assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001305575.2_ASM130557v2	NZ_CP012373	Beggiatoa leptomitoformis strain D-402 chromosome, complete genome	1	552053-552289	1,1,1	CRT,PILER-CR,CRISPRCasFinder	no		DEDDh,cas3,cas10,csa3,RT	Orphan	GTTTCAATCGCCTGCATTGGCGAGTAAGGCTGCAAC,GTTTCAATCGCCTGCATTGGCGAGTAAGGCTGCAAC,TTTCAATCGCCTGCATTGGCGAGTAAGGCTGCAAC	36,36,35	0	0	NA	NA	NA:NA:NA	3,3,3	3	Orphan	DEDDh,cas3,cas10,csa3,RT	NA|97aa|up_9|NZ_CP012373.1_547120_547411_-,NA|64aa|up_8|NZ_CP012373.1_547667_547859_+,NA|62aa|up_7|NZ_CP012373.1_548080_548266_-,NA|159aa|up_6|NZ_CP012373.1_548294_548771_-,NA|79aa|up_4|NZ_CP012373.1_549649_549886_-,NA|73aa|up_0|NZ_CP012373.1_551542_551761_-,NA	NA|97aa|up_9|NZ_CP012373.1_547120_547411_-	NA	NA|64aa|up_8|NZ_CP012373.1_547667_547859_+	NA	NA|62aa|up_7|NZ_CP012373.1_548080_548266_-	NA	NA|159aa|up_6|NZ_CP012373.1_548294_548771_-	NA	NA|250aa|up_5|NZ_CP012373.1_548824_549573_-	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|79aa|up_4|NZ_CP012373.1_549649_549886_-	NA	NA|120aa|up_3|NZ_CP012373.1_550129_550489_+	pfam07022, Phage_CI_repr, Bacteriophage CI repressor helix-turn-helix domain	NA|68aa|up_2|NZ_CP012373.1_550523_550727_+	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General    function prediction only]	NA|73aa|up_1|NZ_CP012373.1_550726_550945_+	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,	NA|73aa|up_0|NZ_CP012373.1_551542_551761_-	NA	NA|402aa|down_0|NZ_CP012373.1_553077_554283_+	cd08560, GDPD_EcGlpQ_like_1, Glycerophosphodiester phosphodiesterase domain similar to Escherichia coli periplasmic phosphodiesterase (GlpQ) include uncharacterized proteins	NA|384aa|down_1|NZ_CP012373.1_554480_555632_+	PRK00025, lpxB, lipid-A-disaccharide synthase; Reviewed	NA|186aa|down_2|NZ_CP012373.1_555615_556173_+	COG1036, COG1036, Archaeal flavoproteins [Energy production and conversion]	NA|116aa|down_3|NZ_CP012373.1_556254_556602_-	PRK13386, fliH, flagellar assembly protein H; Provisional	NA|356aa|down_4|NZ_CP012373.1_556658_557726_-	pfam04754, Transposase_31, Putative transposase, YhgA-like	NA|157aa|down_5|NZ_CP012373.1_557793_558264_-	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional	NA|376aa|down_6|NZ_CP012373.1_558260_559388_-	PRK14019, PRK14019, bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA|1016aa|down_7|NZ_CP012373.1_559761_562809_+	COG2202, AtoS, FOG: PAS/PAC domain [Signal transduction mechanisms]	NA|219aa|down_8|NZ_CP012373.1_562864_563521_+	PRK13255, PRK13255, thiopurine S-methyltransferase; Reviewed	NA|128aa|down_9|NZ_CP012373.1_563684_564068_+	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed
GCF_001305575.2_ASM130557v2	NZ_CP012373	Beggiatoa leptomitoformis strain D-402 chromosome, complete genome	2	945611-945979	2	CRISPRCasFinder	no		DEDDh,cas3,cas10,csa3,RT	Orphan	AAATGGCGACCGCTACGAAGGCGA	24	0	0	NA	NA	NA	5	5	Orphan	DEDDh,cas3,cas10,csa3,RT	NA|313aa|up_9|NZ_CP012373.1_935766_936705_-,NA|162aa|up_8|NZ_CP012373.1_936706_937192_-,NA|122aa|down_3|NZ_CP012373.1_954150_954516_+,NA|1689aa|down_7|NZ_CP012373.1_958174_963241_-	NA|313aa|up_9|NZ_CP012373.1_935766_936705_-	NA	NA|162aa|up_8|NZ_CP012373.1_936706_937192_-	NA	NA|409aa|up_7|NZ_CP012373.1_937460_938687_+	cd15482, Sialidase_non-viral, Non-viral sialidases	NA|233aa|up_6|NZ_CP012373.1_938987_939686_-	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|336aa|up_5|NZ_CP012373.1_939809_940817_-	PRK09283, PRK09283, porphobilinogen synthase	NA|147aa|up_4|NZ_CP012373.1_941105_941546_-	cd01522, RHOD_1, Member of the Rhodanese Homology Domain superfamily, subgroup 1	NA|152aa|up_3|NZ_CP012373.1_941730_942186_-	COG1585, COG1585, Membrane protein implicated in regulation of membrane protease activity [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]	NA|299aa|up_2|NZ_CP012373.1_942189_943086_-	COG0330, HflC, Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones]	NA|254aa|up_1|NZ_CP012373.1_943393_944155_+	PRK10696, PRK10696, tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional	NA|207aa|up_0|NZ_CP012373.1_944239_944860_+	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p	NA|316aa|down_0|NZ_CP012373.1_946092_947040_+	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|1665aa|down_1|NZ_CP012373.1_947346_952341_+	TIGR01530, Probable_5'-nucleotidase, NAD pyrophosphatase/5'-nucleotidase NadN	NA|461aa|down_2|NZ_CP012373.1_952476_953859_-	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|122aa|down_3|NZ_CP012373.1_954150_954516_+	NA	NA|363aa|down_4|NZ_CP012373.1_954520_955609_+	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|258aa|down_5|NZ_CP012373.1_955633_956407_+	cd13703, PBP2_HisJ_LAO, Substrate binding domain of ABC-type histidine- and lysine/arginine/ornithine transporters; the type 2 periplasmic-binding protein fold	NA|456aa|down_6|NZ_CP012373.1_956620_957988_+	PRK03803, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional	NA|1689aa|down_7|NZ_CP012373.1_958174_963241_-	NA	NA|225aa|down_8|NZ_CP012373.1_963450_964125_-	TIGR02977, phage_shock_protein_A, phage shock protein A	NA|313aa|down_9|NZ_CP012373.1_964590_965529_+	COG0700, SpmB, Uncharacterized membrane protein [Function unknown]
GCF_001305575.2_ASM130557v2	NZ_CP012373	Beggiatoa leptomitoformis strain D-402 chromosome, complete genome	3	1966217-1966399	2,3	PILER-CR,CRISPRCasFinder	no	csa3	DEDDh,cas3,cas10,csa3,RT	Type I-A	TCGTTTCAATCGCCTGCATTGGCGAACCGGCTGTTAAC,TTTCAATCGCCTGCATTGGCGAACCGGCTGTTAAC	38,35	0	0	NA	NA	NA:NA	2,2	2	Orphan	DEDDh,cas3,cas10,csa3,RT	NA|440aa|up_7|NZ_CP012373.1_1951827_1953147_-,NA|102aa|down_5|NZ_CP012373.1_1972054_1972360_-	NA|1266aa|up_9|NZ_CP012373.1_1947076_1950874_+	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|307aa|up_8|NZ_CP012373.1_1950884_1951805_+	PRK05692, PRK05692, hydroxymethylglutaryl-CoA lyase; Provisional	NA|440aa|up_7|NZ_CP012373.1_1951827_1953147_-	NA	NA|348aa|up_6|NZ_CP012373.1_1953671_1954715_+	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|205aa|up_5|NZ_CP012373.1_1954714_1955329_+	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed	NA|208aa|up_4|NZ_CP012373.1_1955522_1956146_+	pfam01227, GTP_cyclohydroI, GTP cyclohydrolase I	NA|2156aa|up_3|NZ_CP012373.1_1956352_1962820_+	COG2374, COG2374, Predicted extracellular nuclease [General function prediction only]	NA|344aa|up_2|NZ_CP012373.1_1962896_1963928_-	PRK04204, PRK04204, RNA 3'-terminal phosphate cyclase	NA|236aa|up_1|NZ_CP012373.1_1964064_1964772_+	pfam11306, DUF3108, Protein of unknown function (DUF3108)	NA|436aa|up_0|NZ_CP012373.1_1964775_1966083_+	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]	NA|432aa|down_0|NZ_CP012373.1_1966832_1968128_-	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional	NA|391aa|down_1|NZ_CP012373.1_1968325_1969498_-	PRK12421, PRK12421, ATP phosphoribosyltransferase regulatory subunit; Provisional	NA|62aa|down_2|NZ_CP012373.1_1969497_1969683_-	pfam09838, DUF2065, Uncharacterized protein conserved in bacteria (DUF2065)	NA|295aa|down_3|NZ_CP012373.1_1969816_1970701_-	cd03405, SPFH_HflC, High frequency of lysogenization C (HflC) family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|401aa|down_4|NZ_CP012373.1_1970700_1971903_-	cd03404, SPFH_HflK, High frequency of lysogenization K (HflK) family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|102aa|down_5|NZ_CP012373.1_1972054_1972360_-	NA	NA|72aa|down_6|NZ_CP012373.1_1972473_1972689_-	TIGR01914, CRISPR-associated_protein_Cas8a2/Csa4, CRISPR-associated protein Cas8a2/Csa4, subtype I-A/APERN	NA|435aa|down_7|NZ_CP012373.1_1973017_1974322_-	TIGR03156, GTP_HflX, GTP-binding protein HflX	NA|82aa|down_8|NZ_CP012373.1_1974408_1974654_-	PRK00395, hfq, RNA-binding protein Hfq; Provisional	NA|320aa|down_9|NZ_CP012373.1_1974726_1975686_-	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
GCF_001305575.2_ASM130557v2	NZ_CP012373	Beggiatoa leptomitoformis strain D-402 chromosome, complete genome	4	2230950-2231105	4	CRISPRCasFinder	no		DEDDh,cas3,cas10,csa3,RT	Orphan	TTGAGCGGTTGTTAGTTCGGCTTGAACAGT	30	0	0	NA	NA	NA	2	2	Orphan	DEDDh,cas3,cas10,csa3,RT	NA|272aa|up_5|NZ_CP012373.1_2220362_2221178_-,NA|873aa|up_3|NZ_CP012373.1_2224367_2226986_+,NA|574aa|down_0|NZ_CP012373.1_2232061_2233783_-,NA|303aa|down_1|NZ_CP012373.1_2233784_2234693_-,NA|264aa|down_2|NZ_CP012373.1_2234692_2235484_-,NA|108aa|down_5|NZ_CP012373.1_2244265_2244589_-,NA|383aa|down_6|NZ_CP012373.1_2244623_2245772_-,NA|297aa|down_7|NZ_CP012373.1_2245774_2246665_-,NA|118aa|down_8|NZ_CP012373.1_2246633_2246987_-,NA|266aa|down_9|NZ_CP012373.1_2246990_2247788_-	NA|1227aa|up_9|NZ_CP012373.1_2214464_2218145_-	PRK13560, PRK13560, hypothetical protein; Provisional	NA|131aa|up_8|NZ_CP012373.1_2218354_2218747_-	COG3012, COG3012, Uncharacterized protein conserved in bacteria [Function unknown]	NA|261aa|up_7|NZ_CP012373.1_2218746_2219529_-	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|271aa|up_6|NZ_CP012373.1_2219546_2220359_-	COG1127, Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|272aa|up_5|NZ_CP012373.1_2220362_2221178_-	NA	NA|904aa|up_4|NZ_CP012373.1_2221257_2223969_-	PRK15347, PRK15347, two component system sensor kinase	NA|873aa|up_3|NZ_CP012373.1_2224367_2226986_+	NA	NA|636aa|up_2|NZ_CP012373.1_2227189_2229097_+	cd07340, M48B_Htpx_like, Peptidase M48 subfamily B HtpX-like membrane-bound metallopeptidase	NA|181aa|up_1|NZ_CP012373.1_2229159_2229702_+	PRK05456, PRK05456, ATP-dependent protease subunit HslV	NA|222aa|up_0|NZ_CP012373.1_2229873_2230539_-	pfam03781, FGE-sulfatase, Sulfatase-modifying factor enzyme 1	NA|574aa|down_0|NZ_CP012373.1_2232061_2233783_-	NA	NA|303aa|down_1|NZ_CP012373.1_2233784_2234693_-	NA	NA|264aa|down_2|NZ_CP012373.1_2234692_2235484_-	NA	NA|2812aa|down_3|NZ_CP012373.1_2235483_2243919_-	TIGR02675, Mu-like_prophage_FluMu_protein_gp42, tape measure domain	NA|120aa|down_4|NZ_CP012373.1_2243925_2244285_-	pfam08809, DUF1799, Phage related hypothetical protein (DUF1799)	NA|108aa|down_5|NZ_CP012373.1_2244265_2244589_-	NA	NA|383aa|down_6|NZ_CP012373.1_2244623_2245772_-	NA	NA|297aa|down_7|NZ_CP012373.1_2245774_2246665_-	NA	NA|118aa|down_8|NZ_CP012373.1_2246633_2246987_-	NA	NA|266aa|down_9|NZ_CP012373.1_2246990_2247788_-	NA
GCF_001305575.2_ASM130557v2	NZ_CP012373	Beggiatoa leptomitoformis strain D-402 chromosome, complete genome	5	3241960-3242143	5	CRISPRCasFinder	no		DEDDh,cas3,cas10,csa3,RT	Orphan	TATTATTAGATTTACAAGGAAATGA	25	0	0	NA	NA	NA	2	2	Orphan	DEDDh,cas3,cas10,csa3,RT	NA|116aa|up_2|NZ_CP012373.1_3233961_3234309_+,NA	NA|326aa|up_9|NZ_CP012373.1_3225713_3226691_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|434aa|up_8|NZ_CP012373.1_3226842_3228144_+	pfam07452, CHRD, CHRD domain	NA|262aa|up_7|NZ_CP012373.1_3228395_3229181_+	COG3176, COG3176, Putative hemolysin [General function prediction only]	NA|241aa|up_6|NZ_CP012373.1_3229305_3230028_+	PRK09065, PRK09065, glutamine amidotransferase; Provisional	NA|86aa|up_5|NZ_CP012373.1_3230071_3230329_-	smart00834, CxxC_CXXC_SSSS, Putative regulatory protein	NA|600aa|up_4|NZ_CP012373.1_3230458_3232258_-	PRK00476, aspS, aspartyl-tRNA synthetase; Validated	NA|382aa|up_3|NZ_CP012373.1_3232774_3233920_+	pfam10129, OpgC_C, OpgC protein	NA|116aa|up_2|NZ_CP012373.1_3233961_3234309_+	NA	NA|1604aa|up_1|NZ_CP012373.1_3234319_3239131_+	pfam12770, CHAT, CHAT domain	NA|409aa|up_0|NZ_CP012373.1_3239160_3240387_+	cd13126, MATE_like_11, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins	NA|655aa|down_0|NZ_CP012373.1_3242903_3244868_-	PRK10788, PRK10788, periplasmic folding chaperone; Provisional	NA|213aa|down_1|NZ_CP012373.1_3244894_3245533_-	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others	NA|91aa|down_2|NZ_CP012373.1_3245913_3246186_-	cd13831, HU, histone-like DNA-binding protein HU	NA|815aa|down_3|NZ_CP012373.1_3246328_3248773_-	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]	NA|428aa|down_4|NZ_CP012373.1_3248903_3250187_-	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX	NA|214aa|down_5|NZ_CP012373.1_3250251_3250893_-	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|440aa|down_6|NZ_CP012373.1_3250903_3252223_-	PRK01490, tig, trigger factor; Provisional	NA|347aa|down_7|NZ_CP012373.1_3252886_3253927_+	PRK10964, PRK10964, lipopolysaccharide heptosyltransferase RfaC	NA|296aa|down_8|NZ_CP012373.1_3253923_3254811_+	pfam02585, PIG-L, GlcNAc-PI de-N-acetylase	NA|374aa|down_9|NZ_CP012373.1_3254796_3255918_-	PRK00742, PRK00742, chemotaxis-specific protein-glutamate methyltransferase CheB
GCF_001305575.2_ASM130557v2	NZ_CP012373	Beggiatoa leptomitoformis strain D-402 chromosome, complete genome	6	3500127-3500706	3,2,6	PILER-CR,CRT,CRISPRCasFinder	no		DEDDh,cas3,cas10,csa3,RT	Orphan	GTTTCAATCGCCTGCATTGGCGTGTAAGGCTGCAAC,GTTGCAGCCTTACACGCCAATGCAGGCGATTGAAAC,ACGCCAATGCAGGCGATTGAAAC	36,36,23	0	0	NA	NA	NA:NA:NA	8,8,8	8	Orphan	DEDDh,cas3,cas10,csa3,RT	NA|212aa|up_9|NZ_CP012373.1_3484099_3484735_-,NA	NA|212aa|up_9|NZ_CP012373.1_3484099_3484735_-	NA	NA|198aa|up_8|NZ_CP012373.1_3484737_3485331_-	cd17554, REC_TrrA-like, phosphoacceptor receiver (REC) domain of Thermotoga maritima response regulator TrrA and similar domains	NA|707aa|up_7|NZ_CP012373.1_3485327_3487448_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|250aa|up_6|NZ_CP012373.1_3487863_3488612_-	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|249aa|up_5|NZ_CP012373.1_3488716_3489462_-	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|113aa|up_4|NZ_CP012373.1_3490936_3491275_-	TIGR04265, bac_cardiolipin, cardiolipin synthase	NA|127aa|up_3|NZ_CP012373.1_3491728_3492109_-	cd06154, YjgF_YER057c_UK114_like_6, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function	NA|954aa|up_2|NZ_CP012373.1_3492403_3495265_+	pfam05860, Haemagg_act, haemagglutination activity domain	NA|267aa|up_1|NZ_CP012373.1_3495488_3496289_-	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase)	NA|1092aa|up_0|NZ_CP012373.1_3496556_3499832_+	cd03678, MM_CoA_mutase_1, Coenzyme B12-dependent-methylmalonyl coenzyme A (CoA) mutase (MCM) family, unknown subfamily 1; composed of uncharacterized bacterial proteins containing a C-terminal MCM domain	NA|1045aa|down_0|NZ_CP012373.1_3500891_3504026_-	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional	NA|368aa|down_1|NZ_CP012373.1_3504438_3505542_+	COG1485, COG1485, Predicted ATPase [General function prediction only]	NA|1366aa|down_2|NZ_CP012373.1_3505657_3509755_+	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|216aa|down_3|NZ_CP012373.1_3509874_3510522_+	COG2863, COG2863, Cytochrome c553 [Energy production and conversion]	NA|122aa|down_4|NZ_CP012373.1_3510720_3511086_+	pfam01710, HTH_Tnp_IS630, Transposase	NA|157aa|down_5|NZ_CP012373.1_3511072_3511543_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|937aa|down_6|NZ_CP012373.1_3511630_3514441_-	pfam00311, PEPcase, Phosphoenolpyruvate carboxylase	NA|196aa|down_7|NZ_CP012373.1_3514730_3515318_+	pfam01694, Rhomboid, Rhomboid family	NA|537aa|down_8|NZ_CP012373.1_3515579_3517190_+	COG3261, HycE, Ni,Fe-hydrogenase III large subunit [Energy production and conversion]	NA|369aa|down_9|NZ_CP012373.1_3517208_3518315_-	cd13589, PBP2_polyamine_RpCGA009, The periplasmic-binding component of an uncharacterized ABC transport system from Rhodopseudomonas palustris CGA009 and related proteins; contains the type 2 periplasmic-binding fold
GCF_001305575.2_ASM130557v2	NZ_CP012373	Beggiatoa leptomitoformis strain D-402 chromosome, complete genome	7	3708841-3708935	7	CRISPRCasFinder	no		DEDDh,cas3,cas10,csa3,RT	Orphan	GGCGTTGAAAAGGGTTTACAACT	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,cas10,csa3,RT	NA|218aa|up_4|NZ_CP012373.1_3704024_3704678_-,NA	NA|738aa|up_9|NZ_CP012373.1_3698332_3700546_-	PRK04423, PRK04423, LPS-assembly protein LptD	NA|218aa|up_8|NZ_CP012373.1_3700899_3701553_+	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|257aa|up_7|NZ_CP012373.1_3701700_3702471_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|326aa|up_6|NZ_CP012373.1_3702527_3703505_+	cd05286, QOR2, Quinone oxidoreductase (QOR)	NA|123aa|up_5|NZ_CP012373.1_3703651_3704020_+	PRK10203, PRK10203, hypothetical protein; Provisional	NA|218aa|up_4|NZ_CP012373.1_3704024_3704678_-	NA	NA|417aa|up_3|NZ_CP012373.1_3704764_3706015_-	TIGR01709, Type_II_secretion_system_protein_L, type II secretion system protein L	NA|250aa|up_2|NZ_CP012373.1_3706033_3706782_-	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|107aa|up_1|NZ_CP012373.1_3707276_3707597_+	TIGR02011, Protein_yfhF	NA|174aa|up_0|NZ_CP012373.1_3707600_3708122_+	PRK05014, hscB, co-chaperone HscB; Provisional	NA|628aa|down_0|NZ_CP012373.1_3709148_3711032_+	PRK05183, hscA, chaperone protein HscA; Provisional	NA|113aa|down_1|NZ_CP012373.1_3711031_3711370_+	TIGR02007, 2Fe-2S_ferredoxin, ferredoxin, 2Fe-2S type, ISC system	NA|329aa|down_2|NZ_CP012373.1_3711392_3712379_-	cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase	NA|348aa|down_3|NZ_CP012373.1_3713013_3714057_+	COG3706, PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms]	NA|319aa|down_4|NZ_CP012373.1_3714053_3715010_-	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|177aa|down_5|NZ_CP012373.1_3715162_3715693_-	COG4337, COG4337, Uncharacterized protein conserved in bacteria [Function unknown]	NA|543aa|down_6|NZ_CP012373.1_3715903_3717532_+	pfam12034, DUF3520, Domain of unknown function (DUF3520)	NA|347aa|down_7|NZ_CP012373.1_3717652_3718693_+	cd06854, GT_WbpL_WbcO_like, The members of this subfamily catalyze the formation of a phosphodiester bond between a membrane-associated undecaprenyl-phosphate (Und-P) molecule and N-acetylhexosamine 1-phosphate, which is usually donated by a soluble UDP-N-acetylhexosamine precursor	NA|257aa|down_8|NZ_CP012373.1_3718678_3719449_-	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|128aa|down_9|NZ_CP012373.1_3719583_3719967_+	pfam13451, zf-trcl, Probable zinc-ribbon domain
