assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001262715.1_ASM126271v1	NZ_CP012328	Spiroplasma turonicum strain Tab4c chromosome, complete genome	1	408353-408517	1	CRISPRCasFinder	no		DEDDh,cas2,cas1,cas9	Orphan	ATGCAACAACCTCAACCAATTCAACAA	27	0	0	NA	NA	NA	2	2	Orphan	DEDDh,cas2,cas1,cas9	NA|133aa|up_8|NZ_CP012328.1_396243_396642_+,NA|272aa|down_0|NZ_CP012328.1_408852_409668_+,NA|236aa|down_4|NZ_CP012328.1_413848_414556_+,NA|484aa|down_5|NZ_CP012328.1_414597_416049_+,NA|345aa|down_7|NZ_CP012328.1_420151_421186_+	NA|513aa|up_9|NZ_CP012328.1_394623_396162_+	cd09008, MTAN, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidases	NA|133aa|up_8|NZ_CP012328.1_396243_396642_+	NA	NA|541aa|up_7|NZ_CP012328.1_396667_398290_+	COG1284, COG1284, Uncharacterized conserved protein [Function unknown]	NA|93aa|up_6|NZ_CP012328.1_398363_398642_+	pfam06394, Pepsin-I3, Pepsin inhibitor-3-like repeated domain	NA|1235aa|up_5|NZ_CP012328.1_398652_402357_+	TIGR00916, Protein_translocase_subunit_SecF, protein-export membrane protein, SecD/SecF family	NA|171aa|up_4|NZ_CP012328.1_402367_402880_+	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional	NA|776aa|up_3|NZ_CP012328.1_403001_405329_+	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]	NA|121aa|up_2|NZ_CP012328.1_405344_405707_+	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB	NA|330aa|up_1|NZ_CP012328.1_405772_406762_+	cd19078, AKR_AKR13C1_2, AKR13C family of aldo-keto reductase (AKR)	NA|388aa|up_0|NZ_CP012328.1_406906_408070_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|272aa|down_0|NZ_CP012328.1_408852_409668_+	NA	NA|235aa|down_1|NZ_CP012328.1_409790_410495_+	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|314aa|down_2|NZ_CP012328.1_410498_411440_+	cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases	NA|760aa|down_3|NZ_CP012328.1_411452_413732_+	PRK09765, PRK09765, PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional	NA|236aa|down_4|NZ_CP012328.1_413848_414556_+	NA	NA|484aa|down_5|NZ_CP012328.1_414597_416049_+	NA	NA|1364aa|down_6|NZ_CP012328.1_416058_420150_+	pfam02687, FtsX, FtsX-like permease family	NA|345aa|down_7|NZ_CP012328.1_420151_421186_+	NA	NA|192aa|down_8|NZ_CP012328.1_421287_421863_+	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others	NA|412aa|down_9|NZ_CP012328.1_421884_423120_+	TIGR00442, hisS, histidyl-tRNA synthetase
GCF_001262715.1_ASM126271v1	NZ_CP012328	Spiroplasma turonicum strain Tab4c chromosome, complete genome	2	738153-741093	2,1,1,2,3	CRISPRCasFinder,CRT,PILER-CR,PILER-CR,PILER-CR	no	cas2,cas1,cas9	DEDDh,cas2,cas1,cas9	 Type II-B,Type II-A,Type II-C,Type II-B, or Type II-C?	GTTCTACTACTACATAATTTTACAGGGTACCATAAC,GTTCTACTACTACATAATTTTACAGGGTACCATAAC,GTTCTACTACTACATAATTTTACAGGGTACCATAAC,GTTCTACTACTACATAATTTTACAGGGTACCATAAC,GTTCTACTACTACATAATTTTACAGGGTACCATAAC	36,36,36,36,36	0	0	NA	NA	NA:NA:NA:NA:NA	44,44,38,38,38	44	TypeII-B,TypeII-A,TypeII-C,TypeII-B,orTypeII-C?	DEDDh,cas2,cas1,cas9	NA|204aa|up_6|NZ_CP012328.1_729290_729902_-,NA|57aa|up_4|NZ_CP012328.1_732076_732247_-,NA|62aa|up_3|NZ_CP012328.1_732312_732498_-,NA|310aa|down_0|NZ_CP012328.1_741120_742050_-,NA|118aa|down_5|NZ_CP012328.1_747211_747565_-,NA|49aa|down_6|NZ_CP012328.1_747809_747956_-,NA|247aa|down_7|NZ_CP012328.1_748678_749419_-,NA|79aa|down_8|NZ_CP012328.1_750061_750298_+,NA|72aa|down_9|NZ_CP012328.1_750528_750744_+	NA|484aa|up_9|NZ_CP012328.1_719607_721059_-	cd18623, GH32_ScrB-like, glycoside hydrolase family 32 sucrose 6 phosphate hydrolase (sucrase)	NA|534aa|up_8|NZ_CP012328.1_721062_722664_-	TIGR01992, phosphotransferase_system_trehalose_permease, PTS system, trehalose-specific IIBC component	NA|844aa|up_7|NZ_CP012328.1_724876_727408_-	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component	NA|204aa|up_6|NZ_CP012328.1_729290_729902_-	NA	NA|556aa|up_5|NZ_CP012328.1_729891_731559_-	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system	NA|57aa|up_4|NZ_CP012328.1_732076_732247_-	NA	NA|62aa|up_3|NZ_CP012328.1_732312_732498_-	NA	NA|489aa|up_2|NZ_CP012328.1_733294_734761_-	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]	NA|842aa|up_1|NZ_CP012328.1_734763_737289_-	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component	NA|233aa|up_0|NZ_CP012328.1_737369_738068_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|310aa|down_0|NZ_CP012328.1_741120_742050_-	NA	cas2|103aa|down_1|NZ_CP012328.1_742049_742358_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|302aa|down_2|NZ_CP012328.1_742362_743268_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1071aa|down_3|NZ_CP012328.1_743391_746604_-	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9	NA|84aa|down_4|NZ_CP012328.1_746700_746952_-	pfam00665, rve, Integrase core domain	NA|118aa|down_5|NZ_CP012328.1_747211_747565_-	NA	NA|49aa|down_6|NZ_CP012328.1_747809_747956_-	NA	NA|247aa|down_7|NZ_CP012328.1_748678_749419_-	NA	NA|79aa|down_8|NZ_CP012328.1_750061_750298_+	NA	NA|72aa|down_9|NZ_CP012328.1_750528_750744_+	NA
GCF_001262715.1_ASM126271v1	NZ_CP012328	Spiroplasma turonicum strain Tab4c chromosome, complete genome	3	958807-958900	3	CRISPRCasFinder	no		DEDDh,cas2,cas1,cas9	Orphan	TAGTTGTTTTTTTAGCTACTGTTTTTTT	28	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas2,cas1,cas9	NA|164aa|up_8|NZ_CP012328.1_953015_953507_-,NA|115aa|up_5|NZ_CP012328.1_955644_955989_-,NA|91aa|up_0|NZ_CP012328.1_958514_958787_-,NA|240aa|down_0|NZ_CP012328.1_959802_960522_-,NA|87aa|down_1|NZ_CP012328.1_960523_960784_-,NA|533aa|down_2|NZ_CP012328.1_960926_962525_-,NA|102aa|down_6|NZ_CP012328.1_966787_967093_-	NA|308aa|up_9|NZ_CP012328.1_951887_952811_-	PRK07259, PRK07259, dihydroorotate dehydrogenase	NA|164aa|up_8|NZ_CP012328.1_953015_953507_-	NA	NA|250aa|up_7|NZ_CP012328.1_953574_954324_-	cd00553, NAD_synthase, NAD+ synthase is a homodimer, which catalyzes the final step in de novo nicotinamide adenine dinucleotide (NAD+) biosynthesis, an amide transfer from either ammonia or glutamine to nicotinic acid adenine dinucleotide (NaAD)	NA|432aa|up_6|NZ_CP012328.1_954327_955623_-	PRK12297, obgE, GTPase CgtA; Reviewed	NA|115aa|up_5|NZ_CP012328.1_955644_955989_-	NA	NA|248aa|up_4|NZ_CP012328.1_955991_956735_-	pfam11428, DUF3196, Protein of unknown function (DUF3196)	NA|153aa|up_3|NZ_CP012328.1_956842_957301_-	PRK05338, rplS, 50S ribosomal protein L19; Provisional	NA|244aa|up_2|NZ_CP012328.1_957302_958034_-	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed	NA|164aa|up_1|NZ_CP012328.1_958033_958525_-	TIGR02273, Ribosome_maturation_factor_RimM, 16S rRNA processing protein RimM	NA|91aa|up_0|NZ_CP012328.1_958514_958787_-	NA	NA|240aa|down_0|NZ_CP012328.1_959802_960522_-	NA	NA|87aa|down_1|NZ_CP012328.1_960523_960784_-	NA	NA|533aa|down_2|NZ_CP012328.1_960926_962525_-	NA	NA|442aa|down_3|NZ_CP012328.1_962533_963859_-	PRK05335, PRK05335, tRNA (uracil-5-)-methyltransferase Gid; Reviewed	NA|648aa|down_4|NZ_CP012328.1_963905_965849_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|247aa|down_5|NZ_CP012328.1_966047_966788_-	COG0758, Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion]	NA|102aa|down_6|NZ_CP012328.1_966787_967093_-	NA	NA|561aa|down_7|NZ_CP012328.1_967190_968873_-	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1)	NA|320aa|down_8|NZ_CP012328.1_969487_970447_-	TIGR03596, GTPase_YlqF, ribosome biogenesis GTP-binding protein YlqF	NA|155aa|down_9|NZ_CP012328.1_970455_970920_-	pfam02590, SPOUT_MTase, Predicted SPOUT methyltransferase
GCF_001262715.1_ASM126271v1	NZ_CP012328	Spiroplasma turonicum strain Tab4c chromosome, complete genome	4	1033989-1034373	2	CRT	no		DEDDh,cas2,cas1,cas9	Orphan	TNTTTTNGNNNCTGTTTCTTTTTTTTCA	28	0	0	NA	NA	NA	5	5	Orphan	DEDDh,cas2,cas1,cas9	NA|539aa|up_9|NZ_CP012328.1_1025962_1027579_-,NA|122aa|down_6|NZ_CP012328.1_1043645_1044011_-,NA|110aa|down_9|NZ_CP012328.1_1045925_1046255_-	NA|539aa|up_9|NZ_CP012328.1_1025962_1027579_-	NA	NA|183aa|up_8|NZ_CP012328.1_1027685_1028234_-	PRK00083, frr, ribosome recycling factor; Reviewed	NA|238aa|up_7|NZ_CP012328.1_1028245_1028959_-	cd04254, AAK_UMPK-PyrH-Ec, UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway)	NA|260aa|up_6|NZ_CP012328.1_1029122_1029902_-	pfam04791, LMBR1, LMBR1-like membrane protein	NA|292aa|up_5|NZ_CP012328.1_1029903_1030779_-	PRK09377, tsf, elongation factor Ts; Provisional	NA|291aa|up_4|NZ_CP012328.1_1030778_1031651_-	PRK05299, rpsB, 30S ribosomal protein S2; Provisional	NA|174aa|up_3|NZ_CP012328.1_1031873_1032395_-	cd01055, Nonheme_Ferritin, nonheme-containing ferritins	NA|103aa|up_2|NZ_CP012328.1_1032465_1032774_-	TIGR02349, Chaperone_protein_DnaJ, chaperone protein DnaJ	NA|94aa|up_1|NZ_CP012328.1_1033373_1033655_-	PRK05435, rpmA, 50S ribosomal protein L27; Validated	NA|105aa|up_0|NZ_CP012328.1_1033656_1033971_-	cd16332, Prp-like, ribosomal-processing cysteine protease Prp and similar proteins	NA|291aa|down_0|NZ_CP012328.1_1035209_1036082_-	cd11648, RsmI, Ribosomal RNA small subunit methyltransferase I (RsmI), also known as rRNA (cytidine-2'-O-)-methyltransferase	NA|158aa|down_1|NZ_CP012328.1_1036121_1036595_-	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|588aa|down_2|NZ_CP012328.1_1036636_1038400_-	PRK00558, uvrC, excinuclease ABC subunit UvrC	NA|980aa|down_3|NZ_CP012328.1_1038447_1041387_-	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning]	NA|573aa|down_4|NZ_CP012328.1_1041467_1043186_-	COG0595, COG0595, mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair]	NA|100aa|down_5|NZ_CP012328.1_1043353_1043653_+	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|122aa|down_6|NZ_CP012328.1_1043645_1044011_-	NA	NA|269aa|down_7|NZ_CP012328.1_1044010_1044817_-	PRK04885, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional	NA|339aa|down_8|NZ_CP012328.1_1044906_1045923_+	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|110aa|down_9|NZ_CP012328.1_1045925_1046255_-	NA
