FADS-like, The Delta12 Fatty Acid Desaturase (Delta12-FADS)-like CD includes the integral-membrane enzymes, delta-12 acyl-lipid desaturases, oleate 12-hydroxylases, omega3 and omega6 fatty acid desaturases, and other related proteins, found in a wide range of organisms including higher plants, green algae, diatoms, nematodes, fungi, and bacteria	NA|108aa|up_8|NZ_CP007213.1_773727_774051_-	smart00823, PKS_PP, Phosphopantetheine attachment site	NA|325aa|up_7|NZ_CP007213.1_774129_775104_-	COG1398, OLE1, Fatty-acid desaturase [Lipid metabolism]	NA|310aa|up_6|NZ_CP007213.1_775135_776065_-	cd03505, Delta9-FADS-like, The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi	NA|611aa|up_5|NZ_CP007213.1_776081_777914_-	cd05931, FAAL, Fatty acyl-AMP ligase (FAAL)	NA|93aa|up_4|NZ_CP007213.1_777991_778270_-	NA	NA|95aa|up_3|NZ_CP007213.1_778521_778806_-	NA	NA|171aa|up_2|NZ_CP007213.1_779016_779529_-	pfam13211, DUF4019, Protein of unknown function (DUF4019)	NA|384aa|up_1|NZ_CP007213.1_779580_780732_-	pfam10933, DUF2827, Protein of unknown function (DUF2827)	NA|382aa|up_0|NZ_CP007213.1_780754_781900_-	pfam10933, DUF2827, Protein of unknown function (DUF2827)	NA|300aa|down_0|NZ_CP007213.1_793608_794508_-	NA	NA|72aa|down_1|NZ_CP007213.1_794619_794835_-	NA	NA|217aa|down_2|NZ_CP007213.1_795145_795796_-	pfam03358, FMN_red, NADPH-dependent FMN reductase	NA|84aa|down_3|NZ_CP007213.1_796085_796337_+	NA	NA|390aa|down_4|NZ_CP007213.1_796602_797772_+	COG4175, ProV, ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]	NA|298aa|down_5|NZ_CP007213.1_797764_798658_+	COG4176, ProW, ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism]	NA|336aa|down_6|NZ_CP007213.1_798763_799771_+	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]	NA|317aa|down_7|NZ_CP007213.1_799906_800857_+	TIGR03414, ABC_choline_bnd, choline ABC transporter, periplasmic binding protein	NA|230aa|down_8|NZ_CP007213.1_800909_801599_-	pfam05118, Asp_Arg_Hydrox, Aspartyl/Asparaginyl beta-hydroxylase	NA|79aa|down_9|NZ_CP007213.1_801814_802051_+	pfam11278, DUF3079, Protein of unknown function (DUF3079)
GCF_001411805.1_ASM141180v1	NZ_CP007213	Burkholderia plantarii strain ATCC 43733 chromosome 2, complete sequence	2	843959-844047	2	CRISPRCasFinder	no		cas3,csa3	Orphan	GGTGGCGCCGGGGCCGGCGGTCG	23	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,csa3,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DinG	NA|77aa|up_5|NZ_CP007213.1_833180_833411_-,NA|183aa|up_4|NZ_CP007213.1_833425_833974_+,NA|71aa|up_3|NZ_CP007213.1_834094_834307_+,NA|91aa|down_0|NZ_CP007213.1_844398_844671_+,NA|100aa|down_3|NZ_CP007213.1_845646_845946_-,NA|56aa|down_4|NZ_CP007213.1_846362_846530_-,NA|118aa|down_5|NZ_CP007213.1_846597_846951_+	NA|256aa|up_9|NZ_CP007213.1_829261_830029_+	PRK09468, ompR, osmolarity response regulator; Provisional	NA|442aa|up_8|NZ_CP007213.1_830025_831351_+	PRK09467, envZ, osmolarity sensor protein; Provisional	NA|273aa|up_7|NZ_CP007213.1_831408_832227_-	pfam06629, MipA, MltA-interacting protein MipA	NA|250aa|up_6|NZ_CP007213.1_832291_833041_-	PRK09468, ompR, osmolarity response regulator; Provisional	NA|77aa|up_5|NZ_CP007213.1_833180_833411_-	NA	NA|183aa|up_4|NZ_CP007213.1_833425_833974_+	NA	NA|71aa|up_3|NZ_CP007213.1_834094_834307_+	NA	NA|375aa|up_2|NZ_CP007213.1_834403_835528_+	PRK11556, PRK11556, MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA|1023aa|up_1|NZ_CP007213.1_835543_838612_+	PRK10503, PRK10503, MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA|1060aa|up_0|NZ_CP007213.1_838608_841788_+	PRK10614, PRK10614, multidrug efflux system subunit MdtC; Provisional	NA|91aa|down_0|NZ_CP007213.1_844398_844671_+	NA	NA|187aa|down_1|NZ_CP007213.1_844696_845257_+	pfam05818, TraT, Enterobacterial TraT complement resistance protein	NA|84aa|down_2|NZ_CP007213.1_845289_845541_+	pfam13499, EF-hand_7, EF-hand domain pair	NA|100aa|down_3|NZ_CP007213.1_845646_845946_-	NA	NA|56aa|down_4|NZ_CP007213.1_846362_846530_-	NA	NA|118aa|down_5|NZ_CP007213.1_846597_846951_+	NA	NA|395aa|down_6|NZ_CP007213.1_847137_848322_+	PRK05122, PRK05122, major facilitator superfamily transporter; Provisional	NA|260aa|down_7|NZ_CP007213.1_848338_849118_+	cd06193, siderophore_interacting, Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family	NA|211aa|down_8|NZ_CP007213.1_849279_849912_+	pfam17923, TetR_C_18, Tetracyclin repressor-like, C-terminal domain	NA|241aa|down_9|NZ_CP007213.1_850791_851514_+	PRK11534, PRK11534, DNA-binding transcriptional regulator CsiR; Provisional
