The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LN890520	Salmonella enterica subsp. enterica serovar Weltevreden strain 2511STDY5462413 chromosome 1	5129845	620985	672290	5129845	portal,protease,tRNA,holin,integrase,terminase,tail	Enterobacteria_phage(32.43%)	61	628876:628893	676313:676330
WP_000912376.1|620985_622371_+|tRNA	cysteine--tRNA ligase	tRNA	M1PG92	Moumouvirus	35.5	1.1e-44
WP_001143506.1|622461_623010_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_000190281.1|623137_623350_-	ribosome-associated protein YbcJ	NA	NA	NA	NA	NA
WP_000729165.1|623351_624218_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	36.5	4.2e-29
WP_000681033.1|624764_625319_+	type 1 fimbrial protein subunit FimA	NA	NA	NA	NA	NA
WP_000619604.1|625393_625927_+	type 1 fimbrial protein subunit FimI	NA	NA	NA	NA	NA
WP_001519112.1|625970_626663_+	type 1 fimbria chaperone FimC	NA	NA	NA	NA	NA
WP_000754203.1|626693_629306_+	fimbrial biogenesis usher protein	NA	NA	NA	NA	NA
628876:628893	attL	ACTGGCGGGGCTATGCGG	NA	NA	NA	NA
WP_000708649.1|629320_630328_+	type 1 fimbrin D-mannose specific adhesin FimH	NA	NA	NA	NA	NA
WP_000603410.1|630337_630856_+	fimbria assembly protein	NA	NA	NA	NA	NA
WP_000801273.1|630901_631534_-	fimbria biosynthesis transcriptional regulator FimZ	NA	NA	NA	NA	NA
WP_001258107.1|632137_632860_-	fimbria biosynthesis regulator FimY	NA	NA	NA	NA	NA
WP_000948629.1|633350_633947_-	fimbria biosynthesis transcriptional regulator FimW	NA	NA	NA	NA	NA
WP_000778544.1|634444_635632_+|integrase	tyrosine-type recombinase/integrase	integrase	Q7M297	Enterobacteria_phage	53.4	1.3e-121
WP_000884168.1|635972_636278_+	hypothetical protein	NA	NA	NA	NA	NA
WP_130548920.1|636274_636709_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000083329.1|636928_637126_+	AlpA family transcriptional regulator	NA	A0A1V0E8E5	Vibrio_phage	46.3	5.1e-07
WP_057515098.1|637227_637824_+	hypothetical protein	NA	A0A1X9SFL9	Acinetobacter_phage	47.7	4.6e-19
WP_057515097.1|637903_638236_-	hypothetical protein	NA	NA	NA	NA	NA
WP_057515096.1|638429_638717_+	host cell division inhibitor Icd-like protein	NA	A0A2H4JGW3	uncultured_Caudovirales_phage	47.9	3.5e-17
WP_001293161.1|638709_638871_+	hypothetical protein	NA	NA	NA	NA	NA
WP_057515095.1|638863_639262_+	hypothetical protein	NA	A0A286SGR4	Klebsiella_phage	55.9	3.1e-11
WP_165418954.1|639254_639425_+	hypothetical protein	NA	NA	NA	NA	NA
WP_057515094.1|639417_639645_+	hypothetical protein	NA	NA	NA	NA	NA
WP_057515093.1|639625_639946_+	hypothetical protein	NA	A0A0P0ZDC0	Stx2-converting_phage	71.8	6.5e-20
WP_057515092.1|639956_640751_+	ORF6N domain-containing protein	NA	F1C5A3	Cronobacter_phage	67.3	7.0e-47
WP_057515091.1|640747_641053_+	hypothetical protein	NA	NA	NA	NA	NA
WP_057515090.1|641142_641526_+	hypothetical protein	NA	NA	NA	NA	NA
WP_057515089.1|641518_642166_+	hypothetical protein	NA	A0A1B5FPB4	Escherichia_phage	42.9	3.1e-29
WP_057515088.1|642175_644317_+	DUF927 domain-containing protein	NA	A0A1W6JPG0	Morganella_phage	55.7	2.7e-194
WP_000123960.1|644313_644709_+	single-stranded DNA-binding protein	NA	NA	NA	NA	NA
WP_057515087.1|644752_645667_+	hypothetical protein	NA	F1C596	Cronobacter_phage	47.9	1.4e-59
WP_057515086.1|645760_646576_+	antitermination protein	NA	A0A1B5FPA5	Escherichia_phage	73.4	2.0e-113
WP_024143313.1|646780_647146_+	hypothetical protein	NA	R9TR46	Vibrio_phage	59.8	1.8e-18
WP_057515167.1|647423_647612_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001294873.1|647703_648093_+|holin	phage holin family protein	holin	K7PHB9	Enterobacterial_phage	72.5	4.8e-41
WP_000226306.1|648079_648361_+|holin	phage holin family protein	holin	K7PKN9	Enterobacterial_phage	80.6	3.3e-36
WP_057515252.1|648360_648978_+	glycoside hydrolase family 19 protein	NA	Q8HA86	Salmonella_phage	84.8	1.4e-98
WP_057515253.1|648974_649508_+	DUF2514 domain-containing protein	NA	A0A291LBG9	Klebsiella_phage	49.3	1.5e-08
WP_071828141.1|649667_649949_-	hypothetical protein	NA	NA	NA	NA	NA
WP_057515255.1|650368_650860_+	DUF1441 family protein	NA	Q9EYD0	Enterobacteria_phage	57.5	5.8e-44
WP_057515256.1|650846_652955_+|terminase	phage terminase large subunit family protein	terminase	Q9EYD1	Enterobacteria_phage	70.6	4.3e-293
WP_000196423.1|652951_653158_+	hypothetical protein	NA	A5LH28	Enterobacteria_phage	48.6	1.1e-07
WP_057515257.1|653154_654690_+|portal	phage portal protein	portal	K7PHM5	Enterobacterial_phage	63.4	1.6e-177
WP_057515258.1|654652_656722_+|protease	Clp protease ClpP	protease	A0A291AWT6	Escherichia_phage	72.0	2.7e-276
WP_057515259.1|656810_657134_+	DUF2190 family protein	NA	K7PLV6	Enterobacteria_phage	64.2	3.5e-29
WP_057515260.1|657126_657402_+	DNA breaking-rejoining protein	NA	NA	NA	NA	NA
WP_077945133.1|657405_657990_+|tail	phage tail protein	tail	A5LH33	Enterobacteria_phage	78.6	1.8e-76
WP_057515261.1|657986_658388_+|tail	phage tail protein	tail	A0A291AWY2	Escherichia_phage	69.9	3.6e-52
WP_000971954.1|658395_659142_+	Ig-like domain-containing protein	NA	A0A291AWU6	Escherichia_phage	76.9	1.9e-99
WP_057515262.1|659192_659588_+|tail	phage minor tail protein G	tail	A5LH36	Enterobacteria_phage	56.5	1.3e-30
WP_077945132.1|659584_659923_+|tail	phage tail assembly protein T	tail	A5LH37	Enterobacteria_phage	61.5	1.7e-31
WP_057517210.1|659894_662990_+|tail	phage tail tape measure protein	tail	A0A291AWX1	Escherichia_phage	60.6	2.6e-270
WP_000447370.1|662992_663322_+|tail	phage tail protein	tail	A5LH39	Enterobacteria_phage	71.3	7.3e-43
WP_023194668.1|663331_664030_+|tail	phage minor tail protein L	tail	A0A1B5FP81	Escherichia_phage	75.4	7.9e-103
WP_071828142.1|664036_664774_+|tail	phage tail protein	tail	K7PLW1	Enterobacteria_phage	84.2	2.2e-127
WP_023194667.1|664671_665319_+|tail	tail assembly protein	tail	A5LH42	Enterobacteria_phage	78.6	5.4e-90
WP_057517197.1|665381_668744_+	host specificity protein J	NA	K7PKJ2	Enterobacteria_phage	80.4	0.0e+00
WP_000178849.1|668782_669025_+	hypothetical protein	NA	NA	NA	NA	NA
WP_057516113.1|669078_671757_+|tail	prophage tail fiber N-terminal domain-containing protein	tail	A0A1B0VFW4	Salmonella_phage	65.7	6.4e-153
WP_057515101.1|671771_672290_+|tail	tail fiber assembly protein	tail	A0A0U2QV64	Escherichia_phage	49.7	2.3e-43
676313:676330	attR	ACTGGCGGGGCTATGCGG	NA	NA	NA	NA
>prophage 2
NZ_LN890520	Salmonella enterica subsp. enterica serovar Weltevreden strain 2511STDY5462413 chromosome 1	5129845	1039884	1049597	5129845	transposase,protease	Dickeya_phage(16.67%)	7	NA	NA
WP_001201754.1|1039884_1041003_+	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	38.9	1.4e-08
WP_000125895.1|1040999_1042946_+	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	42.3	9.1e-40
WP_000447499.1|1043075_1043297_-	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
WP_000520789.1|1043620_1043941_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	4.5e-13
WP_000934064.1|1043971_1046248_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.3	6.2e-165
WP_001117984.1|1046458_1046656_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086011253.1|1048341_1049597_-|transposase	IS3-like element ISSen1 family transposase	transposase	Q6H9S3	Enterobacteria_phage	34.5	2.2e-18
>prophage 3
NZ_LN890520	Salmonella enterica subsp. enterica serovar Weltevreden strain 2511STDY5462413 chromosome 1	5129845	1090364	1206536	5129845	portal,protease,tRNA,holin,lysis,transposase,terminase,tail	Salmonella_phage(36.07%)	112	NA	NA
WP_086011248.1|1090364_1091619_+|transposase	IS3-like element ISSen1 family transposase	transposase	Q6H9S3	Enterobacteria_phage	34.5	9.8e-19
WP_000705789.1|1091796_1094061_+	ComEC family protein	NA	Q332C0	Clostridium_botulinum_C_phage	22.5	8.8e-10
WP_000551246.1|1094097_1095846_+	lipid A ABC transporter ATP-binding protein/permease MsbA	NA	W8CYL7	Bacillus_phage	30.5	3.2e-60
WP_000561681.1|1095842_1096820_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_000056917.1|1096863_1098096_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000350061.1|1098147_1098330_+	protein YcaR	NA	NA	NA	NA	NA
WP_000011576.1|1098326_1099073_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_000436894.1|1099283_1100177_+	YcbJ family phosphotransferase	NA	NA	NA	NA	NA
WP_000899551.1|1100156_1100933_-	envelope biogenesis factor ElyC	NA	NA	NA	NA	NA
WP_001154025.1|1101068_1101872_+|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	tRNA	NA	NA	NA	NA
WP_001288828.1|1101864_1103187_+	chromosome partition protein MukF	NA	NA	NA	NA	NA
WP_000060025.1|1103167_1103872_+	chromosome partition protein MukE	NA	NA	NA	NA	NA
WP_000572741.1|1103871_1108338_+	chromosome partition protein MukB	NA	NA	NA	NA	NA
WP_000925895.1|1108682_1110530_+	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_000357052.1|1110789_1111338_+	YcbK family protein	NA	A0A0K1LKR7	Rhodobacter_phage	33.7	1.2e-05
WP_001109478.1|1111365_1112013_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_000462653.1|1112074_1113265_-	aspartate transaminase	NA	NA	NA	NA	NA
WP_000977709.1|1113449_1114541_-	porin OmpF	NA	Q1MVN1	Enterobacteria_phage	51.7	1.7e-99
WP_000117867.1|1115146_1116547_-|tRNA	asparagine--tRNA ligase	tRNA	A0A2K9V902	Bandra_megavirus	35.8	4.5e-81
WP_000762342.1|1116747_1117209_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_000544858.1|1117526_1118741_+	diaminopropionate ammonia-lyase	NA	NA	NA	NA	NA
WP_000893191.1|1118986_1120420_+	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
WP_000191409.1|1120500_1121703_-	nicotinate phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_001262307.1|1121897_1123190_-	DUF3596 domain-containing protein	NA	S4TSP2	Salmonella_phage	100.0	3.4e-253
WP_000065276.1|1123234_1123483_-	excisionase family protein	NA	S4TND0	Salmonella_phage	100.0	4.7e-42
WP_001237031.1|1123523_1123763_-	DUF4060 family protein	NA	S4TR31	Salmonella_phage	100.0	2.0e-37
WP_077905121.1|1123805_1124963_-	recombinase RecT	NA	S4TTE8	Salmonella_phage	99.7	1.0e-216
WP_001534728.1|1124925_1127853_-	PD-(D/E)XK nuclease-like domain-containing protein	NA	S4TNL0	Salmonella_phage	94.1	0.0e+00
WP_000551856.1|1127993_1128164_-	hypothetical protein	NA	K7PGY4	Enterobacteria_phage	51.0	8.8e-08
WP_010989055.1|1128156_1128417_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001038966.1|1128466_1128877_-	helix-turn-helix domain-containing protein	NA	A0A1B5FPF4	Escherichia_phage	42.4	8.1e-07
WP_000370145.1|1128996_1129236_+	helix-turn-helix domain-containing protein	NA	H6WRX5	Salmonella_phage	47.2	8.3e-12
WP_001574095.1|1129201_1129576_+	hypothetical protein	NA	S4TTD7	Salmonella_phage	99.2	3.9e-64
WP_000062941.1|1129660_1130644_+	replication protein	NA	H6WRX7	Salmonella_phage	100.0	1.9e-163
WP_000800010.1|1130646_1131396_+	ATP-binding protein	NA	S4TNF5	Salmonella_phage	99.6	3.6e-138
WP_000113629.1|1131406_1131754_+	DUF977 family protein	NA	H6WRX9	Salmonella_phage	89.6	5.4e-52
WP_000065108.1|1131750_1132062_+	ead/Ea22-like family protein	NA	A0A220NQV2	Salmonella_phage	97.2	7.2e-32
WP_014343823.1|1132139_1132430_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001217665.1|1132721_1132955_+	DinI family protein	NA	H6WRY5	Salmonella_phage	98.7	2.1e-36
WP_000807548.1|1133066_1133288_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000929805.1|1133370_1133973_+	DUF1367 family protein	NA	S4TTI0	Salmonella_phage	98.5	8.3e-109
WP_001096550.1|1134181_1134793_+	recombination protein NinG	NA	A0A0M4RU10	Salmonella_phage	99.0	1.2e-91
WP_001617856.1|1134789_1134936_+	YlcG family protein	NA	A0A0M5M7B2	Salmonella_phage	97.9	4.3e-19
WP_001047632.1|1134925_1135723_+	antitermination protein	NA	A0A0M4S661	Salmonella_phage	99.2	8.9e-151
WP_010989004.1|1135789_1136107_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001534733.1|1136280_1136406_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000798705.1|1136541_1136991_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001141973.1|1137351_1138038_-|protease	type III secretion system effector protease GtgA	protease	Q9MBM0	Phage_Gifsy-2	100.0	2.1e-132
WP_001574216.1|1138313_1138643_+|holin	phage holin, lambda family	holin	A0A0M3ULK9	Salmonella_phage	100.0	5.8e-56
WP_000984585.1|1138626_1139079_+	lysozyme	NA	A0A0M4R365	Salmonella_phage	98.0	1.4e-79
WP_001534723.1|1139096_1139576_+|lysis	lysis protein	lysis	Q56118	Enterobacteria_phage	77.7	5.0e-56
WP_000371784.1|1139783_1140317_+	DUF1441 family protein	NA	A0A291AWV8	Escherichia_phage	48.1	1.0e-33
WP_000989241.1|1140273_1142412_+|terminase	phage terminase large subunit family protein	terminase	A5LH27	Enterobacteria_phage	72.6	3.4e-290
WP_000196190.1|1142408_1142615_+	hypothetical protein	NA	A0A1W6JT66	Pseudomonas_phage	53.3	2.9e-05
WP_001009206.1|1142611_1144159_+|portal	phage portal protein	portal	A0A291AWU2	Escherichia_phage	64.3	2.8e-177
WP_077905123.1|1144082_1146164_+|protease	Clp protease ClpP	protease	A0A291AWT6	Escherichia_phage	69.2	1.6e-263
WP_086011253.1|1146272_1147527_+|transposase	IS3-like element ISSen1 family transposase	transposase	Q6H9S3	Enterobacteria_phage	34.5	2.2e-18
WP_001107907.1|1147569_1147893_+	DUF2190 family protein	NA	K7PLV6	Enterobacteria_phage	61.3	1.3e-28
WP_000774239.1|1147885_1148185_+	ATP-binding protein	NA	K7PH43	Enterobacteria_phage	45.1	4.5e-15
WP_000453192.1|1148165_1148732_+|tail	phage tail protein	tail	Q9G063	Phage_Gifsy-2	95.7	2.1e-13
WP_000196703.1|1148728_1149130_+|tail	tail protein	tail	K7PHM6	Enterobacterial_phage	60.9	2.0e-42
WP_000132756.1|1149141_1149891_+|tail	phage tail protein	tail	A0A291AWU6	Escherichia_phage	68.6	3.7e-90
WP_000478859.1|1149936_1150335_+|tail	phage minor tail protein G	tail	K7PLV8	Enterobacteria_phage	56.8	8.6e-30
WP_010989009.1|1150331_1150661_+|tail	phage tail assembly protein T	tail	A5LH37	Enterobacteria_phage	50.9	5.0e-23
WP_010989010.1|1150740_1153728_+|tail	phage tail tape measure protein	tail	A0A291AWX1	Escherichia_phage	62.1	8.2e-266
WP_000978295.1|1153724_1154057_+|tail	phage tail protein	tail	A5LH39	Enterobacteria_phage	61.5	2.6e-35
WP_000725267.1|1154155_1154653_+	Ail/Lom family outer membrane beta-barrel protein	NA	A0A1B0VBR9	Salmonella_phage	36.6	1.4e-16
WP_000877926.1|1154769_1155303_-	superoxide dismutase [Cu-Zn]	NA	Q9MC02	Salmonella_phage	54.0	1.8e-46
WP_001152416.1|1155392_1156088_+|tail	phage minor tail protein L	tail	A0A0K2FJ01	Enterobacteria_phage	66.7	1.0e-89
WP_000606354.1|1156097_1156835_+|tail	phage tail protein	tail	A0A0P0ZE89	Stx2-converting_phage	75.6	6.1e-114
WP_001576012.1|1156732_1157437_+|tail	tail assembly protein	tail	A5LH42	Enterobacteria_phage	63.1	2.4e-67
WP_077905120.1|1159983_1160859_+	DUF1983 domain-containing protein	NA	K7PKJ2	Enterobacteria_phage	79.7	1.5e-50
WP_000178826.1|1160897_1161140_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001534724.1|1161193_1163872_+|tail	prophage tail fiber N-terminal domain-containing protein	tail	A0A1B0VFW4	Salmonella_phage	64.4	3.0e-150
WP_000421115.1|1163886_1164405_+|tail	tail fiber assembly protein	tail	A0A0U2QV64	Escherichia_phage	51.4	2.5e-45
WP_001534738.1|1165516_1166485_+	SPI-2 type III secretion system effector SseI	NA	Q9MBL9	Phage_Gifsy-2	99.1	1.1e-192
WP_000334547.1|1167132_1167759_-	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	63.2	1.4e-66
WP_031603423.1|1167827_1168127_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086011251.1|1168408_1169570_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	41.9	6.2e-52
WP_000497441.1|1170050_1170242_-	DinI-like family protein	NA	S4TNM0	Salmonella_phage	95.2	6.2e-26
WP_001534725.1|1170668_1173281_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	22.8	4.8e-20
WP_000291723.1|1173488_1174499_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_001220671.1|1174664_1175207_+	cell division protein ZapC	NA	NA	NA	NA	NA
WP_000224074.1|1175203_1176313_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_001086485.1|1176411_1178520_+	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA	NA
WP_000053044.1|1178532_1180440_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	29.8	2.4e-53
WP_000333145.1|1180454_1181708_+	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA	NA
WP_000433416.1|1181712_1183353_+	intermembrane transport protein PqiB	NA	NA	NA	NA	NA
WP_000759137.1|1183349_1183913_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_001537784.1|1184168_1184336_+	ribosome modulation factor	NA	NA	NA	NA	NA
WP_000227928.1|1184435_1184954_-	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA	NA
WP_000156452.1|1185022_1186783_-|protease	Lon protease family protein	protease	NA	NA	NA	NA
WP_000877172.1|1186968_1187421_+	macrodomain Ter protein MatP	NA	NA	NA	NA	NA
WP_001670727.1|1187492_1188545_-	porin OmpA	NA	NA	NA	NA	NA
WP_000288732.1|1188901_1189411_-	cell division inhibitor SulA	NA	NA	NA	NA	NA
WP_001202375.1|1189627_1190233_+	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA	NA
WP_000950876.1|1190219_1192373_-	TIGR01666 family membrane protein	NA	NA	NA	NA	NA
WP_001261222.1|1192391_1192838_-	YccF domain-containing protein	NA	NA	NA	NA	NA
WP_000420523.1|1192961_1195016_+	DNA helicase IV	NA	A7KV33	Bacillus_phage	27.6	6.5e-20
WP_000424187.1|1195051_1195510_-	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_000847719.1|1195604_1196267_-	DUF2057 family protein	NA	NA	NA	NA	NA
WP_001537782.1|1196440_1196854_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_000561983.1|1196898_1197216_-	heat shock protein HspQ	NA	NA	NA	NA	NA
WP_000140480.1|1197273_1198485_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA	NA
WP_000859417.1|1198699_1199248_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA	NA
WP_000548082.1|1199273_1200053_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000072884.1|1200101_1200383_+	acylphosphatase	NA	NA	NA	NA	NA
WP_000904446.1|1200379_1200709_-	sulfurtransferase TusE	NA	NA	NA	NA	NA
WP_000374046.1|1200795_1201455_-|protease	FtsH protease modulator YccA	protease	A0A2H4JFM9	uncultured_Caudovirales_phage	52.4	2.7e-44
WP_086011251.1|1202551_1203713_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	41.9	6.2e-52
WP_001540404.1|1204117_1204534_+	CesT family type III secretion system chaperone	NA	NA	NA	NA	NA
WP_001517981.1|1205174_1206536_-|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	tRNA	Q6DW11	Phage_TP	95.4	2.3e-207
>prophage 4
NZ_LN890520	Salmonella enterica subsp. enterica serovar Weltevreden strain 2511STDY5462413 chromosome 1	5129845	1260930	1267227	5129845		Enterobacteria_phage(50.0%)	6	NA	NA
WP_001111837.1|1260930_1262334_+	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	26.5	3.1e-21
WP_000981469.1|1262511_1263405_+	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
WP_000697846.1|1263781_1264867_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	1.6e-102
WP_001023657.1|1264866_1265766_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.3	7.9e-31
WP_000857532.1|1265813_1266692_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	64.1	1.7e-107
WP_001100807.1|1266696_1267227_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	57.1	3.7e-52
>prophage 5
NZ_LN890520	Salmonella enterica subsp. enterica serovar Weltevreden strain 2511STDY5462413 chromosome 1	5129845	1458398	1529467	5129845	portal,head,tRNA,holin,capsid,integrase,transposase,terminase,tail	Salmonella_phage(32.08%)	83	1461419:1461434	1469715:1469730
WP_000004540.1|1458398_1459505_-|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_000476064.1|1459558_1460020_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_000825956.1|1460031_1460361_-	DUF1311 domain-containing protein	NA	NA	NA	NA	NA
WP_001249415.1|1460357_1461023_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA	NA
WP_000444507.1|1461194_1462445_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	90.7	1.1e-19
1461419:1461434	attL	ACAGGTTTACGGCCAG	NA	NA	NA	NA
WP_000741325.1|1462558_1463701_-|integrase	phage integrase Arm DNA-binding domain-containing protein	integrase	O21929	Phage_21	80.3	8.2e-174
WP_000089142.1|1463690_1463927_-	excisionase	NA	NA	NA	NA	NA
WP_000008350.1|1464070_1464610_-	hypothetical protein	NA	A0A192Y8M4	Salmonella_phage	98.9	6.5e-97
WP_000080410.1|1464746_1465574_-	DUF2303 family protein	NA	Q8HAA2	Salmonella_phage	98.9	1.1e-151
WP_000997190.1|1465631_1466003_-	hypothetical protein	NA	Q8HAA1	Salmonella_phage	100.0	1.1e-63
WP_000883481.1|1466541_1466739_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001020636.1|1467073_1467769_-	helix-turn-helix transcriptional regulator	NA	Q8HAA0	Salmonella_phage	100.0	3.2e-128
WP_001191666.1|1467866_1468091_+	helix-turn-helix transcriptional regulator	NA	A0A1C9IHV8	Salmonella_phage	100.0	1.9e-34
WP_000509731.1|1468119_1468674_+	hypothetical protein	NA	A0A1C9II13	Salmonella_phage	100.0	6.9e-102
WP_001087399.1|1468670_1469813_+	Rha family phage regulatory protein	NA	A0A1C9IHV9	Salmonella_phage	93.4	2.5e-194
1469715:1469730	attR	CTGGCCGTAAACCTGT	NA	NA	NA	NA
WP_000620702.1|1469809_1470034_+	hypothetical protein	NA	A0A1C9II64	Salmonella_phage	100.0	3.3e-39
WP_000104923.1|1470030_1470990_+	helix-turn-helix domain-containing protein	NA	U5P0A0	Shigella_phage	83.4	3.2e-123
WP_001669427.1|1470991_1471474_+	PerC family transcriptional regulator	NA	Q8HA95	Salmonella_phage	98.1	6.0e-86
WP_000066940.1|1471473_1472367_+	phage N-6-adenine-methyltransferase	NA	Q8HA94	Salmonella_phage	93.9	7.3e-162
WP_000767086.1|1472363_1472753_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A192Y8N5	Salmonella_phage	97.7	1.6e-68
WP_001061461.1|1472769_1473630_+	KilA-N domain-containing protein	NA	A0A192Y6F8	Salmonella_phage	98.3	2.3e-160
WP_024134153.1|1473637_1474627_+	DUF968 domain-containing protein	NA	A0A1C9IHZ5	Salmonella_phage	97.3	7.1e-190
WP_000595052.1|1474641_1474914_+	hypothetical protein	NA	A0A1B5FPA6	Escherichia_phage	77.6	9.4e-28
WP_001534776.1|1474910_1475747_+	antitermination protein	NA	A0A1B5FPA5	Escherichia_phage	77.4	3.5e-121
WP_000057291.1|1476049_1476745_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000658036.1|1477048_1477237_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001294875.1|1477326_1477716_+|holin	phage holin family protein	holin	K7PHB9	Enterobacterial_phage	71.8	8.1e-41
WP_000226307.1|1477702_1477984_+|holin	phage holin family protein	holin	K7PKN9	Enterobacterial_phage	80.6	2.6e-36
WP_001075992.1|1477983_1478598_+	glycoside hydrolase family 19 protein	NA	Q8HA86	Salmonella_phage	92.2	6.7e-106
WP_000636436.1|1478594_1479137_+	DUF2514 family protein	NA	NA	NA	NA	NA
WP_001252725.1|1479239_1479743_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001102153.1|1480001_1480547_+|terminase	terminase small subunit	terminase	A0A0U2S671	Escherichia_phage	80.6	1.5e-56
WP_001534812.1|1480518_1482450_+|terminase	phage terminase large subunit family protein	terminase	A0A0K2FJ14	Enterobacteria_phage	65.9	2.8e-259
WP_000201415.1|1482433_1482637_+	gpW family protein	NA	K7PM10	Enterobacteria_phage	73.8	1.9e-17
WP_000831821.1|1482633_1484214_+|portal	phage portal protein	portal	K7P6U7	Enterobacteria_phage	62.8	9.6e-189
WP_001189503.1|1484203_1485700_+	S49 family peptidase	NA	A0A0K2FI53	Enterobacteria_phage	52.2	8.1e-97
WP_000011258.1|1485712_1486060_+|head	head decoration protein	head	A0A2R9YJN3	Escherichia_phage	53.8	4.1e-20
WP_057515266.1|1486114_1487143_+|capsid	major capsid protein	capsid	C6ZCY2	Enterobacteria_phage	60.8	5.0e-114
WP_000235459.1|1487200_1487560_+	DNA-packaging protein FI	NA	NA	NA	NA	NA
WP_000083295.1|1487570_1487948_+|tail	tail attachment protein	tail	K7PHD8	Enterobacteria_phage	54.7	3.4e-28
WP_001534814.1|1487934_1488513_+|tail	phage tail protein	tail	A5LH33	Enterobacteria_phage	80.7	1.7e-82
WP_043991247.1|1488561_1489692_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	Q9G0F2	Phage_Gifsy-1	99.7	4.5e-217
WP_023184817.1|1489800_1490202_+|tail	phage tail protein	tail	Q9G0F3	Phage_Gifsy-1	98.0	1.2e-50
WP_000971954.1|1490209_1490956_+	Ig-like domain-containing protein	NA	A0A291AWU6	Escherichia_phage	76.9	1.9e-99
WP_000479607.1|1491006_1491402_+|tail	phage minor tail protein G	tail	A5LH36	Enterobacteria_phage	56.5	2.3e-30
WP_077905125.1|1491398_1491737_+|tail	phage tail assembly protein T	tail	A5LH37	Enterobacteria_phage	63.6	3.5e-32
WP_057517015.1|1491708_1494750_+|tail	phage tail tape measure protein	tail	A0A291AWX1	Escherichia_phage	64.6	2.2e-290
WP_000447370.1|1494752_1495082_+|tail	phage tail protein	tail	A5LH39	Enterobacteria_phage	71.3	7.3e-43
WP_001534642.1|1495091_1495790_+|tail	phage minor tail protein L	tail	A0A1B5FP81	Escherichia_phage	76.3	3.2e-104
WP_031606484.1|1495796_1496534_+|tail	phage tail protein	tail	K7PLW1	Enterobacteria_phage	85.0	1.5e-128
WP_001736578.1|1496431_1497079_+|tail	tail assembly protein	tail	A5LH42	Enterobacteria_phage	78.1	2.7e-89
WP_001534665.1|1497141_1500504_+	host specificity protein J	NA	K7PKJ2	Enterobacteria_phage	80.2	0.0e+00
WP_000178849.1|1500542_1500785_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043991221.1|1500839_1503281_+|tail	prophage tail fiber N-terminal domain-containing protein	tail	A0A0K2FIZ6	Escherichia_phage	63.0	9.5e-87
WP_000593428.1|1503277_1504102_+	macro domain-containing protein	NA	A0A0M4QWS3	Salmonella_phage	94.9	4.9e-152
WP_000143155.1|1504091_1504667_+|tail	tail fiber assembly protein	tail	E5G6P1	Salmonella_phage	86.9	1.0e-92
WP_057515280.1|1505316_1505874_+	Ail/Lom family outer membrane beta-barrel protein	NA	A5LH44	Enterobacteria_phage	32.8	3.0e-20
WP_057515787.1|1506164_1506365_-	PagK	NA	NA	NA	NA	NA
WP_071587004.1|1506544_1506706_+	helix-turn-helix domain-containing protein	NA	S4TTF2	Salmonella_phage	97.0	1.5e-09
WP_043991223.1|1506826_1507498_-	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	60.4	4.0e-80
WP_001521673.1|1507749_1507962_+	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.6	1.5e-20
WP_000917260.1|1508408_1509533_+	type III secretion system effector SopF	NA	NA	NA	NA	NA
WP_001033398.1|1510522_1511311_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000497448.1|1511800_1512040_-	virulence protein MsgA	NA	K7P6H1	Enterobacteria_phage	88.5	2.5e-32
WP_001534683.1|1512230_1512752_-	ricin-type beta-trefoil lectin domain protein	NA	NA	NA	NA	NA
WP_001537306.1|1513169_1513382_-	cold shock-like protein CspF	NA	NA	NA	NA	NA
WP_024134152.1|1513513_1513777_-	virulence protein PagD	NA	NA	NA	NA	NA
WP_000789472.1|1514581_1515139_+	virulence membrane protein PagC	NA	Q9LA63	Enterobacterial_phage	33.0	2.2e-15
WP_000977722.1|1516376_1516721_-	c-type lysozyme inhibitor	NA	NA	NA	NA	NA
WP_077905118.1|1517423_1517654_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001218118.1|1517848_1518316_+	Hsp20 family protein	NA	NA	NA	NA	NA
WP_000780159.1|1518654_1519698_+	exo-alpha-sialidase	NA	NA	NA	NA	NA
WP_000929974.1|1519780_1520311_-	cytochrome b	NA	A0A0U2QLA7	Escherichia_phage	70.5	2.8e-36
WP_000182479.1|1520459_1520774_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000946087.1|1521455_1523090_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_001520270.1|1523089_1524064_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000966636.1|1524053_1524866_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000950206.1|1524859_1525657_+	ATP-binding cassette domain-containing protein	NA	A0A2R8FG22	Brazilian_cedratvirus	31.2	4.7e-11
WP_000947455.1|1525650_1526241_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_000456065.1|1526322_1527456_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_001183697.1|1527649_1527976_+	four-helix bundle copper-binding protein	NA	NA	NA	NA	NA
WP_001537483.1|1528172_1528820_+	metal-binding protein ZinT	NA	NA	NA	NA	NA
WP_000502119.1|1529008_1529467_+|transposase	IS200/IS605-like element IS200F family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	1.0e-13
>prophage 6
NZ_LN890520	Salmonella enterica subsp. enterica serovar Weltevreden strain 2511STDY5462413 chromosome 1	5129845	2286383	2314088	5129845	plate,transposase	uncultured_Caudovirales_phage(42.86%)	19	NA	NA
WP_086011254.1|2286383_2287546_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	41.5	3.4e-50
WP_000739390.1|2287739_2288705_-	sel1 repeat family protein	NA	NA	NA	NA	NA
WP_072141715.1|2288772_2289285_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001534617.1|2289393_2289864_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043991203.1|2292634_2292916_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149795581.1|2292956_2294075_-	DUF4329 domain-containing protein	NA	A0A2H4JHK7	uncultured_Caudovirales_phage	41.3	1.4e-21
WP_086011251.1|2295028_2296190_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	41.9	6.2e-52
WP_000081842.1|2296305_2297508_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	71.5	4.4e-77
WP_165899064.1|2297587_2298172_-	RHS domain-containing protein	NA	A0A2H4JHK7	uncultured_Caudovirales_phage	45.0	4.4e-22
WP_130559205.1|2298216_2298678_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000335208.1|2298703_2300500_-	RHS repeat protein	NA	A0A2H4JFP5	uncultured_Caudovirales_phage	43.3	1.8e-21
WP_001534622.1|2300504_2300717_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000103450.1|2304988_2307130_-	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	26.2	2.6e-24
WP_001142967.1|2307352_2307871_-	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_000031252.1|2308498_2309002_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_000058003.1|2309292_2310765_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_000611700.1|2310761_2311178_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_000393864.1|2311182_2313036_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_000509050.1|2312999_2314088_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
>prophage 7
NZ_LN890520	Salmonella enterica subsp. enterica serovar Weltevreden strain 2511STDY5462413 chromosome 1	5129845	2398001	2407172	5129845	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
WP_000195334.1|2398001_2400035_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.6	1.0e-54
WP_000703137.1|2400275_2400734_+	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	72.5	8.4e-53
WP_001265351.1|2400905_2401436_+	YehR family lipoprotein	NA	NA	NA	NA	NA
WP_000950422.1|2401492_2401960_-	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	89.7	1.1e-73
WP_000598637.1|2402006_2402726_-	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_000272850.1|2402722_2404408_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.3	4.8e-279
WP_001240418.1|2404630_2405362_+	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
WP_001261696.1|2405421_2405529_+	protein YohO	NA	NA	NA	NA	NA
WP_000824854.1|2405509_2406241_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000569166.1|2406224_2407172_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.2	1.7e-23
>prophage 8
NZ_LN890520	Salmonella enterica subsp. enterica serovar Weltevreden strain 2511STDY5462413 chromosome 1	5129845	2761991	2817228	5129845	holin,integrase,transposase,terminase,tail	Salmonella_phage(57.69%)	58	2782215:2782230	2818614:2818629
WP_000075924.1|2761991_2762183_+	DUF2633 family protein	NA	G9L6F2	Escherichia_phage	84.1	6.4e-23
WP_001049612.1|2762423_2762939_+	glycine zipper 2TM domain-containing protein	NA	G9L6F1	Escherichia_phage	84.8	1.2e-47
WP_000755800.1|2762954_2763494_+	DUF5384 family protein	NA	G9L6F0	Escherichia_phage	77.7	1.0e-25
WP_000651379.1|2763722_2764466_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052904484.1|2764834_2765323_-	DUF2514 family protein	NA	A0A193GYU6	Enterobacter_phage	61.0	4.6e-41
WP_052904486.1|2765319_2765799_-	TIGR02594 family protein	NA	A0A222YWL8	Escherichia_phage	66.9	5.1e-61
WP_052904489.1|2765791_2766097_-|holin	phage holin family protein	holin	T1SA10	Salmonella_phage	100.0	1.1e-48
WP_001275998.1|2766083_2766488_-	membrane protein	NA	T1SA79	Salmonella_phage	100.0	9.9e-66
WP_052904491.1|2766670_2767777_+	acyltransferase	NA	Q716G0	Shigella_phage	27.9	1.9e-18
WP_077943582.1|2767790_2770097_-	right-handed parallel beta-helix repeat-containing protein	NA	A0A1X9I9I2	Salmonella_phage	85.9	2.7e-272
WP_052904494.1|2770294_2770555_+	hypothetical protein	NA	T1SA06	Salmonella_phage	98.8	2.2e-42
WP_052938612.1|2770755_2773230_-	hypothetical protein	NA	T1S9I6	Salmonella_phage	95.9	0.0e+00
WP_052938611.1|2773234_2775037_-	hypothetical protein	NA	T1SAQ5	Salmonella_phage	86.0	5.7e-270
WP_057515127.1|2775033_2777847_-	hypothetical protein	NA	T1SBJ1	Salmonella_phage	84.7	0.0e+00
WP_052904504.1|2777859_2778402_-	hypothetical protein	NA	Q858G1	Salmonella_phage	88.3	3.1e-70
WP_052904506.1|2778401_2778866_-	hypothetical protein	NA	T1SA73	Salmonella_phage	96.1	3.8e-85
WP_052938609.1|2778865_2781343_-	hypothetical protein	NA	Q858G3	Salmonella_phage	95.8	0.0e+00
WP_057515128.1|2781342_2781948_-	hypothetical protein	NA	T1SAQ2	Salmonella_phage	98.5	2.0e-110
WP_057515129.1|2781947_2782271_-	hypothetical protein	NA	A0A193GYH8	Enterobacter_phage	72.8	1.7e-36
2782215:2782230	attL	TTTACCATCCTCATCC	NA	NA	NA	NA
WP_052904514.1|2782322_2782703_-	hypothetical protein	NA	G9L6C7	Escherichia_phage	51.2	6.1e-25
WP_057515130.1|2782713_2783154_-	hypothetical protein	NA	A0A193GYT9	Enterobacter_phage	91.8	2.8e-66
WP_052904518.1|2783205_2784192_-	hypothetical protein	NA	G9L6C5	Escherichia_phage	89.0	5.6e-171
WP_052904520.1|2784206_2784914_-	peptidase	NA	T1SAP9	Salmonella_phage	82.3	7.8e-66
WP_052904522.1|2784916_2785213_-	hypothetical protein	NA	T1SBI9	Salmonella_phage	79.6	2.4e-37
WP_057515131.1|2785209_2786880_-|tail	phage tail protein	tail	T1S9Z7	Salmonella_phage	97.1	6.3e-308
WP_000334867.1|2786894_2787101_-	hypothetical protein	NA	T1SA67	Salmonella_phage	100.0	5.7e-09
WP_057515132.1|2787956_2788334_+	hypothetical protein	NA	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	72.0	3.8e-43
WP_086011248.1|2788463_2789718_+|transposase	IS3-like element ISSen1 family transposase	transposase	Q6H9S3	Enterobacteria_phage	34.5	9.8e-19
WP_057515140.1|2789759_2790041_+	hypothetical protein	NA	NA	NA	NA	NA
WP_057515141.1|2790031_2791507_-	hypothetical protein	NA	Q858H3	Salmonella_phage	96.9	3.1e-290
WP_171823882.1|2791503_2792178_-|terminase	terminase small subunit	terminase	M1F219	Salmonella_phage	97.7	3.3e-114
WP_057515142.1|2792200_2792539_-	hypothetical protein	NA	Q858C6	Salmonella_phage	85.7	3.5e-48
WP_052904534.1|2792531_2792711_-	hypothetical protein	NA	NA	NA	NA	NA
WP_057515143.1|2792710_2793292_-	DUF551 domain-containing protein	NA	E7C9P2	Salmonella_phage	53.4	2.8e-45
WP_057515152.1|2793288_2793582_-	hypothetical protein	NA	A0A1V0E5L2	Salmonella_phage	93.8	1.2e-47
WP_057515144.1|2793587_2793824_-	hypothetical protein	NA	NA	NA	NA	NA
WP_071828148.1|2793823_2794678_-	ead/Ea22-like family protein	NA	A0A0F6R7P8	Escherichia_coli_O157_typing_phage	44.6	5.8e-47
WP_052904543.1|2795194_2795539_-	DUF1064 domain-containing protein	NA	T1SA23	Salmonella_phage	95.6	2.4e-60
WP_052904544.1|2795659_2796475_-	Pyocin large subunit	NA	T1SA92	Salmonella_phage	95.6	1.4e-146
WP_052904546.1|2796464_2797526_-	DNA cytosine methyltransferase	NA	Q858D4	Salmonella_phage	73.0	2.5e-161
WP_003037808.1|2797869_2798103_-	hypothetical protein	NA	Q858D6	Salmonella_phage	100.0	5.4e-40
WP_003037805.1|2798258_2798855_+	helix-turn-helix transcriptional regulator	NA	Q858D7	Salmonella_phage	99.0	5.9e-107
WP_001839088.1|2799080_2799230_+	hypothetical protein	NA	T1SA20	Salmonella_phage	98.0	2.6e-24
WP_052904550.1|2799234_2800227_+	hypothetical protein	NA	M9P0E1	Enterobacteria_phage	76.4	3.9e-55
WP_057515146.1|2800234_2800537_+	hypothetical protein	NA	T1SA88	Salmonella_phage	83.0	5.9e-39
WP_052904554.1|2800533_2800740_+	MarR family transcriptional regulator	NA	A0A173GC36	Salmonella_phage	86.0	1.0e-18
WP_052904556.1|2800736_2801558_+	PD-(D/E)XK nuclease-like domain-containing protein	NA	A0A193GYK2	Enterobacter_phage	96.3	2.0e-158
WP_057515147.1|2801554_2802472_+	phage recombination protein Bet	NA	A0A1I9KF88	Aeromonas_phage	55.4	2.0e-69
WP_000816432.1|2802518_2802767_+	AlpA family phage regulatory protein	NA	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	81.7	1.5e-32
WP_052904564.1|2802876_2803176_+	perC transcriptional activator family protein	NA	T1S9J5	Salmonella_phage	98.0	6.9e-48
WP_000181469.1|2803168_2803348_+	DUF1317 family protein	NA	A0A193GYJ8	Enterobacter_phage	84.5	1.8e-19
WP_057515148.1|2803344_2803923_+	adenine methylase	NA	Q858E6	Salmonella_phage	94.3	1.4e-108
WP_052904562.1|2804383_2805634_-|integrase	site-specific integrase	integrase	A0A0F6TJM5	Escherichia_coli_O157_typing_phage	90.8	4.9e-220
WP_000138293.1|2805826_2807404_-	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA	NA
WP_000944174.1|2807473_2808940_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	38.7	4.0e-88
WP_000953169.1|2809100_2810450_+	exodeoxyribonuclease VII large subunit	NA	A0A2H4UVM9	Bodo_saltans_virus	35.6	4.4e-41
WP_057515149.1|2810611_2816557_-	fibronectin-binding autotransporter adhesin ShdA	NA	A0A2L1IV18	Escherichia_phage	26.3	2.4e-27
WP_001667815.1|2817114_2817228_-|transposase	transposase	transposase	NA	NA	NA	NA
2818614:2818629	attR	TTTACCATCCTCATCC	NA	NA	NA	NA
>prophage 9
NZ_LN890520	Salmonella enterica subsp. enterica serovar Weltevreden strain 2511STDY5462413 chromosome 1	5129845	2890839	3059638	5129845	portal,head,tRNA,holin,integrase,lysis,capsid,plate,transposase,terminase,tail	Salmonella_phage(61.82%)	175	2917080:2917096	3004498:3004514
WP_086011248.1|2890839_2892095_-|transposase	IS3-like element ISSen1 family transposase	transposase	Q6H9S3	Enterobacteria_phage	34.5	9.8e-19
WP_000970061.1|2892200_2896088_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	57.6	8.0e-128
WP_000734249.1|2896343_2897888_+	membrane-bound lytic murein transglycosylase MltF	NA	NA	NA	NA	NA
WP_001134564.1|2897938_2898490_-|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	NA	NA	NA	NA
WP_000253558.1|2898514_2899150_-	phosphatidylglycerophosphatase C	NA	NA	NA	NA	NA
WP_000361662.1|2899153_2900515_-	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_001048531.1|2900525_2901419_-	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA	NA
WP_000995694.1|2901534_2902383_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000684023.1|2902421_2903339_-	oxidoreductase	NA	NA	NA	NA	NA
WP_001276364.1|2903360_2904557_-	OFA family MFS transporter	NA	NA	NA	NA	NA
WP_015633058.1|2904672_2905584_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	24.4	1.3e-09
WP_001196291.1|2905636_2905897_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.5	4.9e-18
WP_000986043.1|2906008_2906389_-	holo-ACP synthase	NA	NA	NA	NA	NA
WP_000818964.1|2906388_2907120_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_000399382.1|2907131_2907860_-	DNA repair protein RecO	NA	NA	NA	NA	NA
WP_000102230.1|2907871_2908777_-	GTPase Era	NA	NA	NA	NA	NA
WP_001068341.1|2908773_2909454_-	ribonuclease III	NA	A0A2K9L5P0	Tupanvirus	31.8	7.4e-21
WP_000002559.1|2909727_2910702_-	signal peptidase I	NA	NA	NA	NA	NA
WP_000790154.1|2910718_2912518_-	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	24.9	7.2e-23
WP_071587004.1|2912961_2913123_-	helix-turn-helix domain-containing protein	NA	S4TTF2	Salmonella_phage	97.0	1.5e-09
WP_057516116.1|2913302_2913503_+	PagK	NA	NA	NA	NA	NA
WP_057515233.1|2914230_2914752_-|tail	tail fiber assembly protein	tail	A0A0U2QV64	Escherichia_phage	52.0	2.5e-45
WP_057515234.1|2914766_2916407_-	hypothetical protein	NA	A0A1B0VFW4	Salmonella_phage	71.3	6.9e-158
WP_057515235.1|2916406_2917087_-	DUF2612 domain-containing protein	NA	A0A0M5M1K4	Salmonella_phage	99.1	1.4e-128
2917080:2917096	attL	TTGCTCATGCTGCCACC	NA	NA	NA	NA
WP_057515236.1|2917083_2918283_-|plate	baseplate J/gp47 family protein	plate	A0A0M4RD32	Salmonella_phage	97.5	3.2e-213
WP_001270643.1|2918283_2918637_-	hypothetical protein	NA	A0A0M4R339	Salmonella_phage	97.4	2.1e-59
WP_000301077.1|2918636_2919389_-	hypothetical protein	NA	A0A0M5M1K7	Salmonella_phage	72.1	2.5e-94
WP_000027041.1|2919447_2919828_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000050388.1|2919824_2920598_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000819157.1|2920739_2921072_-	hypothetical protein	NA	A0A0M4RTY3	Salmonella_phage	69.1	1.7e-23
WP_057515237.1|2921068_2922136_-	hypothetical protein	NA	A0A0M4QX01	Salmonella_phage	91.8	6.9e-175
WP_031571512.1|2922138_2922441_-	hypothetical protein	NA	A0A0M4R5B7	Salmonella_phage	99.0	1.6e-52
WP_057515238.1|2922440_2923028_-	hypothetical protein	NA	A0A0M3ULD5	Salmonella_phage	91.3	2.7e-88
WP_057515239.1|2923027_2925037_-	transglycosylase SLT domain-containing protein	NA	A0A0M4REK7	Salmonella_phage	97.5	0.0e+00
WP_057515240.1|2925214_2925667_-	hypothetical protein	NA	A0A0M4S6U8	Salmonella_phage	77.9	6.3e-61
WP_057515241.1|2925670_2926111_-	DUF3277 family protein	NA	A0A2H4J619	uncultured_Caudovirales_phage	74.0	2.7e-56
WP_057515242.1|2926122_2927268_-	DUF3383 domain-containing protein	NA	A0A2H4J8G4	uncultured_Caudovirales_phage	75.6	2.0e-164
WP_023261525.1|2927271_2927835_-	hypothetical protein	NA	A0A0M4R331	Salmonella_phage	78.7	4.7e-82
WP_001142474.1|2927809_2928199_-	hypothetical protein	NA	A0A0M3ULK0	Salmonella_phage	97.7	6.0e-68
WP_000008736.1|2928185_2928740_-	hypothetical protein	NA	A0A0M4S631	Salmonella_phage	99.5	1.8e-94
WP_057515243.1|2928736_2929144_-	DUF4054 domain-containing protein	NA	A0A0M5M3S2	Salmonella_phage	99.3	1.1e-72
WP_001040702.1|2929109_2929478_-	hypothetical protein	NA	A0A0M4RTX5	Salmonella_phage	100.0	8.7e-61
WP_000627464.1|2929519_2930461_-	DUF2184 domain-containing protein	NA	A0A0M3ULD3	Salmonella_phage	100.0	3.1e-179
WP_057515244.1|2930472_2930970_-	hypothetical protein	NA	A0A0M4QWZ6	Salmonella_phage	99.4	1.1e-87
WP_000873182.1|2930974_2932207_-	DUF2213 domain-containing protein	NA	A0A0M4R5A6	Salmonella_phage	99.0	1.4e-227
WP_138010671.1|2932221_2932959_-|head	phage head morphogenesis protein	head	A0A0M4REK0	Salmonella_phage	88.1	7.8e-101
WP_057515245.1|2932846_2934313_-	DUF1073 domain-containing protein	NA	A0A0M4S6U1	Salmonella_phage	99.4	4.4e-281
WP_057515246.1|2934312_2935935_-	TerL protein	NA	A0A0M5M1R6	Salmonella_phage	99.1	0.0e+00
WP_057515247.1|2935937_2936567_-	hypothetical protein	NA	A0A0M3ULJ9	Salmonella_phage	85.2	6.9e-90
WP_046598537.1|2936627_2937131_-	hypothetical protein	NA	NA	NA	NA	NA
WP_057515248.1|2937233_2937776_-	DUF2514 family protein	NA	NA	NA	NA	NA
WP_057515249.1|2937772_2938399_-	glycoside hydrolase family 19 protein	NA	Q858F0	Salmonella_phage	80.7	1.2e-94
WP_000226307.1|2938398_2938680_-|holin	phage holin family protein	holin	K7PKN9	Enterobacterial_phage	80.6	2.6e-36
WP_001294873.1|2938666_2939056_-|holin	phage holin family protein	holin	K7PHB9	Enterobacterial_phage	72.5	4.8e-41
WP_023221874.1|2939145_2939334_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001749676.1|2939838_2940636_-	antitermination protein	NA	A0A0M4S661	Salmonella_phage	99.2	6.8e-151
WP_001617856.1|2940625_2940772_-	YlcG family protein	NA	A0A0M5M7B2	Salmonella_phage	97.9	4.3e-19
WP_057515225.1|2940768_2941410_-	recombination protein NinG	NA	S4TSR3	Salmonella_phage	98.1	4.1e-114
WP_001241022.1|2941412_2941619_-	hypothetical protein	NA	S4TNP0	Salmonella_phage	98.5	4.6e-35
WP_000929801.1|2941618_2942221_-	DUF1367 family protein	NA	S4TTI0	Salmonella_phage	98.5	4.9e-109
WP_001804676.1|2942260_2942500_-	hypothetical protein	NA	H6WRY6	Salmonella_phage	100.0	5.9e-42
WP_001217670.1|2942555_2942795_-	DinI family protein	NA	H6WRY5	Salmonella_phage	100.0	3.9e-38
WP_000208141.1|2943314_2944094_-	DUF550 domain-containing protein	NA	S4TSR6	Salmonella_phage	67.0	1.6e-91
WP_000224239.1|2944104_2944362_-	hypothetical protein	NA	A0A192Y5W0	Salmonella_phage	95.3	4.5e-40
WP_000215887.1|2944363_2944897_-	hypothetical protein	NA	A0A192Y7N1	Salmonella_phage	89.8	8.1e-92
WP_000065341.1|2944893_2945295_-	ParB/RepB/Spo0J family partition protein	NA	S4TTI6	Salmonella_phage	100.0	2.9e-73
WP_000788825.1|2945339_2946041_-	hypothetical protein	NA	A0A0M3ULE2	Salmonella_phage	99.6	8.4e-129
WP_000024046.1|2946037_2946943_-	replication protein	NA	A0A0M5M7Y1	Salmonella_phage	99.7	9.1e-176
WP_072141721.1|2947034_2947409_-	hypothetical protein	NA	S4TTD7	Salmonella_phage	98.4	1.1e-63
WP_000869364.1|2947374_2947611_-	helix-turn-helix domain-containing protein	NA	H6WRX5	Salmonella_phage	100.0	1.8e-38
WP_001009038.1|2947740_2948145_+	transcriptional regulator	NA	H6WRX4	Salmonella_phage	100.0	4.2e-72
WP_000402505.1|2948434_2948659_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000917562.1|2948760_2948919_+	hypothetical protein	NA	H6WRX3	Salmonella_phage	98.1	9.0e-23
WP_023252309.1|2948940_2949291_+	hypothetical protein	NA	S4TSN6	Salmonella_phage	94.8	1.2e-59
WP_057515224.1|2949417_2952345_+	PD-(D/E)XK nuclease-like domain-containing protein	NA	H6WRX1	Salmonella_phage	96.4	0.0e+00
WP_001539618.1|2952307_2953465_+	recombinase RecT	NA	S4TTE8	Salmonella_phage	100.0	1.6e-217
WP_001237031.1|2953507_2953747_+	DUF4060 family protein	NA	S4TR31	Salmonella_phage	100.0	2.0e-37
WP_001670787.1|2953787_2954072_+	excisionase Xis	NA	H6WRW8	Salmonella_phage	86.2	3.1e-42
WP_001007936.1|2954049_2955279_-|integrase	site-specific integrase	integrase	H6WRW7	Salmonella_phage	93.9	1.4e-232
WP_000589087.1|2955776_2956256_-	SoxR-reducing system protein RseC	NA	NA	NA	NA	NA
WP_000812019.1|2956252_2957209_-	sigma-E factor regulatory protein RseB	NA	NA	NA	NA	NA
WP_001168374.1|2957208_2957859_-	anti-sigma-E factor RseA	NA	NA	NA	NA	NA
WP_000003307.1|2957890_2958466_-	RNA polymerase sigma factor RpoE	NA	NA	NA	NA	NA
WP_014344135.1|2958462_2958627_-	rpoE leader peptide RseD	NA	NA	NA	NA	NA
WP_001535060.1|2958890_2960513_+	L-aspartate oxidase	NA	NA	NA	NA	NA
WP_000083345.1|2960497_2961235_-|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	tRNA	NA	NA	NA	NA
WP_000219174.1|2961365_2962700_+	ATP-dependent RNA helicase SrmB	NA	A0A1B1IS59	uncultured_Mediterranean_phage	29.7	1.6e-43
WP_001535061.1|2962717_2963617_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000188415.1|2963719_2964307_+	cysteine/O-acetylserine transporter	NA	NA	NA	NA	NA
WP_000627811.1|2964368_2964752_-	autonomous glycyl radical cofactor GrcA	NA	Q7Y524	Enterobacteria_phage	74.0	6.1e-33
WP_000179978.1|2965070_2965760_+	uracil-DNA glycosylase	NA	A0A172DS90	Canid_alphaherpesvirus	49.5	4.6e-55
WP_000997368.1|2965875_2966913_-|tRNA	tRNA/rRNA methyltransferase	tRNA	NA	NA	NA	NA
WP_001098732.1|2967116_2967536_+	thioredoxin TrxC	NA	A0A0K2FIM3	Achromobacter_phage	40.6	1.2e-16
WP_000183637.1|2967608_2968289_+	DTW domain-containing protein	NA	NA	NA	NA	NA
WP_000082657.1|2968342_2971003_+	protein lysine acetyltransferase	NA	NA	NA	NA	NA
WP_000949287.1|2971117_2972473_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_001264475.1|2972517_2972841_+	YfiM family lipoprotein	NA	NA	NA	NA	NA
WP_000807818.1|2972837_2974139_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	30.4	1.2e-43
WP_000985658.1|2974242_2974698_-	DUF4385 domain-containing protein	NA	E3SMI8	Prochlorococcus_phage	49.3	8.6e-34
WP_001235092.1|2980845_2983419_-	ATP-dependent chaperone ClpB	NA	H6X3M6	Enterobacteria_phage	35.5	2.6e-127
WP_000992643.1|2983548_2984280_-	polyphenol oxidase	NA	NA	NA	NA	NA
WP_000079130.1|2984276_2985257_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA	NA
WP_000197660.1|2985388_2986126_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_000178449.1|2986397_2986736_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA	NA
WP_010989056.1|2986839_2986887_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000200078.1|2986986_2988147_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA	NA
WP_000210993.1|2988107_2989016_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA	NA
WP_000225191.1|2989073_2990195_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA	NA
WP_001168062.1|2990204_2991275_-	3-deoxy-7-phosphoheptulonate synthase AroF	NA	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	51.8	2.4e-90
WP_001212379.1|2991714_2992233_+	YfiR family protein	NA	NA	NA	NA	NA
WP_001030985.1|2992225_2993446_+	diguanylate cyclase DgcN	NA	A0A2K8I9Y5	Pseudomonas_phage	36.2	5.8e-08
WP_000218688.1|2993698_2994748_-|integrase	site-specific integrase	integrase	A0A0M4S6G4	Salmonella_phage	92.0	3.0e-191
WP_001534865.1|2994771_2995110_-	DUF2511 domain-containing protein	NA	NA	NA	NA	NA
WP_043991250.1|2995119_2995965_-	phage repressor protein CI	NA	Q6K1G0	Salmonella_virus	73.3	1.7e-115
WP_001534859.1|2996078_2996432_+	hypothetical protein	NA	Q6K1F9	Salmonella_virus	99.1	3.0e-58
WP_001534856.1|2996482_2996992_+	phage regulatory CII family protein	NA	Q6K1F8	Salmonella_virus	100.0	4.3e-90
WP_000920169.1|2996999_2997200_+	DUF2724 domain-containing protein	NA	Q6K1F7	Salmonella_virus	100.0	1.2e-32
WP_000963463.1|2997163_2997502_+	DUF5347 domain-containing protein	NA	A0A218M4I7	Erwinia_phage	94.6	7.3e-54
WP_001534891.1|2997566_2997800_+	DUF2732 domain-containing protein	NA	Q6K1F6	Salmonella_virus	100.0	7.5e-34
WP_001534858.1|2997799_2998024_+	TraR/DksA family transcriptional regulator	NA	Q6K1F5	Salmonella_virus	98.6	1.5e-34
WP_153259982.1|2998045_2998639_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077905127.1|2998637_3000890_+	replication endonuclease	NA	A0A218M4H2	Erwinia_phage	94.4	0.0e+00
WP_025711966.1|3001232_3001880_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001534892.1|3001882_3003079_-	DUF262 domain-containing protein	NA	A0A0R6PKN1	Moraxella_phage	28.0	5.1e-17
WP_001534869.1|3003482_3004505_-|portal	phage portal protein	portal	Q6K1J0	Salmonella_virus	99.1	9.5e-198
WP_001534851.1|3004501_3005248_-	hypothetical protein	NA	O80303	Escherichia_phage	93.1	9.2e-134
3004498:3004514	attR	TTGCTCATGCTGCCACC	NA	NA	NA	NA
WP_001534822.1|3005247_3007017_-|terminase	terminase ATPase subunit family protein	terminase	S4TT96	Salmonella_phage	98.6	0.0e+00
WP_001085937.1|3007182_3008037_+|capsid	capsid scaffolding protein	capsid	A0A0M3UL81	Salmonella_phage	99.3	1.1e-146
WP_001534863.1|3008113_3009181_+|capsid	phage major capsid protein, P2 family	capsid	A0A0M4R4W2	Salmonella_phage	99.4	4.5e-198
WP_001534893.1|3009184_3009934_+|terminase	terminase endonuclease subunit	terminase	Q6K1I5	Salmonella_virus	98.0	2.6e-128
WP_000214255.1|3010027_3010534_+|head	head completion/stabilization protein	head	S4TNY1	Salmonella_phage	100.0	1.3e-91
WP_001534827.1|3010533_3010737_+|tail	tail protein X	tail	A0A0M3ULF4	Salmonella_phage	98.5	4.0e-31
WP_000134659.1|3010740_3011037_+|holin	holin	holin	S4TP56	Salmonella_phage	100.0	4.4e-47
WP_001144116.1|3011023_3011521_+	glycoside hydrolase family 104 protein	NA	S4TUB1	Salmonella_phage	99.4	1.2e-92
WP_000866102.1|3011517_3011931_+|lysis	LysB family phage lysis regulatory protein	lysis	S4TRW3	Salmonella_phage	100.0	2.6e-45
WP_001394645.1|3011902_3012076_+	hypothetical protein	NA	S4TNY4	Salmonella_phage	98.2	2.8e-25
WP_001169074.1|3012038_3012506_+|tail	phage tail protein	tail	S4TTA5	Salmonella_phage	100.0	1.1e-84
WP_001293096.1|3012498_3012948_+	phage virion morphogenesis protein	NA	S4TP59	Salmonella_phage	99.3	4.2e-73
WP_001534860.1|3013016_3013658_+|plate	phage baseplate assembly protein V	plate	Q6K1H6	Salmonella_virus	99.1	1.6e-113
WP_000127148.1|3013654_3014002_+	GPW/gp25 family protein	NA	S4TRW8	Salmonella_phage	100.0	2.5e-57
WP_001534894.1|3014008_3014917_+|plate	baseplate assembly protein	plate	S4TNY7	Salmonella_phage	99.7	5.7e-162
WP_001000068.1|3014909_3015440_+|tail	phage tail protein I	tail	S4TTA8	Salmonella_phage	100.0	9.2e-104
WP_000104697.1|3015450_3017565_+|tail	tail fiber protein	tail	Q6K1H2	Salmonella_virus	77.5	8.4e-241
WP_000869699.1|3017577_3018126_+|tail	tail fiber assembly protein	tail	S4TUB9	Salmonella_phage	95.1	1.2e-95
WP_001279030.1|3018260_3019448_+|tail	phage tail sheath protein	tail	Q6K1H0	Salmonella_virus	100.0	2.0e-223
WP_001207675.1|3019463_3019982_+|tail	phage major tail tube protein	tail	S4TNZ0	Salmonella_phage	100.0	6.5e-94
WP_001029726.1|3020044_3020380_+|tail	phage tail assembly protein	tail	S4TTB2	Salmonella_phage	100.0	1.4e-52
WP_085984508.1|3020376_3020532_+|tail	GpE family phage tail protein	tail	Q6K1G8	Salmonella_virus	98.0	8.8e-23
WP_001534881.1|3020524_3022969_+|tail	phage tail tape measure protein	tail	A0A0M3UL85	Salmonella_phage	87.7	0.0e+00
WP_001534875.1|3022983_3023469_+|tail	phage tail protein	tail	Q6K1G5	Salmonella_virus	98.8	2.0e-84
WP_025711524.1|3023465_3024635_+	phage late control D family protein	NA	A0A0M5M5V5	Salmonella_phage	97.4	6.6e-211
WP_000972010.1|3024710_3024929_+	DNA-binding transcriptional regulator	NA	Q37973	Salmonella_virus	100.0	1.2e-38
WP_000065257.1|3025073_3025421_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_000469813.1|3025461_3026229_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_000043266.1|3026273_3026822_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_000256453.1|3026840_3027089_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_000460052.1|3027402_3028764_-	signal recognition particle protein	NA	NA	NA	NA	NA
WP_001537507.1|3028929_3029721_+	inner membrane protein YpjD	NA	NA	NA	NA	NA
WP_130559217.1|3029740_3031027_+	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_001287924.1|3031147_3031753_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001518875.1|3031787_3032378_-	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_001059155.1|3032501_3033380_+	NAD(+) kinase	NA	NA	NA	NA	NA
WP_000880965.1|3033465_3035127_+	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_001203445.1|3035275_3035614_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_001112990.1|3035779_3036070_-	RnfH family protein	NA	NA	NA	NA	NA
WP_000242603.1|3036059_3036536_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_001518569.1|3036685_3037168_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	47.4	5.2e-29
WP_001535045.1|3037787_3049262_+	biofilm-associated protein BapA	NA	NA	NA	NA	NA
WP_000533868.1|3049326_3050736_+	TolC family outer membrane protein	NA	NA	NA	NA	NA
WP_000196141.1|3050732_3052913_+	type I secretion system permease/ATPase	NA	F2Y302	Organic_Lake_phycodnavirus	34.0	1.3e-18
WP_000342601.1|3052920_3054084_+	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_000388873.1|3055041_3055581_-	phase 1 flagellin gene repressor FljA	NA	NA	NA	NA	NA
WP_000079789.1|3055648_3057151_-	flagellin FliC	NA	NA	NA	NA	NA
WP_000190912.1|3057242_3057815_+	flagellar phase variation DNA invertase Hin	NA	A0A0A7NPV4	Enterobacteria_phage	72.6	8.8e-68
WP_000081842.1|3058435_3059638_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	71.5	4.4e-77
>prophage 10
NZ_LN890520	Salmonella enterica subsp. enterica serovar Weltevreden strain 2511STDY5462413 chromosome 1	5129845	4662599	4710536	5129845	portal,head,protease,tRNA,holin,integrase,capsid,plate,transposase,terminase,tail	Salmonella_phage(76.36%)	62	4673667:4673682	4709776:4709791
WP_000081842.1|4662599_4663802_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	71.5	4.4e-77
WP_000416271.1|4663945_4664461_-	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA	NA
WP_001039342.1|4664707_4666018_+	conjugal transfer protein TraF	NA	NA	NA	NA	NA
WP_000956555.1|4666326_4666860_+	hypothetical protein	NA	K7PKJ4	Enterobacteria_phage	88.7	1.3e-89
WP_000678277.1|4667053_4667227_+	hypothetical protein	NA	K7PJQ2	Enterobacteria_phage	98.2	2.9e-22
WP_023241351.1|4667289_4667562_-	pyocin activator PrtN family protein	NA	S5MQM5	Escherichia_phage	94.3	2.8e-40
WP_057515273.1|4667603_4668173_-	3'-5' exoribonuclease	NA	K7PLW7	Enterobacteria_phage	80.5	4.0e-89
WP_057515274.1|4668176_4668887_-	hypothetical protein	NA	Q8HAA7	Salmonella_phage	58.5	2.9e-76
WP_057515272.1|4668891_4669251_-	hypothetical protein	NA	A0A1L7N114	Ralstonia_phage	49.1	2.7e-22
WP_023253683.1|4669250_4669790_-	hypothetical protein	NA	A0A192Y7N1	Salmonella_phage	71.3	2.5e-64
WP_000008351.1|4669860_4670400_-	hypothetical protein	NA	A0A192Y8M4	Salmonella_phage	100.0	2.6e-98
WP_057515270.1|4670536_4671364_-	DUF2303 family protein	NA	Q8HAA2	Salmonella_phage	99.6	1.7e-152
WP_000997190.1|4671421_4671793_-	hypothetical protein	NA	Q8HAA1	Salmonella_phage	100.0	1.1e-63
WP_057515283.1|4672328_4672646_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001020644.1|4672950_4673646_-	helix-turn-helix transcriptional regulator	NA	Q8HAA0	Salmonella_phage	99.6	2.7e-127
4673667:4673682	attL	TTGCGCATTGTGCAAA	NA	NA	NA	NA
WP_001191666.1|4673743_4673968_+	helix-turn-helix transcriptional regulator	NA	A0A1C9IHV8	Salmonella_phage	100.0	1.9e-34
WP_057515702.1|4673996_4674551_+	hypothetical protein	NA	A0A1C9II13	Salmonella_phage	98.9	7.6e-101
WP_057515703.1|4674547_4675690_+	Rha family phage regulatory protein	NA	A0A1C9IHV9	Salmonella_phage	88.4	2.7e-185
WP_000620702.1|4675686_4675911_+	hypothetical protein	NA	A0A1C9II64	Salmonella_phage	100.0	3.3e-39
WP_023210476.1|4675907_4676852_+	helix-turn-helix domain-containing protein	NA	U5P0A0	Shigella_phage	85.7	1.7e-129
WP_001669427.1|4676853_4677336_+	PerC family transcriptional regulator	NA	Q8HA95	Salmonella_phage	98.1	6.0e-86
WP_057517222.1|4677335_4678214_+	phage N-6-adenine-methyltransferase	NA	Q8HA94	Salmonella_phage	87.4	5.0e-147
WP_057515279.1|4678206_4679937_+	DNA cytosine methyltransferase	NA	H9C171	Pectobacterium_phage	58.4	7.9e-221
WP_023252183.1|4679933_4680254_+	hypothetical protein	NA	S5FXP5	Shigella_phage	56.6	4.4e-24
WP_057515278.1|4680250_4680640_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A192Y8N5	Salmonella_phage	87.6	3.2e-61
WP_057515277.1|4680656_4681517_+	KilA-N domain-containing protein	NA	Q8HA92	Salmonella_phage	99.3	2.4e-162
WP_071828165.1|4681524_4682514_+	DUF968 domain-containing protein	NA	A0A1C9IHZ5	Salmonella_phage	97.9	9.9e-192
WP_057515275.1|4682527_4683280_+	antitermination protein	NA	A0A192Y5X6	Salmonella_phage	93.2	2.9e-135
WP_000508330.1|4683459_4683678_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000658039.1|4683958_4684147_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000081842.1|4684562_4685765_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	71.5	4.4e-77
WP_000226307.1|4685915_4686197_+|holin	phage holin family protein	holin	K7PKN9	Enterobacterial_phage	80.6	2.6e-36
WP_057515106.1|4686196_4686811_+	glycoside hydrolase family 19 protein	NA	Q8HA86	Salmonella_phage	85.3	3.3e-97
WP_057515107.1|4687370_4687721_+	HNH endonuclease	NA	Q8HA82	Salmonella_phage	94.8	1.2e-62
WP_000929191.1|4687845_4688340_+|terminase	phage terminase small subunit P27 family	terminase	Q8HAD7	Salmonella_phage	100.0	4.6e-89
WP_000088184.1|4688336_4690070_+|terminase	terminase large subunit	terminase	Q8HAD6	Salmonella_phage	99.7	0.0e+00
WP_000605609.1|4690081_4690264_+	hypothetical protein	NA	Q8HAD5	Salmonella_phage	100.0	1.0e-25
WP_057515108.1|4690263_4691505_+|portal	phage portal protein	portal	Q8HAD4	Salmonella_phage	99.3	1.4e-240
WP_001193639.1|4691482_4692133_+|head,protease	HK97 family phage prohead protease	head,protease	Q8HAD3	Salmonella_phage	100.0	1.5e-119
WP_023210468.1|4692147_4693353_+|capsid	phage major capsid protein	capsid	A0A192Y5T6	Salmonella_phage	99.5	5.9e-223
WP_000601353.1|4693403_4693604_+	hypothetical protein	NA	Q8HAD1	Salmonella_phage	100.0	1.4e-28
WP_000927378.1|4693606_4693930_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A192Y8J4	Salmonella_phage	100.0	6.3e-55
WP_000702409.1|4693926_4694331_+|head	phage head closure protein	head	A0A192Y6C2	Salmonella_phage	99.3	5.4e-72
WP_057515109.1|4694302_4694815_+	hypothetical protein	NA	Q8HAC8	Salmonella_phage	99.4	1.7e-91
WP_000779215.1|4694811_4695372_+	hypothetical protein	NA	A0A192Y5U4	Salmonella_phage	99.5	3.0e-105
WP_023233175.1|4695375_4695540_+	DUF2635 domain-containing protein	NA	Q8HAC6	Salmonella_phage	98.1	3.8e-24
WP_039501613.1|4695529_4697026_+|tail	phage tail sheath subtilisin-like domain-containing protein	tail	A0A192Y7L1	Salmonella_phage	99.6	1.0e-277
WP_000515952.1|4697025_4697382_+|tail	phage tail tube protein	tail	A0A192Y8K0	Salmonella_phage	100.0	2.6e-62
WP_171823883.1|4697411_4697705_+|tail	phage tail assembly protein	tail	Q8HAC3	Salmonella_phage	97.9	3.7e-46
WP_057515111.1|4697789_4699718_+|tail	phage tail tape measure protein	tail	A0A192Y6D8	Salmonella_phage	99.1	0.0e+00
WP_057515112.1|4699751_4701092_+	DNA circularization N-terminal domain-containing protein	NA	A0A192Y5U9	Salmonella_phage	98.9	2.4e-249
WP_057515113.1|4701088_4702147_+|plate	baseplate protein	plate	A0A192Y7L7	Salmonella_phage	99.7	5.0e-202
WP_001273647.1|4702146_4702680_+|plate	phage baseplate assembly protein	plate	Q8HAB9	Salmonella_phage	99.4	1.9e-96
WP_000605051.1|4702684_4703098_+	phage GP46 family protein	NA	A0A192Y6D0	Salmonella_phage	100.0	3.1e-75
WP_057515114.1|4703090_4704170_+|plate	baseplate J/gp47 family protein	plate	A0A192Y6E4	Salmonella_phage	99.4	5.5e-204
WP_057515115.1|4704172_4704760_+	DUF2313 domain-containing protein	NA	A0A192Y5V3	Salmonella_phage	98.5	5.4e-113
WP_057515116.1|4704746_4705988_+	hypothetical protein	NA	Q8HAB4	Salmonella_phage	94.4	6.6e-52
WP_057515117.1|4705990_4706521_+|tail	tail fiber assembly protein	tail	A0A1S6KZZ1	Salmonella_phage	31.8	1.3e-12
WP_167692799.1|4706510_4706654_+	hypothetical protein	NA	NA	NA	NA	NA
WP_057515118.1|4706691_4707825_-	acyltransferase	NA	A0A2H4JA46	uncultured_Caudovirales_phage	33.8	1.7e-38
WP_057515119.1|4708313_4709411_-|integrase	site-specific integrase	integrase	S5MDN5	Escherichia_phage	89.0	4.2e-191
WP_106086587.1|4709498_4710536_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
4709776:4709791	attR	TTGCGCATTGTGCAAA	NA	NA	NA	NA
>prophage 1
NZ_LN890521	Salmonella enterica subsp. enterica serovar Weltevreden strain 2511STDY5462413 plasmid 2, complete sequence	98776	14560	57272	98776	transposase	Shigella_phage(22.22%)	46	NA	NA
WP_000826380.1|14560_15769_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A077SL42	Escherichia_phage	91.0	4.7e-204
WP_001534946.1|16461_16866_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000550116.1|16922_17270_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001159046.1|17364_17511_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001135896.1|17557_18391_+	SAM-dependent DNA methyltransferase	NA	H7BVT3	unidentified_phage	37.4	4.5e-12
WP_043991282.1|18960_19491_+	antirestriction protein	NA	NA	NA	NA	NA
WP_000502119.1|19667_20126_+|transposase	IS200/IS605-like element IS200F family transposase	transposase	D9CGB6	Hyperthermophilic_Archaeal_Virus_2	35.3	5.9e-14
WP_057515499.1|20198_20669_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_001808390.1|21137_21521_+	relaxosome protein TraM	NA	NA	NA	NA	NA
WP_001808391.1|21817_22267_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_133308802.1|22360_23471_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	37.8	1.2e-44
WP_001535116.1|23683_23917_+	TraY domain-containing protein	NA	NA	NA	NA	NA
WP_001054221.1|24033_24393_+	type IV conjugative transfer system pilin TraA	NA	NA	NA	NA	NA
WP_000398849.1|24394_24700_+	type IV conjugative transfer system protein TraL	NA	NA	NA	NA	NA
WP_001535119.1|24719_25283_+	type IV conjugative transfer system protein TraE	NA	NA	NA	NA	NA
WP_004558346.1|25272_26013_+	type-F conjugative transfer system secretin TraK	NA	NA	NA	NA	NA
WP_000024509.1|25999_27361_+	F-type conjugal transfer pilus assembly protein TraB	NA	NA	NA	NA	NA
WP_004558343.1|27471_27696_+	TraR/DksA C4-type zinc finger protein	NA	NA	NA	NA	NA
WP_004558352.1|27806_28421_+	type IV conjugative transfer system lipoprotein TraV	NA	NA	NA	NA	NA
WP_001808381.1|28431_31023_+	type IV secretion system protein TraC	NA	NA	NA	NA	NA
WP_004558355.1|31019_31484_+	type-F conjugative transfer system protein TrbI	NA	NA	NA	NA	NA
WP_001534991.1|31483_32119_+	type-F conjugative transfer system protein TraW	NA	NA	NA	NA	NA
WP_004558357.1|32115_33111_+	conjugal transfer pilus assembly protein TraU	NA	NA	NA	NA	NA
WP_004558351.1|33121_33490_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043991289.1|33486_34101_+	type-F conjugative transfer system pilin assembly protein TrbC	NA	NA	NA	NA	NA
WP_004558349.1|34097_35951_+	type-F conjugative transfer system mating-pair stabilization protein TraN	NA	NA	NA	NA	NA
WP_004558353.1|35947_36727_+	type-F conjugative transfer system pilin assembly protein TraF	NA	NA	NA	NA	NA
WP_001808377.1|36748_37342_+	type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB	NA	NA	NA	NA	NA
WP_001808382.1|37341_38703_+	F-type conjugal transfer protein TraH	NA	NA	NA	NA	NA
WP_043991291.1|38704_41602_+	conjugal transfer mating pair stabilization protein TraG	NA	NA	NA	NA	NA
WP_000081842.1|41995_43198_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	71.5	4.4e-77
WP_000682256.1|43652_44390_+	complement resistance protein TraT	NA	NA	NA	NA	NA
WP_077945141.1|44540_47378_+	type IV conjugative transfer system coupling protein TraD	NA	NA	NA	NA	NA
WP_000493830.1|47396_47963_+	DUF2726 domain-containing protein	NA	NA	NA	NA	NA
WP_001068034.1|47959_48691_+	type-F conjugative transfer system pilin acetylase TraX	NA	A0A077JBM8	Xanthomonas_phage	38.1	1.6e-05
WP_001576653.1|49543_49810_+	replication regulatory protein RepA	NA	NA	NA	NA	NA
WP_001541552.1|50059_50137_+	RepA leader peptide Tap	NA	NA	NA	NA	NA
WP_015633268.1|50117_50999_+	incFII family plasmid replication initiator RepA	NA	NA	NA	NA	NA
WP_001808376.1|52042_52768_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000031011.1|53049_53355_+	hypothetical protein	NA	A0A0K1LL53	Rhodobacter_phage	49.5	9.3e-16
WP_001064756.1|53555_53783_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001004831.1|53859_54111_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000792037.1|54100_54316_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001247111.1|55282_56251_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_138009944.1|56309_56594_-|transposase	transposase	transposase	S5FM71	Shigella_phage	60.3	3.2e-10
WP_015633273.1|56648_57272_-|transposase	IS4 family transposase	transposase	S5FM71	Shigella_phage	62.1	1.7e-72
>prophage 2
NZ_LN890521	Salmonella enterica subsp. enterica serovar Weltevreden strain 2511STDY5462413 plasmid 2, complete sequence	98776	70524	92220	98776		Tupanvirus(83.33%)	10	NA	NA
WP_071828170.1|70524_78711_-	non-ribosomal peptide synthetase	NA	A0A2K9L3I8	Tupanvirus	32.2	4.0e-81
WP_077945230.1|78853_79132_-	hypothetical protein	NA	NA	NA	NA	NA
WP_057517225.1|79133_79448_-	hypothetical protein	NA	NA	NA	NA	NA
WP_071828177.1|79521_79752_-	hypothetical protein	NA	D0R7J2	Paenibacillus_phage	40.6	5.9e-07
WP_071828179.1|79715_79913_-	hypothetical protein	NA	NA	NA	NA	NA
WP_057517226.1|79881_81156_-	AMP-binding protein	NA	A0A2K9L3I8	Tupanvirus	38.0	1.3e-34
WP_057517227.1|81121_82513_-	AMP-binding protein	NA	A0A2K9L3I8	Tupanvirus	31.3	5.3e-34
WP_057517228.1|82509_83838_-	hypothetical protein	NA	NA	NA	NA	NA
WP_057517229.1|83837_84437_-	hypothetical protein	NA	A0A2K9L3I8	Tupanvirus	33.3	1.8e-18
WP_057517230.1|84411_92220_-	amino acid adenylation domain-containing protein	NA	A0A2K9KZV5	Tupanvirus	28.6	6.0e-191
