assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001280925.1_ASM128092v1	NZ_CP012300	Klebsiella quasipneumoniae strain HKUOPLC chromosome, complete genome	1	149257-149368	1	CRISPRCasFinder	no	cas3	cas3,csa3,DEDDh,DinG,WYL,RT	Unclear	TCCCTGCTTGCGCTACGCTTAGCAGGGCTAC	31	0	0	NA	NA	NA	1	1	Unclear	cas3,csa3,DEDDh,DinG,WYL,RT	NA,NA	NA|241aa|up_9|NZ_CP012300.1_135494_136217_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|460aa|up_8|NZ_CP012300.1_136971_138351_-	cd05296, GH4_P_beta_glucosidase, Glycoside Hydrolases Family 4; Phospho-beta-glucosidase	NA|520aa|up_7|NZ_CP012300.1_138363_139923_-	TIGR02005, PTS-IIBC-alpha, PTS system, alpha-glucoside-specific IIBC component	NA|572aa|up_6|NZ_CP012300.1_140174_141890_-	pfam05170, AsmA, AsmA family	NA|464aa|up_5|NZ_CP012300.1_142040_143432_-	COG2233, UraA, Xanthine/uracil permeases [Nucleotide transport and metabolism]	NA|401aa|up_4|NZ_CP012300.1_143716_144919_+	TIGR00210, Sodium/glutamate_symport_carrier_protein, sodium--glutamate symport carrier (gltS)	NA|504aa|up_3|NZ_CP012300.1_145033_146545_-	PRK00047, glpK, glycerol kinase GlpK	NA|284aa|up_2|NZ_CP012300.1_146566_147418_-	cd00333, MIP, Major intrinsic protein (MIP) superfamily	NA|82aa|up_1|NZ_CP012300.1_147860_148106_+	PRK15422, PRK15422, septal ring assembly protein ZapB; Provisional	NA|330aa|up_0|NZ_CP012300.1_148258_149248_+	PRK10752, PRK10752, sulfate ABC transporter substrate-binding protein	NA|257aa|down_0|NZ_CP012300.1_149490_150261_+	PRK05471, PRK05471, CDP-diacylglycerol pyrophosphatase; Provisional	NA|435aa|down_1|NZ_CP012300.1_150325_151630_+	TIGR00785, Uncharacterized_transporter_HI_0020, anion transporter	NA|256aa|down_2|NZ_CP012300.1_151721_152489_-	PRK00042, tpiA, triosephosphate isomerase; Provisional	NA|200aa|down_3|NZ_CP012300.1_152598_153198_-	pfam07305, DUF1454, Protein of unknown function (DUF1454)	NA|143aa|down_4|NZ_CP012300.1_153310_153739_+	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|249aa|down_5|NZ_CP012300.1_153739_154486_-	PRK10926, PRK10926, ferredoxin-NADP reductase; Provisional	NA|337aa|down_6|NZ_CP012300.1_154636_155647_-	COG1494, GlpX, Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins [Carbohydrate transport and metabolism]	cas3|694aa|down_7|NZ_CP012300.1_155695_157777_-	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional	NA|230aa|down_8|NZ_CP012300.1_157782_158472_-	PRK11081, PRK11081, tRNA guanosine-2'-O-methyltransferase; Provisional	NA|707aa|down_9|NZ_CP012300.1_158633_160754_-	PRK11092, PRK11092, bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
GCF_001280925.1_ASM128092v1	NZ_CP012300	Klebsiella quasipneumoniae strain HKUOPLC chromosome, complete genome	2	1401376-1401464	2	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,WYL,RT	Orphan	GGACTCTCTTTCTCCCTCTCGCT	23	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,WYL,RT	NA,NA|80aa|down_8|NZ_CP012300.1_1409664_1409904_+	NA|349aa|up_9|NZ_CP012300.1_1390195_1391242_+	pfam06674, DUF1176, Protein of unknown function (DUF1176)	NA|665aa|up_8|NZ_CP012300.1_1391231_1393226_-	PRK12753, PRK12753, transketolase; Reviewed	NA|319aa|up_7|NZ_CP012300.1_1393242_1394199_-	PRK12346, PRK12346, transaldolase A; Provisional	NA|760aa|up_6|NZ_CP012300.1_1394493_1396773_+	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed	NA|300aa|up_5|NZ_CP012300.1_1396826_1397726_-	PRK05330, PRK05330, oxygen-dependent coproporphyrinogen oxidase	NA|291aa|up_4|NZ_CP012300.1_1397725_1398598_-	PRK10319, PRK10319, N-acetylmuramoyl-L-alanine amidase AmiA	NA|142aa|up_3|NZ_CP012300.1_1398809_1399235_+	PRK03624, PRK03624, putative acetyltransferase; Provisional	NA|150aa|up_2|NZ_CP012300.1_1399221_1399671_+	pfam11143, DUF2919, Protein of unknown function (DUF2919)	NA|192aa|up_1|NZ_CP012300.1_1399732_1400308_+	PRK10718, PRK10718, RpoE-regulated lipoprotein; Provisional	NA|300aa|up_0|NZ_CP012300.1_1400402_1401302_+	pfam04261, Dyp_perox, Dyp-type peroxidase family	NA|339aa|down_0|NZ_CP012300.1_1402026_1403043_+	PRK10852, PRK10852, thiosulfate ABC transporter substrate-binding protein CysP	NA|278aa|down_1|NZ_CP012300.1_1403042_1403876_+	PRK10971, PRK10971, sulfate/thiosulfate ABC transporter permease CysT	NA|292aa|down_2|NZ_CP012300.1_1403875_1404751_+	PRK11602, cysW, sulfate/thiosulfate ABC transporter permease CysW	NA|365aa|down_3|NZ_CP012300.1_1404740_1405835_+	PRK10851, PRK10851, sulfate/thiosulfate ABC transporter ATP-binding protein CysA	NA|304aa|down_4|NZ_CP012300.1_1405953_1406865_+	PRK11761, cysM, cysteine synthase CysM	NA|132aa|down_5|NZ_CP012300.1_1406861_1407257_-	COG4319, COG4319, Ketosteroid isomerase homolog [Function unknown]	NA|433aa|down_6|NZ_CP012300.1_1407420_1408719_-	PRK15481, PRK15481, transcriptional regulatory protein PtsJ; Provisional	NA|289aa|down_7|NZ_CP012300.1_1408801_1409668_+	PRK08176, pdxK, pyridoxine/pyridoxal/pyridoxamine kinase	NA|80aa|down_8|NZ_CP012300.1_1409664_1409904_+	NA	NA|170aa|down_9|NZ_CP012300.1_1409944_1410454_-	PRK09439, PRK09439, PTS system glucose-specific transporter subunit; Provisional
GCF_001280925.1_ASM128092v1	NZ_CP012300	Klebsiella quasipneumoniae strain HKUOPLC chromosome, complete genome	3	1632655-1632806	3	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,WYL,RT	Orphan	GGTTCGCCCCCTTCGTAGGCCCGGCAAGCGCAGCGCCGCCGGGTAATC	48	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,WYL,RT	NA,NA	NA|311aa|up_9|NZ_CP012300.1_1620718_1621651_+	PRK10550, PRK10550, tRNA dihydrouridine(16) synthase DusC	NA|455aa|up_8|NZ_CP012300.1_1622007_1623372_+	pfam04966, OprB, Carbohydrate-selective porin, OprB family	NA|304aa|up_7|NZ_CP012300.1_1623449_1624361_+	PRK09772, PRK09772, transcriptional antiterminator BglG; Provisional	NA|621aa|up_6|NZ_CP012300.1_1624501_1626364_+	PRK09824, PRK09824, PTS system beta-glucoside-specific transporter subunits IIABC; Provisional	NA|465aa|up_5|NZ_CP012300.1_1626379_1627774_+	PRK09852, PRK09852, cryptic 6-phospho-beta-glucosidase; Provisional	NA|245aa|up_4|NZ_CP012300.1_1627807_1628542_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|480aa|up_3|NZ_CP012300.1_1628670_1630110_+	PRK11459, PRK11459, multidrug resistance outer membrane protein MdtQ; Provisional	NA|190aa|up_2|NZ_CP012300.1_1630143_1630713_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|196aa|up_1|NZ_CP012300.1_1630866_1631454_+	pfam06930, DUF1282, Protein of unknown function (DUF1282)	NA|317aa|up_0|NZ_CP012300.1_1631642_1632593_+	PRK11669, pbpG, D-alanyl-D-alanine endopeptidase; Provisional	NA|185aa|down_0|NZ_CP012300.1_1632915_1633470_-	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]	NA|582aa|down_1|NZ_CP012300.1_1633555_1635301_-	PRK11183, PRK11183, D-lactate dehydrogenase; Provisional	NA|766aa|down_2|NZ_CP012300.1_1635495_1637793_+	PRK15098, PRK15098, beta-glucosidase BglX	NA|306aa|down_3|NZ_CP012300.1_1637929_1638847_+	cd13616, PBP2_OsmF, Substrate-binding domain OsmF of an osmoregulated ABC-type transporter; the type 2 periplasmic-binding protein fold	NA|386aa|down_4|NZ_CP012300.1_1638854_1640012_+	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism]	NA|316aa|down_5|NZ_CP012300.1_1640004_1640952_+	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]	NA|246aa|down_6|NZ_CP012300.1_1640935_1641673_+	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism]	NA|38aa|down_7|NZ_CP012300.1_1641647_1641761_-	PRK13681, PRK13681, protein YohO	NA|563aa|down_8|NZ_CP012300.1_1641990_1643679_+	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms]	NA|240aa|down_9|NZ_CP012300.1_1643672_1644392_+	PRK11697, PRK11697, two-component system response regulator BtsR
GCF_001280925.1_ASM128092v1	NZ_CP012300	Klebsiella quasipneumoniae strain HKUOPLC chromosome, complete genome	4	4391678-4391802	4	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,WYL,RT	Orphan	GTTTGCTCCCTCTCCCACCGGGAGAGGGCCGGGGTGAGGGCAA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,WYL,RT	NA,NA	NA|453aa|up_9|NZ_CP012300.1_4381034_4382393_-	PRK11715, PRK11715, cell envelope integrity protein CreD	NA|475aa|up_8|NZ_CP012300.1_4382452_4383877_-	PRK11100, PRK11100, sensory histidine kinase CreC; Provisional	NA|230aa|up_7|NZ_CP012300.1_4383876_4384566_-	PRK11083, PRK11083, DNA-binding response regulator CreB; Provisional	NA|158aa|up_6|NZ_CP012300.1_4384578_4385052_-	PRK10756, PRK10756, protein CreA	NA|290aa|up_5|NZ_CP012300.1_4385261_4386131_+	PRK15121, PRK15121, MDR efflux pump AcrAB transcriptional activator RobA	NA|216aa|up_4|NZ_CP012300.1_4386127_4386775_-	PRK03482, PRK03482, phosphoglycerate mutase GpmB	NA|172aa|up_3|NZ_CP012300.1_4386888_4387404_+	PRK05074, PRK05074, non-canonical purine NTP phosphatase	NA|110aa|up_2|NZ_CP012300.1_4387390_4387720_-	PRK01381, PRK01381, trp operon repressor	NA|646aa|up_1|NZ_CP012300.1_4387808_4389746_-	PRK11619, PRK11619, lytic murein transglycosylase; Provisional	NA|556aa|up_0|NZ_CP012300.1_4389974_4391642_+	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed	NA|411aa|down_0|NZ_CP012300.1_4391817_4393050_-	PRK08099, PRK08099, multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR	NA|461aa|down_1|NZ_CP012300.1_4393071_4394454_-	TIGR00416, DNA_repair_protein_RadA_homolog, DNA repair protein RadA	NA|324aa|down_2|NZ_CP012300.1_4394463_4395435_-	PRK11133, serB, phosphoserine phosphatase; Provisional	NA|216aa|down_3|NZ_CP012300.1_4395539_4396187_+	PRK11246, PRK11246, YtjB family periplasmic protein	NA|339aa|down_4|NZ_CP012300.1_4396186_4397203_+	PRK03822, lplA, lipoate-protein ligase A; Provisional	NA|240aa|down_5|NZ_CP012300.1_4397292_4398012_-	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|408aa|down_6|NZ_CP012300.1_4398115_4399339_-	PRK05362, PRK05362, phosphopentomutase; Provisional	NA|441aa|down_7|NZ_CP012300.1_4399391_4400714_-	PRK05820, deoA, thymidine phosphorylase; Reviewed	NA|260aa|down_8|NZ_CP012300.1_4400823_4401603_-	PRK05283, PRK05283, deoxyribose-phosphate aldolase; Provisional	NA|426aa|down_9|NZ_CP012300.1_4402018_4403296_-	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism]
GCF_001280925.1_ASM128092v1	NZ_CP012300	Klebsiella quasipneumoniae strain HKUOPLC chromosome, complete genome	5	4629563-4629680	5	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,WYL,RT	Orphan	GTAGCCCGGATAAGGCGCCAGCCGCTATCCGG	32	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,WYL,RT	NA,NA	NA|578aa|up_9|NZ_CP012300.1_4617026_4618760_-	COG0729, COG0729, Outer membrane protein [Cell envelope biogenesis, outer membrane]	NA|213aa|up_8|NZ_CP012300.1_4618969_4619608_+	PRK00058, PRK00058, peptide-methionine (S)-S-oxide reductase MsrA	NA|446aa|up_7|NZ_CP012300.1_4619788_4621126_+	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|411aa|up_6|NZ_CP012300.1_4621326_4622559_+	PRK09528, lacY, galactoside permease; Reviewed	NA|670aa|up_5|NZ_CP012300.1_4622577_4624587_+	pfam02449, Glyco_hydro_42, Beta-galactosidase	NA|291aa|up_4|NZ_CP012300.1_4624617_4625490_+	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|69aa|up_3|NZ_CP012300.1_4625551_4625758_-	pfam06526, DUF1107, Protein of unknown function (DUF1107)	NA|186aa|up_2|NZ_CP012300.1_4626082_4626640_+	COG3054, COG3054, Predicted transcriptional regulator [General function prediction only]	NA|248aa|up_1|NZ_CP012300.1_4626629_4627373_-	PRK10931, PRK10931, adenosine-3'(2'),5'-bisphosphate nucleotidase; Provisional	NA|648aa|up_0|NZ_CP012300.1_4627564_4629508_+	PRK09420, cpdB, bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase	NA|124aa|down_0|NZ_CP012300.1_4629734_4630106_-	pfam01638, HxlR, HxlR-like helix-turn-helix	NA|283aa|down_1|NZ_CP012300.1_4630196_4631045_+	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs	NA|275aa|down_2|NZ_CP012300.1_4631123_4631948_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|324aa|down_3|NZ_CP012300.1_4632023_4632995_+	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|221aa|down_4|NZ_CP012300.1_4633077_4633740_+	PRK10992, PRK10992, iron-sulfur cluster repair protein YtfE	NA|468aa|down_5|NZ_CP012300.1_4633844_4635248_-	PRK11049, PRK11049, D-alanine/D-serine/glycine permease; Provisional	NA|207aa|down_6|NZ_CP012300.1_4635553_4636174_-	PRK11570, PRK11570, peptidyl-prolyl cis-trans isomerase; Provisional	NA|225aa|down_7|NZ_CP012300.1_4636393_4637068_+	COG3061, OapA, Cell envelope opacity-associated protein A [Cell envelope biogenesis, outer membrane]	NA|150aa|down_8|NZ_CP012300.1_4637176_4637626_-	PRK00137, rplI, 50S ribosomal protein L9; Reviewed	NA|76aa|down_9|NZ_CP012300.1_4637667_4637895_-	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed
