assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001277895.1_ASM127789v1	NZ_CP012518	Burkholderia pseudomallei strain vgh16W chromosome 2, complete sequence	1	1445246-1445410	1	PILER-CR	no		cas3,DinG,csa3	Orphan	GCGAGCGCGGCGAGCGCGGCCGCG	24	0	0	NA	NA	NA	2	2	Orphan	WYL,DEDDh,DinG,csa3,cas3	NA,NA|136aa|down_1|NZ_CP012518.1_1448943_1449351_-,NA|84aa|down_3|NZ_CP012518.1_1450538_1450790_-,NA|83aa|down_6|NZ_CP012518.1_1454268_1454517_-	NA|235aa|up_9|NZ_CP012518.1_1433462_1434167_-	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|338aa|up_8|NZ_CP012518.1_1434348_1435362_-	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|174aa|up_7|NZ_CP012518.1_1436210_1436732_+	PRK12511, PRK12511, RNA polymerase sigma factor; Provisional	NA|275aa|up_6|NZ_CP012518.1_1436728_1437553_+	COG5662, COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) [Transcription]	NA|329aa|up_5|NZ_CP012518.1_1437621_1438608_+	pfam04264, YceI, YceI-like domain	NA|120aa|up_4|NZ_CP012518.1_1438647_1439007_+	COG4315, COG4315, Uncharacterized protein conserved in bacteria [Function unknown]	NA|170aa|up_3|NZ_CP012518.1_1439496_1440006_+	PRK12528, PRK12528, RNA polymerase sigma factor; Provisional	NA|335aa|up_2|NZ_CP012518.1_1440002_1441007_+	PRK09774, PRK09774, fec operon regulator FecR; Reviewed	NA|882aa|up_1|NZ_CP012518.1_1441133_1443779_+	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor	NA|327aa|up_0|NZ_CP012518.1_1443989_1444970_-	cd06579, TM_PBP1_transp_AraH_like, Transmembrane subunit (TM) of Escherichia coli AraH and related proteins	NA|337aa|down_0|NZ_CP012518.1_1447805_1448816_-	cd06305, PBP1_methylthioribose_binding-like, similar to methylthioribose-binding protein of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily	NA|136aa|down_1|NZ_CP012518.1_1448943_1449351_-	NA	NA|231aa|down_2|NZ_CP012518.1_1449523_1450216_+	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones]	NA|84aa|down_3|NZ_CP012518.1_1450538_1450790_-	NA	NA|420aa|down_4|NZ_CP012518.1_1450952_1452212_-	cd01163, DszC, Dibenzothiophene (DBT) desulfurization enzyme C	NA|490aa|down_5|NZ_CP012518.1_1452415_1453885_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|83aa|down_6|NZ_CP012518.1_1454268_1454517_-	NA	NA|91aa|down_7|NZ_CP012518.1_1455158_1455431_+	pfam13663, DUF4148, Domain of unknown function (DUF4148)	NA|465aa|down_8|NZ_CP012518.1_1455534_1456929_-	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase	NA|230aa|down_9|NZ_CP012518.1_1456925_1457615_-	TIGR01387, Transcriptional_regulatory_protein_PcoR, heavy metal response regulator
GCF_001277895.1_ASM127789v1	NZ_CP012518	Burkholderia pseudomallei strain vgh16W chromosome 2, complete sequence	2	2678286-2678378	1	CRISPRCasFinder	no		cas3,DinG,csa3	Orphan	GCGCGTCGGCGCGCGCGGCGGCGA	24	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,DinG,csa3,cas3	NA|170aa|up_4|NZ_CP012518.1_2672635_2673145_+,NA|168aa|up_3|NZ_CP012518.1_2673202_2673706_-,NA|86aa|down_6|NZ_CP012518.1_2682358_2682616_+	NA|358aa|up_9|NZ_CP012518.1_2662716_2663790_+	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional	NA|1092aa|up_8|NZ_CP012518.1_2663786_2667062_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|375aa|up_7|NZ_CP012518.1_2667064_2668189_+	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]	NA|612aa|up_6|NZ_CP012518.1_2668338_2670174_+	PRK13557, PRK13557, histidine kinase; Provisional	NA|522aa|up_5|NZ_CP012518.1_2670529_2672095_-	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional	NA|170aa|up_4|NZ_CP012518.1_2672635_2673145_+	NA	NA|168aa|up_3|NZ_CP012518.1_2673202_2673706_-	NA	NA|342aa|up_2|NZ_CP012518.1_2673782_2674808_-	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)	NA|283aa|up_1|NZ_CP012518.1_2675022_2675871_-	pfam00231, ATP-synt, ATP synthase	NA|661aa|up_0|NZ_CP012518.1_2675867_2677850_-	PRK13343, PRK13343, F0F1 ATP synthase subunit alpha; Provisional	NA|83aa|down_0|NZ_CP012518.1_2678596_2678845_-	PRK13468, PRK13468, F0F1 ATP synthase subunit C; Provisional	NA|234aa|down_1|NZ_CP012518.1_2678841_2679543_-	PRK13421, PRK13421, F0F1 ATP synthase subunit A; Provisional	NA|103aa|down_2|NZ_CP012518.1_2679539_2679848_-	TIGR03165, F1F0_chp_2, F1/F0 ATPase, Methanosarcina type, subunit 2	NA|167aa|down_3|NZ_CP012518.1_2679840_2680341_-	pfam09527, ATPase_gene1, Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter	NA|152aa|down_4|NZ_CP012518.1_2680337_2680793_-	PRK13447, PRK13447, F0F1 ATP synthase subunit epsilon; Provisional	NA|535aa|down_5|NZ_CP012518.1_2680782_2682387_-	PRK12597, PRK12597, F0F1 ATP synthase subunit beta; Provisional	NA|86aa|down_6|NZ_CP012518.1_2682358_2682616_+	NA	NA|598aa|down_7|NZ_CP012518.1_2682747_2684541_+	TIGR01838, Poly-beta-hydroxybutyrate_polymerase, poly(R)-hydroxyalkanoic acid synthase, class I	NA|468aa|down_8|NZ_CP012518.1_2684551_2685955_+	PRK08190, PRK08190, bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated	NA|393aa|down_9|NZ_CP012518.1_2685951_2687130_+	PRK07058, PRK07058, acetate/propionate family kinase
GCF_001277895.1_ASM127789v1	NZ_CP012518	Burkholderia pseudomallei strain vgh16W chromosome 2, complete sequence	3	3118822-3118967	2,2	PILER-CR,CRISPRCasFinder	no		cas3,DinG,csa3	Orphan	GCAGAGGCGCCGCCGCCGGAATACCCGATCATCGGGATGCTCGATCGCCGAAG,CGGAATGCCCGATCATCGGGATGC	53,24	0	0	NA	NA	NA:NA	2,1	2	Orphan	WYL,DEDDh,DinG,csa3,cas3	NA|197aa|up_3|NZ_CP012518.1_3112549_3113140_+,NA|111aa|down_5|NZ_CP012518.1_3128276_3128609_-	NA|484aa|up_9|NZ_CP012518.1_3104456_3105908_-	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed	NA|348aa|up_8|NZ_CP012518.1_3105909_3106953_-	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|411aa|up_7|NZ_CP012518.1_3106958_3108191_-	COG1071, AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion]	NA|147aa|up_6|NZ_CP012518.1_3109443_3109884_+	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|372aa|up_5|NZ_CP012518.1_3110185_3111301_-	pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport	NA|312aa|up_4|NZ_CP012518.1_3111598_3112534_+	cd08417, PBP2_Nitroaromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold	NA|197aa|up_3|NZ_CP012518.1_3112549_3113140_+	NA	NA|633aa|up_2|NZ_CP012518.1_3113199_3115098_+	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	NA|758aa|up_1|NZ_CP012518.1_3115387_3117661_-	pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase	NA|132aa|up_0|NZ_CP012518.1_3117793_3118189_-	COG1734, DksA, DnaK suppressor protein [Signal transduction mechanisms]	NA|422aa|down_0|NZ_CP012518.1_3119524_3120790_+	TIGR01849, unnamed_protein_product, polyhydroxyalkanoate depolymerase, intracellular	NA|614aa|down_1|NZ_CP012518.1_3121048_3122890_+	PRK06948, PRK06948, ribonucleotide reductase-like protein; Provisional	NA|604aa|down_2|NZ_CP012518.1_3122964_3124776_+	COG2187, COG2187, Uncharacterized protein conserved in bacteria [Function unknown]	NA|344aa|down_3|NZ_CP012518.1_3125294_3126326_+	PRK07877, PRK07877, Rv1355c family protein	NA|611aa|down_4|NZ_CP012518.1_3126322_3128155_+	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	NA|111aa|down_5|NZ_CP012518.1_3128276_3128609_-	NA	NA|150aa|down_6|NZ_CP012518.1_3128604_3129054_-	cd17775, CBS_pair_bact_arch, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains  present in bacteria and archaea	NA|218aa|down_7|NZ_CP012518.1_3129507_3130161_+	cd02142, McbC_SagB-like_oxidoreductase, oxidase similar to the microcin B17 processing protein McbC	NA|145aa|down_8|NZ_CP012518.1_3130228_3130663_-	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]	NA|377aa|down_9|NZ_CP012518.1_3131068_3132199_-	cd00342, gram_neg_porins, Porins form aqueous channels for the diffusion of small hydrophillic molecules across the outer membrane
GCF_001277895.1_ASM127789v1	NZ_CP012517	Burkholderia pseudomallei strain vgh16W chromosome 1, complete sequence	1	2193931-2194290	1	CRT	no		WYL,DEDDh,DinG,csa3,cas3	Orphan	CCGATGCGGTCGNGTNCGTGCCNN	24	5	7	2194033-2194062|2194081-2194098|2194159-2194188|2194159-2194188|2194207-2194230|2194207-2194230|2194249-2194272	NZ_CP012517.1_2194285-2194314|NZ_CP012517.1_2194417-2194434|NZ_CP012517.1_2193907-2193936|NZ_CP012517.1_2194411-2194440|NZ_CP012517.1_2194333-2194356|NZ_CP012517.1_2194543-2194566|NZ_CP012517.1_2194375-2194398	NA	8	8	Orphan	WYL,DEDDh,DinG,csa3,cas3	NA|128aa|up_0|NZ_CP012517.1_2191213_2191597_-,NA|84aa|down_0|NZ_CP012517.1_2196003_2196255_-,NA|257aa|down_7|NZ_CP012517.1_2205532_2206303_-,NA|173aa|down_8|NZ_CP012517.1_2208479_2208998_-,NA|233aa|down_9|NZ_CP012517.1_2209045_2209744_+	NA|196aa|up_9|NZ_CP012517.1_2179824_2180412_-	pfam06684, AA_synth, Amino acid synthesis	NA|233aa|up_8|NZ_CP012517.1_2180709_2181408_-	COG1802, GntR, Transcriptional regulators [Transcription]	NA|102aa|up_7|NZ_CP012517.1_2182205_2182511_-	pfam11876, DUF3396, Protein of unknown function (DUF3396)	NA|357aa|up_6|NZ_CP012517.1_2182926_2183997_+	cd00519, Lipase_3, Lipase (class 3)	NA|103aa|up_5|NZ_CP012517.1_2184253_2184562_-	pfam00816, Histone_HNS, H-NS histone family	NA|119aa|up_4|NZ_CP012517.1_2184656_2185013_-	PRK09935, PRK09935, fimbriae biosynthesis transcriptional regulator FimZ	NA|265aa|up_3|NZ_CP012517.1_2185892_2186687_-	pfam00563, EAL, EAL domain	NA|1083aa|up_2|NZ_CP012517.1_2187013_2190262_-	PRK10841, PRK10841, two-component system sensor histidine kinase RcsC	NA|222aa|up_1|NZ_CP012517.1_2190261_2190927_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|128aa|up_0|NZ_CP012517.1_2191213_2191597_-	NA	NA|84aa|down_0|NZ_CP012517.1_2196003_2196255_-	NA	NA|324aa|down_1|NZ_CP012517.1_2197031_2198003_-	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|834aa|down_2|NZ_CP012517.1_2197993_2200495_-	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion]	NA|257aa|down_3|NZ_CP012517.1_2200552_2201323_-	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion]	NA|177aa|down_4|NZ_CP012517.1_2201421_2201952_-	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|156aa|down_5|NZ_CP012517.1_2203106_2203574_-	pfam08670, MEKHLA, MEKHLA domain	NA|363aa|down_6|NZ_CP012517.1_2204158_2205247_+	pfam10503, Esterase_phd, Esterase PHB depolymerase	NA|257aa|down_7|NZ_CP012517.1_2205532_2206303_-	NA	NA|173aa|down_8|NZ_CP012517.1_2208479_2208998_-	NA	NA|233aa|down_9|NZ_CP012517.1_2209045_2209744_+	NA
GCF_001277895.1_ASM127789v1	NZ_CP012517	Burkholderia pseudomallei strain vgh16W chromosome 1, complete sequence	2	3998391-3998800	2	CRT	no		WYL,DEDDh,DinG,csa3,cas3	Orphan	GAGTCAGCGCTTCAGCGCTT	20	0	0	NA	NA	NA	8	8	Orphan	WYL,DEDDh,DinG,csa3,cas3	NA|59aa|up_7|NZ_CP012517.1_3989767_3989944_+,NA|65aa|up_1|NZ_CP012517.1_3995811_3996006_-,NA	NA|380aa|up_9|NZ_CP012517.1_3984601_3985741_-	cd06342, PBP1_ABC_LIVBP-like, type 1 periplasmic ligand-binding domain of ABC (Atpase Binding Cassette)-type active transport systems involved in the transport of all three branched chain aliphatic amino acids (leucine, isoleucine and valine)	NA|1310aa|up_8|NZ_CP012517.1_3985825_3989755_-	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|59aa|up_7|NZ_CP012517.1_3989767_3989944_+	NA	NA|756aa|up_6|NZ_CP012517.1_3990219_3992487_-	PRK05580, PRK05580, primosome assembly protein PriA; Validated	NA|365aa|up_5|NZ_CP012517.1_3992927_3994022_-	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated	NA|262aa|up_4|NZ_CP012517.1_3994161_3994947_+	cd01069, PBP2_PheC, Cyclohexadienyl dehydratase, a member of the type 2 periplasmic binding fold protein superfamily	NA|114aa|up_3|NZ_CP012517.1_3995146_3995488_-	COG1832, COG1832, Predicted CoA-binding protein [General function prediction only]	NA|45aa|up_2|NZ_CP012517.1_3995453_3995588_-	COG1832, COG1832, Predicted CoA-binding protein [General function prediction only]	NA|65aa|up_1|NZ_CP012517.1_3995811_3996006_-	NA	NA|577aa|up_0|NZ_CP012517.1_3996047_3997778_-	PRK08315, PRK08315, AMP-binding domain protein; Validated	NA|465aa|down_0|NZ_CP012517.1_3998957_4000352_-	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated	NA|292aa|down_1|NZ_CP012517.1_4000431_4001307_-	PRK05621, PRK05621, F0F1 ATP synthase subunit gamma; Validated	NA|514aa|down_2|NZ_CP012517.1_4001378_4002920_-	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated	NA|180aa|down_3|NZ_CP012517.1_4002966_4003506_-	PRK05758, PRK05758, F0F1 ATP synthase subunit delta; Validated	NA|157aa|down_4|NZ_CP012517.1_4003508_4003979_-	PRK05759, PRK05759, F0F1 ATP synthase subunit B; Validated	NA|90aa|down_5|NZ_CP012517.1_4004106_4004376_-	PRK06876, PRK06876, F0F1 ATP synthase subunit C; Validated	NA|284aa|down_6|NZ_CP012517.1_4004452_4005304_-	PRK05815, PRK05815, F0F1 ATP synthase subunit A; Validated	NA|177aa|down_7|NZ_CP012517.1_4005416_4005947_-	pfam03899, ATP-synt_I, ATP synthase I chain	NA|378aa|down_8|NZ_CP012517.1_4006217_4007351_-	cd01117, YbiR_permease, Putative anion permease YbiR	NA|296aa|down_9|NZ_CP012517.1_4007358_4008246_-	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein
