The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP009557	Clostridium perfringens strain FORC_003, complete genome	3338532	849828	862426	3338532		Synechococcus_phage(25.0%)	9	NA	NA
WP_049039980.1|849828_850479_+	aminotransferase	NA	A0A1B1P8C0	Bacillus_phage	30.6	2.9e-14
WP_025648770.1|850980_852291_+	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA	NA
WP_049039979.1|852528_856329_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	24.6	2.8e-32
WP_049039977.1|856650_857130_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	46.8	2.6e-28
WP_003456948.1|857129_857837_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4SM18	Cyanophage	43.8	2.8e-47
WP_011009969.1|857858_859304_+	amidophosphoribosyltransferase	NA	A0A1B1ISH6	uncultured_Mediterranean_phage	33.0	1.4e-56
WP_011009970.1|859304_860306_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3FGG1	Synechococcus_phage	49.0	3.9e-71
WP_011009971.1|860293_860908_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.1	2.7e-22
WP_003468499.1|860920_862426_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	1.2e-66
>prophage 2
NZ_CP009557	Clostridium perfringens strain FORC_003, complete genome	3338532	1427052	1444970	3338532	tRNA,portal,terminase,protease,head,capsid,tail	Clostridium_phage(37.5%)	20	NA	NA
WP_003448449.1|1427052_1427787_-|tRNA	tRNA 2-thiocytidine biosynthesis protein TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	35.8	9.7e-35
WP_060670240.1|1427993_1428740_+|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_049039165.1|1428806_1429874_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_011010158.1|1430074_1430785_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_060670242.1|1430840_1431752_-	radical SAM protein	NA	NA	NA	NA	NA
WP_060670244.1|1431895_1432870_+	M42 family metallopeptidase	NA	NA	NA	NA	NA
WP_060670246.1|1433061_1434666_+	hypothetical protein	NA	A0A1S5SA14	Streptococcus_phage	26.8	5.4e-30
WP_060670248.1|1434881_1435073_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060670251.1|1435277_1435964_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_060670252.1|1436012_1436318_+	hypothetical protein	NA	I2E8X0	Clostridium_phage	72.1	1.9e-16
WP_060670253.1|1436391_1437012_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060670254.1|1437018_1437471_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060670255.1|1437687_1438143_+	HNH endonuclease	NA	A0A2K9VBV6	Staphylococcus_phage	40.2	9.3e-12
WP_060670256.1|1438480_1438972_+|terminase	phage terminase small subunit P27 family	terminase	Q8SBQ3	Clostridium_phage	33.8	5.9e-12
WP_081006711.1|1439028_1440735_+|terminase	terminase large subunit	terminase	A0A0A7RUM0	Clostridium_phage	34.6	1.7e-74
WP_060670259.1|1440803_1442129_+|portal	phage portal protein	portal	K4ID36	Lactobacillus_phage	31.3	2.4e-36
WP_155468433.1|1442178_1442319_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060670261.1|1442371_1443097_+|head,protease	HK97 family phage prohead protease	head,protease	A0A0S2SXJ4	Bacillus_phage	30.0	1.6e-05
WP_060670263.1|1443358_1444474_+|capsid	phage major capsid protein	capsid	NA	NA	NA	NA
WP_060670266.1|1444673_1444970_+|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
>prophage 3
NZ_CP009557	Clostridium perfringens strain FORC_003, complete genome	3338532	2009226	2021006	3338532	tRNA	Clostridium_phage(22.22%)	10	NA	NA
WP_003457168.1|2009226_2010264_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	36.0	5.4e-31
WP_003457240.1|2010838_2011342_-	QueT transporter family protein	NA	E7DN70	Pneumococcus_phage	37.2	1.1e-13
WP_003457231.1|2011666_2012542_-	MBL fold metallo-hydrolase	NA	Q332C0	Clostridium_botulinum_C_phage	50.2	1.1e-64
WP_011590863.1|2012712_2014035_-	sensor histidine kinase	NA	X5JAC0	Clostridium_phage	37.8	3.6e-72
WP_003449818.1|2014028_2014739_-	response regulator transcription factor	NA	A0A2R2ZGH8	Clostridioides_phage	31.8	3.3e-32
WP_060670591.1|2014877_2015891_-	N-acetylmuramoyl-L-alanine amidase	NA	Q8SBN4	Clostridium_phage	64.8	2.2e-122
WP_003468317.1|2015987_2016275_-	thiamine-binding protein	NA	NA	NA	NA	NA
WP_003465545.1|2016498_2017512_-	DUF348 domain-containing protein	NA	A0A143FMI2	Bacillus_phage	52.0	3.5e-19
WP_003451999.1|2017937_2019236_-	uracil permease	NA	Q9KX94	Enterobacteria_phage	39.3	3.6e-69
WP_003456099.1|2019422_2021006_+	ATP-binding cassette domain-containing protein	NA	A0A1V0SGN0	Hokovirus	25.6	8.5e-44
>prophage 4
NZ_CP009557	Clostridium perfringens strain FORC_003, complete genome	3338532	2325780	2385919	3338532	portal,tRNA,terminase,integrase,head,holin,tail	Clostridium_phage(68.42%)	66	2338359:2338375	2377653:2377669
WP_003466255.1|2325780_2328420_-|tRNA	alanine--tRNA ligase	tRNA	A0A2K9L3D8	Tupanvirus	33.3	3.6e-63
WP_003466258.1|2329012_2330050_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_003451141.1|2330075_2330549_-	photosystem reaction center subunit H	NA	NA	NA	NA	NA
WP_003451577.1|2330837_2331917_-|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_085952194.1|2331941_2332367_-	Fe-S cluster assembly scaffold protein NifU	NA	A0A2H4N7M4	Lake_Baikal_phage	56.1	7.5e-32
WP_003451075.1|2332372_2333569_-	cysteine desulfurase NifS	NA	A0A0H3TPH2	Faustovirus	28.3	1.3e-36
WP_003451273.1|2333561_2334023_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_042259059.1|2334152_2335379_-	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	41.9	1.5e-88
WP_060670748.1|2335601_2336501_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_003451425.1|2336686_2337115_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_003465271.1|2337117_2338113_-	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_003451258.1|2338192_2339206_-	molybdopterin-binding protein	NA	NA	NA	NA	NA
2338359:2338375	attL	ATTCCTATAATAGGAAC	NA	NA	NA	NA
WP_003451224.1|2339324_2339921_-	molybdenum cofactor guanylyltransferase	NA	NA	NA	NA	NA
WP_003451621.1|2339964_2341185_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_003451443.1|2341523_2342006_-	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
WP_003451275.1|2342096_2343320_-	nitrate reductase subunit beta	NA	NA	NA	NA	NA
WP_003451093.1|2343321_2343735_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA	NA
WP_003465189.1|2343747_2345826_-	nitrate reductase	NA	NA	NA	NA	NA
WP_003465229.1|2345958_2346387_-	hypothetical protein	NA	NA	NA	NA	NA
WP_155468437.1|2346608_2347136_-	glucose-inhibited division protein A	NA	NA	NA	NA	NA
WP_081006719.1|2347103_2347376_+	helix-turn-helix transcriptional regulator	NA	M9Q2G2	Clostridium_phage	71.6	2.7e-27
WP_060670752.1|2347437_2347977_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060670755.1|2348315_2349338_-	SH3 domain-containing protein	NA	Q0SPG7	Clostridium_phage	54.7	1.1e-89
WP_060670757.1|2349428_2349845_-	hypothetical protein	NA	M9Q2G0	Clostridium_phage	90.6	2.4e-59
WP_003460274.1|2349885_2350302_-|holin	phage holin family protein	holin	M9Q253	Clostridium_phage	99.3	4.0e-70
WP_060670759.1|2350319_2350616_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060670761.1|2350629_2356584_-	hypothetical protein	NA	H7BVF2	unidentified_phage	45.6	3.7e-68
WP_003477343.1|2356610_2356991_-	DUF1617 family protein	NA	M9Q2L1	Clostridium_phage	92.9	7.6e-60
WP_060670763.1|2357055_2357349_-	hypothetical protein	NA	Q0SPL4	Clostridium_phage	78.4	8.9e-32
WP_060670765.1|2357379_2358075_-|tail	phage tail protein	tail	Q0SPL3	Clostridium_phage	37.6	9.5e-32
WP_060670767.1|2358074_2361635_-|tail	phage tail tape measure protein	tail	Q0SPL2	Clostridium_phage	79.1	7.3e-144
WP_060670769.1|2361634_2361937_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003477335.1|2361918_2362260_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060670771.1|2362274_2362802_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060670773.1|2363189_2363603_-	hypothetical protein	NA	A0A0S2MVE4	Bacillus_phage	39.6	1.9e-08
WP_060670775.1|2363592_2363907_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060670777.1|2363919_2364222_-	hypothetical protein	NA	H9A0N4	Staphylococcus_phage	38.5	9.5e-05
WP_060670778.1|2364266_2365088_-	hypothetical protein	NA	A0A0A7AQF5	Bacillus_phage	56.4	9.3e-79
WP_060670780.1|2365104_2365710_-	hypothetical protein	NA	A0A0A8WEG1	Clostridium_phage	38.9	5.9e-22
WP_060670782.1|2365841_2366234_-	hypothetical protein	NA	A0A2H4J4N9	uncultured_Caudovirales_phage	60.0	2.2e-33
WP_060670784.1|2366233_2366440_-	hypothetical protein	NA	M9Q2K8	Clostridium_phage	97.1	8.7e-34
WP_155468439.1|2366442_2366592_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060670786.1|2366597_2366897_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060670788.1|2366908_2367673_-|head	phage head morphogenesis protein	head	A0A1X9I5V1	Streptococcus_phage	30.0	2.6e-14
WP_060670790.1|2367662_2369102_-|portal	phage portal protein	portal	A0A0A7S074	Clostridium_phage	43.3	3.7e-107
WP_003465304.1|2369115_2370399_-|terminase	PBSX family phage terminase large subunit	terminase	A0A2P1JTW5	Anoxybacillus_phage	62.8	2.4e-137
WP_060670792.1|2370385_2371144_-	hypothetical protein	NA	M9Q2K7	Clostridium_phage	62.2	1.6e-72
WP_060670794.1|2371189_2371753_-	recombinase family protein	NA	M9Q1K0	Clostridium_phage	93.5	7.8e-93
WP_060670797.1|2372235_2372895_-|integrase	tyrosine-type recombinase/integrase	integrase	M9Q2H0	Clostridium_phage	99.5	3.6e-121
WP_081006720.1|2373993_2374590_-	hypothetical protein	NA	M9Q2G8	Clostridium_phage	100.0	1.6e-51
WP_060670800.1|2374598_2374874_-	helix-turn-helix transcriptional regulator	NA	M9Q2I9	Clostridium_phage	98.9	1.4e-42
WP_060670802.1|2374951_2375185_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060670804.1|2375193_2375514_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060670805.1|2375525_2375948_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060670807.1|2375944_2376256_-	hypothetical protein	NA	M9Q2L5	Clostridium_phage	97.0	1.8e-46
WP_078209837.1|2376315_2377053_-	MerR family transcriptional regulator	NA	M9Q1J4	Clostridium_phage	98.8	1.9e-139
WP_060670809.1|2377024_2377846_-	hypothetical protein	NA	M9Q2G6	Clostridium_phage	85.3	8.9e-130
2377653:2377669	attR	GTTCCTATTATAGGAAT	NA	NA	NA	NA
WP_060670812.1|2378887_2379235_-	hypothetical protein	NA	A0A0A8WIJ9	Clostridium_phage	50.0	2.8e-08
WP_060670814.1|2379249_2379429_-	hypothetical protein	NA	M9Q2G4	Clostridium_phage	98.3	2.7e-23
WP_003465224.1|2379527_2379734_-	hypothetical protein	NA	M9Q257	Clostridium_phage	100.0	5.8e-30
WP_060670816.1|2379911_2380106_-	helix-turn-helix transcriptional regulator	NA	M9Q2I7	Clostridium_phage	92.2	2.8e-26
WP_060670817.1|2380309_2380747_+	helix-turn-helix transcriptional regulator	NA	M9Q2L3	Clostridium_phage	78.6	5.3e-57
WP_060670820.1|2380846_2381275_+	ImmA/IrrE family metallo-endopeptidase	NA	M9Q1J0	Clostridium_phage	99.3	7.8e-77
WP_060670822.1|2381307_2383020_+	recombinase family protein	NA	M9Q2G2	Clostridium_phage	98.9	0.0e+00
WP_003463476.1|2383819_2384800_-	sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein	NA	NA	NA	NA	NA
WP_003451263.1|2385043_2385919_-	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	31.6	9.5e-21
>prophage 5
NZ_CP009557	Clostridium perfringens strain FORC_003, complete genome	3338532	2805412	2857245	3338532	transposase,protease,coat	Clostridium_phage(20.0%)	52	NA	NA
WP_003452270.1|2805412_2805943_+|protease	spore protease YyaC	protease	G3M9W0	Bacillus_virus	37.9	2.3e-17
WP_003452335.1|2805981_2807019_-	rod shape-determining protein	NA	NA	NA	NA	NA
WP_003452341.1|2807109_2807361_-	sporulation transcriptional regulator SpoIIID	NA	M9Q261	Clostridium_phage	58.7	2.4e-17
WP_003452401.1|2807434_2808205_-	M23 family metallopeptidase	NA	NA	NA	NA	NA
WP_003452365.1|2808321_2809344_-	stage II sporulation protein D	NA	Q2XU88	Pseudomonas_phage	34.5	1.3e-34
WP_003452362.1|2809455_2810721_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_003452436.1|2810743_2811388_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042260519.1|2811659_2812130_-|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.5	1.4e-18
WP_003452358.1|2812306_2812708_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA	NA
WP_003452277.1|2812723_2814121_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
WP_003452288.1|2814134_2814986_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
WP_003452357.1|2815050_2816559_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
WP_003452366.1|2816569_2817109_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA	NA
WP_003452454.1|2817111_2817591_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
WP_003452423.1|2817690_2817909_-	ATP synthase F0 subunit C	NA	NA	NA	NA	NA
WP_003452429.1|2817969_2818644_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
WP_003482158.1|2818709_2819066_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003452347.1|2819747_2820926_-	acetyl-CoA C-acetyltransferase	NA	NA	NA	NA	NA
WP_003452343.1|2821193_2822348_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	25.5	2.9e-25
WP_003452430.1|2822411_2823041_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_003457391.1|2823085_2823535_-	ribose 5-phosphate isomerase B	NA	NA	NA	NA	NA
WP_003452339.1|2823798_2824851_-	threonylcarbamoyl-AMP synthase	NA	A0A291ATS8	Pandoravirus	36.7	8.4e-48
WP_003452379.1|2824873_2825464_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003452315.1|2825542_2826625_-	peptide chain release factor 1	NA	NA	NA	NA	NA
WP_060671029.1|2826681_2828445_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_003452353.1|2828470_2829070_-	thymidine kinase	NA	A0A249XXF6	Clostridium_phage	48.7	6.6e-50
WP_003452406.1|2829225_2829432_+	50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_003468212.1|2829540_2830665_+	galactosyldiacylglycerol synthase	NA	NA	NA	NA	NA
WP_003452426.1|2830707_2832168_-	transcription termination factor Rho	NA	NA	NA	NA	NA
WP_003452392.1|2832432_2834040_-	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	53.4	8.0e-159
WP_003475611.1|2834380_2834800_-	DUF1934 domain-containing protein	NA	NA	NA	NA	NA
WP_060671030.1|2834822_2835803_-	queuosine synthesis	NA	NA	NA	NA	NA
WP_003470853.1|2835848_2836478_-	stage II sporulation protein R	NA	NA	NA	NA	NA
WP_003471015.1|2836546_2837413_-	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
WP_060671031.1|2837548_2840173_-	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_003452400.1|2840159_2840987_-	cyanophycinase	NA	NA	NA	NA	NA
WP_060671033.1|2841086_2842649_-	DUF3794 domain-containing protein	NA	NA	NA	NA	NA
WP_003462688.1|2843007_2843244_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003457364.1|2843406_2844288_-	sporulation peptidase YabG	NA	NA	NA	NA	NA
WP_003452387.1|2844491_2845496_-|coat	CotS family spore coat protein	coat	NA	NA	NA	NA
WP_060671035.1|2845604_2846732_+	glycosyltransferase family 4 protein	NA	B6EFC4	Stygiolobus_rod-shaped_virus	36.6	8.5e-06
WP_060671037.1|2846914_2847943_-|coat	CotS family spore coat protein	coat	NA	NA	NA	NA
WP_060671039.1|2847958_2848642_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003462727.1|2848649_2849657_-|coat	CotS family spore coat protein	coat	NA	NA	NA	NA
WP_060671041.1|2849785_2850931_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_003457337.1|2851157_2851688_-	Gx transporter family protein	NA	NA	NA	NA	NA
WP_011010829.1|2851880_2852252_-	NusG domain II-containing protein	NA	NA	NA	NA	NA
WP_060671044.1|2852392_2852836_+	FMN-binding protein	NA	NA	NA	NA	NA
WP_060671046.1|2852870_2853899_+	FAD:protein FMN transferase	NA	NA	NA	NA	NA
WP_060671047.1|2854023_2855148_-	ethanolamine utilization protein EutH	NA	NA	NA	NA	NA
WP_003462743.1|2855302_2855632_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_003452404.1|2855865_2857245_-|protease	trypsin-like serine protease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	29.0	5.1e-21
