The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP012196	Campylobacter gracilis strain ATCC 33236 chromosome, complete genome	2281652	214865	224373	2281652	integrase	Clostridium_phage(14.29%)	18	205052:205066	226077:226091
205052:205066	attL	GATATAAAAGCCGTT	NA	NA	NA	NA
WP_005869967.1|214865_216161_-	hypothetical protein	NA	A0A0A8WEW2	Clostridium_phage	28.9	6.1e-24
WP_005869970.1|216153_216621_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005869972.1|216708_216921_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005869974.1|217083_217377_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005869976.1|217427_218300_+|integrase	site-specific integrase	integrase	M5AAB1	Nitratiruptor_phage	31.1	4.2e-29
WP_005869978.1|218282_218579_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005869980.1|218578_218929_-	DUF1064 domain-containing protein	NA	A0A0U2C0S3	Paracoccus_phage	47.2	6.7e-10
WP_040303535.1|218894_219158_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005869984.1|219157_219460_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005869986.1|219456_220125_-	site-specific DNA-methyltransferase	NA	E1AC06	Pseudoalteromonas_phage	41.6	1.7e-38
WP_005869988.1|220114_220726_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005869990.1|220722_221613_-	helix-turn-helix domain-containing protein	NA	A0A0F7L7L4	uncultured_marine_virus	38.3	5.3e-11
WP_040303539.1|221609_222419_-	phage antirepressor KilAC domain-containing protein	NA	R9VWW9	Paenibacillus_phage	41.4	5.1e-45
WP_005869994.1|222505_222691_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005869999.1|222805_222988_-	LapA family protein	NA	NA	NA	NA	NA
WP_005870001.1|223054_223264_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005870002.1|223244_223499_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005870003.1|223593_224373_+	helix-turn-helix domain-containing protein	NA	A0A125RN35	Pseudomonas_phage	33.8	4.3e-09
226077:226091	attR	AACGGCTTTTATATC	NA	NA	NA	NA
>prophage 2
NZ_CP012196	Campylobacter gracilis strain ATCC 33236 chromosome, complete genome	2281652	562190	631788	2281652	plate,portal,tRNA,protease,tail,capsid,transposase	Campylobacter_phage(30.0%)	80	NA	NA
WP_005872535.1|562190_563519_+|transposase	Mu transposase C-terminal domain-containing protein	transposase	NA	NA	NA	NA
WP_050346304.1|563596_564490_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_005872531.1|564500_564683_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040304121.1|564747_564909_+	ribonucleoside-triphosphate reductase	NA	NA	NA	NA	NA
WP_069435697.1|564999_565221_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005872525.1|565217_565526_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005872523.1|565665_565974_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005872521.1|565993_566764_+	DUF2303 family protein	NA	NA	NA	NA	NA
WP_005872519.1|566828_567179_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005872515.1|567994_568231_+	hypothetical protein	NA	X2KQ78	Campylobacter_phage	57.1	3.4e-10
WP_005872513.1|568442_569126_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005872511.1|569122_569344_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005872510.1|569436_569835_+	DUF1018 domain-containing protein	NA	NA	NA	NA	NA
WP_005872508.1|569834_570020_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005872506.1|570172_571402_+	hypothetical protein	NA	A0A2D2W2A8	Stenotrophomonas_phage	21.5	1.6e-05
WP_005872504.1|571398_571716_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005872502.1|571712_572147_+	HK97 gp10 family phage protein	NA	A0A0K0MWW1	Gordonia_phage	37.5	6.4e-10
WP_143297842.1|572522_573446_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169748462.1|573471_575031_-|transposase	transposase	transposase	A0A1B0T6F0	Thiobacimonas_phage	32.9	2.3e-41
WP_005872496.1|575027_575342_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005872494.1|575351_575678_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005872492.1|575871_576888_-|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	25.2	5.3e-15
WP_005872490.1|577065_577842_+	hypothetical protein	NA	R9QT36	Halovirus	32.1	4.3e-09
WP_100067336.1|577985_578732_+|capsid	phage capsid protein	capsid	NA	NA	NA	NA
WP_005872486.1|578741_579062_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005872484.1|579105_579549_+	glycoside hydrolase family protein	NA	Q5G7N2	Listonella_phage	33.1	5.9e-11
WP_005872482.1|579526_579838_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005872480.1|579803_580025_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005872476.1|580210_580504_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005872475.1|580493_581099_+|plate	phage baseplate assembly protein V	plate	NA	NA	NA	NA
WP_005872473.1|581100_581388_+	GPW/gp25 family protein	NA	Q75QM0	Wolbachia_phage	40.0	8.4e-11
WP_005872471.1|581384_582470_+|plate	baseplate J/gp47 family protein	plate	Q19UQ5	Mannheimia_phage	36.2	1.9e-15
WP_005872469.1|582466_583021_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_005872465.1|583847_584336_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005872463.1|584597_585137_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005872461.1|585257_586421_+|tail	phage tail sheath subtilisin-like domain-containing protein	tail	A7YGH4	Campylobacter_phage	45.2	2.2e-81
WP_005872454.1|586453_586969_+|tail	tail protein	tail	A7YGZ4	Campylobacter_phage	42.6	2.2e-33
WP_005872452.1|586986_587250_+|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_005872445.1|587681_590009_+|tail	phage tail tape measure protein	tail	A7YGZ1	Campylobacter_phage	35.1	2.2e-77
WP_040304114.1|590010_590385_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_005872440.1|590374_590560_+|tail	tail protein	tail	NA	NA	NA	NA
WP_005872438.1|590553_591552_+	hypothetical protein	NA	A0A2H4JBF6	uncultured_Caudovirales_phage	21.2	5.6e-09
WP_005872436.1|591563_591980_+	hypothetical protein	NA	X2KQY5	Campylobacter_phage	33.1	1.2e-10
WP_050346306.1|591982_592795_+	DNA adenine methylase	NA	A7YGG5	Campylobacter_phage	58.0	8.6e-85
WP_005872432.1|592868_593054_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005872429.1|593083_593698_-	recombination protein RecO	NA	NA	NA	NA	NA
WP_005872426.1|593791_594691_+	acetyl-CoA carboxylase carboxyltransferase subunit beta	NA	NA	NA	NA	NA
WP_005872424.1|594690_595143_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_005872423.1|595152_595509_+	RNA polymerase-binding protein DksA	NA	NA	NA	NA	NA
WP_005872422.1|595511_596513_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005872420.1|597053_597980_+|tRNA	tRNA-dihydrouridine synthase	tRNA	NA	NA	NA	NA
WP_005872419.1|597956_598322_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005872418.1|598552_599284_+	metallophosphoesterase	NA	A0A2R4ALY4	Aeromonas_phage	25.1	1.1e-09
WP_005872417.1|599392_600223_-	prephenate dehydrogenase	NA	NA	NA	NA	NA
WP_050346307.1|600304_602560_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_005872411.1|603115_604495_+	M23 family metallopeptidase	NA	NA	NA	NA	NA
WP_005872409.1|604545_605430_+	UDP-3-O-acyl-N-acetylglucosamine deacetylase	NA	NA	NA	NA	NA
WP_040304109.1|605460_605892_+|protease	glycoprotease	protease	NA	NA	NA	NA
WP_005872405.1|605900_606782_+	homoserine kinase	NA	NA	NA	NA	NA
WP_040304108.1|606803_607031_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005872401.1|607014_609723_+	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	25.9	1.8e-30
WP_005872398.1|609797_609965_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005872391.1|610815_611181_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_005872390.1|611173_611593_+	ribosome maturation factor	NA	NA	NA	NA	NA
WP_069435689.1|612311_612566_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005872387.1|613099_614323_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	29.2	1.5e-19
WP_100067335.1|614408_615005_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100067324.1|615657_616326_-	hypothetical protein	NA	NA	NA	NA	NA
WP_050346363.1|616856_617813_-	cation transporter	NA	NA	NA	NA	NA
WP_005872375.1|618904_619279_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_040304253.1|619489_620125_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_005872369.1|621084_621495_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_005872367.1|621653_622985_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_005872365.1|622994_623660_-	ThiF family adenylyltransferase	NA	NA	NA	NA	NA
WP_005872363.1|623656_624832_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA	NA
WP_005872361.1|624841_625027_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_005872360.1|625016_626123_-	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_005872359.1|626119_627571_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.3	2.9e-91
WP_005872358.1|627573_628932_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_005872356.1|629028_631788_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	26.9	7.7e-77
>prophage 3
NZ_CP012196	Campylobacter gracilis strain ATCC 33236 chromosome, complete genome	2281652	1983195	1993198	2281652	tRNA	uncultured_virus(14.29%)	9	NA	NA
WP_005871072.1|1983195_1984527_-	lipopolysaccharide biosynthesis protein RfbH	NA	A0A218MN59	uncultured_virus	36.1	9.2e-68
WP_005871071.1|1984523_1985453_-	NAD(P)-dependent oxidoreductase	NA	M1NML0	Moumouvirus	25.3	1.6e-05
WP_005871070.1|1985449_1986235_-	hypothetical protein	NA	E5ERI3	Ostreococcus_lucimarinus_virus	31.9	6.1e-27
WP_005871069.1|1986236_1986965_-	HAD-IIA family hydrolase	NA	NA	NA	NA	NA
WP_005871068.1|1986957_1988748_-	thiamine pyrophosphate-binding protein	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	37.9	3.0e-98
WP_005871066.1|1988744_1989845_-	CDP-glucose 4,6-dehydratase	NA	J7Q7J8	Aeropyrum_coil-shaped_virus	26.3	6.3e-14
WP_005871064.1|1989848_1990622_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_005871062.1|1990856_1991378_-	translation initiation factor IF-3	NA	A0A1L2CV30	Pectobacterium_phage	29.8	2.5e-13
WP_005871061.1|1991374_1993198_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	37.3	8.1e-115
